mRNA_C-australica_Contig_985.5.5 (mRNA) Chrysoparadoxa australica CS_1217

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_C-australica_Contig_985.5.5
Unique NamemRNA_C-australica_Contig_985.5.5
TypemRNA
OrganismChrysoparadoxa australica CS_1217 (Chrysoparadoxa australica CS_1217)
Homology
BLAST of mRNA_C-australica_Contig_985.5.5 vs. uniprot
Match: A0A257CVE0_9BURK (Glycoside hydrolase n=2 Tax=Bacteria TaxID=2 RepID=A0A257CVE0_9BURK)

HSP 1 Score: 209 bits (533), Expect = 5.980e-61
Identity = 127/318 (39.94%), Postives = 181/318 (56.92%), Query Frame = 2
Query:   35 TAAAIAKEMGKGINLGMTLERKLNSRKEEGIHALLKTWKAAGIKNVRIPVTWFHETDNPTKPPTTLFESDDDGLL----PKVVSSLNALCYALEMGFYVILNTHHEEFLYKYYTGSAEQDEAFANLWTKIAERYKDADEDRLLFEVLNEPQGNFGDTMRDKKYARYVKANSEEGIRLTRQINKVGFEAIRQ---VSPNRVVLLAPNGRGNWSRARLIYPKATDLPGGGQCKRIMVTLHTYDPWGFCGPSARNRRKLTSAEVKDIMVPSIINGIKTWLTGMGGPAPAVHIGEYGVGRVGKKEKERDTGAVRDYYTYITR 967
            +A AI   M  G NLG T +  ++S +   I+ LL  ++AAG++++RIPVTW   T++          +D  GL+    P++V     + YAL  G YV+LNTHHE +LYK Y GS   D  F+ LW  IA ++ D  E RL+FEVLNEPQG FGD             ++   + LTR+IN+VG++AIR    ++  R++++  NG GN ++ RL+YP  TDLPGGG    + + +HTYDPWGFCG    N        + D ++ +++   +T    +G P   V+ GEYGVGR      ERDT  VR YY  +TR
Sbjct:   97 SAGAIVSAMAAGFNLGNTFDLGIHSTQPSDIYPLLDLYQAAGMRHIRIPVTWMEPTNDSVL-------ADATGLVNAAHPRLVQLKAVVDYALSKGLYVVLNTHHEHWLYKRYDGSQAMDSIFSKLWQGIAAQFADYPE-RLIFEVLNEPQGVFGDWNGGSS----PNPSNARALELTRRINQVGYDAIRASAGLNAKRLIMVGTNGMGNHTQLRLVYPAKTDLPGGGIDPHLAIQVHTYDPWGFCGQDGSNAAWPGERAISDPIL-AVLAHART----LGVP---VNYGEYGVGRQ-TNTAERDTDVVRGYYRLVTR 393          
BLAST of mRNA_C-australica_Contig_985.5.5 vs. uniprot
Match: A0A813JL32_POLGL (Hypothetical protein n=1 Tax=Polarella glacialis TaxID=89957 RepID=A0A813JL32_POLGL)

HSP 1 Score: 189 bits (479), Expect = 3.050e-54
Identity = 115/303 (37.95%), Postives = 164/303 (54.13%), Query Frame = 2
Query:   59 MGKGINLGMTLERK-LNSRKEEGIHALLKTWKAAGIKNVRIPVTWFHETDNPTKPPTTLFESDDDGLLPKVVSSLNALCYALEMGFYVILNTHHEEFLYKYYTGSAEQDEAFANLWTKIAERYKDADEDRLLFEVLNEPQGNFGDTMRDKKYARYVKANSEEGIRLTRQINKVGFEAIRQVSPNRVVLLAPNGRGNWSRARLIYPKATDLPGGGQCKRIMVTLHTYDPWGFCGPSARNRRKLTSAEVKDIMVPSIINGIKTWLTGMGGPAPAVHIGEYGVGRVGKKEKERDTGAVRDYYTYIT 964
            MG+GINLG T +   + +R +  I  ++  +   G +NVRIPVTW    +             +  LL + V+   A+ YAL+ GFYV+LNTHHE +L   Y  +   ++ FA LW  IA  + +A   RL+FE+LNEP G  G        + +    +E  I LTR +N VG+EA+R VS  R+V +APNG+G+ +    IYP A+ LPG G    + VT+H+YDPW FCG  +RN    +   +K  +     N    W    G P    H GEYG+GR  +   +RDT  VR+YY ++T
Sbjct:    1 MGRGINLGNTFDMTGMQNRSKSSIGRMIHLFWKKGFRNVRIPVTWGDSFN-------------ESSLLTQGVTE--AVKYALDKGFYVVLNTHHERWLKDAYNNTPYYNDRFAALWRGIATHFANAS-CRLVFEILNEPDGALGSFASPDAPSPF----NETQINLTRAVNLVGYEAVRSVSNTRIVFVAPNGQGSNALISTIYPNASYLPGAGSDPYLGVTVHSYDPWDFCGQDSRNSHFKSLFAMKSSLTERF-NTFSDWYYATGVPT---HWGEYGLGRRPQNNSDRDTDMVREYYKFVT 279          
BLAST of mRNA_C-australica_Contig_985.5.5 vs. uniprot
Match: A0A4Q3UEW8_9BACT (Glycoside hydrolase family 5 protein n=1 Tax=bacterium TaxID=1869227 RepID=A0A4Q3UEW8_9BACT)

