mRNA_C-australica_Contig_985.8.1 (mRNA) Chrysoparadoxa australica CS_1217
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Overview
Homology
BLAST of mRNA_C-australica_Contig_985.8.1 vs. uniprot
Match: D7FMZ9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FMZ9_ECTSI) HSP 1 Score: 248 bits (634), Expect = 1.380e-75 Identity = 120/202 (59.41%), Postives = 153/202 (75.74%), Query Frame = 2
Query: 185 LQQTKFSKRIFRIFDEDGSGEIDFREFVLSMWNYCTLSKAALVLFAFDXXXXXXXXXXXXSEIELMLKEIYGKEFCVSTHAQNIMRELHGGELG-DKDVNIEQFREFCRHHPACLYPAFMLQQTLQNMILGSRFWGTCGDKRVALSNGEYMTMTHLLEAHVNEQAFKELCETKDKNTGVAVQPLAESDAAPILQASGTLANR 787
++Q+KF+KRIFRIFDEDGSG +DFREFV+S+WNYCTLSKAAL++FAFD E+EL+LKE+YG+EF +THAQ IM +L G ELG +++N++QFREFCR HPA LYPAF+LQ +Q ILGS+FW C + RVALS+G Y+ + +L AHVNE+AF L ++KD TG V PLA+SD +LQ SGTLANR
Sbjct: 1 MKQSKFTKRIFRIFDEDGSGSVDFREFVMSLWNYCTLSKAALIMFAFDLYDNDNSGEIDIGEVELLLKEVYGREFQSNTHAQTIMAKLRGSELGLARNINVDQFREFCRTHPAVLYPAFVLQTQMQEKILGSKFWIACSNARVALSSGAYVDIAAILHAHVNEKAFAALVDSKDAVTGKQVTPLADSDNVAMLQMSGTLANR 202
BLAST of mRNA_C-australica_Contig_985.8.1 vs. uniprot
Match: A0A2R5GVS2_9STRA (Calcium-dependent protein kinase 1 n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GVS2_9STRA) HSP 1 Score: 197 bits (500), Expect = 1.440e-54 Identity = 109/282 (38.65%), Postives = 159/282 (56.38%), Query Frame = 2
Query: 2 GGAVSRSNIYNTSIEARKYKSEFKALKLGDNQVKALWDVFCEIDRDGSGQICTWELFEHIQLQQTKFSKRIFRIFDEDGSGEIDFREFVLSMWNYCTLSKAALVLFAFDXXXXXXXXXXXXSEIELMLKEIYGKEFCVSTHAQNIMRELH---GGELGDKDVNIEQFREFCRHHPACLYPAFMLQQTLQNMILGSRFWGTCGDKRVALSNGEYMTMTHLLEAHVNEQAFKELCETKDKNTGVAVQP----------LAESDAA---PILQASGTLANRRQLQ 799
G A SR + EA ++ + F+ + L + V+ L+ F +ID+DGSG++ +EL +H+++ +T F+KR+F IFDEDGSG IDFREFVLS WNY TL+K+ L++FAFD EI M K++YG +F S A I+ ++H G + +E+F FC HHP LYPAF QQ LQ I+G FW +R+ + NG +++ +L AH+++ FKELC D + + + L SD A I A+GT+A RR Q
Sbjct: 2 GTAASRGRL---PPEALEHMALFRTIGLNERHVEKLYRGFSKIDKDGSGELSLFELLDHLKVSKTPFTKRVFSIFDEDGSGSIDFREFVLSTWNYATLTKSTLIIFAFDLYDGDESGSMELEEIMDMCKDVYGADFEKSRLAAQIIDKIHKLNDPTRGSGIITLEKFAVFCEHHPGLLYPAFTFQQALQKAIIGVTFWTKLSKERLVMPNGVQVSIKDVLTAHIDKNKFKELCVHNDPESDMLLPEKMQREARKTLLQRSDTANFKEIYDATGTVARRRSTQ 280
BLAST of mRNA_C-australica_Contig_985.8.1 vs. uniprot
