mRNA_C-australica_Contig_9879.1.1 (mRNA) Chrysoparadoxa australica CS_1217

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_C-australica_Contig_9879.1.1
Unique NamemRNA_C-australica_Contig_9879.1.1
TypemRNA
OrganismChrysoparadoxa australica CS_1217 (Chrysoparadoxa australica CS_1217)
Homology
BLAST of mRNA_C-australica_Contig_9879.1.1 vs. uniprot
Match: A0A2E9W8I6_9PROT (TonB-dependent receptor n=2 Tax=Alphaproteobacteria TaxID=28211 RepID=A0A2E9W8I6_9PROT)

HSP 1 Score: 409 bits (1052), Expect = 7.080e-137
Identity = 194/284 (68.31%), Postives = 234/284 (82.39%), Query Frame = 1
Query:    1 ANTFTNRLGTITTGLDFYHDEATGTRQGRIGAASEAGTSSERASNVGAFAQFRVPVTDEWRMSFGGRVDNQWFHGTDGADHFNYGFSGNANTEYDAFEWLTAYAGAGTTFGGIPLGEAAIYDFSAIWTSGGVSPSRSYNFKTGLNAEYEGFTGSLGLFYNDIEDDHDLSSYRRSTAFDLVTRGFTLGAGYRYQDAFVKGNWSHTIVRMDGVPPSSGSAAYFGQLQGDLFSLEAGYEFTDYGGRTGATSEMALRNDEVEELPLPGYVVVNLYTEYTPKQAEFLTL 852
            ANTFT  L  +TTG+DFY+DEA GT +G+ GAA+  GTSSE A+N+G FAQ RVPVTDE+R+S GGRVDNQWF GTD ++ FNYGFSGN N EYD   WLTAYAG GTTFGGIPLGE+AIY+FS IWT GG+ PSRSYNFKTGLNAEYEGF GS+GLFYN+I+DD DLS+  R+ A+DL+TRGFT+ AGY +  AFV+GNWSHTIVR+DGVPPSS +AA++GQ  GD+FSLE GY + + G  TGA+SE  LRND+V E P+PGYVV NLY+E+TP  AE+++L
Sbjct:  318 ANTFTTDLAAVTTGIDFYNDEAVGTYEGKPGAANTPGTSSEEATNIGVFAQARVPVTDEFRLSLGGRVDNQWFTGTDKSELFNYGFSGNVNAEYDVQNWLTAYAGTGTTFGGIPLGESAIYNFSGIWTYGGLQPSRSYNFKTGLNAEYEGFKGSVGLFYNEIKDDQDLSNANRTVAYDLMTRGFTVNAGYDFDQAFVRGNWSHTIVRLDGVPPSSTTAAFYGQQIGDMFSLEGGYSWDNIGLTTGASSEFVLRNDDVAEAPMPGYVVFNLYSEWTPTFAEYVSL 601          
BLAST of mRNA_C-australica_Contig_9879.1.1 vs. uniprot
Match: A0A2N3KXC6_9PROT (TonB-dependent receptor n=2 Tax=Thalassospira marina TaxID=2048283 RepID=A0A2N3KXC6_9PROT)

HSP 1 Score: 273 bits (697), Expect = 2.060e-83
Identity = 137/280 (48.93%), Postives = 181/280 (64.64%), Query Frame = 1
Query:    1 ANTFTNRLGTITTGLDFYHDEATGTRQGRIGAASEAGTSSERASNVGAFAQFRVPVTDEWRMSFGGRVDNQWFHGTDGADHFNYGFSGNANTEYDAFEWLTAYAGAGTTFGGIPLGEAAIYDFSAIWTSGGVSPSRSYNFKTGLNAEYEGFTGSLGLFYNDIEDDHDLSSYRRSTAFDLVTRGFTLGAGYRYQDAFVKGNWSHTIVRMDGVPPSSGSAAYFGQLQGDLFSLEAGYEFTDYGGRTGATSEMALRNDEVE---ELPLPGYVVVNLYTEYTPK 831
