mRNA_C-australica_Contig_9862.1.1 (mRNA) Chrysoparadoxa australica CS_1217

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_C-australica_Contig_9862.1.1
Unique NamemRNA_C-australica_Contig_9862.1.1
TypemRNA
OrganismChrysoparadoxa australica CS_1217 (Chrysoparadoxa australica CS_1217)
Homology
BLAST of mRNA_C-australica_Contig_9862.1.1 vs. uniprot
Match: A0A2D7WH64_9GAMM (Glutamine--tRNA ligase n=3 Tax=Spongiibacter TaxID=630749 RepID=A0A2D7WH64_9GAMM)

HSP 1 Score: 429 bits (1104), Expect = 6.850e-146
Identity = 201/282 (71.28%), Postives = 236/282 (83.69%), Query Frame = 1
Query:    1 WLIERLPVPSRPREYEFSRLNINYTVTSKRRLKLLVDEGFVDGWDDPRMPTLCGIRRRGYTPASIRRFCEMVGVSRADGVVDMAMLEHALRDDLNENVPRAMCVIDPLKLVITNLPDDHVEMLTAAGHPQREGFADRQLPFTREVWIEREDFREEANKKYKRLVLGKKVRLRNGYVLTADNVIKDVDGRITEVHCSYDPDTLGSDPADGVKPKGVIHWVSVSHGRRATVRLYDRLFAHETPGRGDTDFRDQINPDSLTVYEDCWIEPGAANHEQDAIFKIAR 846
            W IE LPVP+ P++YEF+RLNINYTVTSKR+LK LVDE  V GWDDPRMPT+ G+RRRG+TPA++R FCEMVGV+R++G+VDMAMLEHA+RDDL++N PRAMCV+DPLKLVI N P   VE L A GHP R+   +RQLPFTREV+IER+DFREEANKK+KRLVLGKKVRLRN YVL A+ V+KD  G I EVHCSYDPDTLG+DP+DGVKPKGVIHWVS S GRRATVR+YDRLF H +P RG  DF + +NPDSL+V EDCWIEPG AN   ++ F+  R
Sbjct:  244 WFIENLPVPAEPKQYEFARLNINYTVTSKRKLKALVDEKIVAGWDDPRMPTIAGMRRRGFTPAALRHFCEMVGVARSEGIVDMAMLEHAIRDDLDKNAPRAMCVMDPLKLVIHNYPQGQVEQLDAPGHPNRDDLGERQLPFTREVYIERDDFREEANKKFKRLVLGKKVRLRNAYVLLAEQVVKDAQGNIVEVHCSYDPDTLGADPSDGVKPKGVIHWVSASEGRRATVRIYDRLFNHASPDRGGEDFLEHVNPDSLSVVEDCWIEPGLANCAPESRFQFER 525          
BLAST of mRNA_C-australica_Contig_9862.1.1 vs. uniprot
Match: A0A2E9SID5_9GAMM (Glutamine--tRNA ligase n=2 Tax=Spongiibacter TaxID=630749 RepID=A0A2E9SID5_9GAMM)

HSP 1 Score: 426 bits (1095), Expect = 1.630e-144
Identity = 200/282 (70.92%), Postives = 234/282 (82.98%), Query Frame = 1
Query:    1 WLIERLPVPSRPREYEFSRLNINYTVTSKRRLKLLVDEGFVDGWDDPRMPTLCGIRRRGYTPASIRRFCEMVGVSRADGVVDMAMLEHALRDDLNENVPRAMCVIDPLKLVITNLPDDHVEMLTAAGHPQREGFADRQLPFTREVWIEREDFREEANKKYKRLVLGKKVRLRNGYVLTADNVIKDVDGRITEVHCSYDPDTLGSDPADGVKPKGVIHWVSVSHGRRATVRLYDRLFAHETPGRGDTDFRDQINPDSLTVYEDCWIEPGAANHEQDAIFKIAR 846
            W I  LPVP  P++YEF+RLNINYTVTSKR+LK LVDEG V GWDDPRMPT+ G+RRRG+TPAS+R FCEMVGV+R++G+VDMAMLEHA+RDDL++N PRAMCV++PLKLVITN P+D VE L A GHP R+   +R LPFTREV+IER+DFREEANKK+KRLVLGKKVRLRN YVL A+ V+KD DG ITEVHCSYDPDTLG DPADG+KPKGVIHWVS S GR+ATVR YDRLF HE P RG  +F   +NP SL V E+CWIEPG A+   ++ F+  R
