mRNA_C-australica_Contig_99.6.2 (mRNA) Chrysoparadoxa australica CS_1217

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_C-australica_Contig_99.6.2
Unique NamemRNA_C-australica_Contig_99.6.2
TypemRNA
OrganismChrysoparadoxa australica CS_1217 (Chrysoparadoxa australica CS_1217)
Homology
BLAST of mRNA_C-australica_Contig_99.6.2 vs. uniprot
Match: A0A6H5K487_9PHAE (SPDS protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K487_9PHAE)

HSP 1 Score: 427 bits (1097), Expect = 1.300e-147
Identity = 218/332 (65.66%), Postives = 249/332 (75.00%), Query Frame = 2
Query:   17 MSIKDGWFRELAVMWPGQRFCLEVEKVLLQERSQFQDVLVFESTNYGKVLVLDGVIQLTERDEFAYQEMLSHIPCFAHGKPRKALIVGGGDGGVLRELARHDSLEQIDMCEIDPMVCEVTKKFEFTTATAFDDPRLNLVHEDAAEFVSRH-DSLYDVIIVDSSDPVRMSLVSLLGATVESPDGLSPVLPLSFLILTSLLPGCAKVGPAETLYQPQFYENMKRVLAPGGVIATQGECLWLHLPLIKTVLGACTDIFHTVDYAFTTIPTYPSGQIGFVLVSNTERDLSKPAATPPDELAKKLRYYTPEVHRSAFVLPAFAEREIAPVRRRHSKE 1009
            MSIKDGWF E  V+WPGQ+F LEV++VL  ERS FQDVLVF+S +YGKVLVLDGVIQLTERDE +YQEML+HIPCFA G P+K LIVGGGDGGVLRE+ARH  +E I MCEID +VCEV+++FEF TA+AF D RL LVHEDAAEFV +  +S YDVIIVDSSDPV                                       GPAETL+QP FY+NMK+ LAP GVIATQGECLWLHLPLI TVL AC +IF +VDYAFTT+P+YPSGQIGFVL S  ERDLS PA+TP   + + LRYY+PEVHR+AFVLP FAE+EIA VRRR SKE
Sbjct:    1 MSIKDGWFSETEVLWPGQKFSLEVKEVLFHERSDFQDVLVFDSVHYGKVLVLDGVIQLTERDECSYQEMLTHIPCFAQGDPKKVLIVGGGDGGVLREVARHPGVETIHMCEIDSVVCEVSRRFEFCTASAFGDARLKLVHEDAAEFVKKEGNSGYDVIIVDSSDPV---------------------------------------GPAETLFQPSFYQNMKQALAPMGVIATQGECLWLHLPLITTVLRACAEIFGSVDYAFTTVPSYPSGQIGFVLASVEERDLSTPASTPNAAMTEVLRYYSPEVHRAAFVLPVFAEKEIAGVRRRSSKE 293          
BLAST of mRNA_C-australica_Contig_99.6.2 vs. uniprot
Match: A0A835ZDK7_9STRA (Spermidine/spermine synthase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZDK7_9STRA)

HSP 1 Score: 417 bits (1072), Expect = 7.630e-144
Identity = 207/330 (62.73%), Postives = 245/330 (74.24%), Query Frame = 2
Query:   17 MSIKDGWFRELAVMWPGQRFCLEVEKVLLQERSQFQDVLVFESTNYGKVLVLDGVIQLTERDEFAYQEMLSHIPCFAHGKPRKALIVGGGDGGVLRELARHDSLEQIDMCEIDPMVCEVTKKFEFTTATAFDDPRLNLVHEDAAEFVSRH-DSLYDVIIVDSSDPVRMSLVSLLGATVESPDGLSPVLPLSFLILTSLLPGCAKVGPAETLYQPQFYENMKRVLAPGGVIATQGECLWLHLPLIKTVLGACTDIFHTVDYAFTTIPTYPSGQIGFVLVSNTERDLSKPAATPPDELAKKLRYYTPEVHRSAFVLPAFAEREIAPVRRRHS 1003
            MSI +GWF E+  MWPGQ+F L+VEKVL  E+S FQDVLVF+S  YGKVLVLDGVIQ+TERDEFAYQEML+HIPCFAH  P++ LIVGGGDGG+LRE+ARH  +E IDMCEIDPMVC+V+KKFEF+TATAF DPRL LVHEDAAEFV R  +  YDVIIVDSSDPV                                       GPAETL++P+F+ +MK  L+PGG++ATQGECLWLHL LI+ VL +C   F +++YAFTT+PTYPSGQIGFV+ S  ERDLS PA  P   +A+ LRYY+P VHRSAFVLPAFAERE++ VR+R S
Sbjct:    1 MSITNGWFSEVEAMWPGQKFSLQVEKVLFHEKSDFQDVLVFQSATYGKVLVLDGVIQVTERDEFAYQEMLTHIPCFAHPHPKRVLIVGGGDGGILREVARHACVENIDMCEIDPMVCDVSKKFEFSTATAFGDPRLRLVHEDAAEFVKREGNGQYDVIIVDSSDPV---------------------------------------GPAETLFKPEFFLSMKNALSPGGIVATQGECLWLHLKLIRGVLESCASTFTSLEYAFTTMPTYPSGQIGFVVGSTAERDLSTPAREPDAAMAQDLRYYSPAVHRSAFVLPAFAEREVSAVRKRFS 291          
