Homology
BLAST of mRNA_C-australica_Contig_9969.1.1 vs. uniprot
Match:
A0A222E5I2_9RHOB (tRNA-dihydrouridine synthase n=4 Tax=Roseobacteraceae TaxID=2854170 RepID=A0A222E5I2_9RHOB)
HSP 1 Score: 546 bits (1406), Expect = 2.790e-195
Identity = 280/282 (99.29%), Postives = 280/282 (99.29%), Query Frame = 1
Query: 1 QITVPVLLAPLAGITDLPFPTLVSRFGAGLVVSEMIASGEFLTARPGTREKAELGAQIENTSVQIAGREAGPMAEAARRVADMGARVIDINMGCPAKKVTGGWSGSALMRAPDHALRLIEAVVAAVDLPVTLKTRLGWDVDCLNAPDLARRAEGAGVRMIVIHGRTRCQFYKGAANWAAINEVKSAVQVPVIANGDVVDASAAKDALRLSGADGVMIGRGAQGAPWRLAQVAHALYGAPKPDVPRGRALIDMVCGHYEAMLDFYGATLGNRVARKHLGWYMD 846
QITVPVLLAPLAGITDLPF TLVSRFGAGLVVSEMIASGEFLTARPGTREKAELGAQIENTSVQIAGREAGPMAEAARRVADMGARVIDINMGCPAKKVTGGWSGSALMRAPDHALRLIEAVV AVDLPVTLKTRLGWDVDCLNAPDLARRAEGAGVRMIVIHGRTRCQFYKGAANWAAINEVKSAVQVPVIANGDVVDASAAKDALRLSGADGVMIGRGAQGAPWRLAQVAHALYGAPKPDVPRGRALIDMVCGHYEAMLDFYGATLGNRVARKHLGWYMD
Sbjct: 9 QITVPVLLAPLAGITDLPFRTLVSRFGAGLVVSEMIASGEFLTARPGTREKAELGAQIENTSVQIAGREAGPMAEAARRVADMGARVIDINMGCPAKKVTGGWSGSALMRAPDHALRLIEAVVEAVDLPVTLKTRLGWDVDCLNAPDLARRAEGAGVRMIVIHGRTRCQFYKGAANWAAINEVKSAVQVPVIANGDVVDASAAKDALRLSGADGVMIGRGAQGAPWRLAQVAHALYGAPKPDVPRGRALIDMVCGHYEAMLDFYGATLGNRVARKHLGWYMD 290
BLAST of mRNA_C-australica_Contig_9969.1.1 vs. uniprot
Match:
A0A238K2A8_9RHOB (tRNA-dihydrouridine synthase n=1 Tax=Maliponia aquimaris TaxID=1673631 RepID=A0A238K2A8_9RHOB)
HSP 1 Score: 495 bits (1274), Expect = 3.590e-175
Identity = 254/282 (90.07%), Postives = 264/282 (93.62%), Query Frame = 1
Query: 1 QITVPVLLAPLAGITDLPFPTLVSRFGAGLVVSEMIASGEFLTARPGTREKAELGAQIENTSVQIAGREAGPMAEAARRVADMGARVIDINMGCPAKKVTGGWSGSALMRAPDHALRLIEAVVAAVDLPVTLKTRLGWDVDCLNAPDLARRAEGAGVRMIVIHGRTRCQFYKGAANWAAINEVKSAVQVPVIANGDVVDASAAKDALRLSGADGVMIGRGAQGAPWRLAQVAHALYGAPKPDVPRGRALIDMVCGHYEAMLDFYGATLGNRVARKHLGWYMD 846
+ITVPVLLAPLAGITDLPF +LVSRFGAGLVVSEMIASGEFLTARPGTREKAELGAQIENTSVQIAGRE GPMAEAAR VADMGARVIDINMGCPAKKVTGGWSGSALMRAPDHALRLIEAVVAAVDLPVTLKTRLGWD DCLNAPDLARRAEGAGVRM+VIHGRTRCQFYKGAA+WAAI +V+ AVQVPVIANGDVVDA++A+ AL SGA GVMIGRGAQGAPWRLA+VAHALYG P P VP GRAL DMV GHYEAML FYG TLGNRVARKHLGWYMD
