mRNA_C-australica_Contig_9872.1.1 (mRNA) Chrysoparadoxa australica CS_1217

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_C-australica_Contig_9872.1.1
Unique NamemRNA_C-australica_Contig_9872.1.1
TypemRNA
OrganismChrysoparadoxa australica CS_1217 (Chrysoparadoxa australica CS_1217)
Homology
BLAST of mRNA_C-australica_Contig_9872.1.1 vs. uniprot
Match: A0A2T8HQD4_9RHOB (Betaine-aldehyde dehydrogenase n=3 Tax=Rhodobacterales TaxID=204455 RepID=A0A2T8HQD4_9RHOB)

HSP 1 Score: 479 bits (1233), Expect = 8.100e-167
Identity = 243/249 (97.59%), Postives = 247/249 (99.20%), Query Frame = 1
Query:    1 EVGKSILGAARGNLKRVSLELGGKSPVVVFADADLEKAIPGAAMATFLLQGQNCMAGTRLFIEKPIYESMMAGIEQVAKGLIIGDPFAMDTMVGPLISKAQQDRVASYVVSGVEQGAELVTGGNRQSPGHFFEPTLFSNTSADMRIVQEEIFGPVISAQVFDDASDLKALARRVNDTQYGLSGSVWTKDLSKAHGMAHLIRAGQVAINCHGAVDINVPFGGMKQSGWGREYGEAALDGYLETKAITAVF 747
            EVGKSILGAARGNLKRVSLELGGKSPVVVFADADLE+AIPGAAMATFLLQGQNCMAGTRLFIEKPIYE+MMAGIEQVAKGL +GDPFAMDTMVGPLISKAQQDRVASYVVSGVEQGAELVTGGNRQ PGHFFEPTLFSNTSADMRIVQEEIFGPVISAQVFDDASDLKALARRVNDTQYGLSGSVWTKDLSKAHGMAHLIR+GQVAINCHGAVDINVPFGGMKQSGWGREYGEAALDGYLETKAITAVF
Sbjct:  254 EVGKSILGAARGNLKRVSLELGGKSPVVVFADADLEQAIPGAAMATFLLQGQNCMAGTRLFIEKPIYETMMAGIEQVAKGLKLGDPFAMDTMVGPLISKAQQDRVASYVVSGVEQGAELVTGGNRQGPGHFFEPTLFSNTSADMRIVQEEIFGPVISAQVFDDASDLKALARRVNDTQYGLSGSVWTKDLSKAHGMAHLIRSGQVAINCHGAVDINVPFGGMKQSGWGREYGEAALDGYLETKAITAVF 502          
BLAST of mRNA_C-australica_Contig_9872.1.1 vs. uniprot
Match: A0A7C7SLW6_9GAMM (Aldehyde dehydrogenase family protein n=3 Tax=root TaxID=1 RepID=A0A7C7SLW6_9GAMM)

HSP 1 Score: 296 bits (759), Expect = 4.130e-95
Identity = 148/250 (59.20%), Postives = 189/250 (75.60%), Query Frame = 1
Query:    1 EVGKSILGAARGNLKRVSLELGGKSPVVVFADADLEKAIPGAAMATFLLQGQNCMAGTRLFIEKPIYESMMAGIEQVAKGLIIGDPFAMDTMVGPLISKAQQDRVASYVVSGVEQGAELVTGGNR-QSPGHFFEPTLFSNTSADMRIVQEEIFGPVISAQVFDDASDLKALARRVNDTQYGLSGSVWTKDLSKAHGMAHLIRAGQVAINCHGAVDINVPFGGMKQSGWGREYGEAALDGYLETKAITAVF 747
            EVGK I+ A+ GNLK+V+LELGGK+PVVVF DADLEK IPGAA A F LQGQNCMAGTRLF+ + IYE+++ G++++A+   IG         GPLIS+ Q++RV  Y+  G E+GA+L+TGG      GHF +PT+F+N   DMRI +EEIFGPV+ A+ F D  D +++A+R NDT YGLSGSVW++D+S AH MA LI AGQV+INCH AVD  +PFGG KQSGWGRE+G+  LD YL+TKA T +F
Sbjct:  253 EVGKKIVEASIGNLKKVTLELGGKNPVVVFPDADLEKVIPGAARACFFLQGQNCMAGTRLFVHEHIYEAVINGVKEMAEAFTIGHGLIPANDFGPLISEVQKNRVLDYIQIGKEEGADLITGGESIGEKGHFVQPTIFANVRGDMRIAKEEIFGPVLCAESFGD-DDFESIAKRANDTNYGLSGSVWSQDISTAHKMAMLIDAGQVSINCHAAVDPAIPFGGNKQSGWGREFGQEGLDPYLKTKATTVIF 501          
BLAST of mRNA_C-australica_Contig_9872.1.1 vs. uniprot
Match: A0A381RAD9_9ZZZZ (Aldedh domain-containing protein n=1 Tax=marine metagenome TaxID=408172 RepID=A0A381RAD9_9ZZZZ)

