Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Stop | 1 |
| Start | 0 |
| Model size | 709 |
| Hectar predicted targeting category | other localisation |
| Exons | 6 |
| Cds size | 561 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1682588865.4068441-CDS-C-australica_Contig_998:148..245 | 1682588865.4068441-CDS-C-australica_Contig_998:148..245 | Chrysoparadoxa australica CS_1217 | CDS | C-australica_Contig_998 149..245 + |
| 1682588865.419809-CDS-C-australica_Contig_998:438..533 | 1682588865.419809-CDS-C-australica_Contig_998:438..533 | Chrysoparadoxa australica CS_1217 | CDS | C-australica_Contig_998 439..533 + |
| 1682588865.4313226-CDS-C-australica_Contig_998:647..677 | 1682588865.4313226-CDS-C-australica_Contig_998:647..677 | Chrysoparadoxa australica CS_1217 | CDS | C-australica_Contig_998 648..677 + |
| 1682588865.4410784-CDS-C-australica_Contig_998:893..974 | 1682588865.4410784-CDS-C-australica_Contig_998:893..974 | Chrysoparadoxa australica CS_1217 | CDS | C-australica_Contig_998 894..974 + |
| 1682588865.4543822-CDS-C-australica_Contig_998:1155..1280 | 1682588865.4543822-CDS-C-australica_Contig_998:1155..1280 | Chrysoparadoxa australica CS_1217 | CDS | C-australica_Contig_998 1156..1280 + |
| 1682588865.4704268-CDS-C-australica_Contig_998:1522..1655 | 1682588865.4704268-CDS-C-australica_Contig_998:1522..1655 | Chrysoparadoxa australica CS_1217 | CDS | C-australica_Contig_998 1523..1655 + |
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1682588865.4813485-UTR-C-australica_Contig_998:1655..1803 | 1682588865.4813485-UTR-C-australica_Contig_998:1655..1803 | Chrysoparadoxa australica CS_1217 | UTR | C-australica_Contig_998 1656..1803 + |
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-australica_Contig_998.1.1 >prot_C-australica_Contig_998.1.1 ID=prot_C-australica_Contig_998.1.1|Name=mRNA_C-australica_Contig_998.1.1|organism=Chrysoparadoxa australica CS_1217|type=polypeptide|length=187bp
GRAALSLAAEAGDGDSVRFLLKGGADTERRDQDGNTALILAAGVDDTAGL
SCVTALLDAGADLEARGESKATALHRAARWGRASIVRLLADRGALIDARN
KFGDTPLILAAYHGNEAAATALLEAGASLHATCNDGRSALFYGAVRGQLP
VVQTLLLFGADPDTPDVQGTKPYPFCEAQWRIGAHM* back to topmRNA from alignment at C-australica_Contig_998:149..1803+ Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_C-australica_Contig_998.1.1 ID=mRNA_C-australica_Contig_998.1.1|Name=mRNA_C-australica_Contig_998.1.1|organism=Chrysoparadoxa australica CS_1217|type=mRNA|length=1655bp|location=Sequence derived from alignment at C-australica_Contig_998:149..1803+ (Chrysoparadoxa australica CS_1217)
GGCCGCGCCGCGTTGAGTCTTGCCGCAGAAGCAGGAGATGGTGATTCCGT
GCGGTTCTTACTCAAGGGGGGAGCGGACACAGAGCGTCGTGATCAAGGTT