Sbjct:  244 WFIANLPVPCEPKQYEFARLNINYTVTSKRKLKALVDEGVVAGWDDPRMPTIAGMRRRGFTPASLRHFCEMVGVARSEGIVDMAMLEHAIRDDLDKNAPRAMCVMEPLKLVITNYPEDKVEQLAAPGHPNRDDLGERVLPFTREVYIERDDFREEANKKFKRLVLGKKVRLRNAYVLLAEEVVKDADGNITEVHCSYDPDTLGEDPADGIKPKGVIHWVSASEGRQATVRCYDRLFNHEAPDRGGEEFMAHVNPQSLDVVENCWIEPGLADCVPESHFQFER 525          
BLAST of mRNA_C-australica_Contig_9862.1.1 vs. uniprot
Match: UPI001447BF55 (glutamine--tRNA ligase/YqeY domain fusion protein n=1 Tax=Spongiibacter sp. KMU-166 TaxID=2721624 RepID=UPI001447BF55)

HSP 1 Score: 424 bits (1091), Expect = 6.770e-144
Identity = 200/282 (70.92%), Postives = 234/282 (82.98%), Query Frame = 1
Query:    1 WLIERLPVPSRPREYEFSRLNINYTVTSKRRLKLLVDEGFVDGWDDPRMPTLCGIRRRGYTPASIRRFCEMVGVSRADGVVDMAMLEHALRDDLNENVPRAMCVIDPLKLVITNLPDDHVEMLTAAGHPQREGFADRQLPFTREVWIEREDFREEANKKYKRLVLGKKVRLRNGYVLTADNVIKDVDGRITEVHCSYDPDTLGSDPADGVKPKGVIHWVSVSHGRRATVRLYDRLFAHETPGRGDTDFRDQINPDSLTVYEDCWIEPGAANHEQDAIFKIAR 846
            W IE LPVP++PR+YEF+RLN+NYTVTSKR+LK LVDE  V GWDDPRMPT+ G+RRRG+TP S+R FCEMVGV+R++GVVD+AMLEHA+RDDL++N PRAMCV+ PLKLVITN P+D VE L+A GHP R+    R LPFTREV+IE++DFREEANKK+KRLVLGKKVRLRN YVL A+ VIKD +G I EVHCSYD DTLG DPADGVKPKGVIHWVS SHGRRA VR YDRLF HE+P RG  DF   +NPDSL V+ DCWIEPG A+   ++ F+  R
Sbjct:  244 WFIENLPVPAQPRQYEFARLNVNYTVTSKRKLKALVDEQVVAGWDDPRMPTIAGMRRRGFTPRSLRHFCEMVGVARSEGVVDVAMLEHAIRDDLDKNAPRAMCVMAPLKLVITNYPEDKVEWLSAPGHPNRDDLGTRSLPFTREVFIEQDDFREEANKKFKRLVLGKKVRLRNAYVLLAEEVIKDAEGNIVEVHCSYDADTLGEDPADGVKPKGVIHWVSASHGRRAVVRCYDRLFNHESPDRGGEDFMQHVNPDSLQVFNDCWIEPGLADAPAESHFQFER 525          
BLAST of mRNA_C-australica_Contig_9862.1.1 vs. uniprot
Match: I2JJI1_9GAMM (Glutamine--tRNA ligase n=3 Tax=Spongiibacteraceae TaxID=1706375 RepID=I2JJI1_9GAMM)

HSP 1 Score: 424 bits (1089), Expect = 1.280e-143
Identity = 198/282 (70.21%), Postives = 237/282 (84.04%), Query Frame = 1
Query:    1 WLIERLPVPSRPREYEFSRLNINYTVTSKRRLKLLVDEGFVDGWDDPRMPTLCGIRRRGYTPASIRRFCEMVGVSRADGVVDMAMLEHALRDDLNENVPRAMCVIDPLKLVITNLPDDHVEMLTAAGHPQREGFADRQLPFTREVWIEREDFREEANKKYKRLVLGKKVRLRNGYVLTADNVIKDVDGRITEVHCSYDPDTLGSDPADGVKPKGVIHWVSVSHGRRATVRLYDRLFAHETPGRGDTDFRDQINPDSLTVYEDCWIEPGAANHEQDAIFKIAR 846
