mRNA_C-australica_Contig_985.2.2 (mRNA) Chrysoparadoxa australica CS_1217
You are viewing an mRNA, more information available on the corresponding polypeptide page
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Overview
Homology
BLAST of mRNA_C-australica_Contig_985.2.2 vs. uniprot
Match: D7FQA0_ECTSI (PPM-type phosphatase domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FQA0_ECTSI) HSP 1 Score: 136 bits (342), Expect = 5.150e-31 Identity = 93/288 (32.29%), Postives = 133/288 (46.18%), Query Frame = -1 Query: 3622 PLSSFFVVSDGHAGNGVSRMVRDELPKAFALSESFNSLDMPVADSLAGALVGGLKELETKIWDQAARGDPDSSGACLVAVALRGSHLCVANLGDCQALLLPPNGAPVELTKIHRSNAREEKARIREAGAKVTEGRISGILEPSRSLGDRYQAMLARRNQHLPSHLATPSEVWPGPKVYDCHGDRR*GPCPHDPATAVQLPLFTLHPFRCLGFRAEDKGKAHGSKA*HLAPKT*NQPVINHLTQTPRFLKVVEVVTENQDPQEAVDKLTRMAVENGSTDDVTAIIVHLS 4485
PL+ F V DGH G+G S+ V + L S + S+D P ++LA A+ G+ +E D + R D+SG C VA+RGS LC AN+GDCQA+L+ GA V L++ HR+ +EKARIR G KV +GR+ G+LEPSR +GD Y WPG + + P V+ +T + A D V + +TQ V E + + +DP++ +L A E GS DD+T +I L
Sbjct: 101 PLACLFGVFDGHGGDGASKFVANHLHHLIGRSAFYESIDYPADEALASAVEEGVASVEQAYTDWSKRSG-DTSGCCACVVAIRGSVLCAANVGDCQAILITDKGAIVSLSRPHRAVDLDEKARIRSNGGKVVQGRVMGVLEPSRVIGD-YDI----------------KRTWPGCVIAE-------------PYVLVRSLPYTRGQEPSILVVASDG-------------------VWDFMTQASVSKLVTEAIRKQKDPRQVSKELVAAAREAGSGDDITVVIAKLG 338
BLAST of mRNA_C-australica_Contig_985.2.2 vs. uniprot
Match: D7G5Y3_ECTSI (Heat shock protein 40 like protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5Y3_ECTSI) HSP 1 Score: 137 bits (346), Expect = 1.000e-30 Identity = 131/376 (34.84%), Postives = 168/376 (44.68%), Query Frame = 1 Query: 2395 PPIC--SMGESLALYYCKALRYAGRAVDFEQALNSVNGKW-PWVQQLMEKYRSVQAKKHKADRAYSQGNFRAAANAYTQALKVDKEDVEMMAKLYCNRAAAYMSLQDYHAAVEDCDAALRLKPSYHKAHLRLARCYKALQLWDDALEVIVGHSQWWILRLLSDFSCSNRSASKCVAVELPDKNSSTVIQEYEPYLSSIGAGGSDRAAVEMERDFCL----------RMKEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDF----DGDFFSQFRPGG----RGXXXXXSSGNSGQKVAARDAPKCHYTTMSISETATAVQIKKAYHRLALKHHPDKCQHPDA-AERFKEIKDAYEVLGDSKARKAYDASRR 3456
P +C +M SL YCKALR AG+ F++AL + G PW + + + V KK +A +AY+ +R A Y++A+ VD +D A L+ NRAAA M+L A++DC ALRLKP+Y K LR AR +K L WD A I++YE Y +S+G S E D C R +E XXXXXXXXXXXXX D D F F G RG S HYTT+ I TAT ++KKAY +LAL+HHPDK Q +A A FK++ AYEVL D K R+ YD S R