HSP 1 Score: 189 bits (480), Expect = 7.370e-54
Identity = 118/322 (36.65%), Postives = 177/322 (54.97%), Query Frame = 2
Query:   35 TAAAIAKEMGKGINLGMTLERKLNSRKEEGIHALLKTWKAAGIKNVRIPVTWFHETDNPTKPPTTLFESDDDGLL----PKVVSSLNALCYALEMGFYVILNTHHEEFLYKYYTGSAEQDEAFANLWTKIAERYKDADEDRLLFEVLNEPQGNFGDTMRDKKYARYVKANSEEGIRLTRQINKVGFEAIRQV---SPNRVVLLAPNGRGNWSRARLIYPKATDLPGGGQCKRIMVTLHTYDPWGFCGPSARNRR----KLTSAEVKDIMVPSIINGIKTWLTGMGGPAPAVHIGEYGVGRVGKKEKERDTGAVRDYYTYITR 967
            TAA + ++M  G NLG T +  L+S     +  L+  + AAG+++VRIPVTW        +P      +D  G L    P+       + YAL  G YVI+N HHE +L  +Y GS   D AFA+LWT IA+++K+  + +L+FE+LNEP+  FGD      ++  VK    + +  TR++N++G+ A+RQ    +  R+V++  NG+GN S    +YP A  LPGGG+   +MVT+HTYDPW FCG    N +       +  ++D+   + + G+             V+ GE+GVGR  K + ERDT  VR YY  + R
Sbjct:   27 TAAQVNRQMATGFNLGNTFDLGLHSTAPADVKPLIDLYVAAGMRHVRIPVTWG-------EPIKGSLLADRTGKLNPNNPRFRQLGTVVDYALSKGLYVIVNAHHEHWLKDHYDGSPTYDRAFADLWTGIAQQFKNRSQ-KLVFEILNEPEKAFGD------WSGPVKPFDPQALSYTRKVNEIGWRAVRQAGGANRTRIVMVGTNGQGNQSMLDELYPTAAILPGGGKDPYLMVTVHTYDPWPFCGQDGSNAKWPGEAAIAKPIRDVAAHARMLGVP------------VNYGEFGVGRE-KDQSERDTDLVRGYYRTVRR 321          
BLAST of mRNA_C-australica_Contig_985.5.5 vs. uniprot
Match: A0A1V3RMX5_9FLAO (Uncharacterized protein n=2 Tax=Flavobacterium sp. A45 TaxID=1945862 RepID=A0A1V3RMX5_9FLAO)

HSP 1 Score: 196 bits (499), Expect = 8.120e-54
Identity = 119/316 (37.66%), Postives = 171/316 (54.11%), Query Frame = 2
Query:   35 TAAAIAKEMGKGINLGMTLERKLNSRKEEGIHALLKTWKAAGIKNVRIPVTWFHETDNPTKPPTTLFESDDDGLLPKVVSSLNALCYALEMGFYVILNTHHEEFLYKYYTGSAEQDEAFANLWTKIAERYKDADEDRLLFEVLNEPQGNFGDTMRDKKYARYVKANSEEGIRLTRQINKVGFEAIRQVSPN---RVVLLAPNGRGNWSRARLIYPKATDLPGGGQCKRIMVTLHTYDPWGFCGPSARNRRKLTSAEVK-DIMVPSIINGIKTWLTGMGGPAPAVHIGEYGVGRVGKKEKERDTGAVRDYYTYITRA 970
            TA  + K+MG G NLG   +    S        ++ ++ AAG+ N+RIP TW+           T    + D   P+ +  +  + YAL  G YV+LNTHHE +L   Y GSA  +  FANLWT IA  +K A   +L FEVLNEP+G  G      ++   V   ++ GI LTRQINKVG++AIR    N   R+V+++PNG+ N S+   +YP  + LPGGG  K + + +H+YDPW FCG +  N       ++K DI V +     +  L G+     A+H GE+GVGR+   + ER    V++YY    +A
Sbjct:   17 TAKEVVKDMGSGFNLGNVFDNGNKSTTFTSFKPIIDSYAAAGMTNIRIPTTWYDYVGGTR---LTDVNGNIDKTHPRFIELVKTVDYALSKGLYVVLNTHHEHWLKDNYNGSAYYNTIFANLWTSIANHFK-AYPSKLAFEVLNEPEGVMG------QWGEAVLPTAQSGILLTRQINKVGYDAIRATGGNNTTRIVMISPNGQANDSQIEEVYPNVSTLPGGGSDKYLAMHVHSYDPWNFCGQTGTNASYPGVTQIKNDITVCN--THAQNNLGGI-----AIHYGEFGVGRI-TNQAERSATVVKEYYQTFAKA 314          
BLAST of mRNA_C-australica_Contig_985.5.5 vs. uniprot
Match: A0A4P6YDL0_9FLAO (Glycoside hydrolase family 5 protein n=1 Tax=Flavobacterium nackdongense TaxID=2547394 RepID=A0A4P6YDL0_9FLAO)