Sbjct: 9 RITVPVLLAPLAGITDLPFRSLVSRFGAGLVVSEMIASGEFLTARPGTREKAELGAQIENTSVQIAGREPGPMAEAARMVADMGARVIDINMGCPAKKVTGGWSGSALMRAPDHALRLIEAVVAAVDLPVTLKTRLGWDDDCLNAPDLARRAEGAGVRMVVIHGRTRCQFYKGAADWAAIRKVRDAVQVPVIANGDVVDATSARRALAQSGAAGVMIGRGAQGAPWRLAEVAHALYGTPAPQVPTGRALADMVAGHYEAMLGFYGQTLGNRVARKHLGWYMD 290
BLAST of mRNA_C-australica_Contig_9969.1.1 vs. uniprot
Match:
A0A6F8Q8E3_9RHOB (tRNA-dihydrouridine synthase n=7 Tax=Roseobacteraceae TaxID=2854170 RepID=A0A6F8Q8E3_9RHOB)
HSP 1 Score: 486 bits (1252), Expect = 8.040e-172
Identity = 249/282 (88.30%), Postives = 261/282 (92.55%), Query Frame = 1
Query: 1 QITVPVLLAPLAGITDLPFPTLVSRFGAGLVVSEMIASGEFLTARPGTREKAELGAQIENTSVQIAGREAGPMAEAARRVADMGARVIDINMGCPAKKVTGGWSGSALMRAPDHALRLIEAVVAAVDLPVTLKTRLGWDVDCLNAPDLARRAEGAGVRMIVIHGRTRCQFYKGAANWAAINEVKSAVQVPVIANGDVVDASAAKDALRLSGADGVMIGRGAQGAPWRLAQVAHALYGAPKPDVPRGRALIDMVCGHYEAMLDFYGATLGNRVARKHLGWYMD 846
+ITVPVLLAPLAGITDLPF TLVSRFGAGLVVSEMIASGEFLT RPGTREKAELGAQIENTSVQIAGRE GPMAEAAR VADMGARVIDINMGCPAKKVTGGWSGSALMRAPDHALRL+EAVV AVDLPVTLKTRLGWD D LNAP +AR AE AGV+MIVIHGRTRCQFYKG A+WAAI+EVK AVQVPVIANGDV+DA+AA++AL SGADGVMIGRGAQGAPWRLA+VAHALYG P P+VP G ALIDMV GHYEAML FYG TLGNRVARKHLGWYMD
Sbjct: 9 RITVPVLLAPLAGITDLPFRTLVSRFGAGLVVSEMIASGEFLTERPGTREKAELGAQIENTSVQIAGREPGPMAEAARMVADMGARVIDINMGCPAKKVTGGWSGSALMRAPDHALRLVEAVVEAVDLPVTLKTRLGWDEDHLNAPQIARSAEAAGVKMIVIHGRTRCQFYKGKADWAAISEVKKAVQVPVIANGDVIDAAAAREALSRSGADGVMIGRGAQGAPWRLAEVAHALYGTPAPEVPEGAALIDMVSGHYEAMLGFYGKTLGNRVARKHLGWYMD 290
BLAST of mRNA_C-australica_Contig_9969.1.1 vs. uniprot
Match:
UPI001C463976 (tRNA dihydrouridine synthase DusB n=1 Tax=Roseobacteraceae TaxID=2854170 RepID=UPI001C463976)
HSP 1 Score: 484 bits (1246), Expect = 6.590e-171
Identity = 249/282 (88.30%), Postives = 261/282 (92.55%), Query Frame = 1
Query: 1 QITVPVLLAPLAGITDLPFPTLVSRFGAGLVVSEMIASGEFLTARPGTREKAELGAQIENTSVQIAGREAGPMAEAARRVADMGARVIDINMGCPAKKVTGGWSGSALMRAPDHALRLIEAVVAAVDLPVTLKTRLGWDVDCLNAPDLARRAEGAGVRMIVIHGRTRCQFYKGAANWAAINEVKSAVQVPVIANGDVVDASAAKDALRLSGADGVMIGRGAQGAPWRLAQVAHALYGAPKPDVPRGRALIDMVCGHYEAMLDFYGATLGNRVARKHLGWYMD 846