            W +  LPVP++P++YEF+RLNINYTVTSKR+LK+LVDE  VDGWDDPRMPT+ G+RRRGYT  ++R FC+MVGV+R++GVVDMAMLEHA+RDDL++N PRAMCV+DPLKLVITN P+D +E LTA GHP R+   +R LPF REV+IEREDFREEANKK+KRLVLGKKVRLR+ YVL A++V+KD +G I EVHCSYD  TLG DPADGVKPKGVIHWVS SHG++A VRLYDRLF HE P RG  +F D +NPDSLTV E+CWIEPG A+   +A F+  R
Sbjct:  244 WFLAHLPVPAQPKQYEFARLNINYTVTSKRKLKMLVDEKVVDGWDDPRMPTIAGMRRRGYTATALRNFCDMVGVARSEGVVDMAMLEHAIRDDLDKNAPRAMCVMDPLKLVITNYPEDKLEQLTAPGHPNRDDLGERTLPFGREVYIEREDFREEANKKFKRLVLGKKVRLRSAYVLLAESVVKDDEGNIIEVHCSYDDGTLGEDPADGVKPKGVIHWVSASHGKQAVVRLYDRLFTHEAPDRGGEEFLDHVNPDSLTVLENCWIEPGLADAAPEARFQFER 525          
BLAST of mRNA_C-australica_Contig_9862.1.1 vs. uniprot
Match: A0A1Y1SE30_9GAMM (Glutamine--tRNA ligase n=1 Tax=Oceanococcus atlanticus TaxID=1317117 RepID=A0A1Y1SE30_9GAMM)

HSP 1 Score: 421 bits (1082), Expect = 1.560e-142
Identity = 205/283 (72.44%), Postives = 229/283 (80.92%), Query Frame = 1
Query:    1 WLIERLPVPSRPREYEFSRLNINYTVTSKRRLKLLVDEGFVDGWDDPRMPTLCGIRRRGYTPASIRRFCEMVGVSRADGVVDMAMLEHALRDDLNENVPRAMCVIDPLKLVITNLPDDHVEMLTAAGHPQREGFADRQLPFTREVWIEREDFREEANKKYKRLVLGKKVRLRNGYVLTADNVIKDVDGRITEVHCSYDPDTLGSDPADGVKPKGVIHWVSVSHGRRATVRLYDRLFAHETPGRGDTDFRDQINPDSLTVYEDCWIEPGAANHEQDAIFKIARV 849
            WLIE LPVPS PR+YEF+R NINYTVTSKR+LK LVDEG VDGWDDPRMPT+ G+RRRGYTP SIR+F E VGV+RAD  VD+A LE+ +RDDLNEN PRAMCVIDPLKLVITN P D VE L AA HP RE    RQLP TREV+IEREDFR EANKKYKRLVLGK VRLRN YVLTA++V+ D DG ITEVHC YD DTLG++PADG KPKGVIHWVS SHG+RATVRLYDRLF HETP RG+ DF   +NPDSL V  +CWIEP  A  +  + F+  R+
Sbjct:  244 WLIEHLPVPSTPRQYEFARGNINYTVTSKRKLKQLVDEGHVDGWDDPRMPTISGLRRRGYTPLSIRKFWETVGVARADSTVDVAQLEYTIRDDLNENAPRAMCVIDPLKLVITNFPQDKVEWLPAAAHPSREDLGQRQLPLTREVYIEREDFRLEANKKYKRLVLGKSVRLRNAYVLTAEDVVTDADGHITEVHCRYDADTLGANPADGSKPKGVIHWVSASHGKRATVRLYDRLFNHETPDRGNEDFVAHLNPDSLVVRNECWIEPELAQAQAGSSFQFERL 526          
BLAST of mRNA_C-australica_Contig_9862.1.1 vs. uniprot
Match: A0A2S4HEH6_9GAMM (Glutamine--tRNA ligase n=3 Tax=Spongiibacteraceae TaxID=1706375 RepID=A0A2S4HEH6_9GAMM)

HSP 1 Score: 420 bits (1079), Expect = 4.290e-142
Identity = 194/282 (68.79%), Postives = 238/282 (84.40%), Query Frame = 1
Query:    1 WLIERLPVPSRPREYEFSRLNINYTVTSKRRLKLLVDEGFVDGWDDPRMPTLCGIRRRGYTPASIRRFCEMVGVSRADGVVDMAMLEHALRDDLNENVPRAMCVIDPLKLVITNLPDDHVEMLTAAGHPQREGFADRQLPFTREVWIEREDFREEANKKYKRLVLGKKVRLRNGYVLTADNVIKDVDGRITEVHCSYDPDTLGSDPADGVKPKGVIHWVSVSHGRRATVRLYDRLFAHETPGRGDTDFRDQINPDSLTVYEDCWIEPGAANHEQDAIFKIAR 846