Match: A0A7S3XL51_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XL51_HETAK) HSP 1 Score: 176 bits (446), Expect = 1.410e-47 Identity = 107/214 (50.00%), Postives = 141/214 (65.89%), Query Frame = 2
Query: 65 EFKALKLGDNQVKALWDVFCEIDRDGSGQICTWELFEHIQLQQTKFSKRIFRIFDEDGSGEIDFREFVLSMWNYCTLSKAALVLFAFDXXXXXXXXXXXXSEIELMLKEIYGKEFCVSTHAQNIMRELHGGELGDK---------DVNIEQFREFCRHHPACLYPAFMLQQTLQNMILGSRFWGTCGDKRVALSNGEYMTMTHLLEAHVNEQAF 679
EFK+L L + V AL + ID D SG I EL ++ L ++F+ R+FRIFDEDGSGE+DFREFV+SMWNYCTL+K ALV+FAFD XXXXXXXXXXX E+ELMLKE+YG+ F S AQ ++R + + GD +V EQF +FCR H L PAF +Q+TL+ + G R W +R +S+G Y+++ LLE+H+N F
Sbjct: 26 EFKSLGLHNRDVWALHSSYAAIDGDNSGTIEVKELMAYLGLH-SQFTNRVFRIFDEDGSGELDFREFVVSMWNYCTLAKNALVMFAFDLXXXXXXXXXXXXEVELMLKEVYGEGFQASQLAQKVLRHMRMID-GDARLPLSMQRCEVTAEQFGQFCRKHATLLLPAFTMQETLREAVGGKRLWERLSRRRFEVSDGAYISVNQLLESHLNLAQF 237
BLAST of mRNA_C-australica_Contig_985.8.1 vs. uniprot
Match: A0A7S3HMR9_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HMR9_9STRA) HSP 1 Score: 180 bits (456), Expect = 7.210e-45 Identity = 108/270 (40.00%), Postives = 174/270 (64.44%), Query Frame = 2
Query: 38 SIEARKYKSEFKALKLGDNQVKALWDVFCEIDRDGSGQICTWELFEHIQLQQTKFSKRIFRIFDEDGSGEIDFREFVLSMWNYCTLSKAALVLFAFDXXXXXXXXXXXXSEIELMLKEIYGKEFCVSTH-AQNIMRELHGGELGDKDVNIEQFREFCRHHPACLYPAFMLQQTLQNMILGSRFWGTCGDKRVALSNGEYMTMTHLLEAHVNEQAFKELCETKDKNTGVAVQPLAESD---AAPILQASGTLANRRQLQEAVNENMTQIKV 835
+ + +++ ++F+A++L ++V+ L+ +F +D D SGQI EL HI L++T+F++RIF IFD DGSGEIDFREFVLS+WNYCTL+KA L +FAF XXXXXXXXXXX E+ ML++IYGK+ S + A+ + +L + +NIE++R+F R H A L+PAF +Q LQ +LG RFW ++R+ SNG+Y+++ + + +V+ A K+ +A+ + D +++ +GT A+R+++ E + +K+
Sbjct: 13 TAQFQEWMTQFQAMQLSKSEVRTLYYIFARVDFDKSGQIALAELLAHIDLERTRFTERIFSIFDADGSGEIDFREFVLSLWNYCTLTKATLDMFAFXXXXXXXXXXXXGKEVTQMLQDIYGKKEVKSNYLARTVANDLKAIDDSGTLLNIEEYRQFVRTHQALLFPAFQMQLALQRKVLGVRFWERNAERRLKFSNGKYISVGNFILMNVD--ANKKAVLHHQSPIAMAMGGNSHKDDQMVGKMMELAGTKASRKKVTEENFQRQASMKI 280
BLAST of mRNA_C-australica_Contig_985.8.1 vs. uniprot
Match: A0A7S2F8V1_9STRA (Hypothetical protein (Fragment) n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2F8V1_9STRA) HSP 1 Score: 164 bits (416), Expect = 1.920e-44 Identity = 91/147 (61.90%), Postives = 114/147 (77.55%), Query Frame = 2