QIT PVLLAPLAGITDLPF TLVSRFGAGLVVSEMIASGEFLT RPGTREKAELGAQIENTSVQIAGREAGPMAEAAR VADMGARVIDINMGCPAKKVTGGWSGSALM+ PDHALRLIEAVVAAVDLPVTLKTRLGWD DCLNA ++ARRAE AGVRMIVIHGRTRCQFYKG+A+WAAI+EVK+AVQVPVIANGDVV + A+ AL SGADGVMIGRGAQGAPWRLAQVAHALYGAP P VP+G L+DMV GHY+AML FYG TLGNRVARKHLGWYMD
Sbjct: 9 QITEPVLLAPLAGITDLPFRTLVSRFGAGLVVSEMIASGEFLTERPGTREKAELGAQIENTSVQIAGREAGPMAEAARMVADMGARVIDINMGCPAKKVTGGWSGSALMQVPDHALRLIEAVVAAVDLPVTLKTRLGWDNDCLNAAEIARRAEAAGVRMIVIHGRTRCQFYKGSADWAAISEVKNAVQVPVIANGDVVSPATARQALARSGADGVMIGRGAQGAPWRLAQVAHALYGAPAPVVPQGTDLVDMVSGHYDAMLAFYGKTLGNRVARKHLGWYMD 290
BLAST of mRNA_C-australica_Contig_9969.1.1 vs. uniprot
Match:
A0A0N7LZ82_9RHOB (tRNA-dihydrouridine synthase n=1 Tax=Tropicibacter naphthalenivorans TaxID=441103 RepID=A0A0N7LZ82_9RHOB)
HSP 1 Score: 466 bits (1199), Expect = 9.790e-164
Identity = 235/282 (83.33%), Postives = 253/282 (89.72%), Query Frame = 1
Query: 1 QITVPVLLAPLAGITDLPFPTLVSRFGAGLVVSEMIASGEFLTARPGTREKAELGAQIENTSVQIAGREAGPMAEAARRVADMGARVIDINMGCPAKKVTGGWSGSALMRAPDHALRLIEAVVAAVDLPVTLKTRLGWDVDCLNAPDLARRAEGAGVRMIVIHGRTRCQFYKGAANWAAINEVKSAVQVPVIANGDVVDASAAKDALRLSGADGVMIGRGAQGAPWRLAQVAHALYGAPKPDVPRGRALIDMVCGHYEAMLDFYGATLGNRVARKHLGWYMD 846
+IT PVLLAPLAGITDLPF LVSRFGAGLVVSEMIASGEFLTARPGTREKAELGAQIENTSVQIAGRE PMAEAAR+V DMGA+V+DINMGCPAKKVTGGWSGSALM+ PDHALRLIEAVV AVD+PVTLKTRLGWD NA DLA+RAEGAGVRM+VIHGRTRCQFYKG A+WAAI EVK AV VPV+ANGD++DA+ A+ AL LSGADGVM+GRGAQGAPW LA++A LYG P PD+P G AL DMVC HYEAMLDFYGATLGNRVARKHLGWYMD
Sbjct: 9 EITPPVLLAPLAGITDLPFRNLVSRFGAGLVVSEMIASGEFLTARPGTREKAELGAQIENTSVQIAGREPEPMAEAARQVVDMGAKVVDINMGCPAKKVTGGWSGSALMQVPDHALRLIEAVVNAVDVPVTLKTRLGWDDSARNAADLAKRAEGAGVRMVVIHGRTRCQFYKGHADWAAIAEVKQAVNVPVVANGDIIDAATARQALDLSGADGVMVGRGAQGAPWVLAEIAAELYGTPAPDIPTGSALADMVCAHYEAMLDFYGATLGNRVARKHLGWYMD 290
BLAST of mRNA_C-australica_Contig_9969.1.1 vs. uniprot
Match:
UPI000EF4BD7A (tRNA dihydrouridine synthase DusB n=1 Tax=Tropicibacter sp. LMIT003 TaxID=2267683 RepID=UPI000EF4BD7A)
HSP 1 Score: 464 bits (1195), Expect = 3.700e-163
Identity = 236/282 (83.69%), Postives = 254/282 (90.07%), Query Frame = 1
