mRNA_C-australica_Contig_989.5.2 (mRNA) Chrysoparadoxa australica CS_1217
You are viewing an mRNA, more information available on the corresponding polypeptide page
Overview
Homology
BLAST of mRNA_C-australica_Contig_989.5.2 vs. uniprot
Match: A0A6H5KB35_9PHAE (Nudix hydrolase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KB35_9PHAE) HSP 1 Score: 117 bits (292), Expect = 3.660e-27 Identity = 72/148 (48.65%), Postives = 91/148 (61.49%), Query Frame = 3 Query: 420 KPARTGRLQQRYDDQGCRLLTGTVPLITAGDGSISVVMVKSKRRSDWTLPKGGWEDDESAEEGAAREAYEEAGVLGKVGARLGTFEFSSRSNPGRTNRLTMFLLKVDEVLKEWPEDERDRTMVTLTEAMATAARPEVAAALKAAAAQV 863 +PAR GR + RYD RL+ G +P+ G +V++ S +R+DW LPKGGW+ DE+A E A REAYEEAGV G V A LG E S + G +R MF L V +VL EWPE R R +VTL EA+ RPEV + L+A A V Sbjct: 2 EPARQGREKCRYDGD-TRLVAGCLPVTPDG----RLVLIGSLKRTDWILPKGGWDTDETAAEAAVREAYEEAGVKGLVTADLGPHEIVS--SRGNKSRAAMFALLVSDVLDEWPEKHRRRKVVTLEEALLLCTRPEVVSVLQAYATLV 142
BLAST of mRNA_C-australica_Contig_989.5.2 vs. uniprot
Match: A0A087G6T3_ARAAL (Nudix hydrolase domain-containing protein n=1 Tax=Arabis alpina TaxID=50452 RepID=A0A087G6T3_ARAAL) HSP 1 Score: 102 bits (254), Expect = 1.320e-21 Identity = 61/141 (43.26%), Postives = 83/141 (58.87%), Query Frame = 3 Query: 426 ARTGRLQQRYDDQGCRLLTGTVPLI-----TAGDGS----ISVVMVKSKRRSDWTLPKGGWEDDESAEEGAAREAYEEAGVLGKVGARLGTFEFSSRSN-----PGRTNRLTMFLLKVDEVLKEWPEDERDRTMVTLTEAM 806 ARTGRLQQRY++ GCRL+ G +P GD + + V+M+ S PKGGWE+DE+ E AAREA EEAGV G + LG +EF S+S+ P + ++ L V+E L+ WPE R RT +T+ EA+ Sbjct: 6 ARTGRLQQRYEN-GCRLIAGCIPFRYRNSEEIGDSNTGKVVQVLMISSSSGPGLLFPKGGWENDETVREAAAREAVEEAGVRGTLMDLLGEYEFKSKSHQDEFCPEGVCKAAVYALYVNEELESWPEQTRSRTWLTIPEAL 145
BLAST of mRNA_C-australica_Contig_989.5.2 vs. uniprot
Match: F2UHF6_SALR5 (Nudix hydrolase domain-containing protein n=1 Tax=Salpingoeca rosetta (strain ATCC 50818 / BSB-021) TaxID=946362 RepID=F2UHF6_SALR5) HSP 1 Score: 103 bits (257), Expect = 4.050e-21 Identity = 61/133 (45.86%), Postives = 79/133 (59.40%), Query Frame = 3 Query: 411 PAYKPARTGRLQQRYDDQGCRLLTGTVPLITAGDGSISVVMVKSKRRSDWTLPKGGWEDDESAEEGAAREAYEEAGVLGKVGARLGTFEFSSRSNPGRTNRLTMFLLKVDEVLKEWPEDE-RDRTMVTLTEAM 806 P PAR GR QRY+ G RL+ G VP T G+ V+++ + ++ W +PKGGWE DE+ E AAREAYEEAGVLG VGA L E+ +S P R F L+V +L EWPE R R V + +A+ Sbjct: 19 PDQPPARVGRDNQRYECNGTRLVAGCVPYRTH-TGTPEVMLITNHKKDKWIIPKGGWERDETETEAAAREAYEEAGVLGAVGACLVDCEYMGKSGPQRHR---YFALQVSSMLDEWPEANFRTRKWVPIDQAL 147
BLAST of mRNA_C-australica_Contig_989.5.2 vs. uniprot
Match: A0A7S1U8G6_9STRA (Hypothetical protein n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1U8G6_9STRA) HSP 1 Score: 103 bits (257), Expect = 4.880e-21 Identity = 64/142 (45.07%), Postives = 84/142 (59.15%), Query Frame = 3 Query: 384 QSPAMEAASPAYKPARTGRLQQRYDDQGCRLLTGTVPLITAGDGSISVVMVKSKRRSDWTLPKGGWEDDESAEEGAAREAYEEAGVLGKVGAR--LGTFEFSSRSNPGRTNRLTMFLLKVDEVLKEWPEDERDRTMVTLTEA 803 ++P ++ PAR GR +QR++ RL G VP++ +VV++KS++R +W LPKGGWE DE+ E AARE YEEAGV G V L T +SR G + R +LL V EVL EWPE RDR MV + EA Sbjct: 80 KTPKQQSFHDGMVPARRGREKQRFECS-TRLCAGVVPVLKG-----NVVLIKSQKRKEWILPKGGWESDETIEAAAARECYEEAGVRGTVNPERYLETVHMNSR---GVSCRTRFYLLDVTEVLDEWPEMHRDRKMVPVDEA 212
