mRNA_C-australica_Contig_985.8.1 (mRNA) Chrysoparadoxa australica CS_1217

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_C-australica_Contig_985.8.1
Unique NamemRNA_C-australica_Contig_985.8.1
TypemRNA
OrganismChrysoparadoxa australica CS_1217 (Chrysoparadoxa australica CS_1217)
Homology
BLAST of mRNA_C-australica_Contig_985.8.1 vs. uniprot
Match: D7FMZ9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FMZ9_ECTSI)

HSP 1 Score: 248 bits (634), Expect = 1.380e-75
Identity = 120/202 (59.41%), Postives = 153/202 (75.74%), Query Frame = 2
Query:  185 LQQTKFSKRIFRIFDEDGSGEIDFREFVLSMWNYCTLSKAALVLFAFDXXXXXXXXXXXXSEIELMLKEIYGKEFCVSTHAQNIMRELHGGELG-DKDVNIEQFREFCRHHPACLYPAFMLQQTLQNMILGSRFWGTCGDKRVALSNGEYMTMTHLLEAHVNEQAFKELCETKDKNTGVAVQPLAESDAAPILQASGTLANR 787
            ++Q+KF+KRIFRIFDEDGSG +DFREFV+S+WNYCTLSKAAL++FAFD             E+EL+LKE+YG+EF  +THAQ IM +L G ELG  +++N++QFREFCR HPA LYPAF+LQ  +Q  ILGS+FW  C + RVALS+G Y+ +  +L AHVNE+AF  L ++KD  TG  V PLA+SD   +LQ SGTLANR
Sbjct:    1 MKQSKFTKRIFRIFDEDGSGSVDFREFVMSLWNYCTLSKAALIMFAFDLYDNDNSGEIDIGEVELLLKEVYGREFQSNTHAQTIMAKLRGSELGLARNINVDQFREFCRTHPAVLYPAFVLQTQMQEKILGSKFWIACSNARVALSSGAYVDIAAILHAHVNEKAFAALVDSKDAVTGKQVTPLADSDNVAMLQMSGTLANR 202          
BLAST of mRNA_C-australica_Contig_985.8.1 vs. uniprot
Match: A0A2R5GVS2_9STRA (Calcium-dependent protein kinase 1 n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GVS2_9STRA)

HSP 1 Score: 197 bits (500), Expect = 1.440e-54
Identity = 109/282 (38.65%), Postives = 159/282 (56.38%), Query Frame = 2
Query:    2 GGAVSRSNIYNTSIEARKYKSEFKALKLGDNQVKALWDVFCEIDRDGSGQICTWELFEHIQLQQTKFSKRIFRIFDEDGSGEIDFREFVLSMWNYCTLSKAALVLFAFDXXXXXXXXXXXXSEIELMLKEIYGKEFCVSTHAQNIMRELH---GGELGDKDVNIEQFREFCRHHPACLYPAFMLQQTLQNMILGSRFWGTCGDKRVALSNGEYMTMTHLLEAHVNEQAFKELCETKDKNTGVAVQP----------LAESDAA---PILQASGTLANRRQLQ 799
            G A SR  +     EA ++ + F+ + L +  V+ L+  F +ID+DGSG++  +EL +H+++ +T F+KR+F IFDEDGSG IDFREFVLS WNY TL+K+ L++FAFD             EI  M K++YG +F  S  A  I+ ++H       G   + +E+F  FC HHP  LYPAF  QQ LQ  I+G  FW     +R+ + NG  +++  +L AH+++  FKELC   D  + + +            L  SD A    I  A+GT+A RR  Q
Sbjct:    2 GTAASRGRL---PPEALEHMALFRTIGLNERHVEKLYRGFSKIDKDGSGELSLFELLDHLKVSKTPFTKRVFSIFDEDGSGSIDFREFVLSTWNYATLTKSTLIIFAFDLYDGDESGSMELEEIMDMCKDVYGADFEKSRLAAQIIDKIHKLNDPTRGSGIITLEKFAVFCEHHPGLLYPAFTFQQALQKAIIGVTFWTKLSKERLVMPNGVQVSIKDVLTAHIDKNKFKELCVHNDPESDMLLPEKMQREARKTLLQRSDTANFKEIYDATGTVARRRSTQ 280          
BLAST of mRNA_C-australica_Contig_985.8.1 vs. uniprot
Match: A0A7S3XL51_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XL51_HETAK)

HSP 1 Score: 176 bits (446), Expect = 1.410e-47
Identity = 107/214 (50.00%), Postives = 141/214 (65.89%), Query Frame = 2