HSP 1 Score: 192 bits (487), Expect = 8.350e-54
Identity = 113/312 (36.22%), Postives = 171/312 (54.81%), Query Frame = 2
Query:   35 TAAAIAKEMGKGINLGMTLERKLNSRKEEGIHALLKTWKAAGIKNVRIPVTWFHETDNPTKPPTTLFESDDDGLLPKVVSSLNALCYALEMGFYVILNTHHEEFLYKYYTGSAEQDEAFANLWTKIAERYKDADEDRLLFEVLNEPQGNFGDTMRDKKYARYVKANSEEGIRLTRQINKVGFEAIRQVS---PNRVVLLAPNGRGNWSRARLIYPKATDLPGGGQCKRIMVTLHTYDPWGFCGPSARNRRKLTSAEVKDIMVPSIINGIKTWLTGMGGPAPAVHIGEYGVGRVGKKEKERDTGAVRDYYTYI 961
            TA  I K MG G NLG T +   N      I +++  + AAG+K+VRIPV+W       T   T   + D +    + +    A+ YA+  G YV++NTHHE +L  YY GSA  +  F+ LW+ IA  +KD   ++L+F++LNEP+G  G    +  ++ + +  S   + LTRQINKVG++AIR  +     R++++ PNG+GN      +YP   DLPGGG  K +++ +HTYDPW FCG +  +     SA      + + IN +    T +G P   ++ GE+GVGR       R+T  V +YY  +
Sbjct:  130 TAIDITKAMGPGFNLGNTFDNGANPTSITSIKSIIDIYTAAGMKHVRIPVSWMQSVSGSTLANTGTGKVDFNH--SRFLELKAAIDYAISKGLYVVINTHHEHWLKDYYDGSATYNTKFSTLWSDIATYFKDYS-NKLIFDILNEPEGTMGQWGAEAGFS-FPQPTSTTALNLTRQINKVGYDAIRATAGGNATRIIMVEPNGQGNQGMIEEVYPTKADLPGGGTDKYLVIQVHTYDPWAFCGETGAD-----SAYPGATSIAAAINKVAVHSTLLGVP---INYGEFGVGRT---SAARNTSVVYEYYRTV 426          
BLAST of mRNA_C-australica_Contig_985.5.5 vs. uniprot
Match: UPI0019A94C7F (Glycoside hydrolase family 5 protein n=1 Tax=Flavobacterium sp. TaxID=239 RepID=UPI0019A94C7F)

HSP 1 Score: 188 bits (477), Expect = 2.400e-52
Identity = 114/312 (36.54%), Postives = 171/312 (54.81%), Query Frame = 2
Query:   35 TAAAIAKEMGKGINLGMTLERKLNSRKEEGIHALLKTWKAAGIKNVRIPVTWFHETDNPTKPPTTLFESDDDGLLPKVVSSLNALCYALEMGFYVILNTHHEEFLYKYYTGSAEQDEAFANLWTKIAERYKDADEDRLLFEVLNEPQGNFGDTMRDKKYARYVKANSEEGIRLTRQINKVGFEAIRQV---SPNRVVLLAPNGRGNWSRARLIYPKATDLPGGGQCKRIMVTLHTYDPWGFCGPSARNRRKLTSAEVKDIMVPSIINGIKTWLTGMGGPAPAVHIGEYGVGRVGKKEKERDTGAVRDYYTYI 961
            TAA I K MG G NLG T +   N      I +++  + AAG+K+VRIPV+W       T   TT  + D      + +    A+ YA+  G YV++N+HHE +L  YY GSA  +  F+ LWT IA  YK    ++L+F++LNEP+G  G    +  ++  +  N+   I  TRQINKVG++AIR     +  R++++ PNG+GN      +YP   +LPG G  K +++ +HTYDPWGFCG +  +     +A      + S IN + T    +G P   ++ GE+GVGR+      R+T  V +YY  +
Sbjct:  128 TAADITKAMGPGFNLGNTFDNGGNPTSITSIKSIIDIYAAAGMKHVRIPVSWIQSVSGSTLANTTTGKVDFTH--SRFLELKAAIDYAISKGLYVVINSHHEHWLKDYYDGSATFNNKFSALWTDIATYYKSYS-NKLIFDILNEPEGTMGQWGAEAGFSFPLPTNAT-AINFTRQINKVGYDAIRATGGGNTTRIIMIEPNGQGNQGMIEEVYPTKAELPGLGNDKYLVIQVHTYDPWGFCGETGSD-----AAYPGATSIASAINKVATHSALIGVP---INYGEFGVGRL---SAARNTSVVYEYYRTV 424          
BLAST of mRNA_C-australica_Contig_985.5.5 vs. uniprot
Match: A0A3D1G8F2_9BACT (Glycoside hydrolase n=1 Tax=Balneolaceae bacterium TaxID=2053516 RepID=A0A3D1G8F2_9BACT)