BLAST of mRNA_C-australica_Contig_989.5.2 vs. uniprot
Match: A0A2G5EWK5_AQUCA (Nudix hydrolase domain-containing protein n=2 Tax=Thalictroideae TaxID=1463137 RepID=A0A2G5EWK5_AQUCA) HSP 1 Score: 100 bits (248), Expect = 1.290e-20 Identity = 64/147 (43.54%), Postives = 84/147 (57.14%), Query Frame = 3 Query: 426 ARTGRLQQRYDDQGCRLLTGTVPL--ITAGDGS------ISVVMVKSKRRSDWTLPKGGWEDDESAEEGAAREAYEEAGVLGKVGARLGTFEFSSRSN-----PGRTNRLTMFLLKVDEVLKEWPEDE-RDRTMVTLTEAMATAARP 824 ARTGRLQQRY+D GCRL+ G +P I + + S I V+M+ S + PKGGWE+DE+ EE AAREA+EEAGV G++ LG + F S+++ P + MF L V E L WPE R R +T+ EA P Sbjct: 6 ARTGRLQQRYED-GCRLVAGCIPFKYIDSDENSDDKSKQIVVLMINSPSGPGFLFPKGGWENDETVEEAAAREAWEEAGVRGEIMESLGCYLFKSKTHQDEFSPEGLCKAKMFALLVKEELSSWPEQSTRQRRWLTIPEAAENCRHP 151
BLAST of mRNA_C-australica_Contig_989.5.2 vs. uniprot
Match: A0A2T4BL72_9HYPO (Nudix hydrolase domain-containing protein n=1 Tax=Trichoderma citrinoviride TaxID=58853 RepID=A0A2T4BL72_9HYPO) HSP 1 Score: 98.6 bits (244), Expect = 2.280e-20 Identity = 64/145 (44.14%), Postives = 84/145 (57.93%), Query Frame = 3 Query: 426 ARTGRLQQRYDDQGCRLLTGTVPLITAGDGSISVVMVKSKRRSDWTLPKGGWEDDESAEEGAAREAYEEAGVLGKVGARLGTFEFSSRSNPGRTN----RLTMFLLKVDEVLKEWPE-DERDRTMVTLTEAMATAA-RPEVAAAL 842 +RTGR +QRY+ QG RL+ G VPL + V++++S RR W LPKGGWE DES EE A REA+EEAG+ + LG FE P +T+ R F V + L WPE D+R+R T T+A+ RPE+ AL Sbjct: 18 SRTGRSKQRYNAQGERLVAGVVPL---SEDRNRVILIQSTRRKGWVLPKGGWESDESCEESAVREAWEEAGITVNIEHDLGNFE---EKRPPKTSKDRSRYYFFQGTVLDQLDNWPEKDKRERGWFTYTQAIEVLVNRPELQEAL 156
BLAST of mRNA_C-australica_Contig_989.5.2 vs. uniprot
Match: D8LPS9_ECTSI (Nudix hydrolase domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LPS9_ECTSI) HSP 1 Score: 98.2 bits (243), Expect = 2.380e-20 Identity = 58/120 (48.33%), Postives = 73/120 (60.83%), Query Frame = 3 Query: 420 KPARTGRLQQRYDDQGCRLLTGTVPLITAGDGSISVVMVKSKRRSDWTLPKGGWEDDESAEEGAAREAYEEAGVLGKVGARLGTFEFSSRSNPGRTNRLTMFLLKVDEVLKEWPEDERDR 779 +PAR GR + RYD RL+ G +P+ G +V++ S + +DW LPKGGW+ DE+A E A REAYEEAGV G V A LG E S + G +R MF L V +VL EWPE R R Sbjct: 2 EPARQGREKCRYDGD-TRLVAGCLPVTPDG----RLVLIGSVKHTDWILPKGGWDTDETAAEAAVREAYEEAGVKGLVTADLGPHEIVS--SRGNKSRAAMFALLVSDVLDEWPEKHRRR 114
BLAST of mRNA_C-australica_Contig_989.5.2 vs. uniprot
Match: A0A084AW66_STACB (Nudix hydrolase domain-containing protein n=3 Tax=Stachybotrys TaxID=74721 RepID=A0A084AW66_STACB) HSP 1 Score: 98.2 bits (243), Expect = 2.950e-20 Identity = 62/143 (43.36%), Postives = 86/143 (60.14%), Query Frame = 3 Query: 426 ARTGRLQQRYDDQGCRLLTGTVPLITAGDGSISVVMVKSKRRSDWTLPKGGWEDDESAEEGAAREAYEEAGVLGKVGARLGTFEFSSRSNPGRT-NRLTMFLLKVDEVLKEWPED-ERDRTMVTLTEAMAT-AARPEVAAALK 845 +R GR +QRY+ +G RL+ G VPL S V++++S RR W LPKGGWE DE+ ++ AAREA+EEAG+ +V LG FE + +R F V L +WPE +R+R T T+AM T A+RPE+ AL+ Sbjct: 16 SRIGRSKQRYNSKGERLVAGVVPLTA---DSNYVLLIQSNRRKGWVLPKGGWESDETCQDAAAREAWEEAGISIQVDYDLGNFEEKRPPKSSKERSRYYFFQATVLSELDDWPEKHKRERQWFTYTQAMETLASRPELQEALE 155