Query:   65 EFKALKLGDNQVKALWDVFCEIDRDGSGQICTWELFEHIQLQQTKFSKRIFRIFDEDGSGEIDFREFVLSMWNYCTLSKAALVLFAFDXXXXXXXXXXXXSEIELMLKEIYGKEFCVSTHAQNIMRELHGGELGDK---------DVNIEQFREFCRHHPACLYPAFMLQQTLQNMILGSRFWGTCGDKRVALSNGEYMTMTHLLEAHVNEQAF 679
            EFK+L L +  V AL   +  ID D SG I   EL  ++ L  ++F+ R+FRIFDEDGSGE+DFREFV+SMWNYCTL+K ALV+FAFD XXXXXXXXXXX E+ELMLKE+YG+ F  S  AQ ++R +   + GD          +V  EQF +FCR H   L PAF +Q+TL+  + G R W     +R  +S+G Y+++  LLE+H+N   F
Sbjct:   26 EFKSLGLHNRDVWALHSSYAAIDGDNSGTIEVKELMAYLGLH-SQFTNRVFRIFDEDGSGELDFREFVVSMWNYCTLAKNALVMFAFDLXXXXXXXXXXXXEVELMLKEVYGEGFQASQLAQKVLRHMRMID-GDARLPLSMQRCEVTAEQFGQFCRKHATLLLPAFTMQETLREAVGGKRLWERLSRRRFEVSDGAYISVNQLLESHLNLAQF 237          
BLAST of mRNA_C-australica_Contig_985.8.1 vs. uniprot
Match: A0A7S3HMR9_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HMR9_9STRA)

HSP 1 Score: 180 bits (456), Expect = 7.210e-45
Identity = 108/270 (40.00%), Postives = 174/270 (64.44%), Query Frame = 2
Query:   38 SIEARKYKSEFKALKLGDNQVKALWDVFCEIDRDGSGQICTWELFEHIQLQQTKFSKRIFRIFDEDGSGEIDFREFVLSMWNYCTLSKAALVLFAFDXXXXXXXXXXXXSEIELMLKEIYGKEFCVSTH-AQNIMRELHGGELGDKDVNIEQFREFCRHHPACLYPAFMLQQTLQNMILGSRFWGTCGDKRVALSNGEYMTMTHLLEAHVNEQAFKELCETKDKNTGVAVQPLAESD---AAPILQASGTLANRRQLQEAVNENMTQIKV 835
            + + +++ ++F+A++L  ++V+ L+ +F  +D D SGQI   EL  HI L++T+F++RIF IFD DGSGEIDFREFVLS+WNYCTL+KA L +FAF XXXXXXXXXXX  E+  ML++IYGK+   S + A+ +  +L   +     +NIE++R+F R H A L+PAF +Q  LQ  +LG RFW    ++R+  SNG+Y+++ + +  +V+  A K+          +A+   +  D      +++ +GT A+R+++ E   +    +K+
Sbjct:   13 TAQFQEWMTQFQAMQLSKSEVRTLYYIFARVDFDKSGQIALAELLAHIDLERTRFTERIFSIFDADGSGEIDFREFVLSLWNYCTLTKATLDMFAFXXXXXXXXXXXXGKEVTQMLQDIYGKKEVKSNYLARTVANDLKAIDDSGTLLNIEEYRQFVRTHQALLFPAFQMQLALQRKVLGVRFWERNAERRLKFSNGKYISVGNFILMNVD--ANKKAVLHHQSPIAMAMGGNSHKDDQMVGKMMELAGTKASRKKVTEENFQRQASMKI 280          
BLAST of mRNA_C-australica_Contig_985.8.1 vs. uniprot
Match: A0A7S2F8V1_9STRA (Hypothetical protein (Fragment) n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2F8V1_9STRA)

HSP 1 Score: 164 bits (416), Expect = 1.920e-44
Identity = 91/147 (61.90%), Postives = 114/147 (77.55%), Query Frame = 2
Query:  125 EIDRDGSGQICTWELFEHIQLQQTKFSKRIFRIFDEDGSGEIDFREFVLSMWNYCTLSKAALVLFAFDXXXXXXXXXXXXSEIELMLKEIYGKEFCVSTHAQNIMRELH--GGELGDKDVNIEQFREFCRHHPACLYPAFMLQQTLQ 559
            +ID+DGSG I  WE+ EH+QLQ+ KF+KR+F I DED SGEIDFREFV+++WNYCTL KAAL+LFAFDXXXXXXXXXXXX EI+LMLKE+YGK+   S  AQ +M ++        D+++  E+F +F R +PA LYPAF LQ TLQ
Sbjct:    1 KIDQDGSGSISLWEMLEHLQLQRNKFTKRVFSIMDEDNSGEIDFREFVIALWNYCTLGKAALILFAFDXXXXXXXXXXXXDEIKLMLKEVYGKDVSNSQQAQMVMGKIQKFSESKADEEIGKEEFSDFVRRNPALLYPAFQLQMTLQ 147          
BLAST of mRNA_C-australica_Contig_985.8.1 vs. uniprot