HSP 1 Score: 185 bits (469), Expect = 3.870e-52
Identity = 119/307 (38.76%), Postives = 163/307 (53.09%), Query Frame = 2
Query:   56 EMGKGINLGMTLERKLNSRKEEGIHALLKTWKAAGIKNVRIPVTWFHETDNPTKPPTTLFESDDDGLL----PKVVSSLNALCYALEMGFYVILNTHHEEFLYKYYTGSAEQDEAFANLWTKIAERYKDADEDRLLFEVLNEPQGNFGDTMRDKKYARYVKANSEEGIRLTRQINKVGFEAIRQVSPN---RVVLLAPNGRGNWSRARLIYPKATDLPGGGQCKRIMVTLHTYDPWGFCGPSARNRRKLTSAEVKDIMVPSIINGIKTWLTGMGGPAPA-VHIGEYGVGRVGKKEKERDTGAVRDYY 952
            +MG G+N+G T +   +         ++ T+  AG+ ++RIPVTW                +D+ G +    P+     N + YAL  G YV +NTHHE +L+  Y GS E D  F+NLWT+IA  +KD  + RL+FEVLNEPQGNFG+      +   V      GI LTRQIN VG+ AIR    N   R++ +  NG GN S+   +YP   +LPG G    +M+ +HTYDPW FCG + RN      A        SI+  IK  +TG        ++ GE+GVGR   K  ERDT  VR++Y
Sbjct:   44 QMGSGVNIGNTFDLDSHDTSPALNKLIIDTYIDAGMDHIRIPVTWMDGYSGDHL-------ADEAGNINFSHPRFKDLENVVDYALSKGLYVTINTHHEHWLFDSYDGSDEIDAVFSNLWTQIATHFKDYPQ-RLIFEVLNEPQGNFGE------WGGSVVPGDARGIALTRQINNVGYHAIRATGGNNEQRIIQIGVNGMGNHSQLDDVYPTIAELPGKGSDPYLMIQVHTYDPWTFCGQTGRNSEYPGEA--------SIVQSIKK-VTGHASQLNVPLNFGEWGVGRDDNKP-ERDTDLVRNHY 326          
BLAST of mRNA_C-australica_Contig_985.5.5 vs. uniprot
Match: UPI0019BF7A6A (Cellulase family glycosylhydrolase n=1 Tax=Flavobacterium sp. TaxID=239 RepID=UPI0019BF7A6A)

HSP 1 Score: 188 bits (477), Expect = 7.080e-52
Identity = 122/318 (38.36%), Postives = 168/318 (52.83%), Query Frame = 2
Query:   35 TAAAIAKEMGKGINLGMTLERKLNSRKEEGIHALLKTWKAAGIKNVRIPVTW---FHETDNPTKPPTTLFESDDDGLLPKVVSSLNALCYALEM-GFYVILNTHHEEFLYKYYTGSAEQDEAFANLWTKIAERYKDADEDRLLFEVLNEPQGNFGDTMRDKKYARYVKANSEEGIRLTRQINKVGFEAIRQVS-PN--RVVLLAPNGRGNWSRARLIYPKATDLPGGGQCKRIMVTLHTYDPWGFCGPSARNRRKLTSAEVKDIMVPSIINGIKTWLTGMGGPAPAVHIGEYGVGRVGKKEKERDTGAVRDYYTYITR 967
            TAA +A  MG G NLG T +   +S     I+ ++  +  AG +N+RIP TW   F      +   T  F        P+ +     + YAL     YVILNTHHE +L +YY G+A  +  F NLWT I+  +K+   +RL+FEVLNEP+G  GD   D      V  NS   I LT+Q+N+VG++AIR    PN  R+V+++PN + N S+   +Y     LPGGG    + + LHTY+PW FCG    N                IING+   +T     A AVH+GE+GVGRV     ER++  VR+YY  + R
Sbjct:   51 TAAMVA--MGTGFNLGNTFDLAQHSTVPSTIYPIIDLYYNAGFRNIRIPTTWMDGFSGNHLASATGTVNFNH------PRFIQLKAVIDYALSKPNMYVILNTHHEHWLKRYYNGTATYNTPFTNLWTGISNHFKNYP-NRLVFEVLNEPEGALGDW--DNDNGTTVSPNSTTAITLTKQLNQVGYDAIRATGGPNTTRIVMVSPNAQANTSQFEEVYNVKESLPGGGNDDYLAIHLHTYNPWNFCGQKGSNSNYGGRT--------GIINGVSAIVTHAAKLAVAVHVGEFGVGRVDSSALERNSWQVREYYRTLRR 349          
BLAST of mRNA_C-australica_Contig_985.5.5 vs. uniprot
Match: A0A1V3RMW6_9FLAO (Cellulase domain-containing protein n=1 Tax=Flavobacterium sp. A45 TaxID=1945862 RepID=A0A1V3RMW6_9FLAO)