            AN F   +G + TG+DFYHDEATGT        + AGT  E+++N+G F+Q R+ +TD WR SFGGR D QWF G DG +    G S NANTEYD     T Y GAGT FGG+P+GE+AIY+F+ +W     +PSRS+N+K G    ++  T    +FYN IE  HDLSS  R T  DLVTRG  L   Y++  A+++  +SHTIVR DG PP S ++A+ G L GD+ +L+AG E+ D G R G +SE+ALRND+ +   E P+  Y V NLY E+TP+
Sbjct:  350 ANNFDVGIGKVNTGIDFYHDEATGTHDN----GARAGTYKEKSTNIGLFSQARLNLTDRWRTSFGGRFDRQWFTGIDGTEFDEQGLSANANTEYDILPNTTLYGGAGTAFGGLPIGESAIYNFTGVWDYSDFAPSRSFNYKAGSRVTFDRLTLDGNVFYNRIERSHDLSSVDRQTTADLVTRGINLSGTYQFDTAYIRTTYSHTIVRADGAPPVSTASAWQGVLLGDIITLDAGKEWRDLGLRAGMSSELALRNDDPKKYGEQPIDTYFVANLYGEWTPE 625          
BLAST of mRNA_C-australica_Contig_9879.1.1 vs. uniprot
Match: A0A154L625_9PROT (TonB-dependent receptor n=6 Tax=Thalassospira TaxID=168934 RepID=A0A154L625_9PROT)

HSP 1 Score: 272 bits (696), Expect = 3.220e-83
Identity = 143/286 (50.00%), Postives = 178/286 (62.24%), Query Frame = 1
Query:    1 ANTFTNRLGTITTGLDFYHDEATGTRQGRIGAASEAGTSSERASNVGAFAQFRVPVTDEWRMSFGGRVDNQWFHGTDGADHFNYGFSGNANTEYDAFEWLTAYAGAGTTFGGIPLGEAAIYDFSAIWTSGGVSPSRSYNFKTGLNAEYEGFTGSLGLFYNDIEDDHDL------SSYRRSTAFDLVTRGFTLGAGYRYQDAFVKGNWSHTIVRMDGVPPSSGSAAYFGQLQGDLFSLEAGYEFTDYGGRTGATSEMALRNDEVEELPLPG---YVVVNLYTEYTPK 831
            ANTF   +G +T GLDFYHDEATGT           G+ SE  +N+GAF+Q R+ +TD WR+SFGGR D QWF G DG D   +G SGN NTEYD  E +T Y GAGT FGG+PLGE+AIY+FS +W   G SPSRS NFK G      G++    +FYN I+D HDL      S+  R+T  DLVT+G+ L A Y Y   F +  +SHT V  DG  P S +A+Y G LQGD+F+ E  + + D G R G TSE+AL ND+ EE   P    Y V NLY E+ P+
Sbjct:  348 ANTFDVGMGDVTAGLDFYHDEATGTHD----RTPRDGSYSETTTNIGAFSQARLSLTDAWRVSFGGRADRQWFEGVDGTDFEEFGLSGNVNTEYDVVETVTVYGGAGTQFGGLPLGESAIYNFSGVWNYDGFSPSRSKNFKVGTRYSEGGWSLDGNVFYNKIDDSHDLTGSVVGSTVYRNTTIDLVTQGYNLSAAYNYGPGFARVTYSHTDVETDGDAPLSTNASYQGVLQGDIFTFEVAHGWDDLGVRVGTTSELALANDDPEENGFPKLDTYFVANLYGEWKPE 629          
BLAST of mRNA_C-australica_Contig_9879.1.1 vs. uniprot
Match: A0A1Y2LB68_9PROT (TonB-dependent receptor n=1 Tax=Thalassospira alkalitolerans TaxID=1293890 RepID=A0A1Y2LB68_9PROT)

HSP 1 Score: 271 bits (694), Expect = 6.100e-83
Identity = 144/293 (49.15%), Postives = 184/293 (62.80%), Query Frame = 1
Query:    1 ANTFTNRLGTITTGLDFYHDEATGTRQGRIGAASEAGTSSERASNVGAFAQFRVPVTDEWRMSFGGRVDNQWFHGTDGADHFNYGFSGNANTEYDAFEWLTAYAGAGTTFGGIPLGEAAIYDFSAIWTSGGVSPSRSYNFKTGLNAEYEGFTGSLGLFYNDIEDDHDL------SSYRRSTAFDLVTRGFTLGAGYRYQDAFVKGNWSHTIVRMDGVPPSSGSAAYFGQLQGDLFSLEAGYEFTDYGGRTGATSEMALRNDEVEELPLPG---YVVVNLYTEYTPKQAEFLTL 852