AGTCGGTATGATTAGCTATAGATGCTCTCTTGCCTTGAGAGAAGCTAAGG
CTGCTCACCCTGGAGCTGCTGTTAAATATGGGATTACGTGGTTGCGACAG
TAGTGCCATGTGGAAAACGTTGAGGTACAGCGGAAGCTGTGCCGCGTCTC
AAATTAAAAGTGCTCTTCCTTGCCCTGCCCTGGCCCCCAGATGGCAATAC
TGCGCTGATTCTGGCAGCTGGTGTTGATGACACTGCGGGCTTGTCGTGCG
TAACAGCCCTACTGGATGCTGGAGCAGACTTGGAGGTAGGCCTGTGGTGC
AAACAGCATAAAGTGCATCAGCCATATCCCATATCACAACTGATGTGTCT
CCCCTCTTGACTCCTGCTACGGCTTCTGCACTCCACTCCACTCCATCAGG
CTAGAGGGGAAAGCAAAGCCACCGCCTTGGTAATACTACCAACTCATCTT
GGCAATACTACCAACTCATCTTGGCTTTCCTAGTACAAACAGTCACCCTG
ACATACCAGCTATCAACCCCGAGAGAGAGCGCTATGCAGTAAAACTGGAA
AGTGAAAGTTGTTGAAGAGCTTAGTTGCTTTCCACTTCCTCTTCCTCTTG
CTTGGTAACGCCTGTGCTAATACATGTCATTGTCATTACCTGCAGCATCG
AGCCGCCCGCTGGGGCCGTGCGTCAATCGTAAGGCTGCTGGCCGATCGAG
GTGCACTCATTGATGCAAGGAATAAGGTACCACCACCCTACCCTCATTAT
CATAAGAACAGGCAACCAGACCCAGATGAGATGCAATATGCTTGCTTTGC
GTAGAGCAAGCTGGGGGACGGACCAGGATAACATACTAAATGAATAGCTC
CTCTCAGCCCCCCAGTTCGACCTATCAGCCCTGCTCTAACCACTCTGCAT
CGCACAGTTTGGGGACACTCCCCTAATCCTGGCTGCCTACCACGGCAACG
AAGCTGCAGCAACCGCGCTGCTAGAGGCCGGAGCTTCCCTGCATGCCACT
TGCAATGACGGTCGATCAGCGTTGTTCTACGGGTAAGCATCAAGTTGACT
AACTAAAATATGGTAGCTACGGAGTTAGTCAAGCATGTAGCTTCTGCTGG
TGATATGTGCTGTTTAGAGTGAGCTGTTCTTTTACAGCCTGCTTAGACAA
ATGCTCATGCTTATGCTCATGGATGGAAGGGTTGTGCCGCATGACAGTGA
TAGCTGATGGCCAAGCTCATCCCGTCTTTCAACACCACCAACCTCCTCAT
ATTCACTCATGCTACCCCTTCCAGTGCGGTGCGGGGCCAATTGCCGGTGG
TGCAGACGCTGCTGCTGTTTGGTGCTGACCCAGACACACCAGATGTACAG
GGGACTAAGCCTTACCCGTTCTGTGAGGCTCAGTGGAGGATAGGTGCACA
CATGTAAGCTGCAACTCAACTGCATGCAACTCCAGCGAGGCTGGACTACT
GCTACCAGCTGTCTTTGTTAGCTGTCTGCTGCCTTGACCACCCAACAAGC
AGAGCTTCTATCTAACCTGGCCGTTTCTTCTACACATGAAAAACGCGCAG
CACCC back to topCoding sequence (CDS) from alignment at C-australica_Contig_998:149..1803+ >mRNA_C-australica_Contig_998.1.1 ID=mRNA_C-australica_Contig_998.1.1|Name=mRNA_C-australica_Contig_998.1.1|organism=Chrysoparadoxa australica CS_1217|type=CDS|length=561bp|location=Sequence derived from alignment at C-australica_Contig_998:149..1803+ (Chrysoparadoxa australica CS_1217)
GGCCGCGCCGCGTTGAGTCTTGCCGCAGAAGCAGGAGATGGTGATTCCGT
GCGGTTCTTACTCAAGGGGGGAGCGGACACAGAGCGTCGTGATCAAGATG
GCAATACTGCGCTGATTCTGGCAGCTGGTGTTGATGACACTGCGGGCTTG
TCGTGCGTAACAGCCCTACTGGATGCTGGAGCAGACTTGGAGGCTAGAGG
GGAAAGCAAAGCCACCGCCTTGCATCGAGCCGCCCGCTGGGGCCGTGCGT
CAATCGTAAGGCTGCTGGCCGATCGAGGTGCACTCATTGATGCAAGGAAT
AAGTTTGGGGACACTCCCCTAATCCTGGCTGCCTACCACGGCAACGAAGC
TGCAGCAACCGCGCTGCTAGAGGCCGGAGCTTCCCTGCATGCCACTTGCA
ATGACGGTCGATCAGCGTTGTTCTACGGTGCGGTGCGGGGCCAATTGCCG
GTGGTGCAGACGCTGCTGCTGTTTGGTGCTGACCCAGACACACCAGATGT
ACAGGGGACTAAGCCTTACCCGTTCTGTGAGGCTCAGTGGAGGATAGGTG
CACACATGTAA back to top
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