BLAST of mRNA_C-australica_Contig_99.6.2 vs. uniprot
Match: A0A7S4BQS6_CHRCT (Hypothetical protein n=3 Tax=Chrysotila carterae TaxID=13221 RepID=A0A7S4BQS6_CHRCT)

HSP 1 Score: 359 bits (921), Expect = 2.520e-120
Identity = 183/326 (56.13%), Postives = 221/326 (67.79%), Query Frame = 2
Query:   23 IKDGWFRELAVMWPGQRFCLEVEKVLLQERSQFQDVLVFESTNYGKVLVLDGVIQLTERDEFAYQEMLSHIPCFAHGKPRKALIVGGGDGGVLRELARHDSLEQIDMCEIDPMVCEVTKKFEFT-TATAFDDPRLNLVHEDAAEFVSRHDSLYDVIIVDSSDPVRMSLVSLLGATVESPDGLSPVLPLSFLILTSLLPGCAKVGPAETLYQPQFYENMKRVLAPGGVIATQGECLWLHLPLIKTVLGACTDIFHTVDYAFTTIPTYPSGQIGFVLVSN-TERDLSKPAATPPDELAKKLRYYTPEVHRSAFVLPAFAEREIAPVRR 994
            I +GWFRE  VMWPGQ   L+VEK+L + RS FQDVLVF+S+ YG+VLVLDGVIQLTERDE+AYQEM++H+P  AH  P+  LIVGGGDGGVLRE+ RH  ++++ MCEIDPMVCEV KKF  T TATAFDDPR+ LVH+DAA+FV      YDV+IVDSSDPV                                       GPAETL+   FYE ++  + PG ++  QGEC+WLHL LI   L  CT +F +VDYA+TTIPTYPSGQIGF+L S  ++  L KPA  PP  L  +L+YYTP  H +AFVLP FAE+ IAPVRR
Sbjct:    2 INNGWFRENEVMWPGQAMSLQVEKILFEGRSDFQDVLVFQSSTYGRVLVLDGVIQLTERDEYAYQEMITHLPMHAHPDPQSVLIVGGGDGGVLREVCRHAGVQRVTMCEIDPMVCEVAKKFFATSTATAFDDPRVTLVHQDAAQFVKDFRDEYDVVIVDSSDPV---------------------------------------GPAETLFTSTFYEALRVAMKPGAIMCNQGECVWLHLDLIGECLHHCTKVFPSVDYAYTTIPTYPSGQIGFLLCSTASDVSLRKPARVPPSWLQSQLKYYTPAAHAAAFVLPWFAEQVIAPVRR 288          
BLAST of mRNA_C-australica_Contig_99.6.2 vs. uniprot
Match: K3WTM8_GLOUD (PABS domain-containing protein n=2 Tax=Pythiaceae TaxID=4782 RepID=K3WTM8_GLOUD)

HSP 1 Score: 357 bits (916), Expect = 5.000e-120
Identity = 181/324 (55.86%), Postives = 223/324 (68.83%), Query Frame = 2
Query:   35 WFRELAVMWPGQRFCLEVEKVLLQERSQFQDVLVFESTNYGKVLVLDGVIQLTERDEFAYQEMLSHIPCFAHGKPRKALIVGGGDGGVLRELARHDSLEQIDMCEIDPMVCEVTKKF-EFTTATAFDDPRLNLVHEDAAEFVSRHDS-LYDVIIVDSSDPVRMSLVSLLGATVESPDGLSPVLPLSFLILTSLLPGCAKVGPAETLYQPQFYENMKRVLAPGGVIATQGECLWLHLPLIKTVLGACTDIFHTVDYAFTTIPTYPSGQIGFVLVSNTERD--LSKPAATPPDELAKKLRYYTPEVHRSAFVLPAFAEREIAPVRR 994
            WF E   +WPGQ+FCLE+E+VL Q +S FQDVLVF+S  YG VLVLDGVIQ TERDEF+YQEM++H+P FAH +P+  LIVGGGDGGVLRE+ +HDS+E+I  CEIDPMVCEV+KKF + T AT+FDDPR  L+H DAA ++  + +  +DVIIVDSSDPV                                       GPAE L++ +FYENMK+ LAPGG++ TQGECLWLHL LI  VLG C + F T+ YAFTTIPTYPSGQIGF++ S  E    L KP   P  E+ + LRYY  +VH +AFVLP FAER+I+ VR+
Sbjct:   11 WFSETEALWPGQKFCLEMEEVLFQGKSDFQDVLVFKSATYGNVLVLDGVIQCTERDEFSYQEMITHLPMFAHAQPKNVLIVGGGDGGVLREVVKHDSVEKIVFCEIDPMVCEVSKKFFKNTLATSFDDPRCTLIHADAAAYLRNNTTEKFDVIIVDSSDPV---------------------------------------GPAEVLFRAEFYENMKKSLAPGGIVCTQGECLWLHLDLIVEVLGRCQNYFPTIQYAFTTIPTYPSGQIGFIVCSLDESKDALVKPKRAPTAEVQETLRYYNSKVHEAAFVLPQFAERKISTVRK 295          