            W I  LPVP++P++YEF+RLN+NYTVTSKR+LK+LVDE  VDGWDDPRMPT+ G+RRRG+TPAS+R FC+MVGV+R++GVVD+AMLEHA+RDDL++N PRAMCV+DPLK+VITN P+D VE LTA GHP R+   +R LPF+REV+IER+DFREEANKK+KRLVLGKKVRLR+ YVL A++V+KD  G I EVHCSYD  T G+DP DG+KPKGVIHWVS SHG++ATVRLYDRLF HE P RG  +F D +NP SLT+ E+CWIEPG A+   +A F+  R
Sbjct:  244 WFIANLPVPAQPKQYEFARLNVNYTVTSKRKLKMLVDEKVVDGWDDPRMPTIAGMRRRGFTPASLRHFCDMVGVARSEGVVDVAMLEHAIRDDLDKNAPRAMCVMDPLKIVITNYPEDKVEWLTAPGHPNRDDLGERSLPFSREVFIERDDFREEANKKFKRLVLGKKVRLRSAYVLLAESVVKDEAGNIVEVHCSYDAATHGADPEDGIKPKGVIHWVSASHGKQATVRLYDRLFTHEAPDRGGEEFLDHVNPASLTIVENCWIEPGLADAAPEASFQFER 525          
BLAST of mRNA_C-australica_Contig_9862.1.1 vs. uniprot
Match: U2FRQ1_9GAMM (Glutamine--tRNA ligase n=5 Tax=Gammaproteobacteria TaxID=1236 RepID=U2FRQ1_9GAMM)

HSP 1 Score: 417 bits (1072), Expect = 5.740e-141
Identity = 199/283 (70.32%), Postives = 230/283 (81.27%), Query Frame = 1
Query:    1 WLIERLPVPSRPREYEFSRLNINYTVTSKRRLKLLVDEGFVDGWDDPRMPTLCGIRRRGYTPASIRRFCEMVGVSRADGVVDMAMLEHALRDDLNENVPRAMCVIDPLKLVITNLPDDHVEMLTAAGHPQREGFADRQLPFTREVWIEREDFREEANKKYKRLVLGKKVRLRNGYVLTADNVIKDVDGRITEVHCSYDPDTLGSDPADGVKPKGVIHWVSVSHGRRATVRLYDRLFAHETPGRGDTDFRDQINPDSLTVYEDCWIEPGAANHEQDAIFKIARV 849
            W IE LPVP+RP + EF RLN+NYTVTSKR+LK L+DE  VDGWDDPRMPTL GIRRRGYTPASIR FCE +GV+R DGVVD AMLEHA+RDDLN N PRAMCV+D LK+VITN P+D VE L AAGHP R+   +R LPFTRE+ IE+EDFREEANKKYKRLVLGK+VRLRN YV+ A +V+K+  G I EVHC+YDPDTLG +PADG+KPKGVIHWVS SHG++ATVR YDRLFA E PGRGD D  D +NPDSLTVY++C IEP  A  E +   +  R+
Sbjct:  248 WFIEHLPVPARPVQTEFGRLNLNYTVTSKRKLKRLIDENVVDGWDDPRMPTLAGIRRRGYTPASIRNFCETIGVARTDGVVDAAMLEHAIRDDLNNNAPRAMCVLDGLKIVITNYPEDDVEQLVAAGHPNRDDLGERTLPFTREILIEKEDFREEANKKYKRLVLGKRVRLRNAYVIEATDVVKNDAGEIVEVHCTYDPDTLGDNPADGIKPKGVIHWVSASHGKKATVRQYDRLFAAEHPGRGDRDMLDDLNPDSLTVYDNCVIEPDLATVEPEYRVQFERI 530          
BLAST of mRNA_C-australica_Contig_9862.1.1 vs. uniprot
Match: A0A0F7M6S9_9GAMM (Glutamine--tRNA ligase n=1 Tax=Spongiibacter sp. IMCC21906 TaxID=1620392 RepID=A0A0F7M6S9_9GAMM)

HSP 1 Score: 416 bits (1070), Expect = 1.020e-140
Identity = 197/282 (69.86%), Postives = 231/282 (81.91%), Query Frame = 1