Sbjct: 89 PELCIAAMHASLQEGYCKALRNAGQTDKFKEALAAATGTGVPWAMSMTRRRQDVMDKKERAGKAYASNRYRLAHELYSEAICVDPQDYYTNALLFANRAAALMNLARNKDALKDCIEALRLKPNYPKVLLRKARLHKRLSQWDLA------------------------------------------IKDYETYRNSVGVLHSTWEEAASELDQCRLSQRRANDEERRREAEARAYERGDYFYGSXXXXXXXXXXXXXHGLFDDXXXXXDDHDPFKFFSGGSSWSRRGRGTGGRSNYDSPPPPGPVPTSGHYTTLGIKSTATTAEVKKAYRKLALQHHPDKNQGNEASANIFKDVTAAYEVLSDEKERRTYDVSLR 422
BLAST of mRNA_C-australica_Contig_985.2.2 vs. uniprot
Match: A0A7S2W7S6_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2W7S6_9STRA) HSP 1 Score: 138 bits (348), Expect = 4.440e-29 Identity = 163/578 (28.20%), Postives = 248/578 (42.91%), Query Frame = 1 Query: 1912 NRAAALMMEGHYQEAALDCRAAAAEDSTFTKALTRQARALLKAGRLAEAQE-------VVSNALA--ASHGQQEGRAELREECVKARRDIMSVRCALDNARFRMSRSQHGEASRECKAALELSPALEVAHMLWAQAQLQMKRYAEVVDGSEAAARTMAKSE--------------------------ESSGDPSARPPICSM--GESLALYYCKALRYAGRAVDFEQALNSVNGKWP---WVQQLMEKYRSVQAKKHKADRAYSQGNFRAAANAYTQALKVDKEDVEMMAKLYCNRAAAYMSLQDYHAAVEDCDAALRLKPSYHKAHLRLARCYKALQLWDDALEVIVGHSQWWILRLLSDFSCSNRSASKCVAVELPDKNSSTVIQEYEPYLSSIGAGGSDRAAVEMERDFCLRMKEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDFDGDFFSQFRPGGRGXXXXXSSGNSGQKVAARD---------------------APKCHYTTMSISETATAVQIKKAYHRLALKHHPDKCQHPDAAERFKEIKDAYEVLGDSKARKAYDASRRQR 3462
NR+A M + A DC+A K R A ALLK+G L ++ E + + L+ H + E A+L + V+ + +++ ++ + +QH +A + A+ ++P + + + A +++R+ VV+ R + ++ SS P +C++ A Y ALRY+ D E L+ + + W + K ++ K AD A+ + F AA YT+AL++D + + LYCNRAAA +L Y AV DC AL+L+PSY KA LR AR LQL+ +A++ D+ +R A E P I+E E L A + R A E R KE XXXXXXXXXXX + + RPG R S +G + A++D A HYT + +SE ATA ++KKA+H+LALK+HPDK + P AAE+FKEI A E+L D ++R+ YD R +
Sbjct: 677 NRSACYTMLSNLSAAMQDCKAVLKLSPENLKIRNRLAGALLKSGSLTQSNESYEQVRSIATRKLSRRVGHAEAEALAKLDRDAVEGIEQVFALKGLMELSYAAQKVAQHEKALVNAEKAITIAPFDHKMYTVKSLALFKLRRFGLVVEECHRCYRALVQANPSTLTRAKNFAHKKGLKVKGLDTVKGSSSQAEGVSPLLCALVLPTKAAQIYLPALRYSEIFPDTEPVLSVLQSQRDLREWCADELRKIDGLRQSKESADGAFRRQKFHAAVALYTEALEIDGCADALNSVLYCNRAAAQTALHKYDLAVADCTRALKLRPSYPKAKLRRARAQVQLQLYAEAVKDF------------EDYLRESRHA------EDP-----ATIREVENELQV--AVSARRRATERRRQEAQAHKEKFSSDFFSESGPYRHRSSSAHAXXXXXXXXXXXWSREYN-----RPGRRASETSGSQKGTGYQSASQDGXXXXXXXXXRSRSRSVESSSAGPTHYTLLGVSENATAAEVKKAFHKLALKYHPDKNKDPGAAEKFKEIVHAKEILSDERSRRKYDEEVRNK 1224
BLAST of mRNA_C-australica_Contig_985.2.2 vs. uniprot