            ANTF   +G +T GLDFYHDEATG++      +  AGT SE  +N+GAF+Q R+ + D+WR+SFGGR D QWF G DG +   +G SGN NTEYD  E +T Y GAGT FGG+PLGE+AIY+FS IW   G SPSRS N K G       +     LFYN I+D HDL      S+  R++  DLVT+G+ L + Y Y   F +  +SHT V  +G  P S +A+Y G LQGD+FSLE G+ + D G R G+TSE+AL ND+ E+   P    Y V NLY E+TP     +TL
Sbjct:  347 ANTFDIGMGDVTAGLDFYHDEATGSQN----RSPRAGTYSETTTNIGAFSQARLSLADDWRVSFGGRADRQWFEGLDGTEFEEFGLSGNVNTEYDVIETVTVYGGAGTQFGGLPLGESAIYNFSGIWNYDGFSPSRSKNIKAGARYTEGDWAFDGNLFYNKIDDSHDLTGTVVGSTVIRNSTIDLVTKGYNLSSTYNYGPGFARLTYSHTDVETNGGAPLSTNASYQGVLQGDMFSLEIGHSWDDLGLRVGSTSELALSNDDPEKNGFPKLDTYFVTNLYGEWTPASLSAVTL 635          
BLAST of mRNA_C-australica_Contig_9879.1.1 vs. uniprot
Match: A0A1Y2KXW1_9PROT (TonB-dependent receptor n=2 Tax=Thalassospira TaxID=168934 RepID=A0A1Y2KXW1_9PROT)

HSP 1 Score: 270 bits (690), Expect = 2.230e-82
Identity = 132/280 (47.14%), Postives = 181/280 (64.64%), Query Frame = 1
Query:    1 ANTFTNRLGTITTGLDFYHDEATGTRQGRIGAASEAGTSSERASNVGAFAQFRVPVTDEWRMSFGGRVDNQWFHGTDGADHFNYGFSGNANTEYDAFEWLTAYAGAGTTFGGIPLGEAAIYDFSAIWTSGGVSPSRSYNFKTGLNAEYEGFTGSLGLFYNDIEDDHDLSSYRRSTAFDLVTRGFTLGAGYRYQDAFVKGNWSHTIVRMDGVPPSSGSAAYFGQLQGDLFSLEAGYEFTDYGGRTGATSEMALRNDEVEEL---PLPGYVVVNLYTEYTPK 831
            AN F   +G + TG+DFYHDEATGT        + AG+ +E+++N+G F+Q R+ +TD WR SFGGR D QWF G DG++    G SGN NTEYD     T Y GAGT FGG+P+GE+ IY+FS +W   G +PSRS+N+K G    ++  T    +FYN IE  HDLS   R T  DL TRG  L   Y++  A+++  ++HTIVR DG PP S ++A+ G L GD+ +++AG E+ D G R G +SE+AL+ND+ E+    P+  Y V NLY E+TP+
Sbjct:  350 ANNFDVGIGKVNTGIDFYHDEATGTHNN----GTRAGSYTEKSTNIGVFSQARLDLTDRWRTSFGGRFDRQWFTGIDGSEFDEQGLSGNVNTEYDILSNTTIYGGAGTAFGGLPIGESNIYNFSGVWDYAGFAPSRSFNYKAGSRVTFDRLTLDGNVFYNRIERSHDLSDTDRQTTVDLATRGINLSGTYQFDTAYIRATYTHTIVRSDGAPPVSTASAWQGVLLGDIITIDAGKEWHDLGLRAGMSSELALKNDDPEKYGAEPIDTYFVANLYGEWTPE 625          
BLAST of mRNA_C-australica_Contig_9879.1.1 vs. uniprot
Match: A0A199Y3H6_9PROT (TonB-dependent receptor n=1 Tax=Thalassospira profundimaris TaxID=502049 RepID=A0A199Y3H6_9PROT)

HSP 1 Score: 265 bits (676), Expect = 2.390e-80
Identity = 137/279 (49.10%), Postives = 174/279 (62.37%), Query Frame = 1
