mRNA_C-australica_Contig_9920.1.1 (mRNA) Chrysoparadoxa australica CS_1217

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_C-australica_Contig_9920.1.1
Unique NamemRNA_C-australica_Contig_9920.1.1
TypemRNA
OrganismChrysoparadoxa australica CS_1217 (Chrysoparadoxa australica CS_1217)
Homology
BLAST of mRNA_C-australica_Contig_9920.1.1 vs. uniprot
Match: UPI0003B4770B (GMC family oxidoreductase N-terminal domain-containing protein n=1 Tax=Oceanicaulis alexandrii TaxID=153233 RepID=UPI0003B4770B)

HSP 1 Score: 582 bits (1499), Expect = 3.630e-206
Identity = 279/283 (98.59%), Postives = 281/283 (99.29%), Query Frame = 1
Query:    1 AITNPAINWDYWTEPQKHLGDRKLYWPRGKALGGSSSINAMHYMRGALENYDDWESTYGAEGWNGDAALEAFKSVENNENHGAPFHGQGGPLNVKTIGPLNPLTERYFEACRQRQIPDNPDHNGARQEGFGPYQVTQKGGKRWSAADAFLKPAMNRPNLTVVTGALAHRIVIEKGEAQGVLIETDGEMRTVTAKREVILSGGAINSPHLLMLSGIGPADHLREHGISVEHDAPGVGENLQDHLDILARARTKSATSIGYSARKFPATARDVLQWALTGTGNFT 849
            AITNPAINWDYWTEPQK+LGDRKLYWPRGKALGGSSSINAMHYMRGALENYDDWESTYGAEGWNGDAALEAFKSVENNENHGAPFHGQGGPLNVKTIGPLNPLTERYFEACRQRQIPDNPDHNGARQEGFGPYQVTQKGGKRWSAADAFLKPAMNRPNLTVVTGALAHRIVIEKGEAQGVLIETDGEMRTVTAK EVILSGGAINSPHLLMLSGIGPADHLREHGISVEHDAPGVGENLQDHLDILARARTKSATSIGYSARKFPATARDV+QWALTGTG FT
Sbjct:   58 AITNPAINWDYWTEPQKNLGDRKLYWPRGKALGGSSSINAMHYMRGALENYDDWESTYGAEGWNGDAALEAFKSVENNENHGAPFHGQGGPLNVKTIGPLNPLTERYFEACRQRQIPDNPDHNGARQEGFGPYQVTQKGGKRWSAADAFLKPAMNRPNLTVVTGALAHRIVIEKGEAQGVLIETDGEMRTVTAKHEVILSGGAINSPHLLMLSGIGPADHLREHGISVEHDAPGVGENLQDHLDILARARTKSATSIGYSARKFPATARDVMQWALTGTGKFT 340          
BLAST of mRNA_C-australica_Contig_9920.1.1 vs. uniprot
Match: A3UF68_9PROT (Glucose-methanol-choline oxidoreductase n=2 Tax=unclassified Oceanicaulis TaxID=2632123 RepID=A3UF68_9PROT)

HSP 1 Score: 524 bits (1349), Expect = 2.260e-183
Identity = 248/283 (87.63%), Postives = 264/283 (93.29%), Query Frame = 1
Query:    1 AITNPAINWDYWTEPQKHLGDRKLYWPRGKALGGSSSINAMHYMRGALENYDDWESTYGAEGWNGDAALEAFKSVENNENHGAPFHGQGGPLNVKTIGPLNPLTERYFEACRQRQIPDNPDHNGARQEGFGPYQVTQKGGKRWSAADAFLKPAMNRPNLTVVTGALAHRIVIEKGEAQGVLIETDGEMRTVTAKREVILSGGAINSPHLLMLSGIGPADHLREHGISVEHDAPGVGENLQDHLDILARARTKSATSIGYSARKFPATARDVLQWALTGTGNFT 849