BLAST of mRNA_C-australica_Contig_99.6.2 vs. uniprot
Match: F0WDX7_9STRA (Uncharacterized protein ALNC14_055480 n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0WDX7_9STRA)

HSP 1 Score: 355 bits (912), Expect = 1.640e-119
Identity = 180/331 (54.38%), Postives = 225/331 (67.98%), Query Frame = 2
Query:    8 AGLMSIKDGWFRELAVMWPGQRFCLEVEKVLLQERSQFQDVLVFESTNYGKVLVLDGVIQLTERDEFAYQEMLSHIPCFAHGKPRKALIVGGGDGGVLRELARHDSLEQIDMCEIDPMVCEVTKKFEFTT-ATAFDDPRLNLVHEDAAEFVSRHDS-LYDVIIVDSSDPVRMSLVSLLGATVESPDGLSPVLPLSFLILTSLLPGCAKVGPAETLYQPQFYENMKRVLAPGGVIATQGECLWLHLPLIKTVLGACTDIFHTVDYAFTTIPTYPSGQIGFVLVSNTERDLSKPAATPPDELAKKLRYYTPEVHRSAFVLPAFAEREIAPVRR 994
            A L   K+ WF E   +WPGQRF L++EKVL + +S FQD+LVFES+ YG VLVLDG+IQ TERDEFAYQEM+SH+P FAH +P+  LIVGGGDGGVLRE+ +HD +E+I MCEIDP VCEV+K+F  T+ A AFDD RL+L+H DAA+++    S  +DVIIVDSSDPV                                       GPA+ L+Q +FY++M+  L+  G+I TQGECLWLHL LIKTV+  C  IF TV YA+TTIPTYPSGQIGFV+ +N + DL KP   P  ++ K LRYY+P +H  AF+LPAFAER I  VR+
Sbjct:    2 ANLSDTKE-WFTETEALWPGQRFALQMEKVLYRGKSDFQDILVFESSTYGNVLVLDGIIQATERDEFAYQEMISHLPLFAHAEPKNVLIVGGGDGGVLREVVKHDCVERIVMCEIDPKVCEVSKQFFATSLAVAFDDRRLHLIHADAAKYLKDESSEKFDVIIVDSSDPV---------------------------------------GPAQVLFQTKFYQDMRDALSTDGIICTQGECLWLHLDLIKTVMSECNAIFPTVQYAYTTIPTYPSGQIGFVICANEKTDLRKPKRGPTPDMEKSLRYYSPSMHHGAFILPAFAERAIEQVRK 292          
BLAST of mRNA_C-australica_Contig_99.6.2 vs. uniprot
Match: M4C138_HYAAE (PABS domain-containing protein n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4C138_HYAAE)

HSP 1 Score: 355 bits (910), Expect = 3.540e-119
Identity = 178/324 (54.94%), Postives = 226/324 (69.75%), Query Frame = 2
Query:   35 WFRELAVMWPGQRFCLEVEKVLLQERSQFQDVLVFESTNYGKVLVLDGVIQLTERDEFAYQEMLSHIPCFAHGKPRKALIVGGGDGGVLRELARHDSLEQIDMCEIDPMVCEVTKKF-EFTTATAFDDPRLNLVHEDAAEFVSRHDS-LYDVIIVDSSDPVRMSLVSLLGATVESPDGLSPVLPLSFLILTSLLPGCAKVGPAETLYQPQFYENMKRVLAPGGVIATQGECLWLHLPLIKTVLGACTDIFHTVDYAFTTIPTYPSGQIGFVLVSNTERD--LSKPAATPPDELAKKLRYYTPEVHRSAFVLPAFAEREIAPVRR 994
            WF E   MWPGQ+F LE++ VL Q +S FQDVLVF+S  YG VLVLDGVIQLTERDEFAYQEM++H+P FAH +P++ LIVGGGDGGVLRE+ +HD +++I MCEIDPMVC V+KKF + T ATAFDDPR+ L+H DAA ++  H S  +DV+IVDSSDPV                                       GPAE LY+ +FYE+MK+ L+P GVI TQGECLWLHL LI  V+  C  +F +V+Y++TTIPTYPSGQIGF++ S  E +  L KP  TP D++ + LRYY  ++H ++FVLP+FAER+IA VR+
Sbjct:   11 WFSETEAMWPGQKFSLEIDHVLFQGKSDFQDVLVFQSATYGNVLVLDGVIQLTERDEFAYQEMITHLPLFAHKQPKRVLIVGGGDGGVLREVTKHDCVQKIVMCEIDPMVCHVSKKFFKNTVATAFDDPRVTLLHADAAVYLKEHTSDKFDVVIVDSSDPV---------------------------------------GPAEVLYRAEFYESMKKCLSPDGVICTQGECLWLHLDLIADVMQRCRALFPSVNYSYTTIPTYPSGQIGFIICSLDESEGVLVKPKRTPDDKMEQTLRYYNAKIHEASFVLPSFAERKIATVRK 295          
BLAST of mRNA_C-australica_Contig_99.6.2 vs. uniprot
Match: H3GAD3_PHYRM (PABS domain-containing protein n=10 Tax=Phytophthora TaxID=4783 RepID=H3GAD3_PHYRM)