Query:    1 ANTFTNRLGTITTGLDFYHDEATGTRQGRIGAASEAGTSSERASNVGAFAQFRVPVTDEWRMSFGGRVDNQWFHGTDGADHFNYGFSGNANTEYDAFEWLTAYAGAGTTFGGIPLGEAAIYDFSAIWTSGGVSPSRSYNFKTGLNAEYEGFTGSLGLFYNDIEDDHDLSSYRRSTAFDLVTRGFTLGAGYRYQDAFVKGNWSHTIVRMDGVPPSSGSAAYFGQLQGDLFSLEAGYEFTDYGGRTGATSEMALRNDEVEEL---PLPGYVVVNLYTEYTP 828
            ANTF   +G +T G DFYHDEATG        A  AG  +E ++N+G F+Q R+ +TD WR+SFGGR D QWF G DG D   +G SGNANTEYD  + + AY G GTTFGG+PLGE+AIY++S IW   G SPSRSYN K G     + +     LFYN I + HDLS+  R+T  DL TRG  L A Y Y   +V+  ++HT V+ DG  P S SAAY G + GD+ +++A + F DYG R G  SE+AL +D  E+     L  Y V NLY E+ P
Sbjct:  343 ANTFDVGMGDLTAGFDFYHDEATGGGD-TARPAGRAGRFTETSTNIGVFSQARLSLTDRWRVSFGGRGDQQWFEGIDGTDFSEFGLSGNANTEYDVTDAVMAYGGLGTTFGGLPLGESAIYNYSGIWNYSGFSPSRSYNAKLGSRVTLQDWAFDGNLFYNLINESHDLSTSNRNTTVDLDTRGVNLSATYTYGPGYVRAGYTHTNVKSDGAVPVSTSAAYQGVIVGDIINIDAAHRFDDYGIRIGGNSELALSDDSPEDNGNEKLDSYFVANLYAEWVP 620          
BLAST of mRNA_C-australica_Contig_9879.1.1 vs. uniprot
Match: UPI00051A3A75 (TonB-dependent receptor n=1 Tax=Thalassospira australica TaxID=1528106 RepID=UPI00051A3A75)

HSP 1 Score: 260 bits (665), Expect = 1.000e-78
Identity = 135/279 (48.39%), Postives = 178/279 (63.80%), Query Frame = 1
Query:    1 ANTFTNRLGTITTGLDFYHDEATGTRQGRIGAASEAGTSSERASNVGAFAQFRVPVTDEWRMSFGGRVDNQWFHGTDGADHFNYGFSGNANTEYDAFEWLTAYAGAGTTFGGIPLGEAAIYDFSAIWTSGGVSPSRSYNFKTGLNAEYEGFTGSLGLFYNDIEDDHDLSSYRRSTAFDLVTRGFTLGAGYRYQDAFVKGNWSHTIVRMDGVPPSSGSAAYFGQLQGDLFSLEAGYEFTDYGGRTGATSEMALRNDEVEEL---PLPGYVVVNLYTEYTP 828
            ANTF   +G +T G+DFYHDEATG       +A +AG  +E ++N+G F+Q R+ +TD WR+SFGGR D QWF G DG D   +G SGNANTE+D  + + AY G GTTFGG+PLGE+AIY++SAIW   G SPSRSYN K G     + +     LFYN I++ HDLS+  R+T  DL TRG  L A Y Y   +V+  ++HT V+ DG  P S SA+Y G + GD+ +++A + F  YG R G  SE+AL +D  E+     L  Y V NLY E+ P
Sbjct:  343 ANTFDVGMGDLTAGVDFYHDEATGGGD-TARSAGQAGRFTETSTNIGVFSQARLSLTDRWRVSFGGRGDQQWFEGIDGTDFSEFGLSGNANTEFDVTDNVMAYGGFGTTFGGLPLGESAIYNYSAIWDYTGFSPSRSYNAKLGSRVTLQDWAFDGNLFYNLIDESHDLSTSDRNTTVDLDTRGVNLSATYTYGPGYVRAGYTHTNVKSDGAVPVSTSASYQGVIVGDIINIDAAHSFDAYGVRVGGNSELALSDDSPEDNGSDELDTYFVANLYAEWVP 620          
BLAST of mRNA_C-australica_Contig_9879.1.1 vs. uniprot
Match: A0A154VF21_9PROT (TonB-dependent receptor n=5 Tax=Thalassospira TaxID=168934 RepID=A0A154VF21_9PROT)