Query: 125 EIDRDGSGQICTWELFEHIQLQQTKFSKRIFRIFDEDGSGEIDFREFVLSMWNYCTLSKAALVLFAFDXXXXXXXXXXXXSEIELMLKEIYGKEFCVSTHAQNIMRELH--GGELGDKDVNIEQFREFCRHHPACLYPAFMLQQTLQ 559
+ID+DGSG I WE+ EH+QLQ+ KF+KR+F I DED SGEIDFREFV+++WNYCTL KAAL+LFAFDXXXXXXXXXXXX EI+LMLKE+YGK+ S AQ +M ++ D+++ E+F +F R +PA LYPAF LQ TLQ
Sbjct: 1 KIDQDGSGSISLWEMLEHLQLQRNKFTKRVFSIMDEDNSGEIDFREFVIALWNYCTLGKAALILFAFDXXXXXXXXXXXXDEIKLMLKEVYGKDVSNSQQAQMVMGKIQKFSESKADEEIGKEEFSDFVRRNPALLYPAFQLQMTLQ 147
BLAST of mRNA_C-australica_Contig_985.8.1 vs. uniprot
Match: A0A7S4A064_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4A064_9STRA) HSP 1 Score: 177 bits (448), Expect = 2.140e-44 Identity = 109/260 (41.92%), Postives = 160/260 (61.54%), Query Frame = 2
Query: 23 NIYNTSIEARKYKSEFKALKLGDNQVKALWDVFCEIDRDGSGQICTWELFEHIQLQQTKFSKRIFRIFDEDGSGEIDFREFVLSMWNYCTLSKAALVLFAFDXXXXXXXXXXXXSEIELMLKEIYGKEFCVSTHAQNIMRELHG-GELGDKD-VNIEQFREFCRHHPACLYPAFMLQQTLQNMILGSRFWGTCGDKRVALSNGEYMTMTHLLEAHVNEQAFKELCETKDKNTGVAVQPLAES--DAAPILQASGTLANRR 790
+IY+ + R +S F++L L ++ V L + F ID+DGSG I WEL +++ LQ+ +F+KR+F IFD DGS +IDF+EFV+++W YCTL + LV+F XXXXXXXXXXXX MLKE+YGK + +T A N++R ++ + D D V++E F EFCR HPA L PAF +Q T++ I+G +W ++RV + M + LL+AH+ E AF D A++ A+ D + +GT+A RR
Sbjct: 235 SIYSKNAAVRPLRSTFESLGLKEDDVARLHEQFVIIDKDGSGAIELWELLDYLDLQRNRFAKRVFAIFDADGSNQIDFKEFVVALWQYCTLGRPQLVMFXXXXXXXXXXXXXXXXXFNAMLKELYGKRYSKNTTAVNLLRHINAMTKRRDTDEVDVEAFAEFCRTHPAMLMPAFAMQTTMRARIMGGAWWDRRSNERVKVGR-HTMRIHDLLKAHLQEDAFHSFMRAVDSGDAKALKRDADKHRDWKSATEVTGTVAQRR 493
BLAST of mRNA_C-australica_Contig_985.8.1 vs. uniprot
Match: A0A482T6P1_9ARCH (Uncharacterized protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482T6P1_9ARCH) HSP 1 Score: 165 bits (418), Expect = 9.010e-44 Identity = 77/197 (39.09%), Postives = 120/197 (60.91%), Query Frame = 2
Query: 62 SEFKALKLGDNQVKALWDVFCEIDRDGSGQICTWELFEHIQLQQTKFSKRIFRIFDEDGSGEIDFREFVLSMWNYCTLSKAALVLFAFDXXXXXXXXXXXXSEIELMLKEIYGKEFCVSTHAQNIMRELHGGELGDKDVNIEQFREFCRHHPACLYPAFMLQQTLQNMILGSRFWGTCGDKRVALSNGEYMTMTHLL 652
++FKAL+L DN+++ +++ IDRD SG I EL ++ ++ T FS R F +FD + SG+IDFREFVLS+WNYCTL A L ++ FD SE++ MLK++YGK F + A +M + EL D ++ +F +F R H L+PAF +Q +Q + G FW C ++R+ +S G+Y ++T ++