Match: A0A7S4A064_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4A064_9STRA)

HSP 1 Score: 177 bits (448), Expect = 2.140e-44
Identity = 109/260 (41.92%), Postives = 160/260 (61.54%), Query Frame = 2
Query:   23 NIYNTSIEARKYKSEFKALKLGDNQVKALWDVFCEIDRDGSGQICTWELFEHIQLQQTKFSKRIFRIFDEDGSGEIDFREFVLSMWNYCTLSKAALVLFAFDXXXXXXXXXXXXSEIELMLKEIYGKEFCVSTHAQNIMRELHG-GELGDKD-VNIEQFREFCRHHPACLYPAFMLQQTLQNMILGSRFWGTCGDKRVALSNGEYMTMTHLLEAHVNEQAFKELCETKDKNTGVAVQPLAES--DAAPILQASGTLANRR 790
            +IY+ +   R  +S F++L L ++ V  L + F  ID+DGSG I  WEL +++ LQ+ +F+KR+F IFD DGS +IDF+EFV+++W YCTL +  LV+F   XXXXXXXXXXXX     MLKE+YGK +  +T A N++R ++   +  D D V++E F EFCR HPA L PAF +Q T++  I+G  +W    ++RV +     M +  LL+AH+ E AF       D     A++  A+   D     + +GT+A RR
Sbjct:  235 SIYSKNAAVRPLRSTFESLGLKEDDVARLHEQFVIIDKDGSGAIELWELLDYLDLQRNRFAKRVFAIFDADGSNQIDFKEFVVALWQYCTLGRPQLVMFXXXXXXXXXXXXXXXXXFNAMLKELYGKRYSKNTTAVNLLRHINAMTKRRDTDEVDVEAFAEFCRTHPAMLMPAFAMQTTMRARIMGGAWWDRRSNERVKVGR-HTMRIHDLLKAHLQEDAFHSFMRAVDSGDAKALKRDADKHRDWKSATEVTGTVAQRR 493          
BLAST of mRNA_C-australica_Contig_985.8.1 vs. uniprot
Match: A0A482T6P1_9ARCH (Uncharacterized protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482T6P1_9ARCH)

HSP 1 Score: 165 bits (418), Expect = 9.010e-44
Identity = 77/197 (39.09%), Postives = 120/197 (60.91%), Query Frame = 2
Query:   62 SEFKALKLGDNQVKALWDVFCEIDRDGSGQICTWELFEHIQLQQTKFSKRIFRIFDEDGSGEIDFREFVLSMWNYCTLSKAALVLFAFDXXXXXXXXXXXXSEIELMLKEIYGKEFCVSTHAQNIMRELHGGELGDKDVNIEQFREFCRHHPACLYPAFMLQQTLQNMILGSRFWGTCGDKRVALSNGEYMTMTHLL 652
            ++FKAL+L DN+++   +++  IDRD SG I   EL  ++ ++ T FS R F +FD + SG+IDFREFVLS+WNYCTL  A L ++ FD            SE++ MLK++YGK F  +  A  +M  +   EL   D ++ +F +F R H   L+PAF +Q  +Q  + G  FW  C ++R+ +S G+Y ++T ++
Sbjct:   18 AQFKALRLTDNEIRKFLNMYQAIDRDNSGAIDLQELLNYLDIENTSFSHRAFSVFDINNSGKIDFREFVLSLWNYCTLGNATLDVYTFDLYDKDKSGILSESEVQAMLKDLYGKTFQTNPRATAVMNAMKKSELRG-DFDLPKFTKFVRSHQEMLFPAFQMQLKIQEKVFGRGFWERCSNRRIEISKGKYASITEIM 213          
BLAST of mRNA_C-australica_Contig_985.8.1 vs. uniprot
Match: A0A4Q3A667_9BACT (Uncharacterized protein (Fragment) n=1 Tax=Verrucomicrobiaceae bacterium TaxID=2026800 RepID=A0A4Q3A667_9BACT)

HSP 1 Score: 168 bits (425), Expect = 1.410e-43
Identity = 79/206 (38.35%), Postives = 127/206 (61.65%), Query Frame = 2
Query:   65 EFKALKLGDNQVKALWDVFCEIDRDGSGQICTWELFEHIQLQQTKFSKRIFRIFDEDGSGEIDFREFVLSMWNYCTLSKAALVLFAFDXXXXXXXXXXXXSEIELMLKEIYGKEFCVSTHAQNIMRELHGGELGDKDVNIEQFREFCRHHPACLYPAFMLQQTLQNMILGSRFWGTCGDKRVALSNGEYMTMTHLLEAHVNEQAFK 682
            EF ALKL  ++V+ L+ +F  +D D SG +   EL  ++++ +  F  R+F IFDEDGSG+IDFREFVLS+WNYCTLSKA L LFAFD             E E +L+++YG  +         +         +  ++I++F+ F ++HP+ L+PAF LQ  L++ +LGS FW    ++R+ LS+G+++ ++ L+E +V+   ++