HSP 1 Score: 353 bits (906), Expect = 1.250e-118
Identity = 177/330 (53.64%), Postives = 231/330 (70.00%), Query Frame = 2
Query:   17 MSIKDGWFRELAVMWPGQRFCLEVEKVLLQERSQFQDVLVFESTNYGKVLVLDGVIQLTERDEFAYQEMLSHIPCFAHGKPRKALIVGGGDGGVLRELARHDSLEQIDMCEIDPMVCEVTKKF-EFTTATAFDDPRLNLVHEDAAEFVSRHDS-LYDVIIVDSSDPVRMSLVSLLGATVESPDGLSPVLPLSFLILTSLLPGCAKVGPAETLYQPQFYENMKRVLAPGGVIATQGECLWLHLPLIKTVLGACTDIFHTVDYAFTTIPTYPSGQIGFVLVS--NTERDLSKPAATPPDELAKKLRYYTPEVHRSAFVLPAFAEREIAPVRR 994
            MS +  WF E   MWPGQ+F L++E+VL Q +S FQDVLVF+S  YG VLVLDGVIQLTERDEFAYQEM++H+P FAH +P++ LIVGGGDGGVLRE+ +HD ++++ MCEID MVC+V+K+F + T ATAFDDPR+ L+H DAA ++  + S  +DV+IVDSSDPV                                       GPAE LY+ +FYENMK  L+P GVI TQGECLWLHL LI  V+  C ++F TV+Y++TTIPTYPSGQIGF++ S  ++E  L+KP  TP  ++ + LRYY P++H ++FVLP+FAER+I  VR+
Sbjct:    1 MSTEKQWFSETEAMWPGQKFSLQMEEVLFQGKSDFQDVLVFKSATYGNVLVLDGVIQLTERDEFAYQEMITHLPMFAHKQPKRVLIVGGGDGGVLREVTKHDCVQEVVMCEIDAMVCDVSKQFFKDTVATAFDDPRVTLLHADAAVYLRENTSDKFDVVIVDSSDPV---------------------------------------GPAEVLYRAEFYENMKNSLSPDGVICTQGECLWLHLDLIVEVMQRCQNLFPTVNYSYTTIPTYPSGQIGFIMCSLDDSEGVLAKPKRTPDAKMEQTLRYYNPKIHEASFVLPSFAERKIVAVRK 291          
BLAST of mRNA_C-australica_Contig_99.6.2 vs. uniprot
Match: A0A7S0J2H0_9EUKA (Hypothetical protein n=2 Tax=Coccolithales TaxID=418917 RepID=A0A7S0J2H0_9EUKA)

HSP 1 Score: 354 bits (909), Expect = 3.050e-118
Identity = 176/326 (53.99%), Postives = 220/326 (67.48%), Query Frame = 2
Query:   23 IKDGWFRELAVMWPGQRFCLEVEKVLLQERSQFQDVLVFESTNYGKVLVLDGVIQLTERDEFAYQEMLSHIPCFAHGKPRKALIVGGGDGGVLRELARHDSLEQIDMCEIDPMVCEVTKKF-EFTTATAFDDPRLNLVHEDAAEFVSRHDSLYDVIIVDSSDPVRMSLVSLLGATVESPDGLSPVLPLSFLILTSLLPGCAKVGPAETLYQPQFYENMKRVLAPGGVIATQGECLWLHLPLIKTVLGACTDIFHTVDYAFTTIPTYPSGQIGFVLVSNTER-DLSKPAATPPDELAKKLRYYTPEVHRSAFVLPAFAEREIAPVRR 994
            I+DGWF E  VMWPGQ   L+VE+VL + RS FQ VLVF S  YG VLVLDGVIQ+TERDEFAYQEM++HIP FAH +P+  LIVGGGDGGVLRE+ RH  ++ + MCEIDP+VCEV+KKF   +TATAFDDPR+ LVHEDAA FV  H+  YDV+IVDSSDPV                                       GPAETL+   FYE ++  + PG ++  QGEC+WLHL LI   +G+C ++F +VDYA+TTIPTYPSGQIGF+L S      L +P  +P   + ++L+YY+P  H +AFVLP+FAER ++ VRR
Sbjct:   21 IRDGWFAENEVMWPGQAMTLKVEEVLFEGRSDFQSVLVFRSATYGNVLVLDGVIQVTERDEFAYQEMIAHIPLFAHPEPQSVLIVGGGDGGVLREVCRHSCVQHVTMCEIDPLVCEVSKKFLSKSTATAFDDPRVTLVHEDAARFVKDHEDEYDVVIVDSSDPV---------------------------------------GPAETLFTSAFYEGLRAAMRPGAIMCNQGECVWLHLELIGECMGSCKEVFPSVDYAYTTIPTYPSGQIGFLLCSTAANTSLRRPFRSPTPLVQEQLKYYSPAAHAAAFVLPSFAERVVSRVRR 307          
BLAST of mRNA_C-australica_Contig_99.6.2 vs. uniprot
Match: A0A8K1FNW5_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FNW5_PYTOL)

HSP 1 Score: 351 bits (900), Expect = 1.170e-117
Identity = 185/334 (55.39%), Postives = 224/334 (67.07%), Query Frame = 2