BLAST of mRNA_C-australica_Contig_989.5.2 vs. uniprot
Match: G9MGI4_HYPVG (Nudix hydrolase domain-containing protein n=14 Tax=Trichoderma TaxID=5543 RepID=G9MGI4_HYPVG) HSP 1 Score: 98.2 bits (243), Expect = 3.110e-20 Identity = 64/145 (44.14%), Postives = 87/145 (60.00%), Query Frame = 3 Query: 426 ARTGRLQQRYDDQGCRLLTGTVPLITAGDGSISVVMVKSKRRSDWTLPKGGWEDDESAEEGAAREAYEEAGVLGKVGARLGTFEFSSRSNPGRTN----RLTMFLLKVDEVLKEWPE-DERDRTMVTLTEAMATAA-RPEVAAAL 842 +RTGR +QRY+ QG RL+ G VPL + D + V++++S RR W LPKGGWE DES +E A REA+EEAG+ + LG FE P +T+ R + V + L EWPE D+R+R T T+A+ RPE+ AL Sbjct: 18 SRTGRSKQRYNSQGERLVAGIVPL--SADRN-HVILIQSTRRKGWVLPKGGWESDESCQESAVREAWEEAGITVNIDYDLGNFE---EKRPPKTSKDRSRYYFYQGTVLDQLDEWPEKDKREREWFTYTKAIEVLVNRPELQEAL 156
BLAST of mRNA_C-australica_Contig_989.5.2 vs. uniprot
Match: A0A218X1W6_PUNGR (nudix hydrolase 16, mitochondrial n=1 Tax=Punica granatum TaxID=22663 RepID=A0A218X1W6_PUNGR) HSP 1 Score: 98.6 bits (244), Expect = 3.370e-20 Identity = 63/153 (41.18%), Postives = 87/153 (56.86%), Query Frame = 3 Query: 426 ARTGRLQQRYDDQGCRLLTGTVPL----ITAGDGS----ISVVMVKSKRRSDWTLPKGGWEDDESAEEGAAREAYEEAGVLGKVGARLGTFEFSSRSN-----PGRTNRLTMFLLKVDEVLKEWPEDE-RDRTMVTLTEAMATAARPEVAAAL 842 ARTGR QQRY+ GCRL+ G +P + GD + I V+M+ S PKGGWE+DE+ +E A REA EEAGV G + LG ++F S+++ P + MF L V E LK WPE R+R+ +T+ EA+ + P + AL Sbjct: 6 ARTGRHQQRYE-AGCRLVAGCIPYRYRSVDCGDSTDEKIIEVLMINSTSGPGLLFPKGGWENDETVDEAAIREAIEEAGVKGDIKGLLGHYDFKSKTHQDEFCPEGLCKAAMFALLVKEELKSWPEQSIRERSWLTIPEAIESCRHPWMREAL 157 The following BLAST results are available for this feature:
BLAST of mRNA_C-australica_Contig_989.5.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-australica_Contig_989.5.2 >prot_C-australica_Contig_989.5.2 ID=prot_C-australica_Contig_989.5.2|Name=mRNA_C-australica_Contig_989.5.2|organism=Chrysoparadoxa australica CS_1217|type=polypeptide|length=194bp MHVLPTAYPLHAPSLPSPRPSQDFVAQSPAMEAASPAYKPARTGRLQQRYback to top mRNA from alignment at C-australica_Contig_989:10659..13111+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-australica_Contig_989.5.2 ID=mRNA_C-australica_Contig_989.5.2|Name=mRNA_C-australica_Contig_989.5.2|organism=Chrysoparadoxa australica CS_1217|type=mRNA|length=2453bp|location=Sequence derived from alignment at C-australica_Contig_989:10659..13111+ (Chrysoparadoxa australica CS_1217)back to top Coding sequence (CDS) from alignment at C-australica_Contig_989:10659..13111+ >mRNA_C-australica_Contig_989.5.2 ID=mRNA_C-australica_Contig_989.5.2|Name=mRNA_C-australica_Contig_989.5.2|organism=Chrysoparadoxa australica CS_1217|type=CDS|length=582bp|location=Sequence derived from alignment at C-australica_Contig_989:10659..13111+ (Chrysoparadoxa australica CS_1217)back to top |