HSP 1 Score: 258 bits (658), Expect = 1.030e-77
Identity = 139/281 (49.47%), Postives = 171/281 (60.85%), Query Frame = 1
Query:    1 ANTFTNRLGTITTGLDFYHDEATG--TRQGRIGAASEAGTSSERASNVGAFAQFRVPVTDEWRMSFGGRVDNQWFHGTDGADHFNYGFSGNANTEYDAFEWLTAYAGAGTTFGGIPLGEAAIYDFSAIWTSGGVSPSRSYNFKTGLNAEYEGFTGSLGLFYNDIEDDHDLSSYRRSTAFDLVTRGFTLGAGYRYQDAFVKGNWSHTIVRMDGVPPSSGSAAYFGQLQGDLFSLEAGYEFTDYGGRTGATSEMALRNDEVEEL---PLPGYVVVNLYTEYTP 828
            AN F    G IT G+DFY DEATG   R  R G+ SE  T      ++GAF+Q R+ +TD+WR+SFGGR D QWF G  G D   +G SGNANTEYD  E L  Y GAGTTFGG+PLGE+AIY+FS  W   G +PSRSYN K G     + +T    LFYN I++ HDLSS  R++  DL TRG  L A Y Y   F +  +SHT V+ DG  P S  A+Y G + GD+F+ +AG+ F  YG R G  +E AL +D  EE     L  Y V NLY E+ P
Sbjct:  343 ANNFEVDNGVITAGIDFYRDEATGYHNRSPRNGSYSETST------DIGAFSQARLSLTDQWRVSFGGRADQQWFEGLTGEDFSEFGLSGNANTEYDLTEQLMVYGGAGTTFGGLPLGESAIYEFSGNWNYDGFAPSRSYNAKVGSRLALDDWTLDANLFYNLIDESHDLSSATRNSTVDLDTRGVNLSAMYSYGPGFARLTYSHTNVKTDGGVPLSTEASYQGVIMGDMFNFDAGHSFDSYGLRVGGNAEFALADDSPEERGNEKLDSYFVANLYAEWVP 617          
BLAST of mRNA_C-australica_Contig_9879.1.1 vs. uniprot
Match: A0A367WRW8_9PROT (TonB-dependent receptor n=2 Tax=Thalassospira xiamenensis TaxID=220697 RepID=A0A367WRW8_9PROT)

HSP 1 Score: 253 bits (647), Expect = 4.660e-76
Identity = 131/280 (46.79%), Postives = 172/280 (61.43%), Query Frame = 1
Query:    1 ANTFTNRLGTITTGLDFYHDEATGTRQGRIGAASEAGTSSERASNVGAFAQFRVPVTDEWRMSFGGRVDNQWFHGTDGADHFNYGFSGNANTEYDAFEWLTAYAGAGTTFGGIPLGEAAIYDFSAIWTSGGVSPSRSYNFKTGLNAEYEGFTGSLGLFYNDIEDDHDLSSYRRSTAFDLVTRGFTLGAGYRYQDAFVKGNWSHTIVRMDGVPPSSGSAAYFGQLQGDLFSLEAGYEFTDYGGRTGATSEMALRNDEVEE---LPLPGYVVVNLYTEYTPK 831
            ANTF   +G I+TG DFYHDEATG      G A  AG  +E  +N+G F+Q R+ ++D WR+SFGGR D QWF G DG D   +G SGNANTEYD  + L  Y G G++FGG+PLGE+AIY++++IW   G  PSRS+N+K G    ++ +     LFYN+I+D H L    R+T  DL TRGF L A + Y   FV+  +SHT V  D   P S  A+Y G + GD+ + E  + F D G + G TSE+AL  D  E+     L  Y V NLY E+TP+
Sbjct:  345 ANTFNIGMGNISTGFDFYHDEATGGAD-TAGPAGRAGRYTETTTNIGVFSQARLSLSDRWRVSFGGRGDQQWFEGIDGTDFSEFGLSGNANTEYDLTDDLMVYGGLGSSFGGLPLGESAIYNYTSIWNYDGFKPSRSHNYKAGARYSHDQWDFDGNLFYNEIDDSHSLEYGNRNTTSDLETRGFNLSATWTYGPGFVRAAYSHTDVEKDDKVPLSNDASYQGVVVGDIVNFEVAHRFDDLGLQVGTTSELALSEDAPEKNGYAKLDTYFVANLYGEWTPE 623          