Query:   17 MSIKDGWFRELAVMWPGQRFCLEVEKVLLQERSQFQDVLVFESTNYGKVLVLDGVIQLTERDEFAYQEMLSHIPCFAHGKPRKALIVGGGDGGVLRELARHDSLEQIDMCEIDPMVCEVTKKFEFTT--ATAFDDPRLNLVHEDAAEFVSRHDS-LYDVIIVDSSDPVRMSLVSLLGATVESPDGLSPVLPLSFLILTSLLPGCAKVGPAETLYQPQFYENMKRVLAPGGVIATQGECLWLHLPLIKTVLGACTDIFHTVDYAFTTIPTYPSGQIGFVLVS--NTERDLSKPAATPPDELAKKLRYYTPEVHRSAFVLPAFAEREIAPVRRRHS 1003
            M+    WF E   +WPGQ+F L++E+VL Q +S FQDVLVF+S+ YG VLVLDGVIQ TERDEF+YQEM++H+P FAH  P+  LIVGGGD GVLRE+A+HDS+E+I MCEIDPMVC+V KKF FT   AT F+DPRL L+H DAA ++  + +  +DVIIVDSSDPV                                       GPAE L++ +FYENMK  L+PGG++ TQGECLWLHL LI  VL  C   F TV YAFTTIPTYPSGQIGFV+ S  ++   L KP   P DE+A  LRYY   VH +AFVLP FAER+IAPVR+  S
Sbjct:    1 MATDKQWFSETEALWPGQKFSLQMEEVLFQGKSDFQDVLVFKSSTYGNVLVLDGVIQCTERDEFSYQEMITHLPMFAHAAPKNVLIVGGGDFGVLREVAKHDSVEKIVMCEIDPMVCDVAKKF-FTNSLATTFNDPRLTLLHADAAAYLRDNTTEKFDVIIVDSSDPV---------------------------------------GPAEVLFRAEFYENMKNSLSPGGIVCTQGECLWLHLDLIAEVLTRCHAYFPTVQYAFTTIPTYPSGQIGFVMCSLDDSADALVKPKRVPSDEVAATLRYYNTRVHEAAFVLPTFAERKIAPVRKSGS 294          
BLAST of mRNA_C-australica_Contig_99.6.2 vs. uniprot
Match: A0A0P1ACQ1_PLAHL (Spermidine synthase n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1ACQ1_PLAHL)

HSP 1 Score: 348 bits (894), Expect = 8.550e-117
Identity = 175/322 (54.35%), Postives = 226/322 (70.19%), Query Frame = 2
Query:   35 WFRELAVMWPGQRFCLEVEKVLLQERSQFQDVLVFESTNYGKVLVLDGVIQLTERDEFAYQEMLSHIPCFAHGKPRKALIVGGGDGGVLRELARHDSLEQIDMCEIDPMVCEVTKKF-EFTTATAFDDPRLNLVHEDAAEFVSRHDS-LYDVIIVDSSDPVRMSLVSLLGATVESPDGLSPVLPLSFLILTSLLPGCAKVGPAETLYQPQFYENMKRVLAPGGVIATQGECLWLHLPLIKTVLGACTDIFHTVDYAFTTIPTYPSGQIGFVLVSNTERDLSKPAATPPDELAKKLRYYTPEVHRSAFVLPAFAEREIAPVRR 994
            WF E   MWPGQ+F L+VEKVL Q +S FQDVLVF+ST YG VLVLDGVIQLTERDEFAYQEM++H+P FAH +P++ LIVGGGDGGVLRE+ +HD +E+I MCEID MVC+V+KKF   T ATAF+DPR+ L+H DAA ++  + +  +DV+IVDSSDPV                                       GPAE LY+ +FY++MK  L+P GVI TQGECLWLHL LI  V+  C  +F TV+YA++TIPTYPSGQIGF++ S+ +  + KP  TP  +++K LRYY+ ++H ++FVLP FAE++IA VR+
Sbjct:   11 WFSETEAMWPGQKFALQVEKVLFQGKSDFQDVLVFKSTTYGNVLVLDGVIQLTERDEFAYQEMITHLPMFAHKQPKRVLIVGGGDGGVLREVIKHDCVEEIIMCEIDSMVCDVSKKFFTETVATAFNDPRVTLLHADAALYLHENTTNKFDVVIVDSSDPV---------------------------------------GPAEVLYKAEFYQSMKNALSPDGVICTQGECLWLHLDLIVDVMQRCQSLFSTVNYAYSTIPTYPSGQIGFIMCSSGQ-SVDKPKRTPDAKMSKTLRYYSAKIHEASFVLPGFAEQKIATVRK 292          
The following BLAST results are available for this feature:
BLAST of mRNA_C-australica_Contig_99.6.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5K487_9PHAE1.300e-14765.66SPDS protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A... [more]
A0A835ZDK7_9STRA7.630e-14462.73Spermidine/spermine synthase n=1 Tax=Tribonema min... [more]
A0A7S4BQS6_CHRCT2.520e-12056.13Hypothetical protein n=3 Tax=Chrysotila carterae T... [more]