            AITNPAINWDYWTEPQ++L DR LYWPRGK LGGSSSINAMHYMRGALENYD+WES YGA GW+GDAALEAF++VENNENH  PFHGQGGPLNVKTIGPLNPLT RYFEACR+RQIP+N DHNGARQEGFG YQVTQK GKRWSAADAFLKPAM RPNL+VVT A+AHR+V+E GEA+GVLIE DGEM+TVTA+REVILSGGAINSP LLMLSGIGPADHLRE G+SVEHD PGVGENLQDHLDILARARTKSA SIGYSARKFPATARDVLQWALTGTGNFT
Sbjct:   58 AITNPAINWDYWTEPQRNLNDRALYWPRGKTLGGSSSINAMHYMRGALENYDEWESAYGATGWDGDAALEAFRAVENNENHAGPFHGQGGPLNVKTIGPLNPLTHRYFEACRRRQIPENDDHNGARQEGFGTYQVTQKAGKRWSAADAFLKPAMQRPNLSVVTDAMAHRVVLENGEARGVLIEIDGEMKTVTARREVILSGGAINSPQLLMLSGIGPADHLREVGVSVEHDLPGVGENLQDHLDILARARTKSAASIGYSARKFPATARDVLQWALTGTGNFT 340          
BLAST of mRNA_C-australica_Contig_9920.1.1 vs. uniprot
Match: UPI001EDCC902 (GMC family oxidoreductase N-terminal domain-containing protein n=1 Tax=Shewanella sp. ER-Te-42B-Light TaxID=2872342 RepID=UPI001EDCC902)

HSP 1 Score: 475 bits (1223), Expect = 1.610e-164
Identity = 224/283 (79.15%), Postives = 249/283 (87.99%), Query Frame = 1
Query:    1 AITNPAINWDYWTEPQKHLGDRKLYWPRGKALGGSSSINAMHYMRGALENYDDWESTYGAEGWNGDAALEAFKSVENNENHGAPFHGQGGPLNVKTIGPLNPLTERYFEACRQRQIPDNPDHNGARQEGFGPYQVTQKGGKRWSAADAFLKPAMNRPNLTVVTGALAHRIVIEKGEAQGVLIETDGEMRTVTAKREVILSGGAINSPHLLMLSGIGPADHLREHGISVEHDAPGVGENLQDHLDILARARTKSATSIGYSARKFPATARDVLQWALTGTGNFT 849
            AIT  +INW+YWT+PQ+ L  RKLYWPRGKALGGSSSINAMHYMRGALENYD+WE  YGA+GW  +A LEAFK VE+NENHG P+HGQGGPLNVKTI PLNPLT+RYFEACRQRQ+P+NPDHNGA QEGFGPYQVTQKG KR SAADAFLKP + RPNLTV+TGALA RI+IE G A G+ IE DG+++T++A+REVI SGGA+NSP LLMLSGIGPADHLRE GISVE D PGVG NLQDHLDI+ARA TK+ TSIGYS RKFPATARDVLQWALTGTG FT
Sbjct:   37 AITEESINWNYWTQPQRQLNGRKLYWPRGKALGGSSSINAMHYMRGALENYDEWERVYGADGWGREAVLEAFKRVEHNENHGEPWHGQGGPLNVKTIAPLNPLTQRYFEACRQRQLPENPDHNGAAQEGFGPYQVTQKGAKRCSAADAFLKPVLGRPNLTVITGALARRILIENGRAAGLQIEADGDIQTLSARREVIASGGAVNSPQLLMLSGIGPADHLREQGISVEADLPGVGANLQDHLDIMARASTKTPTSIGYSWRKFPATARDVLQWALTGTGKFT 319          
BLAST of mRNA_C-australica_Contig_9920.1.1 vs. uniprot
Match: A0A5M6ZHD0_9PROT (Glucose-methanol-choline oxidoreductase n=1 Tax=Alkalicaulis satelles TaxID=2609175 RepID=A0A5M6ZHD0_9PROT)

HSP 1 Score: 476 bits (1224), Expect = 2.000e-164
Identity = 226/283 (79.86%), Postives = 247/283 (87.28%), Query Frame = 1
Query:    1 AITNPAINWDYWTEPQKHLGDRKLYWPRGKALGGSSSINAMHYMRGALENYDDWESTYGAEGWNGDAALEAFKSVENNENHGAPFHGQGGPLNVKTIGPLNPLTERYFEACRQRQIPDNPDHNGARQEGFGPYQVTQKGGKRWSAADAFLKPAMNRPNLTVVTGALAHRIVIEKGEAQGVLIETDGEMRTVTAKREVILSGGAINSPHLLMLSGIGPADHLREHGISVEHDAPGVGENLQDHLDILARARTKSATSIGYSARKFPATARDVLQWALTGTGNFT 849