HSP 1 Score: 293 bits (749), Expect = 1.600e-93
Identity = 149/250 (59.60%), Postives = 189/250 (75.60%), Query Frame = 1
Query:    1 EVGKSILGAARGNLKRVSLELGGKSPVVVFADADLEKAIPGAAMATFLLQGQNCMAGTRLFIEKPIYESMMAGIEQVAKGLIIGDPFAMDTMVGPLISKAQQDRVASYVVSGVEQGAELVTGGNR-QSPGHFFEPTLFSNTSADMRIVQEEIFGPVISAQVFDDASDLKALARRVNDTQYGLSGSVWTKDLSKAHGMAHLIRAGQVAINCHGAVDINVPFGGMKQSGWGREYGEAALDGYLETKAITAVF 747
            EVGK I+ A+ GNLK+V+LELGGK+PVVVF DADLEKAIPGAA A F LQGQNCMAGTRLF+ + IY+ ++ G++++A+   IG         GPLIS+ Q++RV SY+  G ++GAELVTGG      G F +PT+FSN   DM+I +EEIFGPV+ AQ F++  DL+ +A + NDT YGLSGSVWT+D+S AH MA LI AGQV+INCH AVD  +PFGG KQSGWGRE+G+  L+ YL+TKA + VF
Sbjct:  260 EVGKKIVEASVGNLKKVTLELGGKNPVVVFPDADLEKAIPGAARACFFLQGQNCMAGTRLFVHQDIYQPVIDGVKEMAEAFTIGHGLIPTNDFGPLISETQRERVMSYIQLGQDEGAELVTGGETIGDKGFFVKPTIFSNVKGDMKIAKEEIFGPVLCAQPFEN-EDLETIAHQANDTSYGLSGSVWTQDISIAHKMAMLIDAGQVSINCHAAVDPAIPFGGNKQSGWGREFGKEGLEPYLKTKATSVVF 508          
BLAST of mRNA_C-australica_Contig_9872.1.1 vs. uniprot
Match: A0A7C7IG97_9GAMM (Aldehyde dehydrogenase family protein n=3 Tax=root TaxID=1 RepID=A0A7C7IG97_9GAMM)

HSP 1 Score: 290 bits (743), Expect = 1.050e-92
Identity = 147/250 (58.80%), Postives = 191/250 (76.40%), Query Frame = 1
Query:    1 EVGKSILGAARGNLKRVSLELGGKSPVVVFADADLEKAIPGAAMATFLLQGQNCMAGTRLFIEKPIYESMMAGIEQVAKGLIIGDPFAMDTMVGPLISKAQQDRVASYVVSGVEQGAELVTGGNRQSP-GHFFEPTLFSNTSADMRIVQEEIFGPVISAQVFDDASDLKALARRVNDTQYGLSGSVWTKDLSKAHGMAHLIRAGQVAINCHGAVDINVPFGGMKQSGWGREYGEAALDGYLETKAITAVF 747
            EVGK I+ A+ GNLKRV+LELGGK+PVVVF DADL+K IPGAA A F LQGQNCMAGTRLF+ K I++ ++AGI+++A+   IG     +   GPLIS  Q+ RV SY+ SG+++GAEL+TGG      G F +PT+F+    DM+I +EEIFGPV+ AQ FD+ +DL+A+A++ NDT YGLSGSVWT+++S AH MA LI AGQV+IN H AVD  +PFGG KQSGWGRE+G+  L+ YL+TKA + +F
Sbjct:  253 EVGKKIVAASVGNLKRVTLELGGKNPVVVFPDADLDKVIPGAARACFFLQGQNCMAGTRLFVHKDIFDPVVAGIKEMAESFKIGHGLDPEKDFGPLISDTQRKRVMSYIQSGIDEGAELITGGEMVGDKGFFVKPTIFTQIHGDMKIAKEEIFGPVLCAQSFDN-NDLEAIAQQANDTSYGLSGSVWTQNISVAHKMAMLINAGQVSINWHAAVDPAIPFGGNKQSGWGREFGKEGLEPYLKTKATSVIF 501          
BLAST of mRNA_C-australica_Contig_9872.1.1 vs. uniprot
Match: A0A2E0EY12_9GAMM (Betaine-aldehyde dehydrogenase n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A2E0EY12_9GAMM)