K3WTM8_GLOUD5.000e-12055.86PABS domain-containing protein n=2 Tax=Pythiaceae ... [more]
F0WDX7_9STRA1.640e-11954.38Uncharacterized protein ALNC14_055480 n=1 Tax=Albu... [more]
M4C138_HYAAE3.540e-11954.94PABS domain-containing protein n=1 Tax=Hyaloperono... [more]
H3GAD3_PHYRM1.250e-11853.64PABS domain-containing protein n=10 Tax=Phytophtho... [more]
A0A7S0J2H0_9EUKA3.050e-11853.99Hypothetical protein n=2 Tax=Coccolithales TaxID=4... [more]
A0A8K1FNW5_PYTOL1.170e-11755.39Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A0P1ACQ1_PLAHL8.550e-11754.35Spermidine synthase n=1 Tax=Plasmopara halstedii T... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-australica_Contig_99contigC-australica_Contig_99:18978..20569 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Chrysoparadoxa australica CS_1217 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D7FKW3
Preferred nameSRM
PFAMsSpermine_synt_N,Spermine_synth
Model size1049
Max annot lvl2759|Eukaryota
KEGG rclassRC00003,RC00021,RC00053,RC00060,RC00215,RC00225
KEGG koko:K00293,ko:K00797,ko:K00802,ko:K05353
KEGG ReactionR01153,R01920,R02315,R02869,R08359
KEGG Pathwayko00270,ko00300,ko00310,ko00330,ko00410,ko00480,ko00960,ko01100,ko01110,ko01130,ko01230,map00270,map00300,map00310,map00330,map00410,map00480,map00960,map01100,map01110,map01130,map01230
KEGG ModuleM00030,M00032,M00034,M00133
Hectar predicted targeting categoryother localisation
GOsGO:0003674,GO:0003824,GO:0004766,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0005829,GO:0005886,GO:0006082,GO:0006575,GO:0006576,GO:0006595,GO:0006596,GO:0006597,GO:0006732,GO:0006766,GO:0006767,GO:0006807,GO:0008150,GO:0008152,GO:0008215,GO:0008216,GO:0008295,GO:0009058,GO:0009108,GO:0009110,GO:0009308,GO:0009309,GO:0009653,GO:0009987,GO:0010033,GO:0015939,GO:0015940,GO:0016020,GO:0016053,GO:0016740,GO:0016765,GO:0016768,GO:0017144,GO:0019752,GO:0030587,GO:0031150,GO:0031154,GO:0031288,GO:0032502,GO:0032787,GO:0034097,GO:0034641,GO:0036360,GO:0042221,GO:0042364,GO:0042398,GO:0042401,GO:0042802,GO:0042803,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043436,GO:0043603,GO:0043604,GO:0044106,GO:0044237,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046983,GO:0048856,GO:0050896,GO:0051186,GO:0051188,GO:0051703,GO:0051704,GO:0051716,GO:0070887,GO:0071310,GO:0071345,GO:0071704,GO:0071944,GO:0072330,GO:0090702,GO:0097164,GO:0099120,GO:1901564,GO:1901566,GO:1901576,GO:1990823,GO:1990830
Exons5
Evalue6.95e-149
EggNOG OGsCOG0421@1|root,KOG1562@2759|Eukaryota
EC1.5.1.10,2.1.1.53,2.5.1.16,2.5.1.22
Descriptionspermidine synthase activity
Cds size1014
COG categoryE
BRITEko00000,ko00001,ko00002,ko01000