Sbjct:   19 EFDALKLRPSEVRQLYRIFARVDVDHSGTVGLKELLNYLEMGEAVFKDRVFSIFDEDGSGQIDFREFVLSLWNYCTLSKATLDLFAFDLYDKNNDGELSAEEAEDLLRDLYGAHYAQHNPTARFVAFELKKVCAESSLDIDRFQNFIQYHPSLLFPAFQLQHALRSRVLGSGFWERASERRIELSDGKFVPISRLMELNVSPALYQ 224          
BLAST of mRNA_C-australica_Contig_985.8.1 vs. uniprot
Match: A0A7S1CAR3_9STRA (Hypothetical protein n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1CAR3_9STRA)

HSP 1 Score: 168 bits (425), Expect = 1.090e-42
Identity = 111/283 (39.22%), Postives = 161/283 (56.89%), Query Frame = 2
Query:    2 GGAVSRSNIYNTSIEA--RKYKSEFKALKLGDNQVKALWDVFCEIDRDGSGQICTWELFEHIQLQQTKFSKRIFRIFDEDGSGEIDFREFVLSMWNYCTLSKAALVLFAFDXXXXXXXXXXXXSEIELMLKEIYGKEFCVSTHAQNIMREL----HGGELGDK---DVNIEQFREFCRHHPACLYPAFMLQQTLQNMILGSRFWGTCGDKRVALSNGEYMTMTHLLE--AHVNEQAFKELCE---TKDKNTG------VAVQPLAESDAAPILQASGTLANRR 790
            G   S   IYN  ++   RKY+   + L + D + K L++ F   D D SG+I   E F+++ L++TKF+KR F +FD DGSG+IDFREFV+SMWNYCT ++ +L+ F   XXXXXXXXXXXX  ++L++KE+YG  F  S +A+ IM ++    H   L  K    ++   F  F + HPA L+PAF LQQ LQ  ++G  FW     KR  L    +   T+L E  +H+NE AF EL       D + G      + +Q +++   +P +  +G    RR
Sbjct:    2 GLCFSNMAIYNKLVDENLRKYQVALRTLDIPDKEAKELFEYFFRCDEDNSGEISVKEFFDYVDLERTKFAKRAFSLFDHDGSGQIDFREFVVSMWNYCTFTQQSLIEFXXXXXXXXXXXXXXXXXMQLIVKEVYGSSFRTSAYAKKIMEKVAQIGHASSLDVKTAAQIDKGMFARFTQKHPAMLFPAFRLQQELQKRVMGVAFWKRAAKKRARL----FADSTNLKEFMSHINETAFMELATFDTAADMDIGKHGEPPLRLQSMSDDGLSPAMGGAGGQPRRR 280          
BLAST of mRNA_C-australica_Contig_985.8.1 vs. uniprot
Match: A0A8J2SI54_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SI54_9STRA)

HSP 1 Score: 169 bits (427), Expect = 1.840e-42
Identity = 106/264 (40.15%), Postives = 163/264 (61.74%), Query Frame = 2
Query:   68 FKALKLGDNQVKALWDVFCEIDRDGSGQICTWELFEHIQLQQTKFSKRIFRIFDEDGSGEIDFREFVLSMWNYCTLSKAALVLFAFDXXXXXXXXXXXXSEIELMLKEIYGKEFCVSTHAQNIMRELHGGELGDK----DVNIEQFREFCRHHPACLYPAFMLQQTLQNMILGSRFWGTCGDKRVALSNGEYMTMTHLLEAHVNEQAFKELCETKDKNTGVAVQPLAES------DAAPILQASGTLANRRQLQEAVNENMTQI 829
            F++L L ++ V  L + F +ID+DGSG I  WE+ +H+ L++ +F+KR+F IFD DGS EIDF+EFV+++W YCTL +A L++FA  XXXXXXXXXXXX     MLKE+YG+ +  +  A N++R ++  EL  +    +V++E F  F + HPA L PAF +QQTL+  ILG  +W     +RV + NG  + +  L++AH++E AF    +  +K+     +  AE+      D    ++ +G +A RR  Q   N   ++I
Sbjct:   43 FESLGLKEDDVARLHEQFLKIDKDGSGTIELWEMLDHLDLKRNRFAKRVFAIFDVDGSNEIDFKEFVVALWQYCTLGRAQLIMFAXXXXXXXXXXXXXXXXXNTMLKELYGRRYAKNQIALNLLRHIN--ELNKRHDTEEVDVETFAAFVKSHPALLQPAFSMQQTLRERILGGAWWDRRSHERVKV-NGMNLRIHDLMKAHLHEGAFHAFMKAVEKSDAKEYKKDAEAHRDFSVDWHKTVKVTGMVAQRRAKQGIYNPQSSEI 303          
The following BLAST results are available for this feature:
BLAST of mRNA_C-australica_Contig_985.8.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FMZ9_ECTSI1.380e-7559.41Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A2R5GVS2_9STRA1.440e-5438.65Calcium-dependent protein kinase 1 n=1 Tax=Hondaea... [more]
A0A7S3XL51_HETAK1.410e-4750.00Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
A0A7S3HMR9_9STRA7.210e-4540.00Hypothetical protein n=1 Tax=Spumella elongata Tax... [more]
A0A7S2F8V1_9STRA1.920e-4461.90Hypothetical protein (Fragment) n=1 Tax=Florenciel... [more]
A0A7S4A064_9STRA2.140e-4441.92Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
A0A482T6P1_9ARCH9.010e-4439.09Uncharacterized protein n=1 Tax=archaeon TaxID=190... [more]
A0A4Q3A667_9BACT1.410e-4338.35Uncharacterized protein (Fragment) n=1 Tax=Verruco... [more]
A0A7S1CAR3_9STRA1.090e-4239.22Hypothetical protein n=1 Tax=Bicosoecida sp. CB-20... [more]
A0A8J2SI54_9STRA1.840e-4240.15Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-australica_Contig_985contigC-australica_Contig_985:13851..17204 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Chrysoparadoxa australica CS_1217 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D7FMZ9
PFAMsEF-hand_5
Model size1822
Max annot lvl2759|Eukaryota
Hectar predicted targeting categoryother localisation
Exons15
Evalue5.04e-71
EggNOG OGs2CXXS@1|root,2S4MR@2759|Eukaryota
DescriptionEF-hand, calcium binding motif
Cds size867
COG categoryS
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_C-australica_Contig_985.8.1prot_C-australica_Contig_985.8.1Chrysoparadoxa australica CS_1217polypeptideC-australica_Contig_985 14770..16576 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1682588852.54127-UTR-C-australica_Contig_985:13850..140691682588852.54127-UTR-C-australica_Contig_985:13850..14069Chrysoparadoxa australica CS_1217UTRC-australica_Contig_985 13851..14069 -
1682588852.552455-UTR-C-australica_Contig_985:14161..142851682588852.552455-UTR-C-australica_Contig_985:14161..14285Chrysoparadoxa australica CS_1217UTRC-australica_Contig_985 14162..14285 -
1682588852.5604186-UTR-C-australica_Contig_985:14349..144861682588852.5604186-UTR-C-australica_Contig_985:14349..14486Chrysoparadoxa australica CS_1217UTRC-australica_Contig_985 14350..14486 -
1682588852.5688019-UTR-C-australica_Contig_985:14568..147691682588852.5688019-UTR-C-australica_Contig_985:14568..14769Chrysoparadoxa australica CS_1217UTRC-australica_Contig_985 14569..14769 -
1682588852.6595335-UTR-C-australica_Contig_985:16576..165821682588852.6595335-UTR-C-australica_Contig_985:16576..16582Chrysoparadoxa australica CS_1217UTRC-australica_Contig_985 16577..16582 -
1682588852.669964-UTR-C-australica_Contig_985:16684..167781682588852.669964-UTR-C-australica_Contig_985:16684..16778Chrysoparadoxa australica CS_1217UTRC-australica_Contig_985 16685..16778 -