HSP 1 Score: 186 bits (472), Expect = 1.270e-51
Identity = 115/314 (36.62%), Postives = 166/314 (52.87%), Query Frame = 2
Query:   35 TAAAIAKEMGKGINLGMTLERKLNSRKEEGIHALLKTWKAAGIKNVRIPVTWFHETDNPTKPPTTLFESDDDGLLPKVVSSLNALCYALEMGFYVILNTHHEEFLYKYYTGSAEQDEAFANLWTKIAERYKDADEDRLLFEVLNEPQGNFGDTMRDKKYARYVKANSEEGIRLTRQINKVGFEAIRQV---SPNRVVLLAPNGRGNWSRARLIYPKATDLPGGGQCKRIMVTLHTYDPWGFCGP----SARNRRKLTSAEVKDIMVPSIINGIKTWLTGMGGPAPAVHIGEYGVGRVGKKEKERDTGAVRDYYT 955
            TAA I K MG G NLG T +  +N+     I +++  + AAG+K+VRIPV+W       T   T+  + D     P+ +    A+ YAL    YV+LNTHHE +L  YY GSA  +  F+ +WT IA  +K     +L+F+VLNEP+G  G    +  +  +    S   I LTRQINKVG++AIR     +  R++++ PNG+GN      +YP   +LPG G  K + + +HTYDPW FCG     SA       +A V  +   S + G+            A++ GE+GVGR       R+T  V +YY+
Sbjct:  128 TAADIIKAMGTGFNLGNTFDNGINATSITSIKSIIDLYAAAGMKHVRIPVSWAQSVSGNTLANTSTGKVDFTN--PRFLELKAAIDYALSKDLYVVLNTHHEHWLKDYYDGSATYNNKFSAIWTDIATYFKSYSS-KLIFDVLNEPEGTMGQWGAEAGFT-FPLPTSATAISLTRQINKVGYDAIRATGGGNTTRIIMVEPNGQGNQGMIEEVYPSKAELPGLGNDKYLAIQVHTYDPWAFCGQTGADSAYPGATSIAAAVTKVATHSALIGV------------AINYGEFGVGRT---SAARNTSVVYEYYS 422          
BLAST of mRNA_C-australica_Contig_985.5.5 vs. uniprot
Match: A0A835Z601_9STRA (Glycoside hydrolase superfamily n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z601_9STRA)