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_C-australica_Contig_99.6.2prot_C-australica_Contig_99.6.2Chrysoparadoxa australica CS_1217polypeptideC-australica_Contig_99 18997..20553 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1682588857.1428533-UTR-C-australica_Contig_99:18977..189961682588857.1428533-UTR-C-australica_Contig_99:18977..18996Chrysoparadoxa australica CS_1217UTRC-australica_Contig_99 18978..18996 -
1682588857.2095323-UTR-C-australica_Contig_99:20553..205691682588857.2095323-UTR-C-australica_Contig_99:20553..20569Chrysoparadoxa australica CS_1217UTRC-australica_Contig_99 20554..20569 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1682588857.155641-CDS-C-australica_Contig_99:18996..190951682588857.155641-CDS-C-australica_Contig_99:18996..19095Chrysoparadoxa australica CS_1217CDSC-australica_Contig_99 18997..19095 -
1682588857.1648998-CDS-C-australica_Contig_99:19158..193761682588857.1648998-CDS-C-australica_Contig_99:19158..19376Chrysoparadoxa australica CS_1217CDSC-australica_Contig_99 19159..19376 -
1682588857.1770601-CDS-C-australica_Contig_99:19466..198181682588857.1770601-CDS-C-australica_Contig_99:19466..19818Chrysoparadoxa australica CS_1217CDSC-australica_Contig_99 19467..19818 -
1682588857.1852229-CDS-C-australica_Contig_99:20139..203401682588857.1852229-CDS-C-australica_Contig_99:20139..20340Chrysoparadoxa australica CS_1217CDSC-australica_Contig_99 20140..20340 -
1682588857.1934125-CDS-C-australica_Contig_99:20409..205531682588857.1934125-CDS-C-australica_Contig_99:20409..20553Chrysoparadoxa australica CS_1217CDSC-australica_Contig_99 20410..20553 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_C-australica_Contig_99.6.2

>prot_C-australica_Contig_99.6.2 ID=prot_C-australica_Contig_99.6.2|Name=mRNA_C-australica_Contig_99.6.2|organism=Chrysoparadoxa australica CS_1217|type=polypeptide|length=338bp
MSIKDGWFRELAVMWPGQRFCLEVEKVLLQERSQFQDVLVFESTNYGKVL
VLDGVIQLTERDEFAYQEMLSHIPCFAHGKPRKALIVGGGDGGVLRELAR
HDSLEQIDMCEIDPMVCEVTKKFEFTTATAFDDPRLNLVHEDAAEFVSRH
DSLYDVIIVDSSDPVRMSLVSLLGATVESPDGLSPVLPLSFLILTSLLPG
CAKVGPAETLYQPQFYENMKRVLAPGGVIATQGECLWLHLPLIKTVLGAC
TDIFHTVDYAFTTIPTYPSGQIGFVLVSNTERDLSKPAATPPDELAKKLR
YYTPEVHRSAFVLPAFAEREIAPVRRRHSKEEGCIIC*
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mRNA from alignment at C-australica_Contig_99:18978..20569-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_C-australica_Contig_99.6.2 ID=mRNA_C-australica_Contig_99.6.2|Name=mRNA_C-australica_Contig_99.6.2|organism=Chrysoparadoxa australica CS_1217|type=mRNA|length=1592bp|location=Sequence derived from alignment at C-australica_Contig_99:18978..20569- (Chrysoparadoxa australica CS_1217)