BLAST of mRNA_C-australica_Contig_9879.1.1 vs. uniprot
Match: A0A367V2X4_9PROT (TonB-dependent receptor n=2 Tax=Thalassospira TaxID=168934 RepID=A0A367V2X4_9PROT)

HSP 1 Score: 253 bits (645), Expect = 8.810e-76
Identity = 134/279 (48.03%), Postives = 172/279 (61.65%), Query Frame = 1
Query:    1 ANTFTNRLGTITTGLDFYHDEATGTRQGRIGAASEAGTSSERASNVGAFAQFRVPVTDEWRMSFGGRVDNQWFHGTDGADHFNYGFSGNANTEYDAFEWLTAYAGAGTTFGGIPLGEAAIYDFSAIWTSGGVSPSRSYNFKTGLNAEYEGFTGSLGLFYNDIEDDHDLSSYRRSTAFDLVTRGFTLGAGYRYQDAFVKGNWSHTIVRMDGVPPSSGSAAYFGQLQGDLFSLEAGYEFTDYGGRTGATSEMALRNDEVEEL---PLPGYVVVNLYTEYTP 828
            AN F    G IT G+DFY DEATG        +   GT SE ++++GAF+Q R+ +TD WR+SFGGR D QWF    G D   +G SGNANTE+D  + +  Y GAGTTFGG+PLGE+AIY+FS  W   G +PSRSYN K G     + +T    LFYN I++ HDLSS  R++  DL TRG  L A Y Y   F +  +SHT V+ DG  P S  A+Y G + GD+F+ +AG+ F +YG R G +SE AL +D  E+     L  YVV NLY E+ P
Sbjct:  345 ANNFEVDDGVITAGIDFYRDEATGYHN----RSPRNGTYSETSTDIGAFSQARLSLTDRWRVSFGGRADQQWFDALTGEDFSEFGLSGNANTEFDVTDQVMVYGGAGTTFGGLPLGESAIYNFSDNWDYTGFAPSRSYNTKIGSRVVLDDWTLDGNLFYNLIDESHDLSSATRNSTVDLDTRGVNLSAQYNYGPGFARLTYSHTTVKTDGGVPLSTEASYQGVIMGDIFNFDAGHSFDEYGLRVGGSSEFALSDDRPEDSGNEKLDSYVVANLYAEWVP 619          
The following BLAST results are available for this feature:
BLAST of mRNA_C-australica_Contig_9879.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2E9W8I6_9PROT7.080e-13768.31TonB-dependent receptor n=2 Tax=Alphaproteobacteri... [more]
A0A2N3KXC6_9PROT2.060e-8348.93TonB-dependent receptor n=2 Tax=Thalassospira mari... [more]
A0A154L625_9PROT3.220e-8350.00TonB-dependent receptor n=6 Tax=Thalassospira TaxI... [more]
A0A1Y2LB68_9PROT6.100e-8349.15TonB-dependent receptor n=1 Tax=Thalassospira alka... [more]
A0A1Y2KXW1_9PROT2.230e-8247.14TonB-dependent receptor n=2 Tax=Thalassospira TaxI... [more]
A0A199Y3H6_9PROT2.390e-8049.10TonB-dependent receptor n=1 Tax=Thalassospira prof... [more]
UPI00051A3A751.000e-7848.39TonB-dependent receptor n=1 Tax=Thalassospira aust... [more]
A0A154VF21_9PROT1.030e-7749.47TonB-dependent receptor n=5 Tax=Thalassospira TaxI... [more]
A0A367WRW8_9PROT4.660e-7646.79TonB-dependent receptor n=2 Tax=Thalassospira xiam... [more]