Query: 1 QITVPVLLAPLAGITDLPFPTLVSRFGAGLVVSEMIASGEFLTARPGTREKAELGAQIENTSVQIAGREAGPMAEAARRVADMGARVIDINMGCPAKKVTGGWSGSALMRAPDHALRLIEAVVAAVDLPVTLKTRLGWDVDCLNAPDLARRAEGAGVRMIVIHGRTRCQFYKGAANWAAINEVKSAVQVPVIANGDVVDASAAKDALRLSGADGVMIGRGAQGAPWRLAQVAHALYGAPKPDVPRGRALIDMVCGHYEAMLDFYGATLGNRVARKHLGWYMD 846
+I PVLLAPLAGITDLPF +LVSRFGAGLVVSEMIASGEFLTARPGTREKAELGAQIENTSVQIAGREA PMAEAAR+V DMGARV+DINMGCPAKKVTGGWSGSALM+ PDHALRLIEAVV AVD+PVTLKTRLGW+ LNAPDLARRAEGAGVRMIVIHGRTRCQFYKG A+WAAI VK+AV +PV+ANGD+VDA A+ AL S ADGVMIGRGAQGAPW LAQ+A L+G P+PD+P+GRAL DMVC HYEAML FYG TLGNRVARKHLGWYMD
Sbjct: 9 EIVPPVLLAPLAGITDLPFRSLVSRFGAGLVVSEMIASGEFLTARPGTREKAELGAQIENTSVQIAGREAAPMAEAARQVVDMGARVVDINMGCPAKKVTGGWSGSALMQVPDHALRLIEAVVEAVDVPVTLKTRLGWNDATLNAPDLARRAEGAGVRMIVIHGRTRCQFYKGRADWAAIRAVKNAVTIPVVANGDIVDAPTARTALEQSDADGVMIGRGAQGAPWVLAQIAADLFGTPQPDIPQGRALTDMVCEHYEAMLSFYGETLGNRVARKHLGWYMD 290
BLAST of mRNA_C-australica_Contig_9969.1.1 vs. uniprot
Match:
A0A8J7WD69_9RHOB (tRNA-dihydrouridine synthase n=2 Tax=Aestuariicoccus sp. KMU-90 TaxID=2827239 RepID=A0A8J7WD69_9RHOB)
HSP 1 Score: 464 bits (1195), Expect = 2.190e-162
Identity = 235/281 (83.63%), Postives = 252/281 (89.68%), Query Frame = 1
Query: 4 ITVPVLLAPLAGITDLPFPTLVSRFGAGLVVSEMIASGEFLTARPGTREKAELGAQIENTSVQIAGREAGPMAEAARRVADMGARVIDINMGCPAKKVTGGWSGSALMRAPDHALRLIEAVVAAVDLPVTLKTRLGWDVDCLNAPDLARRAEGAGVRMIVIHGRTRCQFYKGAANWAAINEVKSAVQVPVIANGDVVDASAAKDALRLSGADGVMIGRGAQGAPWRLAQVAHALYGAPKPDVPRGRALIDMVCGHYEAMLDFYGATLGNRVARKHLGWYMD 846
I+ PVLLAPLAGITDLPF TLVS FGAGLVVSEMIASGEFLTARPGTREKAELGAQ+ENTSVQIAGRE GPMAEAAR VADMGARVIDINMGCPAKKVTGG+SGSALMR PDHALRL+EAVV AVD+PVTLKTRLGWD DCLNAPDLARRAE AGVRM+VIHGRTRCQFYKG A+WAAI V+ AV +PVIANGD+ DA+ A+ AL SGA GVM+GRGAQGAPWRLA++AHALYG P +PRG AL+DMV GHYEAML FYGA LG RVARKHLGWYMD
Sbjct: 56 ISPPVLLAPLAGITDLPFRTLVSSFGAGLVVSEMIASGEFLTARPGTREKAELGAQVENTSVQIAGREPGPMAEAARMVADMGARVIDINMGCPAKKVTGGYSGSALMRDPDHALRLVEAVVGAVDVPVTLKTRLGWDTDCLNAPDLARRAEAAGVRMVVIHGRTRCQFYKGRADWAAIRAVRDAVSIPVIANGDITDAATARQALTQSGAAGVMVGRGAQGAPWRLAEIAHALYGTDAPVIPRGAALVDMVAGHYEAMLAFYGADLGLRVARKHLGWYMD 336