AGGTGCTGCTGGCCTGATGAGCATCAAAGATGGCTGGTTTCGCGAACTGG CGGTCATGTGGCCGGGACAGCGTTTCTGTCTAGAGGTGGAGAAGGTATTG CTCCAAGAGAGGAGCCAGTTCCAAGACGTGCTGGTCTTTGAGAGCACGAA CTATGGGAAGGTAGGGTATCCCCTCTGCTCTTTTGCAGTGCCTTCCATGA CTTGCGTTGGCCTTCCTCTGTTCCAATAGGTACTGGTGCTGGATGGAGTG ATCCAGCTTACTGAACGGGATGAGTTTGCCTACCAAGAGATGCTCTCCCA CATTCCGTGCTTTGCCCATGGCAAGCCGCGCAAGGCCTTGATAGTTGGTG GTGGTGATGGTGGTGTCCTGAGGGAGCTGGCTCGCCATGATAGCCTAGAG CAGATTGACATGTGCGAGATTGATCCAATGGTGGGTTAAAAGGCCAGAGG GAGAAAATATCTGAAGCATTGTGTCTAGCTGATGTGATGAGAATTGTTGC ATGTGTGTGTGTGAGAGAGAGAGAGAGCTGTTGGAATGATGGCAAGCTAG AGGTGATTGTTTTTGTGGCGCGGCACGGCTGCTCTCCCAGCCTGGGGTTG AATTATTTTGAACCTGACATTGAGCAGGCAGTAGTGAGAGCTGGGGGGAT AGGCAGGAAGAGCTGGGCAGATTTTCCCTCCTGCTCTAGTATTGGAAGGA GCTCTAACCACTCTTTCCTCTTTGACTAACCATCGGCCTCGGGACATGTA GGTGTGCGAGGTGACCAAGAAGTTTGAGTTCACGACAGCCACAGCGTTTG ATGACCCTCGACTGAACCTGGTGCACGAAGACGCAGCTGAGTTTGTCAGC CGGCATGACAGCCTCTACGACGTCATTATTGTGGACAGCTCTGATCCAGT GCGTATGAGTTTGGTCTCTCTCTTGGGCGCCACCGTTGAATCACCTGATG GCCTGTCTCCAGTTTTGCCTCTTTCTTTTCTCATCTTGACCTCCCTCTTG CCTGGTTGTGCTAAGGTGGGCCCAGCGGAGACTCTGTACCAGCCGCAGTT CTATGAGAACATGAAGAGGGTGCTTGCCCCGGGAGGGGTCATTGCCACGC AGGGTAACCACTAAACCAAATACTAACCCATGGCCATCGCTTCAATCCCT TGAAGCTCATGGCATTCTTATCACCCGGGTCCACACTTCTCAGGAGAGTG CCTATGGCTGCACTTGCCGCTCATCAAGACAGTGCTGGGAGCATGTACCG ACATCTTCCACACTGTGGACTATGCTTTCACCACCATCCCTACGTACCCG TCTGGTCAGATTGGCTTCGTCCTCGTTAGTAACACGGAGCGTGACTTGTC GAAACCTGCTGCAACCCCTCCTGATGAGCTTGCTAAGAAATTGCGCTACT ACACACCTGAGGTGGGTCTTTGCTTGCTTTTTGTCTATCCATCCCTCGCA CATTGCTCACCACCTTCTGCGCAGGTCCACAGGAGCGCCTTTGTGTTGCC TGCCTTTGCAGAGCGAGAGATCGCCCCCGTGAGACGGCGACACTCAAAAG AAGAGGGCTGCATCATTTGCTAGTTCCACATTTTATTCGGCT
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Coding sequence (CDS) from alignment at C-australica_Contig_99:18978..20569-

>mRNA_C-australica_Contig_99.6.2 ID=mRNA_C-australica_Contig_99.6.2|Name=mRNA_C-australica_Contig_99.6.2|organism=Chrysoparadoxa australica CS_1217|type=CDS|length=1014bp|location=Sequence derived from alignment at C-australica_Contig_99:18978..20569- (Chrysoparadoxa australica CS_1217)
ATGAGCATCAAAGATGGCTGGTTTCGCGAACTGGCGGTCATGTGGCCGGG
ACAGCGTTTCTGTCTAGAGGTGGAGAAGGTATTGCTCCAAGAGAGGAGCC
AGTTCCAAGACGTGCTGGTCTTTGAGAGCACGAACTATGGGAAGGTACTG
GTGCTGGATGGAGTGATCCAGCTTACTGAACGGGATGAGTTTGCCTACCA
AGAGATGCTCTCCCACATTCCGTGCTTTGCCCATGGCAAGCCGCGCAAGG
CCTTGATAGTTGGTGGTGGTGATGGTGGTGTCCTGAGGGAGCTGGCTCGC
CATGATAGCCTAGAGCAGATTGACATGTGCGAGATTGATCCAATGGTGTG
CGAGGTGACCAAGAAGTTTGAGTTCACGACAGCCACAGCGTTTGATGACC
CTCGACTGAACCTGGTGCACGAAGACGCAGCTGAGTTTGTCAGCCGGCAT
GACAGCCTCTACGACGTCATTATTGTGGACAGCTCTGATCCAGTGCGTAT
GAGTTTGGTCTCTCTCTTGGGCGCCACCGTTGAATCACCTGATGGCCTGT
CTCCAGTTTTGCCTCTTTCTTTTCTCATCTTGACCTCCCTCTTGCCTGGT
TGTGCTAAGGTGGGCCCAGCGGAGACTCTGTACCAGCCGCAGTTCTATGA
GAACATGAAGAGGGTGCTTGCCCCGGGAGGGGTCATTGCCACGCAGGGAG
AGTGCCTATGGCTGCACTTGCCGCTCATCAAGACAGTGCTGGGAGCATGT
ACCGACATCTTCCACACTGTGGACTATGCTTTCACCACCATCCCTACGTA
CCCGTCTGGTCAGATTGGCTTCGTCCTCGTTAGTAACACGGAGCGTGACT
TGTCGAAACCTGCTGCAACCCCTCCTGATGAGCTTGCTAAGAAATTGCGC
TACTACACACCTGAGGTCCACAGGAGCGCCTTTGTGTTGCCTGCCTTTGC
AGAGCGAGAGATCGCCCCCGTGAGACGGCGACACTCAAAAGAAGAGGGCT
GCATCATTTGCTAG
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