HSP 1 Score: 182 bits (461), Expect = 2.430e-51
Identity = 118/301 (39.20%), Postives = 166/301 (55.15%), Query Frame = 2
Query:   56 EMGKGINLGMTLERKLNSRKEEGIHALLKTWKAAGIKNVRIPVTWFHETDNPTKPPTTLFESDDDGLLPKVVSSLNALCYALEMGFYVILNTHHEEFLYKYYTGSAEQDEAFANLWTKIAERYKDADEDRLLFEVLNEPQGNFGDTMRDKKYARYVKANSEEGIRLTRQINKVGFEAIRQVSPNRVVLLAPNGRGN-WSRARLIYPKATDLPGGGQCKRIMVTLHTYDPWGFCGPSARNRRKLTSAEVKDIMVPSIINGIKTWLTGMGG-PAPAVHIGEYGVGRVGKKEKERDTGAVRDYY 952
            ++G G+NLG T E K+NSR+   +   L   +  G  +VRIPVTW+    +  +    LF    D          N++ YA+++G  VILNTHHE+++   Y GS   +  F  LWT+IA RYK   +++L+FEVLNEP G FG    D+       A+S E I LTR IN VG EAIR V   R+VL+ PN  GN WS  + +YP    LPG G  K + V  HTYD + FC  +  N    +  E++   +   +  IK W   +GG    A+H+GE+GVGR+   +++RD   V+ YY
Sbjct:   12 DIGIGVNLGQTFESKMNSRQPAQVRPWLLGIRQKGFGHVRIPVTWYPGNSHACQLNDALFMQCLD----------NSIEYAVKIGLAVILNTHHEDWIIDGYDGSDLYNVKFKKLWTQIATRYKRYPQNKLIFEVLNEPSGKFGKP--DES------ADSSECIALTRLINLVGLEAIRAVDSTRIVLVQPNAMGNVWSVPK-VYPSKDTLPGSGADKYLGVQFHTYDHYKFCLQAGSNEYYKSLNELR-ADIQKRVEMIKKWHVTIGGNDVVALHLGEFGVGRL--DQRQRDADIVKAYY 290          
The following BLAST results are available for this feature:
BLAST of mRNA_C-australica_Contig_985.5.5 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A257CVE0_9BURK5.980e-6139.94Glycoside hydrolase n=2 Tax=Bacteria TaxID=2 RepID... [more]
A0A813JL32_POLGL3.050e-5437.95Hypothetical protein n=1 Tax=Polarella glacialis T... [more]
A0A4Q3UEW8_9BACT7.370e-5436.65Glycoside hydrolase family 5 protein n=1 Tax=bacte... [more]
A0A1V3RMX5_9FLAO8.120e-5437.66Uncharacterized protein n=2 Tax=Flavobacterium sp.... [more]
A0A4P6YDL0_9FLAO8.350e-5436.22Glycoside hydrolase family 5 protein n=1 Tax=Flavo... [more]
UPI0019A94C7F2.400e-5236.54Glycoside hydrolase family 5 protein n=1 Tax=Flavo... [more]
A0A3D1G8F2_9BACT3.870e-5238.76Glycoside hydrolase n=1 Tax=Balneolaceae bacterium... [more]
UPI0019BF7A6A7.080e-5238.36Cellulase family glycosylhydrolase n=1 Tax=Flavoba... [more]
A0A1V3RMW6_9FLAO1.270e-5136.62Cellulase domain-containing protein n=1 Tax=Flavob... [more]
A0A835Z601_9STRA2.430e-5139.20Glycoside hydrolase superfamily n=1 Tax=Tribonema ... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-australica_Contig_985contigC-australica_Contig_985:10936..13081 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Chrysoparadoxa australica CS_1217 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog1168289.AJKI01000036_gene3408
PFAMsBACON,Cellulase
Model size972
Max annot lvl976|Bacteroidetes
KEGG koko:K01179
KEGG ReactionR06200,R11307,R11308
KEGG Pathwayko00500,ko01100,map00500,map01100
Hectar predicted targeting categoryother localisation
Exons11
Evalue9.76e-47
EggNOG OGsCOG2730@1|root,COG2730@2|Bacteria,4NK8X@976|Bacteroidetes
EC3.2.1.4
DescriptionBelongs to the glycosyl hydrolase 5 (cellulase A) family
Cds size960
COG categoryG
CAZyGH5,GH9
BRITEko00000,ko00001,ko01000
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_C-australica_Contig_985.5.5prot_C-australica_Contig_985.5.5Chrysoparadoxa australica CS_1217polypeptideC-australica_Contig_985 10946..13081 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1682588852.3258252-UTR-C-australica_Contig_985:10935..109451682588852.3258252-UTR-C-australica_Contig_985:10935..10945Chrysoparadoxa australica CS_1217UTRC-australica_Contig_985 10936..10945 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1682588852.3425107-CDS-C-australica_Contig_985:10945..110771682588852.3425107-CDS-C-australica_Contig_985:10945..11077Chrysoparadoxa australica CS_1217CDSC-australica_Contig_985 10946..11077 +
1682588852.3513684-CDS-C-australica_Contig_985:11175..113291682588852.3513684-CDS-C-australica_Contig_985:11175..11329Chrysoparadoxa australica CS_1217CDSC-australica_Contig_985 11176..11329 +
1682588852.3596861-CDS-C-australica_Contig_985:11415..114881682588852.3596861-CDS-C-australica_Contig_985:11415..11488Chrysoparadoxa australica CS_1217CDSC-australica_Contig_985 11416..11488 +
1682588852.370065-CDS-C-australica_Contig_985:11573..116311682588852.370065-CDS-C-australica_Contig_985:11573..11631Chrysoparadoxa australica CS_1217CDSC-australica_Contig_985 11574..11631 +
1682588852.3787365-CDS-C-australica_Contig_985:11687..117551682588852.3787365-CDS-C-australica_Contig_985:11687..11755Chrysoparadoxa australica CS_1217CDSC-australica_Contig_985 11688..11755 +
1682588852.3879492-CDS-C-australica_Contig_985:11842..120271682588852.3879492-CDS-C-australica_Contig_985:11842..12027Chrysoparadoxa australica CS_1217CDSC-australica_Contig_985 11843..12027 +
1682588852.3980873-CDS-C-australica_Contig_985:12109..121501682588852.3980873-CDS-C-australica_Contig_985:12109..12150Chrysoparadoxa australica CS_1217CDSC-australica_Contig_985 12110..12150 +
1682588852.4065156-CDS-C-australica_Contig_985:12329..124351682588852.4065156-CDS-C-australica_Contig_985:12329..12435Chrysoparadoxa australica CS_1217CDSC-australica_Contig_985 12330..12435 +
1682588852.414859-CDS-C-australica_Contig_985:12531..125521682588852.414859-CDS-C-australica_Contig_985:12531..12552Chrysoparadoxa australica CS_1217CDSC-australica_Contig_985 12532..12552 +
1682588852.4231641-CDS-C-australica_Contig_985:12751..128111682588852.4231641-CDS-C-australica_Contig_985:12751..12811Chrysoparadoxa australica CS_1217CDSC-australica_Contig_985 12752..12811 +
1682588852.431898-CDS-C-australica_Contig_985:13019..130811682588852.431898-CDS-C-australica_Contig_985:13019..13081Chrysoparadoxa australica CS_1217CDSC-australica_Contig_985 13020..13081 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_C-australica_Contig_985.5.5