A0A367V2X4_9PROT8.810e-7648.03TonB-dependent receptor n=2 Tax=Thalassospira TaxI... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-australica_Contig_9879contigC-australica_Contig_9879:1..852 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Chrysoparadoxa australica CS_1217 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog1528106.JRJE01000004_gene474
PFAMsPlug,TonB_dep_Rec
Model size852
Max annot lvl204441|Rhodospirillales
KEGG koko:K16087
KEGG TC1.B.14.2
Hectar predicted targeting categoryother localisation
Exons1
Evalue1.2e-79
EggNOG OGsCOG1629@1|root,COG4771@2|Bacteria,1MX42@1224|Proteobacteria,2TR9M@28211|Alphaproteobacteria,2JQ1Q@204441|Rhodospirillales
DescriptionCOG1629 Outer membrane receptor proteins, mostly Fe transport
Cds size852
COG categoryP
BRITEko00000,ko02000
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1682588854.151086-CDS-C-australica_Contig_9879:0..8521682588854.151086-CDS-C-australica_Contig_9879:0..852Chrysoparadoxa australica CS_1217CDSC-australica_Contig_9879 1..852 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_C-australica_Contig_9879.1.1prot_C-australica_Contig_9879.1.1Chrysoparadoxa australica CS_1217polypeptideC-australica_Contig_9879 1..852 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_C-australica_Contig_9879.1.1

>prot_C-australica_Contig_9879.1.1 ID=prot_C-australica_Contig_9879.1.1|Name=mRNA_C-australica_Contig_9879.1.1|organism=Chrysoparadoxa australica CS_1217|type=polypeptide|length=284bp
ANTFTNRLGTITTGLDFYHDEATGTRQGRIGAASEAGTSSERASNVGAFA
QFRVPVTDEWRMSFGGRVDNQWFHGTDGADHFNYGFSGNANTEYDAFEWL
TAYAGAGTTFGGIPLGEAAIYDFSAIWTSGGVSPSRSYNFKTGLNAEYEG
FTGSLGLFYNDIEDDHDLSSYRRSTAFDLVTRGFTLGAGYRYQDAFVKGN
WSHTIVRMDGVPPSSGSAAYFGQLQGDLFSLEAGYEFTDYGGRTGATSEM
ALRNDEVEELPLPGYVVVNLYTEYTPKQAEFLTL
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mRNA from alignment at C-australica_Contig_9879:1..852+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_C-australica_Contig_9879.1.1 ID=mRNA_C-australica_Contig_9879.1.1|Name=mRNA_C-australica_Contig_9879.1.1|organism=Chrysoparadoxa australica CS_1217|type=mRNA|length=852bp|location=Sequence derived from alignment at C-australica_Contig_9879:1..852+ (Chrysoparadoxa australica CS_1217)