            AIT+ AINW+YWTEPQ+HL  RKLYWPRGK LGGSSSINAMHYMRGA ENYD+WE  YGA+GW  +AALEAF  VENNENHGAP+HG+GGPLNVKTI PLNPLTERY+EACR RQIP+NPDHNG RQEGFGPYQVTQKGGKR SAADAFL+PA+ RPNLTV+TGALA RIVIE+G A G+ IE +GE+R + A REVI SGGAINSP LLMLSGIGP DHLREHGISVE D PGVG NLQDHLDI+ARA T+  TSIGYS +K PATARDVLQWALTGTG FT
Sbjct:   54 AITDEAINWNYWTEPQRHLHGRKLYWPRGKTLGGSSSINAMHYMRGAWENYDEWEQVYGAQGWGREAALEAFTRVENNENHGAPWHGKGGPLNVKTIAPLNPLTERYYEACRARQIPENPDHNGERQEGFGPYQVTQKGGKRCSAADAFLRPALKRPNLTVITGALARRIVIEEGRATGLEIEVEGEVRVIEAAREVIASGGAINSPQLLMLSGIGPGDHLREHGISVEADLPGVGANLQDHLDIMARASTRKPTSIGYSLQKLPATARDVLQWALTGTGPFT 336          
BLAST of mRNA_C-australica_Contig_9920.1.1 vs. uniprot
Match: A0A4S2H4M3_9PROT (Glucose-methanol-choline oxidoreductase n=1 Tax=Marinicauda algicola TaxID=2029849 RepID=A0A4S2H4M3_9PROT)

HSP 1 Score: 456 bits (1173), Expect = 1.160e-156
Identity = 216/283 (76.33%), Postives = 243/283 (85.87%), Query Frame = 1
Query:    1 AITNPAINWDYWTEPQKHLGDRKLYWPRGKALGGSSSINAMHYMRGALENYDDWESTYGAEGWNGDAALEAFKSVENNENHGAPFHGQGGPLNVKTIGPLNPLTERYFEACRQRQIPDNPDHNGARQEGFGPYQVTQKGGKRWSAADAFLKPAMNRPNLTVVTGALAHRIVIEKGEAQGVLIETDGEMRTVTAKREVILSGGAINSPHLLMLSGIGPADHLREHGISVEHDAPGVGENLQDHLDILARARTKSATSIGYSARKFPATARDVLQWALTGTGNFT 849
            AIT+P INWDYWTEPQK L DR+LYWPRGK LGGSSSINAMHYMRGA ENYD+WES YGA GWN D+AL AFK VE+NE+HG P+HG+GGPLNVKTI P+NP+TE Y EACR+ QIP+NPDHNG RQEGFG YQVTQK GKR SAADAFLKPA+ R NL V+TG LA R+V+E+G A GV I+  GE +TV AKREVIL+GGA+NSP LLMLSGIGPADHLREHGI+VE D PGVG NLQDHLD++ARARTKSA S+GYS RK PA ARDVLQWA TG+G+FT
Sbjct:   55 AITDPKINWDYWTEPQKELRDRRLYWPRGKTLGGSSSINAMHYMRGAWENYDEWESGYGATGWNRDSALRAFKRVEHNEDHGEPWHGRGGPLNVKTIRPVNPMTELYHEACRRAQIPENPDHNGERQEGFGTYQVTQKDGKRCSAADAFLKPALKRENLNVMTGVLARRVVVEEGRATGVEIDHKGERKTVIAKREVILAGGALNSPQLLMLSGIGPADHLREHGIAVEKDLPGVGANLQDHLDVMARARTKSAKSLGYSWRKLPANARDVLQWAFTGSGDFT 337          
BLAST of mRNA_C-australica_Contig_9920.1.1 vs. uniprot
Match: A0A2U2BQU7_9PROT (Glucose-methanol-choline oxidoreductase n=1 Tax=Marinicauda salina TaxID=2135793 RepID=A0A2U2BQU7_9PROT)

HSP 1 Score: 454 bits (1169), Expect = 4.670e-156