1682588852.680051-UTR-C-australica_Contig_985:16860..169071682588852.680051-UTR-C-australica_Contig_985:16860..16907Chrysoparadoxa australica CS_1217UTRC-australica_Contig_985 16861..16907 -
1682588852.6903744-UTR-C-australica_Contig_985:17001..170741682588852.6903744-UTR-C-australica_Contig_985:17001..17074Chrysoparadoxa australica CS_1217UTRC-australica_Contig_985 17002..17074 -
1682588852.7016597-UTR-C-australica_Contig_985:17150..172041682588852.7016597-UTR-C-australica_Contig_985:17150..17204Chrysoparadoxa australica CS_1217UTRC-australica_Contig_985 17151..17204 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1682588852.57771-CDS-C-australica_Contig_985:14769..148271682588852.57771-CDS-C-australica_Contig_985:14769..14827Chrysoparadoxa australica CS_1217CDSC-australica_Contig_985 14770..14827 -
1682588852.5872235-CDS-C-australica_Contig_985:14902..151531682588852.5872235-CDS-C-australica_Contig_985:14902..15153Chrysoparadoxa australica CS_1217CDSC-australica_Contig_985 14903..15153 -
1682588852.5970943-CDS-C-australica_Contig_985:15221..153801682588852.5970943-CDS-C-australica_Contig_985:15221..15380Chrysoparadoxa australica CS_1217CDSC-australica_Contig_985 15222..15380 -
1682588852.6081634-CDS-C-australica_Contig_985:15745..158211682588852.6081634-CDS-C-australica_Contig_985:15745..15821Chrysoparadoxa australica CS_1217CDSC-australica_Contig_985 15746..15821 -
1682588852.6190758-CDS-C-australica_Contig_985:15928..159921682588852.6190758-CDS-C-australica_Contig_985:15928..15992Chrysoparadoxa australica CS_1217CDSC-australica_Contig_985 15929..15992 -
1682588852.629266-CDS-C-australica_Contig_985:16124..161671682588852.629266-CDS-C-australica_Contig_985:16124..16167Chrysoparadoxa australica CS_1217CDSC-australica_Contig_985 16125..16167 -
1682588852.6395004-CDS-C-australica_Contig_985:16239..163261682588852.6395004-CDS-C-australica_Contig_985:16239..16326Chrysoparadoxa australica CS_1217CDSC-australica_Contig_985 16240..16326 -
1682588852.6496236-CDS-C-australica_Contig_985:16447..165761682588852.6496236-CDS-C-australica_Contig_985:16447..16576Chrysoparadoxa australica CS_1217CDSC-australica_Contig_985 16448..16576 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_C-australica_Contig_985.8.1

>prot_C-australica_Contig_985.8.1 ID=prot_C-australica_Contig_985.8.1|Name=mRNA_C-australica_Contig_985.8.1|organism=Chrysoparadoxa australica CS_1217|type=polypeptide|length=289bp
MWNYCTLSKAALVLFAFDLYDQDNSGAIDVSEIELMLKEIYGKEFCVSTH
AQNIMRELHGGELGDKDVNIEQFREFCRHHPACLYPAFMLQQTLQNMILG
SRFWGTCGDKRVALSNGEYMTMTHLLEAHVNEQAFKELCETKDKNTGVAV