>prot_C-australica_Contig_985.5.5 ID=prot_C-australica_Contig_985.5.5|Name=mRNA_C-australica_Contig_985.5.5|organism=Chrysoparadoxa australica CS_1217|type=polypeptide|length=320bp
MKSASSLGTAAAIAKEMGKGINLGMTLERKLNSRKEEGIHALLKTWKAAG
IKNVRIPVTWFHETDNPTKPPTTLFESDDDGLLPKVVSSLNALCYALEMG
FYVILNTHHEEFLYKYYTGSAEQDEAFANLWTKIAERYKDADEDRLLFEV
LNEPQGNFGDTMRDKKYARYVKANSEEGIRLTRQINKVGFEAIRQVSPNR
VVLLAPNGRGNWSRARLIYPKATDLPGGGQCKRIMVTLHTYDPWGFCGPS
ARNRRKLTSAEVKDIMVPSIINGIKTWLTGMGGPAPAVHIGEYGVGRVGK
KEKERDTGAVRDYYTYITRA
back to top

mRNA from alignment at C-australica_Contig_985:10936..13081+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_C-australica_Contig_985.5.5 ID=mRNA_C-australica_Contig_985.5.5|Name=mRNA_C-australica_Contig_985.5.5|organism=Chrysoparadoxa australica CS_1217|type=mRNA|length=2146bp|location=Sequence derived from alignment at C-australica_Contig_985:10936..13081+ (Chrysoparadoxa australica CS_1217)
ACCCGATGCCATGAAGAGTGCTTCGTCCCTCGGGACTGCGGCAGCCATTG CCAAAGAGATGGGGAAGGGCATTAACTTGGGTATGACTCTCGAGAGGAAG CTAAATTCCAGGAAGGAGGAGGGCATCCATGCATTGCTTAAGGTAGTAGT ACTTACAATAGATGCCTCCTTGACCTGGCCTGAGGCCTAAACTTCTTGTT GTGATTGCTCCTTAATCCCACCCCACTCCCCCCATGCTAGACATGGAAAG CGGCTGGCATAAAGAACGTGCGAATCCCCGTGACTTGGTTTCATGAGACC GACAATCCGACAAAACCACCAACCACATTGTTTGAGAGTGATGATGACGG GCTGCTGCCAAAGGTAGTAAGTAGCCTCAATGCTTTATGTTATGGTAGTA AGTAGCCTCATGCTTTATGTTATTTCCCTTGCAGTGACTGACAAGACTGG GATTGCAGGTAGATTACACAGTACGCAAAGCTCTAGAAATGGGTTTTTAT GTCATCTTGAACACCCACCACGAGGAGTTTTTGTACAAGTACTACACCGG AAGGTCAGTGGAAAGGGTTGAAAAAGAAGTAGCCCTGCACCAGCGGGTTG GTTGCCTACCAAACATGAGCTCTCCCCCCCCCCTGCAGCGCCGAGCAAGA TGAAGCCTTTGCCAACCTCTGGACCAAGATTGCAGAGCGATACAAGGTGG GTGCACTCATCACCCTCCCTCTCCTTCCTCTCAACCTTCCACTCAACCCC AGGATGCTGATGAGGACAGGCTTCTGTTTGAGGTGCTCAATGAGCCGCAA GGGAACTTTGGAGACACAATGTGATGTTGCTTTTTTTCTTTTGATCTGTC CTCCAAGTGCCTACTCATTGCTTACTGCTCAACAAAGCGTCACGTATCGC CTTGCAGGCGAGATAAGAAGTACGCACGATATGTAAAGGCCAATAGCGAG GAAGGCATCAGGCTGACTCGGCAAATTAACAAGGTTGGCTTTGAAGCTAT TCGACAGGTATCACCTAACCGTGTTGTGCTGCTGGCTCCAAATGGCCGTG GTAACTGGTCCAGGGCAAGGCTGATTTACCCCAAAGCCACAGGTAAGTAA AGCGGAGGAGAGTCTAGTGAGAGCAACTCCTTTTCCTAAATCTCGATTGT TTTTGCTGCTGCTAAATCCCACAGATCTGCCCGGTGGAGGCCAGTGCAAA CGCATCATGGTCACTGTACGTGTGTCGTCTCACAAACTCACCCAATAACC AACGCAACCTCAGCTGAGTTTTCACTGCTACCCCTGTCCTTTTGAGAAGT ATTATTAATCCAACCAGTGCTGCATCCTGCCTCCCTTTCCTCCAACAAAC TGCATCAACACGCCCATTGATCCTGCAGCCTTACTGCTTTACAGCTCCAT ACCTATGACCCGTGGGGCTTCTGCGGACCCAGCGCCAGGAACAGGCGAAA GCTGACATCAGCAGAGGTCAAGGATATCATGGTCCCTTCAATCATTAATG GTACCTTTACATCATTGTAATCAGTGGCTATTACTGTCGGGAGTATTGCC TCTGCCTAATGTGACTCTAATTTTGGACCATTCATTTTCACCACAGGCAT CAAAACTTGGCTGACAGGTAGGGGCTCTCTCGGTAGTACCTGCTTGCATT GGTTTCTATTGCATTGGCTTAGAGGACGGTCGATTGATTTCCATAAGCCA AAAGAGAATTACAGACCAACAGGGTAGCTCTCATTCTCTCGTGTATTCCA AAAGTCAGTCTCAAGTCCCCAGCATGCAGAAAACCATTGTCACTCACATC GTACCAACATGATTAGGCATGGGCGGCCCTGCACCAGCTGTCCACATAGG AGAGTATGGAGTGGGGAGAGTAGGCAGTGAGTTGCATCACTTTCATCTTA TCACCTCTCCATCGTATCCCAGCCTGAGGCACTGGGGCCTCCCAGCCCTG AGCTCAACCAGAGAGACATGCTTTGATGCTTTATGCCGCTCTGCTTCTTG ATTCTCCGCCCTTCCACATCCCCCCTCAGTAACTGAGCAACTGACTGCTG CACCACTCAACTCTCACTCCCTCACGTCCCGCAGAGAAAGAGAAAGAGCG AGATACTGGCGCTGTTCGTGACTACTACACCTACATAACTAGAGCT
back to top