Identity = 213/283 (75.27%), Postives = 241/283 (85.16%), Query Frame = 1
Query:    1 AITNPAINWDYWTEPQKHLGDRKLYWPRGKALGGSSSINAMHYMRGALENYDDWESTYGAEGWNGDAALEAFKSVENNENHGAPFHGQGGPLNVKTIGPLNPLTERYFEACRQRQIPDNPDHNGARQEGFGPYQVTQKGGKRWSAADAFLKPAMNRPNLTVVTGALAHRIVIEKGEAQGVLIETDGEMRTVTAKREVILSGGAINSPHLLMLSGIGPADHLREHGISVEHDAPGVGENLQDHLDILARARTKSATSIGYSARKFPATARDVLQWALTGTGNFT 849
            A+T+ +INWDYWTEPQKHL DRKLYWPRGKALGGSSSINAMHYMRGA ENYD WE  +GA GWN   ALEAFK VENNE+HG P+HGQGGPLNVKTI P+NP+TE Y+EACR+RQIP+NPDHNG RQEGFG YQVTQK GKR SAADAFL+PA++RPNLTV+T  LA R+VIE G A GV I+ DGE +T+ A REVIL+GGA+NSP LLMLSGIGPADHLRE G+ VE D PGVG NLQDHLD++ARARTKSA S+GYS +KFP  A D+ QWA+TGTG FT
Sbjct:   55 AMTDESINWDYWTEPQKHLNDRKLYWPRGKALGGSSSINAMHYMRGAWENYDSWERDHGAAGWNRQTALEAFKRVENNEDHGEPWHGQGGPLNVKTISPVNPMTELYYEACRRRQIPENPDHNGERQEGFGTYQVTQKDGKRCSAADAFLRPALDRPNLTVMTQVLARRVVIENGRAAGVEIDHDGERKTIAANREVILAGGALNSPQLLMLSGIGPADHLREVGVGVEVDLPGVGANLQDHLDVMARARTKSAKSLGYSWKKFPRNALDITQWAITGTGRFT 337          
BLAST of mRNA_C-australica_Contig_9920.1.1 vs. uniprot
Match: A0A0N8K3U3_9PROT (Choline dehydrogenase BetA n=4 Tax=Maricaulaceae TaxID=2800061 RepID=A0A0N8K3U3_9PROT)

HSP 1 Score: 454 bits (1167), Expect = 9.080e-156
Identity = 212/283 (74.91%), Postives = 248/283 (87.63%), Query Frame = 1
Query:    1 AITNPAINWDYWTEPQKHLGDRKLYWPRGKALGGSSSINAMHYMRGALENYDDWESTYGAEGWNGDAALEAFKSVENNENHGAPFHGQGGPLNVKTIGPLNPLTERYFEACRQRQIPDNPDHNGARQEGFGPYQVTQKGGKRWSAADAFLKPAMNRPNLTVVTGALAHRIVIEKGEAQGVLIETDGEMRTVTAKREVILSGGAINSPHLLMLSGIGPADHLREHGISVEHDAPGVGENLQDHLDILARARTKSATSIGYSARKFPATARDVLQWALTGTGNFT 849
            AIT P+INWDYWT+PQK+L +R+LYWPRGK LGGSSSINAMHYMRGA ENYD+WE+ YGA GW  DAALEAFK +ENNEN GAP+HG+GGPLNVK+I P+NPLTE Y+EACR+RQ+P N D NG RQEGFG YQVTQK GKR SAADAFLKPAM R NLTV+TGALA ++++E+G A G+ +ET+ +  ++ A++EVIL+GGAINSPHLLMLSGIGPADHLR+HGISVE D PGVG N+QDHLDI+ARA T+SA SIGYS +KFPATARDVLQWA+TGTGNFT
Sbjct:   56 AITEPSINWDYWTQPQKNLENRQLYWPRGKTLGGSSSINAMHYMRGAWENYDEWETVYGATGWGRDAALEAFKRIENNENLGAPWHGKGGPLNVKSIDPVNPLTELYYEACRRRQMPWNDDFNGERQEGFGVYQVTQKDGKRCSAADAFLKPAMTRENLTVITGALARKVIVEEGRAAGLEVETESQTCSIIARKEVILAGGAINSPHLLMLSGIGPADHLRDHGISVEADLPGVGANMQDHLDIMARASTRSAKSIGYSLKKFPATARDVLQWAVTGTGNFT 338          
BLAST of mRNA_C-australica_Contig_9920.1.1 vs. uniprot