HSP 1 Score: 289 bits (739), Expect = 4.200e-92
Identity = 146/250 (58.40%), Postives = 187/250 (74.80%), Query Frame = 1
Query:    1 EVGKSILGAARGNLKRVSLELGGKSPVVVFADADLEKAIPGAAMATFLLQGQNCMAGTRLFIEKPIYESMMAGIEQVAKGLIIGDPFAMDTMVGPLISKAQQDRVASYVVSGVEQGAELVTGGNRQSP-GHFFEPTLFSNTSADMRIVQEEIFGPVISAQVFDDASDLKALARRVNDTQYGLSGSVWTKDLSKAHGMAHLIRAGQVAINCHGAVDINVPFGGMKQSGWGREYGEAALDGYLETKAITAVF 747
            EVGK I+ A+ GNLK+V+LELGGKSPVVVF DADLEK IPGAA A F LQG NCMAGTRLF+ K IYE ++AG++++A+   IG         GPLIS  Q++RV  Y+  G ++GA+L++GG      G+F +PT+FSN + DMRI +EEIFGPV+ A+ FDD SDL+ +A + N+T YGLSGSVWT+D+S AH MA LI +GQV+IN   AVD  +PFGG KQSGWGRE+G+  L+ YL+TKA T +F
Sbjct:  253 EVGKKIVEASIGNLKKVTLELGGKSPVVVFPDADLEKVIPGAARACFFLQGXNCMAGTRLFVHKDIYEPVLAGVKEMAEAFTIGHGLIPTNDFGPLISATQKERVMEYIQIGKDEGADLISGGESVGDKGYFVQPTIFSNVNGDMRIAREEIFGPVLCAESFDD-SDLETIANKANNTSYGLSGSVWTQDISVAHKMAMLIDSGQVSINXXAAVDPAIPFGGNKQSGWGREFGQEGLEPYLKTKATTVIF 501          
BLAST of mRNA_C-australica_Contig_9872.1.1 vs. uniprot
Match: A0A5C8ZU13_9GAMM (Aldehyde dehydrogenase family protein n=1 Tax=Parahaliea maris TaxID=2716870 RepID=A0A5C8ZU13_9GAMM)

HSP 1 Score: 288 bits (736), Expect = 1.520e-91
Identity = 141/245 (57.55%), Postives = 182/245 (74.29%), Query Frame = 1
Query:    7 GKSILGAARGNLKRVSLELGGKSPVVVFADADLEKAIPGAAMATFLLQGQNCMAGTRLFIEKPIYESMMAGIEQVAKGLIIGDPFAMDTMVGPLISKAQQDRVASYVVSGVEQGAELVTGGNR-QSPGHFFEPTLFSNTSADMRIVQEEIFGPVISAQVFDDASDLKALARRVNDTQYGLSGSVWTKDLSKAHGMAHLIRAGQVAINCHGAVDINVPFGGMKQSGWGREYGEAALDGYLETKAIT 738
            G+ ++ AA GNLK+VSLELGGKSPVVV  DAD   A+PG AMATF LQGQNCMAGTR+FI   IY++++ G++  A  ++IG      T+VGPLIS A +D+V  Y+  G+ +GA L+TGG   + PG+F +PT+F + + DM IV+EEIFGPV+S Q F   +DL A+A   NDT+YGLSGSVWT++LS AH +   IRAG V++NCHGAV  N+PFGG  QSGWGRE+G+  LD YLETKA+T
Sbjct:  264 GRKVIQAATGNLKKVSLELGGKSPVVVMPDADPALAVPGVAMATFFLQGQNCMAGTRIFIHDSIYDALVEGLKAFADSMVIGHGLDPTTLVGPLISAAHRDKVMGYIERGIAEGATLITGGKALEGPGNFVQPTIFGDCTPDMAIVREEIFGPVMSIQRFA-TTDLDAIAAMANDTEYGLSGSVWTRNLSTAHALVSRIRAGHVSVNCHGAVGTNIPFGGYGQSGWGREFGQEGLDAYLETKAVT 507          
BLAST of mRNA_C-australica_Contig_9872.1.1 vs. uniprot
Match: A0A1E8FBP5_9ALTE (Aldehyde dehydrogenase n=1 Tax=Alteromonas lipolytica TaxID=1856405 RepID=A0A1E8FBP5_9ALTE)