GCCAACACCTTCACCAACCGGCTTGGTACGATCACCACAGGCCTGGATTT CTACCATGACGAGGCGACCGGCACCCGGCAGGGCCGGATCGGTGCAGCCA GCGAAGCCGGCACCAGTTCGGAGCGGGCAAGCAATGTCGGTGCATTTGCG CAGTTCCGTGTGCCGGTTACGGATGAGTGGCGTATGTCCTTTGGTGGCCG TGTCGATAACCAGTGGTTCCATGGAACCGATGGCGCCGACCACTTCAATT ACGGTTTCTCCGGCAACGCCAATACCGAATATGACGCCTTTGAATGGCTG ACGGCCTATGCCGGCGCCGGGACCACCTTCGGTGGCATTCCTCTCGGTGA AGCGGCGATCTATGATTTTTCGGCGATCTGGACGTCAGGTGGTGTCAGTC CCTCCCGCTCCTACAACTTCAAGACCGGCCTGAATGCCGAGTATGAGGGT TTCACCGGAAGTCTCGGTCTGTTCTACAACGATATCGAGGATGACCACGA TCTTTCCAGCTATCGCCGGTCGACCGCTTTCGACCTCGTGACCCGCGGCT TCACCCTGGGTGCCGGATACCGCTACCAGGATGCGTTTGTTAAGGGGAAC TGGTCGCACACCATCGTGCGGATGGACGGTGTTCCCCCTTCATCCGGGAG TGCCGCATATTTCGGTCAGTTGCAGGGTGACCTGTTCTCCCTCGAGGCCG GTTACGAGTTCACCGATTACGGCGGTCGTACCGGTGCGACGAGTGAAATG GCACTTCGCAATGACGAGGTCGAGGAGCTTCCGCTGCCGGGCTATGTCGT GGTCAACCTCTACACGGAATACACGCCGAAGCAGGCCGAGTTCCTGACGC TC
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Coding sequence (CDS) from alignment at C-australica_Contig_9879:1..852+

>mRNA_C-australica_Contig_9879.1.1 ID=mRNA_C-australica_Contig_9879.1.1|Name=mRNA_C-australica_Contig_9879.1.1|organism=Chrysoparadoxa australica CS_1217|type=CDS|length=852bp|location=Sequence derived from alignment at C-australica_Contig_9879:1..852+ (Chrysoparadoxa australica CS_1217)
GCCAACACCTTCACCAACCGGCTTGGTACGATCACCACAGGCCTGGATTT
CTACCATGACGAGGCGACCGGCACCCGGCAGGGCCGGATCGGTGCAGCCA
GCGAAGCCGGCACCAGTTCGGAGCGGGCAAGCAATGTCGGTGCATTTGCG
CAGTTCCGTGTGCCGGTTACGGATGAGTGGCGTATGTCCTTTGGTGGCCG
TGTCGATAACCAGTGGTTCCATGGAACCGATGGCGCCGACCACTTCAATT
ACGGTTTCTCCGGCAACGCCAATACCGAATATGACGCCTTTGAATGGCTG
ACGGCCTATGCCGGCGCCGGGACCACCTTCGGTGGCATTCCTCTCGGTGA
AGCGGCGATCTATGATTTTTCGGCGATCTGGACGTCAGGTGGTGTCAGTC
CCTCCCGCTCCTACAACTTCAAGACCGGCCTGAATGCCGAGTATGAGGGT
TTCACCGGAAGTCTCGGTCTGTTCTACAACGATATCGAGGATGACCACGA
TCTTTCCAGCTATCGCCGGTCGACCGCTTTCGACCTCGTGACCCGCGGCT
TCACCCTGGGTGCCGGATACCGCTACCAGGATGCGTTTGTTAAGGGGAAC
TGGTCGCACACCATCGTGCGGATGGACGGTGTTCCCCCTTCATCCGGGAG
TGCCGCATATTTCGGTCAGTTGCAGGGTGACCTGTTCTCCCTCGAGGCCG
GTTACGAGTTCACCGATTACGGCGGTCGTACCGGTGCGACGAGTGAAATG
GCACTTCGCAATGACGAGGTCGAGGAGCTTCCGCTGCCGGGCTATGTCGT
GGTCAACCTCTACACGGAATACACGCCGAAGCAGGCCGAGTTCCTGACGC
TC
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