Match: A0A4S2HBM8_9PROT (Glucose-methanol-choline oxidoreductase n=1 Tax=Marinicauda pacifica TaxID=1133559 RepID=A0A4S2HBM8_9PROT)

HSP 1 Score: 453 bits (1165), Expect = 1.890e-155
Identity = 211/283 (74.56%), Postives = 240/283 (84.81%), Query Frame = 1
Query:    1 AITNPAINWDYWTEPQKHLGDRKLYWPRGKALGGSSSINAMHYMRGALENYDDWESTYGAEGWNGDAALEAFKSVENNENHGAPFHGQGGPLNVKTIGPLNPLTERYFEACRQRQIPDNPDHNGARQEGFGPYQVTQKGGKRWSAADAFLKPAMNRPNLTVVTGALAHRIVIEKGEAQGVLIETDGEMRTVTAKREVILSGGAINSPHLLMLSGIGPADHLREHGISVEHDAPGVGENLQDHLDILARARTKSATSIGYSARKFPATARDVLQWALTGTGNFT 849
            A++NP+INWDYWTEPQ+ L DRKLYWPRGK LGGSSSINAMHYMRGA ENYD+WES YGA GWN D+ALEAF  VE+NENHG P+HG+ GPLNVKTI P+NPLTERYF+ACRQRQIP N DHNG RQEGFG YQVTQK GKR SAADAFL+PA+ R NLTV+T  +A RIV+E G A GV I+  GE + +TA+REVI+ GGA+NSPHLLMLSGIGPADHLREHGIS+EHD PGVG NLQDHLD++ARART+S TS+GYS +K P  A D+ QWALTG G FT
Sbjct:   54 ALSNPSINWDYWTEPQRGLRDRKLYWPRGKTLGGSSSINAMHYMRGAWENYDEWESVYGAAGWNRDSALEAFTRVEHNENHGQPWHGKAGPLNVKTIAPVNPLTERYFDACRQRQIPSNEDHNGTRQEGFGTYQVTQKDGKRCSAADAFLRPALGRENLTVLTEVMARRIVLEGGRATGVEIDHKGERKQITARREVIVCGGAVNSPHLLMLSGIGPADHLREHGISIEHDLPGVGANLQDHLDVMARARTRSTTSMGYSWKKLPENAFDIAQWALTGKGRFT 336          
BLAST of mRNA_C-australica_Contig_9920.1.1 vs. uniprot
Match: A0A550KP86_9PROT (Glucose-methanol-choline oxidoreductase n=2 Tax=Glycocaulis profundi TaxID=2518983 RepID=A0A550KP86_9PROT)

HSP 1 Score: 434 bits (1115), Expect = 1.580e-147
Identity = 209/283 (73.85%), Postives = 239/283 (84.45%), Query Frame = 1
Query:    1 AITNPAINWDYWTEPQKHLGDRKLYWPRGKALGGSSSINAMHYMRGALENYDDWESTYGAEGWNGDAALEAFKSVENNENHGAPFHGQGGPLNVKTIGPLNPLTERYFEACRQRQIPDNPDHNGARQEGFGPYQVTQKGGKRWSAADAFLKPAMNRPNLTVVTGALAHRIVIEKGEAQGVLIETDGEMRTVTAKREVILSGGAINSPHLLMLSGIGPADHLREHGISVEHDAPGVGENLQDHLDILARARTKSATSIGYSARKFPATARDVLQWALTGTGNFT 849
            A+T P INW Y TEPQ HL DR++ WPRGK LGGSSSINAMHYMRGA ENYD+WES +GA GWN + AL+AF+ VENNENHGAP+HGQGGPLNVK+I P+NPLTE Y+EACR+RQIP N D NGARQEG G YQVTQKGG+R SAADAFL+PA++RPNLTV+TGALA RI IE G A G+ IET   +  +TA+REVI+SGGA+NSP LLMLSGIGPADHLREHGISVE D PGVGENLQDHLDI+ARA T+SA SIGYS R+ P TA DV +WA+T TG+FT
Sbjct:   83 AMTEPKINWGYVTEPQTHLNDRRMLWPRGKTLGGSSSINAMHYMRGAWENYDEWESAFGATGWNRETALDAFRRVENNENHGAPWHGQGGPLNVKSIAPVNPLTELYYEACRRRQIPWNDDFNGARQEGCGVYQVTQKGGRRCSAADAFLRPALDRPNLTVLTGALARRIRIENGRATGLEIETADGVHELTARREVIVSGGALNSPQLLMLSGIGPADHLREHGISVEADLPGVGENLQDHLDIMARATTRSARSIGYSWRRLPKTAYDVSRWAITKTGDFT 365          