HSP 1 Score: 287 bits (734), Expect = 2.790e-91
Identity = 141/246 (57.32%), Postives = 182/246 (73.98%), Query Frame = 1
Query:    7 GKSILGAARGNLKRVSLELGGKSPVVVFADADLEKAIPGAAMATFLLQGQNCMAGTRLFIEKPIYESMMAGIEQVAKGLIIGDPFAMDTMVGPLISKAQQDRVASYVVSGVEQGAELVTGGNRQS-PGHFFEPTLFSNTSADMRIVQEEIFGPVISAQVFDDASDLKALARRVNDTQYGLSGSVWTKDLSKAHGMAHLIRAGQVAINCHGAVDINVPFGGMKQSGWGREYGEAALDGYLETKAITA 741
            G+ ++ AA GNLK+VSLELGGKSPVV+  DADL   +PG AMATF LQGQNCMAGTR+FI + I++  +  I   A+  +IG     +T +GPLISKA +D+V  Y+  G+E+GA LV GGN  +  G+F EPT+F+N + DM IV+EEIFGPV++ Q F+  +DL  +A   N+T+YGLSGSVWT +LS AH +   IRAGQV+INCHGA+  N+PFGG  QSGWGRE+G+  LD YLETKA+TA
Sbjct:  261 GRKVIAAAMGNLKKVSLELGGKSPVVIMPDADLSLVVPGVAMATFFLQGQNCMAGTRIFIHESIHDECIEQIAAFARQFVIGHGLKPETFIGPLISKAHRDKVYGYIQKGIEEGATLVCGGNMLAGEGNFIEPTIFTNCTPDMAIVKEEIFGPVMAVQRFN-TTDLDEIAAMANNTEYGLSGSVWTTNLSTAHSLVARIRAGQVSINCHGAIGTNIPFGGYGQSGWGREFGQEGLDAYLETKAVTA 505          
BLAST of mRNA_C-australica_Contig_9872.1.1 vs. uniprot
Match: A0A502FJ73_9SPHN (Aldehyde dehydrogenase family protein n=1 Tax=Sphingomonas glacialis TaxID=658225 RepID=A0A502FJ73_9SPHN)

HSP 1 Score: 286 bits (732), Expect = 5.580e-91
Identity = 140/245 (57.14%), Postives = 187/245 (76.33%), Query Frame = 1
Query:    7 GKSILGAARGNLKRVSLELGGKSPVVVFADADLEKAIPGAAMATFLLQGQNCMAGTRLFIEKPIYESMMAGIEQVAKGLIIGDPFAMDTMVGPLISKAQQDRVASYVVSGVEQGAELVTGGNR-QSPGHFFEPTLFSNTSADMRIVQEEIFGPVISAQVFDDASDLKALARRVNDTQYGLSGSVWTKDLSKAHGMAHLIRAGQVAINCHGAVDINVPFGGMKQSGWGREYGEAALDGYLETKAIT 738
            GK I+ AA GNLK+V+LELGGKSPVVV  DADL  AIPG AMAT+ LQGQNCMAGTR+F+   I+++++ G+ Q ++G+ +G      +M GPLIS+ Q D+V  ++   V +GA LV GG R + PG+F EPT+F+NT+ DMR+V+EEIFGPV++ Q F+  +DL A+A+  NDT +GLSGSVWT++L  AH +   IRAG V++NCHGAV  N+PFGG  QSGWGRE+G+ +L+GYLETKA+T
Sbjct:  261 GKRIIQAATGNLKKVTLELGGKSPVVVMPDADLALAIPGVAMATYFLQGQNCMAGTRIFVHVDIHDALVEGLVQFSQGMTLGHGLDPTSMQGPLISQVQTDKVMGFIEGAVAEGATLVAGGKRLERPGNFVEPTIFTNTTRDMRVVREEIFGPVMAIQRFE-GTDLDAIAKLANDTPFGLSGSVWTQNLGWAHKLVARIRAGHVSVNCHGAVGTNIPFGGYGQSGWGREFGQESLEGYLETKAVT 504          
BLAST of mRNA_C-australica_Contig_9872.1.1 vs. uniprot
Match: A0A2N3D9J1_9PROT (Aldehyde dehydrogenase n=1 Tax=Alphaproteobacteria bacterium HGW-Alphaproteobacteria-16 TaxID=2013662 RepID=A0A2N3D9J1_9PROT)