Query:    1 WLIERLPVPSRPREYEFSRLNINYTVTSKRRLKLLVDEGFVDGWDDPRMPTLCGIRRRGYTPASIRRFCEMVGVSRADGVVDMAMLEHALRDDLNENVPRAMCVIDPLKLVITNLPDDHVEMLTAAGHPQREGFADRQLPFTREVWIEREDFREEANKKYKRLVLGKKVRLRNGYVLTADNVIKDVDGRITEVHCSYDPDTLGSDPADGVKPKGVIHWVSVSHGRRATVRLYDRLFAHETPGRGDTDFRDQINPDSLTVYEDCWIEPGAANHEQDAIFKIAR 846
            W I  LPVP++P++YEF+RLN+NYTVTSKR+LK LVDE  V GWDDPRMPT+ G+RRRG+TP S+R FCEMVGV+R++GVVD+AMLEHA+RDDL++N PRAMCV++PLKLVITN PDD VE L+A GHP R+    RQLPF++E++IEREDFREEANKKYKRLVLGKKVRLRN YVL A+  IKD  G I EVHCSYDPDTLG DP+DGVKPKGVIHWVS SHG++A VRLYDRLF HE P RG   F D +NPDSL V E+CWIEP  A    +  F+  R
Sbjct:  245 WFIANLPVPAQPKQYEFARLNLNYTVTSKRKLKNLVDEHVVAGWDDPRMPTIAGMRRRGFTPGSLRHFCEMVGVARSEGVVDVAMLEHAIRDDLDKNAPRAMCVLEPLKLVITNYPDDKVETLSAPGHPNRDDLGMRQLPFSKEIYIEREDFREEANKKYKRLVLGKKVRLRNAYVLFAEEAIKDEAGNIVEVHCSYDPDTLGEDPSDGVKPKGVIHWVSASHGKQAEVRLYDRLFNHEAPDRGGEAFLDHVNPDSLRVLENCWIEPSLAEANPEQGFQFER 526          
BLAST of mRNA_C-australica_Contig_9862.1.1 vs. uniprot
Match: A0A7T4R3U7_9GAMM (Glutamine--tRNA ligase n=1 Tax=Spongiibacter nanhainus TaxID=2794344 RepID=A0A7T4R3U7_9GAMM)

HSP 1 Score: 416 bits (1068), Expect = 2.110e-140
Identity = 189/282 (67.02%), Postives = 233/282 (82.62%), Query Frame = 1
Query:    1 WLIERLPVPSRPREYEFSRLNINYTVTSKRRLKLLVDEGFVDGWDDPRMPTLCGIRRRGYTPASIRRFCEMVGVSRADGVVDMAMLEHALRDDLNENVPRAMCVIDPLKLVITNLPDDHVEMLTAAGHPQREGFADRQLPFTREVWIEREDFREEANKKYKRLVLGKKVRLRNGYVLTADNVIKDVDGRITEVHCSYDPDTLGSDPADGVKPKGVIHWVSVSHGRRATVRLYDRLFAHETPGRGDTDFRDQINPDSLTVYEDCWIEPGAANHEQDAIFKIAR 846
            W +  LPVP +PR+YEF+RLNINYTVTSKR+LK LVDEG V GWDDPRMPT+ G+RRRG+TPAS+R+FCEMVGV+R++G+VDMAMLEHA+RDDL++N PRAMCV+DPLKLVI+N P+D VE L+A GHP R+   +R LPF+RE++IER+DFRE ANKK+KRLVLGKKVRLRN YVL A++V+ D +G + EVHCSYDP TLG DPADGVKPKGVIHWVS SHG++A VR YDRLF HE P RG  DF   +NPDSL + ++CW+EPG      ++ ++  R
Sbjct:  245 WFLNNLPVPCQPRQYEFARLNINYTVTSKRKLKALVDEGVVAGWDDPRMPTIAGMRRRGFTPASLRKFCEMVGVARSEGIVDMAMLEHAIRDDLDKNAPRAMCVMDPLKLVISNYPEDKVEHLSAPGHPNRDDLGERTLPFSREIYIERDDFRESANKKFKRLVLGKKVRLRNAYVLLAEDVVTDAEGNVVEVHCSYDPGTLGEDPADGVKPKGVIHWVSASHGKKAKVRNYDRLFNHEAPDRGGEDFMQHVNPDSLEILDNCWVEPGLVEAAPESHYQFER 526          
BLAST of mRNA_C-australica_Contig_9862.1.1 vs. uniprot
Match: A0A2D4SGG3_9GAMM (Glutamine--tRNA ligase n=1 Tax=Salinisphaeraceae bacterium TaxID=2026789 RepID=A0A2D4SGG3_9GAMM)

HSP 1 Score: 407 bits (1045), Expect = 6.330e-137