BLAST of mRNA_C-australica_Contig_9920.1.1 vs. uniprot
Match: UPI00036C8844 (GMC family oxidoreductase N-terminal domain-containing protein n=1 Tax=Woodsholea maritima TaxID=240237 RepID=UPI00036C8844)

HSP 1 Score: 377 bits (969), Expect = 9.220e-126
Identity = 180/283 (63.60%), Postives = 212/283 (74.91%), Query Frame = 1
Query:    1 AITNPAINWDYWTEPQKHLGDRKLYWPRGKALGGSSSINAMHYMRGALENYDDWESTYGAEGWNGDAALEAFKSVENNENHGAPFHGQGGPLNVKTIGPLNPLTERYFEACRQRQIPDNPDHNGARQEGFGPYQVTQKGGKRWSAADAFLKPAMNRPNLTVVTGALAHRIVIEKGEAQGVLIETDGEMRTVTAKREVILSGGAINSPHLLMLSGIGPADHLREHGISVEHDAPGVGENLQDHLDILARARTKSATSIGYSARKFPATARDVLQWALTGTGNFT 849
            A+T+  +NW Y T PQ HL DR+L WPRGK LGGSSSINAMHYMRGA ENYD+WE  +GA GW   AALEAFK +E+NENHGAP+HG  GPLNVK I P+NPLTE Y++AC+      NPD NG  Q G+G YQVTQ GG+R SAA AFL P + RPNLT++T  L  +++I +G+A GV IET    + + + R+V+LSGGAINSP LLMLSG+GP DHLR HGISVE D PGVG NLQDHLDILAR RTKSA SIGYS R  P  + D+LQW  +G G FT
Sbjct:   57 AVTHKGLNWGYETTPQAHLKDRRLVWPRGKTLGGSSSINAMHYMRGAYENYDEWEREFGATGWGAKAALEAFKRIESNENHGAPYHGDHGPLNVKDIYPVNPLTELYYQACKDLGYAHNPDFNGKSQSGYGVYQVTQCGGRRCSAAAAFLHPILERPNLTLLTHTLVRKVLISEGKAHGVEIETPTGPQHILSTRDVLLSGGAINSPQLLMLSGVGPGDHLRSHGISVEKDLPGVGSNLQDHLDILARIRTKSARSIGYSLRSAPRMSLDILQWLFSGDGRFT 339          
The following BLAST results are available for this feature:
BLAST of mRNA_C-australica_Contig_9920.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
UPI0003B4770B3.630e-20698.59GMC family oxidoreductase N-terminal domain-contai... [more]
A3UF68_9PROT2.260e-18387.63Glucose-methanol-choline oxidoreductase n=2 Tax=un... [more]
UPI001EDCC9021.610e-16479.15GMC family oxidoreductase N-terminal domain-contai... [more]
A0A5M6ZHD0_9PROT2.000e-16479.86Glucose-methanol-choline oxidoreductase n=1 Tax=Al... [more]
A0A4S2H4M3_9PROT1.160e-15676.33Glucose-methanol-choline oxidoreductase n=1 Tax=Ma... [more]
A0A2U2BQU7_9PROT4.670e-15675.27Glucose-methanol-choline oxidoreductase n=1 Tax=Ma... [more]
A0A0N8K3U3_9PROT9.080e-15674.91Choline dehydrogenase BetA n=4 Tax=Maricaulaceae T... [more]
A0A4S2HBM8_9PROT1.890e-15574.56Glucose-methanol-choline oxidoreductase n=1 Tax=Ma... [more]