QPLAESDAAPILQASGTLANRRQLQEAVNENMTQIKVLAAFQQGAEKAKE
VKKTKKGGQVSWGKVQRRVVAKDMTTAPATPSAPSASSTTKSKVAAAPGG
KRVQRVDNSQPKRANSTRLSTNLSSLLWPRVQLPSQSL*
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mRNA from alignment at C-australica_Contig_985:13851..17204-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_C-australica_Contig_985.8.1 ID=mRNA_C-australica_Contig_985.8.1|Name=mRNA_C-australica_Contig_985.8.1|organism=Chrysoparadoxa australica CS_1217|type=mRNA|length=3354bp|location=Sequence derived from alignment at C-australica_Contig_985:13851..17204- (Chrysoparadoxa australica CS_1217)
GGGAGGGGCGGTGAGCAGATCCAACATATACAACACAAGCATTGAGGCTC GCAAGTAAGCTTCACCCTTAGTCCTTCTGCTCTTTCCTCGAACAGTGCCC AAAATTTACTGGGCCATTCTCATCAACCAGGTACAAAAGTGAGTTCAAGG CTCTGAAGCTAGGTGATAACCAGGTGAAGGCATTGTGGGATGTATTTTGC GAGGTGAGCAAAGACCCACGAAGGGAGAGGGTGCAAGAAGTGACCGAGCT CCCCTACAGCTCGCCCTCATATGATGGCAACTCTCTCTCCCTTCAAGATT GACAGGGATGGTTCGGGCCAGATTTGCACGTGGGAATTATTTGAGTAAGT GGCGTGCGCTGGGGATACTTAAAATAGCTCTACGCGGAGAAACAGCTCCT CACTGATGTGTCCTCTCTTGAACTAGGCACATCCAGCTCCAGCAAACCAA GTTCTCCAAACGCATATTCCGTATCTTTGATGAAGACGGATCGGGGGAAA TAGACTTTCGAGAGTTTGTGGTGAGATTGACTGTAAATCACAGCAGGGTG TTAGGAGGGGAAGAAAAAAAAAGCTGATGCAACTCTCACGTACTCACTCC CCCACGTCCTCGCACACGACAGCTCAGCATGTGGAACTACTGCACCCTGA GCAAGGCAGCGTTGGTCCTATTTGCGTTCGACCTTTACGACCAAGACAAT AGTGGAGCAATAGACGTGTCTGAGATAGAGCTGATGTTAAAGGAAATCTA CGGCAAGGTACTACTGGTGTTTGCTTTTGCTTCCACCGCAGGCAGTTACA TGTCTGACTCATTGATGTCAATGATGAAACAGCACCAATCCTCTTTCTTG ATAATGCATCTTGATGAAATGTCTATAGGAGTTCTGCGTGAGTACTCATG CGCAGAACATCATGAGGGAATTGCATGGCGGGGAGCTAGGAGACAAGGAT GTAAACATCGAGCAGGCAAGAGCATCCCTCCACCATGTGCTTGATCCAAA GACCTAGCCTCCAACCCATCTGTTCATGCACTCCTAGTTTCGTGAGTTCT GCCGCCATCATCCTGCTTGTCTATACCCAGGTAAGTCAGCCCTTAGGGCT CCATAATAATAGTAAACCCCTTGACAACTGCATGGAAGTGCTTGGCTGGT TGGCCAGCGCAACATAGTAATAATAATCATCTACGTTTGTCCGTTGATTT TCTTCCACCCAGCTTTCATGCTGCAGCAAACACTGCAGAACATGATATTG GGTAGCAGGTTTTGGGGTACCTGCGGGTAAGATGATATCAACATAGCGTG CTTTTCCTTGAGCCGCCTCGCCTTGACTGCCCTTTCTTTCTTTTTCTTCA CATTGTTCTTCTTCATTTCTTCCCTCATGCAAGAGACAAGCGCGTCGCCC TCTCAAACGGCGAGTACATGACCATGACGCATTTGCTGGAGGCGCATGTG AATGAGCAGGTAGCCAGCTACTCATTGACTAGCAGACAAACATCTCTCTC TCTCTCTCTCTCTCTCTCTCTCTCACTGTTGCTCTCATGCTGACATGGCA TGTAATGGTCCCTATGCATATAATAGCTCCTGACCTTCTGCGCCTTACTT ATCGAGGCCACTCTCGCCACTCTGATGAGGATAGAAGAACTCTCACCCTG TTGTACCCATCTCTCAACTTGATGCTTCTCCATGTACCATGTGAGCATGT GAGGTAGTACCAAGCTAGGGTAGGACTAAGGCTGTGCAACCAACCCTTCA TCACTGGGAATAAAGCAATAACGGAAGTAATGACGTGGAGTTTGCATCTG ACCCAACAATCCTGCACGCTGCAGGCTTTCAAGGAGCTGTGTGAAACAAA GGATAAGAACACCGGAGTAGCTGTACAGCCCCTTGCTGAATCAGACGCGG CACCAATACTGCAGGCTTCAGGGACTCTAGCCAACAGGCGTCAGCTGCAA GAAGCTGTCAATGAGAACATGACCCAGATCAAGGTATGGCACGCGCACAT GAAGTGCAATTCATTAAATCATTGGTAACGAACTCTGCTCTTTTCTATAA