Sbjct: 18 AQFKALRLTDNEIRKFLNMYQAIDRDNSGAIDLQELLNYLDIENTSFSHRAFSVFDINNSGKIDFREFVLSLWNYCTLGNATLDVYTFDLYDKDKSGILSESEVQAMLKDLYGKTFQTNPRATAVMNAMKKSELRG-DFDLPKFTKFVRSHQEMLFPAFQMQLKIQEKVFGRGFWERCSNRRIEISKGKYASITEIM 213
BLAST of mRNA_C-australica_Contig_985.8.1 vs. uniprot
Match: A0A4Q3A667_9BACT (Uncharacterized protein (Fragment) n=1 Tax=Verrucomicrobiaceae bacterium TaxID=2026800 RepID=A0A4Q3A667_9BACT) HSP 1 Score: 168 bits (425), Expect = 1.410e-43 Identity = 79/206 (38.35%), Postives = 127/206 (61.65%), Query Frame = 2
Query: 65 EFKALKLGDNQVKALWDVFCEIDRDGSGQICTWELFEHIQLQQTKFSKRIFRIFDEDGSGEIDFREFVLSMWNYCTLSKAALVLFAFDXXXXXXXXXXXXSEIELMLKEIYGKEFCVSTHAQNIMRELHGGELGDKDVNIEQFREFCRHHPACLYPAFMLQQTLQNMILGSRFWGTCGDKRVALSNGEYMTMTHLLEAHVNEQAFK 682
EF ALKL ++V+ L+ +F +D D SG + EL ++++ + F R+F IFDEDGSG+IDFREFVLS+WNYCTLSKA L LFAFD E E +L+++YG + + + ++I++F+ F ++HP+ L+PAF LQ L++ +LGS FW ++R+ LS+G+++ ++ L+E +V+ ++
Sbjct: 19 EFDALKLRPSEVRQLYRIFARVDVDHSGTVGLKELLNYLEMGEAVFKDRVFSIFDEDGSGQIDFREFVLSLWNYCTLSKATLDLFAFDLYDKNNDGELSAEEAEDLLRDLYGAHYAQHNPTARFVAFELKKVCAESSLDIDRFQNFIQYHPSLLFPAFQLQHALRSRVLGSGFWERASERRIELSDGKFVPISRLMELNVSPALYQ 224
BLAST of mRNA_C-australica_Contig_985.8.1 vs. uniprot
Match: A0A7S1CAR3_9STRA (Hypothetical protein n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1CAR3_9STRA) HSP 1 Score: 168 bits (425), Expect = 1.090e-42 Identity = 111/283 (39.22%), Postives = 161/283 (56.89%), Query Frame = 2
Query: 2 GGAVSRSNIYNTSIEA--RKYKSEFKALKLGDNQVKALWDVFCEIDRDGSGQICTWELFEHIQLQQTKFSKRIFRIFDEDGSGEIDFREFVLSMWNYCTLSKAALVLFAFDXXXXXXXXXXXXSEIELMLKEIYGKEFCVSTHAQNIMREL----HGGELGDK---DVNIEQFREFCRHHPACLYPAFMLQQTLQNMILGSRFWGTCGDKRVALSNGEYMTMTHLLE--AHVNEQAFKELCE---TKDKNTG------VAVQPLAESDAAPILQASGTLANRR 790
G S IYN ++ RKY+ + L + D + K L++ F D D SG+I E F+++ L++TKF+KR F +FD DGSG+IDFREFV+SMWNYCT ++ +L+ F XXXXXXXXXXXX ++L++KE+YG F S +A+ IM ++ H L K ++ F F + HPA L+PAF LQQ LQ ++G FW KR L + T+L E +H+NE AF EL D + G + +Q +++ +P + +G RR
Sbjct: 2 GLCFSNMAIYNKLVDENLRKYQVALRTLDIPDKEAKELFEYFFRCDEDNSGEISVKEFFDYVDLERTKFAKRAFSLFDHDGSGQIDFREFVVSMWNYCTFTQQSLIEFXXXXXXXXXXXXXXXXXMQLIVKEVYGSSFRTSAYAKKIMEKVAQIGHASSLDVKTAAQIDKGMFARFTQKHPAMLFPAFRLQQELQKRVMGVAFWKRAAKKRARL----FADSTNLKEFMSHINETAFMELATFDTAADMDIGKHGEPPLRLQSMSDDGLSPAMGGAGGQPRRR 280
BLAST of mRNA_C-australica_Contig_985.8.1 vs. uniprot