Coding sequence (CDS) from alignment at C-australica_Contig_985:10936..13081+

>mRNA_C-australica_Contig_985.5.5 ID=mRNA_C-australica_Contig_985.5.5|Name=mRNA_C-australica_Contig_985.5.5|organism=Chrysoparadoxa australica CS_1217|type=CDS|length=960bp|location=Sequence derived from alignment at C-australica_Contig_985:10936..13081+ (Chrysoparadoxa australica CS_1217)
ATGAAGAGTGCTTCGTCCCTCGGGACTGCGGCAGCCATTGCCAAAGAGAT
GGGGAAGGGCATTAACTTGGGTATGACTCTCGAGAGGAAGCTAAATTCCA
GGAAGGAGGAGGGCATCCATGCATTGCTTAAGACATGGAAAGCGGCTGGC
ATAAAGAACGTGCGAATCCCCGTGACTTGGTTTCATGAGACCGACAATCC
GACAAAACCACCAACCACATTGTTTGAGAGTGATGATGACGGGCTGCTGC
CAAAGGTAGTAAGTAGCCTCAATGCTTTATGTTATGCTCTAGAAATGGGT
TTTTATGTCATCTTGAACACCCACCACGAGGAGTTTTTGTACAAGTACTA
CACCGGAAGCGCCGAGCAAGATGAAGCCTTTGCCAACCTCTGGACCAAGA
TTGCAGAGCGATACAAGGATGCTGATGAGGACAGGCTTCTGTTTGAGGTG
CTCAATGAGCCGCAAGGGAACTTTGGAGACACAATGCGAGATAAGAAGTA
CGCACGATATGTAAAGGCCAATAGCGAGGAAGGCATCAGGCTGACTCGGC
AAATTAACAAGGTTGGCTTTGAAGCTATTCGACAGGTATCACCTAACCGT
GTTGTGCTGCTGGCTCCAAATGGCCGTGGTAACTGGTCCAGGGCAAGGCT
GATTTACCCCAAAGCCACAGATCTGCCCGGTGGAGGCCAGTGCAAACGCA
TCATGGTCACTCTCCATACCTATGACCCGTGGGGCTTCTGCGGACCCAGC
GCCAGGAACAGGCGAAAGCTGACATCAGCAGAGGTCAAGGATATCATGGT
CCCTTCAATCATTAATGGCATCAAAACTTGGCTGACAGGCATGGGCGGCC
CTGCACCAGCTGTCCACATAGGAGAGTATGGAGTGGGGAGAGTAGGCAAG
AAAGAGAAAGAGCGAGATACTGGCGCTGTTCGTGACTACTACACCTACAT
AACTAGAGCT
back to top