Identity = 194/284 (68.31%), Postives = 229/284 (80.63%), Query Frame = 1
Query:    1 WLIERLPVPSRPREYEFSRLNINYTVTSKRRLKLLVDEGFVDGWDDPRMPTLCGIRRRGYTPASIRRFCEMVGVSRADGVVDMAMLEHALRDDLNENVPRAMCVIDPLKLVITNLPDDHVEMLTAAGHPQREGFADRQLPFTREVWIEREDFREEANKKYKRLVLGKKVRLRNGYVLTADNVIKDVDGRITEVHCSYDPDTLGSDPADGVKPKGVIHWVSVSHGRRATVRLYDRLFAHETPGRGDT-DFRDQINPDSLTVYEDCWIEPGAANHEQDAIFKIARV 849
            W +  L +P+ PR+YEF RLN+NYTVTSKR+LKLLVDEG VDGWDDPRMPTL GIRRRGYTPA+IR FC+ +GVSR+DGV+D  +LE+A+RDDLNE+ PRAMCV+DPLKLVITN P+D VE L A GHP  + F  RQLPFTRE+WIE EDFREEANKKYKRLVLGK+VRLRN YV+ A++V++D  G I  VHC YDPDTLG +PADG+KPKGVIHWVS +HGR ATVRLYDRLFA E PGRGD  +    +NP SL V E+C IEPG A+   +  F+  R+
Sbjct:  246 WFVANLTLPASPRQYEFGRLNLNYTVTSKRKLKLLVDEGHVDGWDDPRMPTLAGIRRRGYTPAAIRNFCDTIGVSRSDGVIDAGLLENAVRDDLNEHAPRAMCVLDPLKLVITNYPEDGVEWLAAPGHPNSDAFESRQLPFTRELWIEAEDFREEANKKYKRLVLGKRVRLRNAYVIEAEDVVRDEAGEIVAVHCRYDPDTLGDNPADGIKPKGVIHWVSATHGRTATVRLYDRLFADENPGRGDVGEMLAGLNPASLDVRENCPIEPGLASARPEDRFQFERI 529          
The following BLAST results are available for this feature:
BLAST of mRNA_C-australica_Contig_9862.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2D7WH64_9GAMM6.850e-14671.28Glutamine--tRNA ligase n=3 Tax=Spongiibacter TaxID... [more]
A0A2E9SID5_9GAMM1.630e-14470.92Glutamine--tRNA ligase n=2 Tax=Spongiibacter TaxID... [more]
UPI001447BF556.770e-14470.92glutamine--tRNA ligase/YqeY domain fusion protein ... [more]
I2JJI1_9GAMM1.280e-14370.21Glutamine--tRNA ligase n=3 Tax=Spongiibacteraceae ... [more]
A0A1Y1SE30_9GAMM1.560e-14272.44Glutamine--tRNA ligase n=1 Tax=Oceanococcus atlant... [more]
A0A2S4HEH6_9GAMM4.290e-14268.79Glutamine--tRNA ligase n=3 Tax=Spongiibacteraceae ... [more]
U2FRQ1_9GAMM5.740e-14170.32Glutamine--tRNA ligase n=5 Tax=Gammaproteobacteria... [more]
A0A0F7M6S9_9GAMM1.020e-14069.86Glutamine--tRNA ligase n=1 Tax=Spongiibacter sp. I... [more]
A0A7T4R3U7_9GAMM2.110e-14067.02Glutamine--tRNA ligase n=1 Tax=Spongiibacter nanha... [more]
A0A2D4SGG3_9GAMM6.330e-13768.31Glutamine--tRNA ligase n=1 Tax=Salinisphaeraceae b... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-australica_Contig_9862contigC-australica_Contig_9862:5..853 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Chrysoparadoxa australica CS_1217 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog1123279.ATUS01000001_gene923