HSP 1 Score: 285 bits (729), Expect = 1.300e-90
Identity = 145/247 (58.70%), Postives = 185/247 (74.90%), Query Frame = 1
Query:    1 EVGKSILGAARGNLKRVSLELGGKSPVVVFADADLEKAIPGAAMATFLLQGQNCMAGTRLFIEKPIYESMMAGIEQVAKGLIIGDPFAMDTMVGPLISKAQQDRVASYVVSGVEQGAELVTGGNR-QSPGHFFEPTLFSNTSADMRIVQEEIFGPVISAQVFDDASDLKALARRVNDTQYGLSGSVWTKDLSKAHGMAHLIRAGQVAINCHGAVDINVPFGGMKQSGWGREYGEAALDGYLETKAIT 738
            EVGK I+ +A   LK++SLELGGKSPVVVF DAD+E+AIPG AMATF LQGQNCMAGTR+F+   I++  +AG+     G+ +G      T VGPLIS  Q+ RV +++  G  +GA LV GG R + PGHF  PT+F++T+  MR+V+EEIFGPV++ Q F  A+DL ++AR+ ND+ YGLSGSVWT+DLS AH MA  IR+G V+INCHGAV  N+PFGG KQSGWGRE+G   +D YLETKA+T
Sbjct:  252 EVGKIIIRSAAETLKKLSLELGGKSPVVVFDDADMEQAIPGVAMATFFLQGQNCMAGTRIFVHDRIHDRFVAGLADFVAGMQLGHGLNPATQVGPLISAKQRARVEAFIDEGPGEGATLVAGGKRHEGPGHFVVPTIFTDTTPQMRMVREEIFGPVMAIQRFA-ANDLDSVARQANDSVYGLSGSVWTRDLSTAHKMAARIRSGHVSINCHGAVGSNIPFGGFKQSGWGREFGREGMDLYLETKAVT 497          
BLAST of mRNA_C-australica_Contig_9872.1.1 vs. uniprot
Match: UPI001BCDCD1C (aldehyde dehydrogenase family protein n=1 Tax=Croceicoccus gelatinilyticus TaxID=2835536 RepID=UPI001BCDCD1C)