A0A550KP86_9PROT1.580e-14773.85Glucose-methanol-choline oxidoreductase n=2 Tax=Gl... [more]
UPI00036C88449.220e-12663.60GMC family oxidoreductase N-terminal domain-contai... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-australica_Contig_9920contigC-australica_Contig_9920:3..851 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Chrysoparadoxa australica CS_1217 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog1122613.ATUP01000001_gene1890
PFAMsGMC_oxred_C,GMC_oxred_N
Model size849
Max annot lvl28211|Alphaproteobacteria
Hectar predicted targeting categoryother localisation
Exons1
Evalue5.95e-207
EggNOG OGsCOG2303@1|root,COG2303@2|Bacteria,1MV19@1224|Proteobacteria,2TQKQ@28211|Alphaproteobacteria,43W4P@69657|Hyphomonadaceae
DescriptionBelongs to the GMC oxidoreductase family
Cds size849
COG categoryE
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1682588860.6861117-CDS-C-australica_Contig_9920:2..8511682588860.6861117-CDS-C-australica_Contig_9920:2..851Chrysoparadoxa australica CS_1217CDSC-australica_Contig_9920 3..851 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_C-australica_Contig_9920.1.1prot_C-australica_Contig_9920.1.1Chrysoparadoxa australica CS_1217polypeptideC-australica_Contig_9920 3..851 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_C-australica_Contig_9920.1.1

>prot_C-australica_Contig_9920.1.1 ID=prot_C-australica_Contig_9920.1.1|Name=mRNA_C-australica_Contig_9920.1.1|organism=Chrysoparadoxa australica CS_1217|type=polypeptide|length=283bp
AITNPAINWDYWTEPQKHLGDRKLYWPRGKALGGSSSINAMHYMRGALEN
YDDWESTYGAEGWNGDAALEAFKSVENNENHGAPFHGQGGPLNVKTIGPL
NPLTERYFEACRQRQIPDNPDHNGARQEGFGPYQVTQKGGKRWSAADAFL
KPAMNRPNLTVVTGALAHRIVIEKGEAQGVLIETDGEMRTVTAKREVILS
GGAINSPHLLMLSGIGPADHLREHGISVEHDAPGVGENLQDHLDILARAR
TKSATSIGYSARKFPATARDVLQWALTGTGNFT
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mRNA from alignment at C-australica_Contig_9920:3..851-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_C-australica_Contig_9920.1.1 ID=mRNA_C-australica_Contig_9920.1.1|Name=mRNA_C-australica_Contig_9920.1.1|organism=Chrysoparadoxa australica CS_1217|type=mRNA|length=849bp|location=Sequence derived from alignment at C-australica_Contig_9920:3..851- (Chrysoparadoxa australica CS_1217)