Match: A0A8J2SI54_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SI54_9STRA) HSP 1 Score: 169 bits (427), Expect = 1.840e-42 Identity = 106/264 (40.15%), Postives = 163/264 (61.74%), Query Frame = 2
Query: 68 FKALKLGDNQVKALWDVFCEIDRDGSGQICTWELFEHIQLQQTKFSKRIFRIFDEDGSGEIDFREFVLSMWNYCTLSKAALVLFAFDXXXXXXXXXXXXSEIELMLKEIYGKEFCVSTHAQNIMRELHGGELGDK----DVNIEQFREFCRHHPACLYPAFMLQQTLQNMILGSRFWGTCGDKRVALSNGEYMTMTHLLEAHVNEQAFKELCETKDKNTGVAVQPLAES------DAAPILQASGTLANRRQLQEAVNENMTQI 829
F++L L ++ V L + F +ID+DGSG I WE+ +H+ L++ +F+KR+F IFD DGS EIDF+EFV+++W YCTL +A L++FA XXXXXXXXXXXX MLKE+YG+ + + A N++R ++ EL + +V++E F F + HPA L PAF +QQTL+ ILG +W +RV + NG + + L++AH++E AF + +K+ + AE+ D ++ +G +A RR Q N ++I
Sbjct: 43 FESLGLKEDDVARLHEQFLKIDKDGSGTIELWEMLDHLDLKRNRFAKRVFAIFDVDGSNEIDFKEFVVALWQYCTLGRAQLIMFAXXXXXXXXXXXXXXXXXNTMLKELYGRRYAKNQIALNLLRHIN--ELNKRHDTEEVDVETFAAFVKSHPALLQPAFSMQQTLRERILGGAWWDRRSHERVKV-NGMNLRIHDLMKAHLHEGAFHAFMKAVEKSDAKEYKKDAEAHRDFSVDWHKTVKVTGMVAQRRAKQGIYNPQSSEI 303 The following BLAST results are available for this feature:
BLAST of mRNA_C-australica_Contig_985.8.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-australica_Contig_985.8.1 >prot_C-australica_Contig_985.8.1 ID=prot_C-australica_Contig_985.8.1|Name=mRNA_C-australica_Contig_985.8.1|organism=Chrysoparadoxa australica CS_1217|type=polypeptide|length=289bp MWNYCTLSKAALVLFAFDLYDQDNSGAIDVSEIELMLKEIYGKEFCVSTHback to top mRNA from alignment at C-australica_Contig_985:13851..17204- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-australica_Contig_985.8.1 ID=mRNA_C-australica_Contig_985.8.1|Name=mRNA_C-australica_Contig_985.8.1|organism=Chrysoparadoxa australica CS_1217|type=mRNA|length=3354bp|location=Sequence derived from alignment at C-australica_Contig_985:13851..17204- (Chrysoparadoxa australica CS_1217)back to top Coding sequence (CDS) from alignment at C-australica_Contig_985:13851..17204- >mRNA_C-australica_Contig_985.8.1 ID=mRNA_C-australica_Contig_985.8.1|Name=mRNA_C-australica_Contig_985.8.1|organism=Chrysoparadoxa australica CS_1217|type=CDS|length=867bp|location=Sequence derived from alignment at C-australica_Contig_985:13851..17204- (Chrysoparadoxa australica CS_1217)back to top |