GGTACTGGCTGCCTTCCAGCAAGGTGCTGAAAAGGCTAAAGAGGTCAAGA AGACAAAGAAGGGGGGTCAAGTATCATGGGGGAAAGTTCAGCGGCGCGTC GTTGCAAAGGATATGACGACTGCTCCAGCCACACCCAGTGCGCCATCAGC TTCATCAACCACCAAATCAAAAGTGGCAGCTGCTCCCGGCGGCAAGAGAG TGCAACGCGTTGATAATAGCCAGCCGAAGAGAGCGAACTCAACGAGGTTG TCTGCAAAGAAGGGAGTGACAGCCCTCAGATAGGAATTAATGACAGCCCT CAGACAGGAATTAACGAACCACATACCAACAAATCTCTCTTCCTTGCTGT GGCCCAGAGTGCAGCTGCCAAGTCAATCCCTTTAGCAGCCTCAATGTCAC TGTTTATGTGCACCCCACGATCAAGTCCTCCCCGACAGTGCAGCATTCTG CACGGAAGAATTTGTGGCCTCCTCCTCCCACCTGGCCTCCTCCTCCTCTA AAAAAGTTGAGCTGGCTGGATGCATGTCTTCTTATGAGAGGGCCACGCTG CTTGCTGGCAGGCACGTGAGCAATACCTTGTCATCTGGATGAAATCAGAA ATTACAGGGTTGGGACGGGGTCACAAGATGTGTTGGGGGGATAGGGGATT CGCAAGACATCCTGACCTTGCACCTGCTGCACAGTTTCTCAGCCGCTTCA GCATTGCATCTCGCGCATCTCTCCACAACTGGCACTGCTTTCTCATCGAT ATTGAGCCTTGCCTGTAGGCACCCTTGACATGGGGTAACCTCAGGCTGAC CTGATGTGCACTGGGGGGTGGGGGTGGAGTTGCTTAGGTGGTGAAAAGGA GACTCCATAGCAAGCACAGACTGACCAAATGCCCTATCAAGAAGTCCTTA TCCATCACCATAAGCTGCTTTATGCCATGACCCCCCTCCTCAAAAGCCTT TGTTGCATCCTTTCCCCCGCAGTCTTCGACTACCACAGCACCTGCAAGCG AGGAGGGGAGGTCGCCAATGGTAAATATCAAGAGCTGGCTGACCGGGCTA TTGACCAGCGATTAAAGAAGAAGGAGACCATACCTCCCGGGTGCCAAGGC AGAAGGGTGGTGACGTCGTACACAGCCTTCACACCACCCCATCCTGGGTG GCTGAGGGAAAGCCAAAGGCCTTGCTCCTCGCTCTGATGGGCCCGTAGTT CAGACTCAGTGATGCGGTTATCCATCTCATGTGAATCTCCTACCCTATCC GACTTCCTTATCCCTATCCGACTTCCTTATCCCTATCCCTGACGCCTATC GCCT
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Coding sequence (CDS) from alignment at C-australica_Contig_985:13851..17204-

>mRNA_C-australica_Contig_985.8.1 ID=mRNA_C-australica_Contig_985.8.1|Name=mRNA_C-australica_Contig_985.8.1|organism=Chrysoparadoxa australica CS_1217|type=CDS|length=867bp|location=Sequence derived from alignment at C-australica_Contig_985:13851..17204- (Chrysoparadoxa australica CS_1217)
ATGTGGAACTACTGCACCCTGAGCAAGGCAGCGTTGGTCCTATTTGCGTT
CGACCTTTACGACCAAGACAATAGTGGAGCAATAGACGTGTCTGAGATAG
AGCTGATGTTAAAGGAAATCTACGGCAAGGAGTTCTGCGTGAGTACTCAT
GCGCAGAACATCATGAGGGAATTGCATGGCGGGGAGCTAGGAGACAAGGA
TGTAAACATCGAGCAGTTTCGTGAGTTCTGCCGCCATCATCCTGCTTGTC
TATACCCAGCTTTCATGCTGCAGCAAACACTGCAGAACATGATATTGGGT
AGCAGGTTTTGGGGTACCTGCGGAGACAAGCGCGTCGCCCTCTCAAACGG
CGAGTACATGACCATGACGCATTTGCTGGAGGCGCATGTGAATGAGCAGG
CTTTCAAGGAGCTGTGTGAAACAAAGGATAAGAACACCGGAGTAGCTGTA
CAGCCCCTTGCTGAATCAGACGCGGCACCAATACTGCAGGCTTCAGGGAC
TCTAGCCAACAGGCGTCAGCTGCAAGAAGCTGTCAATGAGAACATGACCC
AGATCAAGGTACTGGCTGCCTTCCAGCAAGGTGCTGAAAAGGCTAAAGAG
GTCAAGAAGACAAAGAAGGGGGGTCAAGTATCATGGGGGAAAGTTCAGCG
GCGCGTCGTTGCAAAGGATATGACGACTGCTCCAGCCACACCCAGTGCGC
CATCAGCTTCATCAACCACCAAATCAAAAGTGGCAGCTGCTCCCGGCGGC
AAGAGAGTGCAACGCGTTGATAATAGCCAGCCGAAGAGAGCGAACTCAAC
GAGGTTGTCAACAAATCTCTCTTCCTTGCTGTGGCCCAGAGTGCAGCTGC
CAAGTCAATCCCTTTAG
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