BLAST of mRNA_C-australica_Contig_9969.1.1 vs. uniprot
Match:
UPI001C38DDE4 (tRNA dihydrouridine synthase DusB n=1 Tax=Thalassococcus sp. CAU 1522 TaxID=2851652 RepID=UPI001C38DDE4)
HSP 1 Score: 460 bits (1183), Expect = 3.550e-161
Identity = 231/281 (82.21%), Postives = 249/281 (88.61%), Query Frame = 1
Query: 4 ITVPVLLAPLAGITDLPFPTLVSRFGAGLVVSEMIASGEFLTARPGTREKAELGAQIENTSVQIAGREAGPMAEAARRVADMGARVIDINMGCPAKKVTGGWSGSALMRAPDHALRLIEAVVAAVDLPVTLKTRLGWDVDCLNAPDLARRAEGAGVRMIVIHGRTRCQFYKGAANWAAINEVKSAVQVPVIANGDVVDASAAKDALRLSGADGVMIGRGAQGAPWRLAQVAHALYGAPKPDVPRGRALIDMVCGHYEAMLDFYGATLGNRVARKHLGWYMD 846
+T PVLLAPLAGITDLPF TLVSRFGAGLVVSEMIASGEFLTARPGTREKAELGA I NTSVQ+AGRE GPMAEAAR VADMGARVIDINMGCPAKKVTGGWSGSALM+ PDHALRLIEAVV AVDLPVTLKTRLGWD CLNAPDLARRAE AGVRM+VIHGRTRCQFYKG A+WAAI VK AV +PVIANGD+VDA A+DA+ SGADGVM+GR AQGAPWRLA++AH+L+G P P +P+G AL++MV HYEAML FYG LG R ARKHLGWYMD
Sbjct: 17 VTPPVLLAPLAGITDLPFRTLVSRFGAGLVVSEMIASGEFLTARPGTREKAELGAGIANTSVQLAGREPGPMAEAARMVADMGARVIDINMGCPAKKVTGGWSGSALMQVPDHALRLIEAVVGAVDLPVTLKTRLGWDDGCLNAPDLARRAEAAGVRMVVIHGRTRCQFYKGRADWAAIRAVKEAVSIPVIANGDIVDAGTARDAMDASGADGVMVGRAAQGAPWRLAEIAHSLFGVPAPRIPQGMALVEMVIAHYEAMLSFYGVDLGLRCARKHLGWYMD 297
BLAST of mRNA_C-australica_Contig_9969.1.1 vs. uniprot
Match:
A3K6F4_9RHOB (tRNA-dihydrouridine synthase n=3 Tax=Sagittula TaxID=58842 RepID=A3K6F4_9RHOB)
HSP 1 Score: 457 bits (1177), Expect = 1.370e-160
Identity = 232/276 (84.06%), Postives = 247/276 (89.49%), Query Frame = 1
Query: 19 LLAPLAGITDLPFPTLVSRFGAGLVVSEMIASGEFLTARPGTREKAELGAQIENTSVQIAGREAGPMAEAARRVADMGARVIDINMGCPAKKVTGGWSGSALMRAPDHALRLIEAVVAAVDLPVTLKTRLGWDVDCLNAPDLARRAEGAGVRMIVIHGRTRCQFYKGAANWAAINEVKSAVQVPVIANGDVVDASAAKDALRLSGADGVMIGRGAQGAPWRLAQVAHALYGAPKPDVPRGRALIDMVCGHYEAMLDFYGATLGNRVARKHLGWYMD 846
LLAPLAGITDLPF TLVSR+GAGLVVSEMIASGEFLTARPGTREKAELGAQ+ENTSVQIAGRE PMAEAAR VADMGARVIDINMGCPAKKVTGGWSGSALMR PDHALRLIEAVVAAVDLPVTLKTRLGWD LNAP+LARRAEGAGVRMIVIHGRTRCQFYKG A+WAAI VK AV +PV+ANGD+ DA A+ AL LSGADGVM+GRGAQGAPW LA++A L+GAP P++P G L D+V HYEAMLDFYG TLGNRVARKHLGWYMD