HSP 1 Score: 284 bits (727), Expect = 2.320e-90
Identity = 144/247 (58.30%), Postives = 174/247 (70.45%), Query Frame = 1
Query:    1 EVGKSILGAARGNLKRVSLELGGKSPVVVFADADLEKAIPGAAMATFLLQGQNCMAGTRLFIEKPIYESMMAGIEQVAKGLIIGDPFAMDTMVGPLISKAQQDRVASYVVSGVEQGAELVTGGNR-QSPGHFFEPTLFSNTSADMRIVQEEIFGPVISAQVFDDASDLKALARRVNDTQYGLSGSVWTKDLSKAHGMAHLIRAGQVAINCHGAVDINVPFGGMKQSGWGREYGEAALDGYLETKAIT 738
            EVGK I      +LK+VSLELGGKSPVVVF D DL KAIPG AMATF LQGQNCMAGTR+F+ + IYE ++AG+ +    + +G      TM+GPL+S  QQ RV  YV  G   GA L+ GG   Q PG+F  PT+F++    MRIV+EEIFGPV++ Q FD   DL  +A   ND+ YGLSGSVWT+DLS AH M   IR+G V+INCHGAV  N+PFGG KQSGWGRE+G   +D YLETKA+T
Sbjct:  248 EVGKMIARECTDSLKKVSLELGGKSPVVVFPDVDLAKAIPGVAMATFFLQGQNCMAGTRIFVHRDIYEPLLAGLAEFTANMQMGHGLEAGTMLGPLVSAKQQQRVMEYVEDGKSCGARLIVGGEAWQGPGNFVRPTIFADVDPSMRIVREEIFGPVMAVQPFD-TDDLDEIAAMANDSPYGLSGSVWTRDLSNAHRMVSRIRSGHVSINCHGAVASNIPFGGYKQSGWGREFGREGMDLYLETKAVT 493          
The following BLAST results are available for this feature:
BLAST of mRNA_C-australica_Contig_9872.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2T8HQD4_9RHOB8.100e-16797.59Betaine-aldehyde dehydrogenase n=3 Tax=Rhodobacter... [more]
A0A7C7SLW6_9GAMM4.130e-9559.20Aldehyde dehydrogenase family protein n=3 Tax=root... [more]
A0A381RAD9_9ZZZZ1.600e-9359.60Aldedh domain-containing protein n=1 Tax=marine me... [more]
A0A7C7IG97_9GAMM1.050e-9258.80Aldehyde dehydrogenase family protein n=3 Tax=root... [more]
A0A2E0EY12_9GAMM4.200e-9258.40Betaine-aldehyde dehydrogenase n=1 Tax=Gammaproteo... [more]
A0A5C8ZU13_9GAMM1.520e-9157.55Aldehyde dehydrogenase family protein n=1 Tax=Para... [more]
A0A1E8FBP5_9ALTE2.790e-9157.32Aldehyde dehydrogenase n=1 Tax=Alteromonas lipolyt... [more]
A0A502FJ73_9SPHN5.580e-9157.14Aldehyde dehydrogenase family protein n=1 Tax=Sphi... [more]
A0A2N3D9J1_9PROT1.300e-9058.70Aldehyde dehydrogenase n=1 Tax=Alphaproteobacteria... [more]
UPI001BCDCD1C2.320e-9058.30aldehyde dehydrogenase family protein n=1 Tax=Croc... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-australica_Contig_9872contigC-australica_Contig_9872:2..751 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Chrysoparadoxa australica CS_1217 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start0
Seed ortholog158500.BV97_04563
PFAMsAldedh
Model size750
Max annot lvl204457|Sphingomonadales
KEGG rclassRC00080
KEGG koko:K00146
KEGG ReactionR02536
KEGG Pathwayko00360,ko00643,ko01100,ko01120,map00360,map00643,map01100,map01120
Hectar predicted targeting categoryother localisation
Exons1
Evalue1.17e-88
EggNOG OGsCOG1012@1|root,COG1012@2|Bacteria,1MU1V@1224|Proteobacteria,2TQR1@28211|Alphaproteobacteria,2JZVD@204457|Sphingomonadales
EC1.2.1.39
Descriptionbelongs to the aldehyde dehydrogenase family
Cds size750
COG categoryC
BRITEko00000,ko00001,ko01000
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1682588854.077382-CDS-C-australica_Contig_9872:1..7511682588854.077382-CDS-C-australica_Contig_9872:1..751Chrysoparadoxa australica CS_1217CDSC-australica_Contig_9872 2..751 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_C-australica_Contig_9872.1.1prot_C-australica_Contig_9872.1.1Chrysoparadoxa australica CS_1217polypeptideC-australica_Contig_9872 2..751 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_C-australica_Contig_9872.1.1