Preferred nameglnS
PFAMstRNA-synt_1c,tRNA-synt_1c_C
Model size849
Max annot lvl1236|Gammaproteobacteria
KEGG rclassRC00055,RC00523
KEGG koko:K01886
KEGG ReactionR03652
KEGG Pathwayko00970,ko01100,map00970,map01100
KEGG ModuleM00359,M00360
Hectar predicted targeting categoryother localisation
GOsGO:0003674,GO:0003824,GO:0004812,GO:0004819,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006425,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576
Exons1
Evalue2.67e-145
EggNOG OGsCOG0008@1|root,COG0008@2|Bacteria,1MUC8@1224|Proteobacteria,1RQ7G@1236|Gammaproteobacteria,1J4EK@118884|unclassified Gammaproteobacteria
EC6.1.1.18
DescriptionCOG0008 Glutamyl- and glutaminyl-tRNA synthetases
Cds size849
COG categoryJ
BiGG ReactioniECIAI39_1322.ECIAI39_0637
BRITEko00000,ko00001,ko00002,ko01000,ko01007,ko03016
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1682588853.188116-CDS-C-australica_Contig_9862:4..8531682588853.188116-CDS-C-australica_Contig_9862:4..853Chrysoparadoxa australica CS_1217CDSC-australica_Contig_9862 5..853 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_C-australica_Contig_9862.1.1prot_C-australica_Contig_9862.1.1Chrysoparadoxa australica CS_1217polypeptideC-australica_Contig_9862 5..853 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_C-australica_Contig_9862.1.1

>prot_C-australica_Contig_9862.1.1 ID=prot_C-australica_Contig_9862.1.1|Name=mRNA_C-australica_Contig_9862.1.1|organism=Chrysoparadoxa australica CS_1217|type=polypeptide|length=283bp
WLIERLPVPSRPREYEFSRLNINYTVTSKRRLKLLVDEGFVDGWDDPRMP
TLCGIRRRGYTPASIRRFCEMVGVSRADGVVDMAMLEHALRDDLNENVPR
AMCVIDPLKLVITNLPDDHVEMLTAAGHPQREGFADRQLPFTREVWIERE
DFREEANKKYKRLVLGKKVRLRNGYVLTADNVIKDVDGRITEVHCSYDPD
TLGSDPADGVKPKGVIHWVSVSHGRRATVRLYDRLFAHETPGRGDTDFRD
QINPDSLTVYEDCWIEPGAANHEQDAIFKIARV
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mRNA from alignment at C-australica_Contig_9862:5..853+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_C-australica_Contig_9862.1.1 ID=mRNA_C-australica_Contig_9862.1.1|Name=mRNA_C-australica_Contig_9862.1.1|organism=Chrysoparadoxa australica CS_1217|type=mRNA|length=849bp|location=Sequence derived from alignment at C-australica_Contig_9862:5..853+ (Chrysoparadoxa australica CS_1217)