Sbjct: 2 LLAPLAGITDLPFRTLVSRYGAGLVVSEMIASGEFLTARPGTREKAELGAQVENTSVQIAGREPEPMAEAARMVADMGARVIDINMGCPAKKVTGGWSGSALMRVPDHALRLIEAVVAAVDLPVTLKTRLGWDDTDLNAPELARRAEGAGVRMIVIHGRTRCQFYKGRADWAAIRPVKDAVSIPVVANGDITDADTARRALDLSGADGVMVGRGAQGAPWMLAEIASKLHGAPAPEIPEGTELADLVAEHYEAMLDFYGPTLGNRVARKHLGWYMD 277
BLAST of mRNA_C-australica_Contig_9969.1.1 vs. uniprot
Match:
A0A7W6DX11_9RHOB (tRNA-dihydrouridine synthase n=2 Tax=Sagittula marina TaxID=943940 RepID=A0A7W6DX11_9RHOB)
HSP 1 Score: 453 bits (1166), Expect = 6.260e-159
Identity = 230/276 (83.33%), Postives = 249/276 (90.22%), Query Frame = 1
Query: 19 LLAPLAGITDLPFPTLVSRFGAGLVVSEMIASGEFLTARPGTREKAELGAQIENTSVQIAGREAGPMAEAARRVADMGARVIDINMGCPAKKVTGGWSGSALMRAPDHALRLIEAVVAAVDLPVTLKTRLGWDVDCLNAPDLARRAEGAGVRMIVIHGRTRCQFYKGAANWAAINEVKSAVQVPVIANGDVVDASAAKDALRLSGADGVMIGRGAQGAPWRLAQVAHALYGAPKPDVPRGRALIDMVCGHYEAMLDFYGATLGNRVARKHLGWYMD 846
+LAPLAGITDLPF TLVSRFGAGLVVSEMIASGEFLTARPGTREKAELGAQIENTSVQIAGRE MAEAAR VADMGAR+IDINMGCPAKKVTGGWSGSALM+ PDHALRLIEAVV AVDLPVTLKTRLGW+ + NAPDLARRAEGAGVRM+VIHGRTRCQFYKG+A+WAAI +V+ AV +PV+ANGD++DA A+ AL+ SGADGVMIGRGAQGAPW LAQVA LYGAP PD+P+G LI MV HYE+MLDFYG TLGNRVARKHLGWYMD
Sbjct: 1 MLAPLAGITDLPFRTLVSRFGAGLVVSEMIASGEFLTARPGTREKAELGAQIENTSVQIAGREPDAMAEAARMVADMGARLIDINMGCPAKKVTGGWSGSALMQVPDHALRLIEAVVNAVDLPVTLKTRLGWNDEARNAPDLARRAEGAGVRMVVIHGRTRCQFYKGSADWAAIRDVRDAVDIPVVANGDIIDADTARLALKQSGADGVMIGRGAQGAPWVLAQVAADLYGAPPPDIPKGDDLISMVSEHYESMLDFYGPTLGNRVARKHLGWYMD 276
The following BLAST results are available for this feature:
BLAST of mRNA_C-australica_Contig_9969.1.1 vs. uniprot
Analysis Date: 2022-09-19 (
Diamond blastx: OGS1.0 vs UniRef90 )
Total hits: 25
0 1 Expect = 2.79e-195 / Id = 99.29 Expect = 3.59e-175 / Id = 90.07 Expect = 8.04e-172 / Id = 88.30 Expect = 6.59e-171 / Id = 88.30 Expect = 9.79e-164 / Id = 83.33 Expect = 3.70e-163 / Id = 83.69 Expect = 2.19e-162 / Id = 83.63 Expect = 3.55e-161 / Id = 82.21 Expect = 1.37e-160 / Id = 84.06 Expect = 6.26e-159 / Id = 83.33 Sequence A0A222E5I2_9RHOB A0A238K2A8_9RHOB A0A6F8Q8E3_9RHOB UPI001C463976 A0A0N7LZ82_9RHOB UPI000EF4BD7A A0A8J7WD69_9RHOB UPI001C38DDE4 A3K6F4_9RHOB A0A7W6DX11_9RHOB Pages