>prot_C-australica_Contig_9872.1.1 ID=prot_C-australica_Contig_9872.1.1|Name=mRNA_C-australica_Contig_9872.1.1|organism=Chrysoparadoxa australica CS_1217|type=polypeptide|length=250bp
EVGKSILGAARGNLKRVSLELGGKSPVVVFADADLEKAIPGAAMATFLLQ
GQNCMAGTRLFIEKPIYESMMAGIEQVAKGLIIGDPFAMDTMVGPLISKA
QQDRVASYVVSGVEQGAELVTGGNRQSPGHFFEPTLFSNTSADMRIVQEE
IFGPVISAQVFDDASDLKALARRVNDTQYGLSGSVWTKDLSKAHGMAHLI
RAGQVAINCHGAVDINVPFGGMKQSGWGREYGEAALDGYLETKAITAVF*
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mRNA from alignment at C-australica_Contig_9872:2..751+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_C-australica_Contig_9872.1.1 ID=mRNA_C-australica_Contig_9872.1.1|Name=mRNA_C-australica_Contig_9872.1.1|organism=Chrysoparadoxa australica CS_1217|type=mRNA|length=750bp|location=Sequence derived from alignment at C-australica_Contig_9872:2..751+ (Chrysoparadoxa australica CS_1217)
GAAGTTGGAAAGTCGATCCTTGGCGCCGCGCGCGGCAACCTAAAACGCGT CTCCTTGGAGCTGGGCGGCAAGTCACCAGTCGTCGTCTTCGCTGATGCCG ATCTTGAAAAGGCGATCCCCGGCGCGGCCATGGCAACCTTCTTATTGCAA GGCCAGAATTGCATGGCCGGCACACGGCTATTCATTGAAAAGCCGATCTA CGAATCCATGATGGCGGGGATCGAGCAGGTCGCGAAGGGCTTGATAATCG GGGATCCCTTCGCGATGGATACCATGGTTGGCCCGCTCATTTCGAAAGCG CAACAGGATCGCGTCGCAAGTTATGTCGTGAGTGGTGTAGAACAGGGCGC TGAACTTGTAACCGGTGGCAACAGACAGAGCCCTGGGCATTTCTTTGAGC CGACACTTTTCTCGAACACCAGCGCCGATATGCGGATCGTGCAAGAGGAA ATATTCGGCCCAGTGATCTCGGCGCAGGTCTTCGACGACGCTTCCGACCT GAAAGCGCTGGCGCGTCGGGTGAACGACACGCAGTACGGCTTATCGGGCA GCGTCTGGACCAAGGATTTGTCGAAGGCTCACGGTATGGCACATCTCATC CGGGCAGGTCAGGTAGCGATCAACTGCCACGGGGCGGTCGACATCAACGT GCCCTTCGGTGGGATGAAGCAATCAGGCTGGGGCCGCGAATACGGCGAAG CAGCGCTGGACGGTTACCTCGAAACCAAGGCGATCACTGCAGTGTTCTAA
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Coding sequence (CDS) from alignment at C-australica_Contig_9872:2..751+

>mRNA_C-australica_Contig_9872.1.1 ID=mRNA_C-australica_Contig_9872.1.1|Name=mRNA_C-australica_Contig_9872.1.1|organism=Chrysoparadoxa australica CS_1217|type=CDS|length=750bp|location=Sequence derived from alignment at C-australica_Contig_9872:2..751+ (Chrysoparadoxa australica CS_1217)
GAAGTTGGAAAGTCGATCCTTGGCGCCGCGCGCGGCAACCTAAAACGCGT
CTCCTTGGAGCTGGGCGGCAAGTCACCAGTCGTCGTCTTCGCTGATGCCG
ATCTTGAAAAGGCGATCCCCGGCGCGGCCATGGCAACCTTCTTATTGCAA
GGCCAGAATTGCATGGCCGGCACACGGCTATTCATTGAAAAGCCGATCTA
CGAATCCATGATGGCGGGGATCGAGCAGGTCGCGAAGGGCTTGATAATCG
GGGATCCCTTCGCGATGGATACCATGGTTGGCCCGCTCATTTCGAAAGCG
CAACAGGATCGCGTCGCAAGTTATGTCGTGAGTGGTGTAGAACAGGGCGC
TGAACTTGTAACCGGTGGCAACAGACAGAGCCCTGGGCATTTCTTTGAGC
CGACACTTTTCTCGAACACCAGCGCCGATATGCGGATCGTGCAAGAGGAA
ATATTCGGCCCAGTGATCTCGGCGCAGGTCTTCGACGACGCTTCCGACCT
GAAAGCGCTGGCGCGTCGGGTGAACGACACGCAGTACGGCTTATCGGGCA
GCGTCTGGACCAAGGATTTGTCGAAGGCTCACGGTATGGCACATCTCATC
CGGGCAGGTCAGGTAGCGATCAACTGCCACGGGGCGGTCGACATCAACGT
GCCCTTCGGTGGGATGAAGCAATCAGGCTGGGGCCGCGAATACGGCGAAG
CAGCGCTGGACGGTTACCTCGAAACCAAGGCGATCACTGCAGTGTTCTAA
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