TGGCTGATCGAGCGCCTGCCGGTGCCCTCGCGCCCGCGCGAGTACGAATT CAGCCGGCTGAACATCAACTACACCGTCACCAGCAAGCGGCGTCTCAAAC TGCTGGTGGATGAGGGTTTCGTCGATGGCTGGGACGACCCGCGCATGCCC ACGCTCTGCGGTATTCGCCGGCGCGGCTACACCCCGGCGTCGATCCGCCG CTTCTGCGAGATGGTGGGGGTATCGCGTGCCGACGGCGTGGTGGACATGG CGATGCTGGAACACGCGCTGCGCGACGACCTCAACGAGAACGTCCCCCGC GCCATGTGCGTGATCGACCCGCTGAAACTGGTGATCACCAACCTGCCGGA CGATCATGTGGAAATGCTCACCGCTGCCGGTCATCCGCAGCGCGAGGGCT TCGCCGACCGCCAGCTGCCTTTCACCCGCGAGGTGTGGATCGAGCGCGAG GATTTCCGCGAGGAAGCCAACAAGAAGTACAAGCGGCTGGTGCTGGGCAA GAAGGTGCGGCTGCGCAATGGCTACGTGCTGACGGCGGATAATGTCATCA AGGACGTGGACGGCCGCATCACCGAAGTGCACTGCAGCTATGATCCGGAC ACGCTGGGCAGCGACCCGGCCGACGGCGTCAAGCCCAAGGGCGTGATCCA CTGGGTGTCCGTCAGCCACGGCAGGCGCGCCACCGTGCGGTTGTATGACC GGCTGTTCGCCCATGAAACGCCGGGCCGCGGCGACACCGACTTCCGCGAC CAGATCAATCCGGATTCGCTCACGGTATACGAGGACTGCTGGATCGAGCC CGGCGCGGCCAATCACGAGCAAGATGCAATTTTCAAGATCGCTCGGGTC
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Coding sequence (CDS) from alignment at C-australica_Contig_9862:5..853+

>mRNA_C-australica_Contig_9862.1.1 ID=mRNA_C-australica_Contig_9862.1.1|Name=mRNA_C-australica_Contig_9862.1.1|organism=Chrysoparadoxa australica CS_1217|type=CDS|length=849bp|location=Sequence derived from alignment at C-australica_Contig_9862:5..853+ (Chrysoparadoxa australica CS_1217)
TGGCTGATCGAGCGCCTGCCGGTGCCCTCGCGCCCGCGCGAGTACGAATT
CAGCCGGCTGAACATCAACTACACCGTCACCAGCAAGCGGCGTCTCAAAC
TGCTGGTGGATGAGGGTTTCGTCGATGGCTGGGACGACCCGCGCATGCCC
ACGCTCTGCGGTATTCGCCGGCGCGGCTACACCCCGGCGTCGATCCGCCG
CTTCTGCGAGATGGTGGGGGTATCGCGTGCCGACGGCGTGGTGGACATGG
CGATGCTGGAACACGCGCTGCGCGACGACCTCAACGAGAACGTCCCCCGC
GCCATGTGCGTGATCGACCCGCTGAAACTGGTGATCACCAACCTGCCGGA
CGATCATGTGGAAATGCTCACCGCTGCCGGTCATCCGCAGCGCGAGGGCT
TCGCCGACCGCCAGCTGCCTTTCACCCGCGAGGTGTGGATCGAGCGCGAG
GATTTCCGCGAGGAAGCCAACAAGAAGTACAAGCGGCTGGTGCTGGGCAA
GAAGGTGCGGCTGCGCAATGGCTACGTGCTGACGGCGGATAATGTCATCA
AGGACGTGGACGGCCGCATCACCGAAGTGCACTGCAGCTATGATCCGGAC
ACGCTGGGCAGCGACCCGGCCGACGGCGTCAAGCCCAAGGGCGTGATCCA
CTGGGTGTCCGTCAGCCACGGCAGGCGCGCCACCGTGCGGTTGTATGACC
GGCTGTTCGCCCATGAAACGCCGGGCCGCGGCGACACCGACTTCCGCGAC
CAGATCAATCCGGATTCGCTCACGGTATACGAGGACTGCTGGATCGAGCC
CGGCGCGGCCAATCACGAGCAAGATGCAATTTTCAAGATCGCTCGGGTC
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