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Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-australica_Contig_9969.1.1
>prot_C-australica_Contig_9969.1.1 ID=prot_C-australica_Contig_9969.1.1|Name=mRNA_C-australica_Contig_9969.1.1|organism=Chrysoparadoxa australica CS_1217|type=polypeptide|length=282bp
QITVPVLLAPLAGITDLPFPTLVSRFGAGLVVSEMIASGEFLTARPGTRE back to top mRNA from alignment at C-australica_Contig_9969:1..846+
Legend: CDS polypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_C-australica_Contig_9969.1.1 ID=mRNA_C-australica_Contig_9969.1.1|Name=mRNA_C-australica_Contig_9969.1.1|organism=Chrysoparadoxa australica CS_1217|type=mRNA|length=846bp|location=Sequence derived from alignment at C-australica_Contig_9969:1..846+ (Chrysoparadoxa australica CS_1217)CAGATCACCGTTCCTGTTTTGCTGGCACCGCTGGCGGGAATCACCGATCT
GCCGTTTCCCACACTTGTTTCGCGCTTTGGCGCCGGTCTTGTCGTTTCCG
AGATGATCGCCAGCGGCGAATTTCTGACCGCGCGCCCCGGCACACGGGAA
AAGGCCGAACTGGGCGCGCAGATAGAGAATACGTCGGTGCAGATCGCCGG
TCGAGAGGCGGGACCGATGGCAGAGGCGGCGCGCCGGGTGGCCGATATGG
GTGCGCGGGTGATCGACATCAACATGGGGTGCCCGGCGAAGAAGGTCACC
GGCGGATGGTCCGGGTCGGCGCTGATGCGGGCGCCGGATCACGCGCTGCG
CCTGATAGAGGCGGTTGTTGCGGCGGTGGATTTACCAGTGACGCTAAAGA
CGCGGCTTGGCTGGGATGTGGACTGTTTGAACGCGCCGGATCTGGCGCGC
CGGGCCGAAGGTGCAGGCGTCAGGATGATCGTCATTCATGGCCGCACGCG
CTGTCAGTTTTACAAGGGTGCGGCCAACTGGGCCGCCATAAATGAGGTGA
AGAGCGCTGTGCAAGTGCCTGTAATTGCAAACGGAGATGTCGTTGACGCC
TCCGCTGCCAAAGATGCGCTGCGCCTGTCCGGGGCGGATGGCGTCATGAT
CGGACGCGGGGCGCAAGGGGCCCCTTGGCGGTTGGCGCAAGTTGCCCATG
CCCTGTACGGCGCACCAAAACCGGACGTGCCCCGGGGCCGTGCGTTGATC
GATATGGTCTGCGGACACTATGAGGCCATGCTGGACTTCTACGGGGCCAC
TCTGGGCAACCGTGTCGCGCGCAAACATCTGGGATGGTACATGGAT back to top Coding sequence (CDS) from alignment at C-australica_Contig_9969:1..846+
>mRNA_C-australica_Contig_9969.1.1 ID=mRNA_C-australica_Contig_9969.1.1|Name=mRNA_C-australica_Contig_9969.1.1|organism=Chrysoparadoxa australica CS_1217|type=CDS|length=846bp|location=Sequence derived from alignment at C-australica_Contig_9969:1..846+ (Chrysoparadoxa australica CS_1217) back to top