GCCATCACCAATCCGGCGATCAACTGGGATTACTGGACCGAACCGCAGAA ACATCTCGGCGACCGCAAGCTCTACTGGCCGCGCGGCAAGGCGCTGGGCG GCTCCTCCTCGATCAACGCCATGCATTACATGCGCGGGGCGCTGGAGAAT TACGACGATTGGGAAAGCACGTACGGCGCTGAAGGCTGGAATGGCGATGC GGCGCTGGAGGCCTTCAAGTCTGTTGAAAACAACGAAAACCATGGCGCGC CCTTTCACGGTCAGGGCGGCCCGCTGAACGTGAAGACCATTGGTCCGCTC AATCCGCTGACCGAGCGCTATTTCGAGGCCTGCCGCCAGCGCCAAATTCC CGACAATCCGGATCATAACGGCGCGCGGCAAGAAGGGTTCGGCCCCTATC AAGTGACCCAGAAAGGCGGCAAACGCTGGTCTGCGGCGGACGCCTTCCTC AAACCCGCGATGAACCGGCCCAATCTGACCGTCGTCACCGGCGCCCTGGC GCATCGCATCGTGATCGAGAAGGGTGAAGCCCAGGGCGTGCTGATCGAAA CCGACGGCGAGATGCGCACCGTCACCGCCAAACGCGAAGTGATCCTGTCG GGCGGGGCGATCAATTCGCCCCATCTTCTGATGCTGTCCGGCATCGGCCC GGCCGACCATCTGCGCGAGCACGGGATCAGCGTCGAACACGATGCGCCCG GCGTCGGTGAAAACCTCCAGGATCATCTCGACATTCTGGCGCGCGCCCGT ACCAAGTCTGCGACGTCTATCGGCTATTCGGCGCGCAAATTCCCAGCGAC CGCGCGTGATGTCCTGCAATGGGCGCTGACGGGGACCGGGAATTTCACC
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Coding sequence (CDS) from alignment at C-australica_Contig_9920:3..851-

>mRNA_C-australica_Contig_9920.1.1 ID=mRNA_C-australica_Contig_9920.1.1|Name=mRNA_C-australica_Contig_9920.1.1|organism=Chrysoparadoxa australica CS_1217|type=CDS|length=849bp|location=Sequence derived from alignment at C-australica_Contig_9920:3..851- (Chrysoparadoxa australica CS_1217)
GCCATCACCAATCCGGCGATCAACTGGGATTACTGGACCGAACCGCAGAA
ACATCTCGGCGACCGCAAGCTCTACTGGCCGCGCGGCAAGGCGCTGGGCG
GCTCCTCCTCGATCAACGCCATGCATTACATGCGCGGGGCGCTGGAGAAT
TACGACGATTGGGAAAGCACGTACGGCGCTGAAGGCTGGAATGGCGATGC
GGCGCTGGAGGCCTTCAAGTCTGTTGAAAACAACGAAAACCATGGCGCGC
CCTTTCACGGTCAGGGCGGCCCGCTGAACGTGAAGACCATTGGTCCGCTC
AATCCGCTGACCGAGCGCTATTTCGAGGCCTGCCGCCAGCGCCAAATTCC
CGACAATCCGGATCATAACGGCGCGCGGCAAGAAGGGTTCGGCCCCTATC
AAGTGACCCAGAAAGGCGGCAAACGCTGGTCTGCGGCGGACGCCTTCCTC
AAACCCGCGATGAACCGGCCCAATCTGACCGTCGTCACCGGCGCCCTGGC
GCATCGCATCGTGATCGAGAAGGGTGAAGCCCAGGGCGTGCTGATCGAAA
CCGACGGCGAGATGCGCACCGTCACCGCCAAACGCGAAGTGATCCTGTCG
GGCGGGGCGATCAATTCGCCCCATCTTCTGATGCTGTCCGGCATCGGCCC
GGCCGACCATCTGCGCGAGCACGGGATCAGCGTCGAACACGATGCGCCCG
GCGTCGGTGAAAACCTCCAGGATCATCTCGACATTCTGGCGCGCGCCCGT
ACCAAGTCTGCGACGTCTATCGGCTATTCGGCGCGCAAATTCCCAGCGAC
CGCGCGTGATGTCCTGCAATGGGCGCTGACGGGGACCGGGAATTTCACC
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