Match: A0A5D6XEK0_9STRA (J domain-containing protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XEK0_9STRA) HSP 1 Score: 112 bits (281), Expect = 8.470e-23 Identity = 115/368 (31.25%), Postives = 164/368 (44.57%), Query Frame = 1 Query: 2368 ESSGDPSARPPICSMGESLALYYCKALRYAGRAVDFEQALNSVNGKWPW---VQQLMEKYRSVQAKKHKADRAYSQGNFRAAANAYTQALKVDKEDVEMMAKLYCNRAAAYMSLQDYHAAVEDCDAALRLKPSYHKAHLRLARCYKALQLWDDALEVIVGHSQWWILRLLSDFSCSNRSASKCVAVELPDKNSSTVIQEYEPYLSSIGAGGSDRAAVEMERDFCLRMKEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDFDGDFFSQFRPGGRGXXXXXSSGNS------GQKVAARDAPKCHYTTMSISETATAVQIKKAYHRLALKHHPDKCQHPDAAERFKEIKDAYEVLGDSKARKAYD 3444
E+S SA + +G + L++ AL Y G+A + + ++ P V QL K ++Q KH A+ A+ + +F AA Y +AL +D E E A L CNRAAAYM ++ + +A+ DCD AL+ KP Y +A LR ARCY AL AL+ DF R + A P + + V +E ++I A R A XXXXX DFD DF + XXXXX G+ R + HY + + A++ ++KKAY +LAL+HHPDK + AE FK++ AY VL D+ R+ YD
Sbjct: 33 EASAKTSAEQEVRIVGVDMGLHWASALHYQGKAEEAVALVTALEHAAPCSASVIQLKRKLLTMQDLKHTANAAFKRHDFERAALLYAKALAIDPEHDEYCAVLLCNRAAAYMGMERFASALLDCDDALKRKPQYPRALLRRARCYAALGKLSPALK---------------DFDRFLRDQRREAA---PAASLADVERERADVKAAIDAEKQRRQAXXXXXXXXXXXXXXXXXXHRYAWEAG---------------------DFDDDFRRSYGSXXXXXXXXXXXXXXXXXXXLGKPKPLRQ--RTHYQVLGVHHRASSDELKKAYRKLALQHHPDKAKSARDAELFKDMTAAYAVLSDAGERRKYD 359
BLAST of mRNA_C-australica_Contig_985.2.2 vs. uniprot
Match: A0A836CMW2_9STRA (Phosphatase 2C-like domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CMW2_9STRA) HSP 1 Score: 108 bits (271), Expect = 2.030e-22 Identity = 95/288 (32.99%), Postives = 130/288 (45.14%), Query Frame = -1 Query: 3622 SFFVVSDGHAGNGVSRMVRDELPKAFALSESFNSLDMPVADSLAGALVGGLKELETKIWDQAARGDPDSSGACLVAVALRGSHLCVANLGDCQALL-LPPNGAPVELTKIHRSNAREEKARIREAGAKVTEGRISGILEPSRSLGDRYQAMLARRNQHLPSHLATPSEVWPGPKVYDCHGDRR*GPCPHDPA--TAVQLPLFTLHPFRCLGFRAEDKGKAHGSKA*HLAPKT*NQPVINHLTQTPRFLKVVEVVTENQDPQEAVDKLTRMAVENGSTDDVTAIIVHLS 4476
S F V DGH G+ S+ + D L + ++S+ + + L GALV LK E K D A + + D SGAC+V H+CVAN+GDC A+L LP + V+L+ HRS EE RI AG V R G+LEPSRS+GD L H V P + + P P PA A + P PF L F ++ + PV+ LT+ + LKV +P +L R A+ +G+ DD TAI+VH
Sbjct: 7 SCFAVFDGHGGSRCSQWLADNLEEDLRCADSWRQEGLTLPKRLKGALVQALKRAEYKYLDLAFK-ESDHSGACVVVGLYCEGHVCVANVGDCLAVLYLPGADSHVDLSVAHRSRQPEEARRIEAAGGLVINNRAFGVLEPSRSIGDL----------DLKRHCR--GAVTADPYIREVVI-----PPPQQPAEGAAKKKPALQEAPF--LLFASDGLWDVVAA------------PVVVDLTK--KSLKVWRKKPAKSNPAR---QLVRAAIRHGTMDDTTAIVVHFD 257
BLAST of mRNA_C-australica_Contig_985.2.2 vs. uniprot
Match: B5YNH1_THAPS (Predicted protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B5YNH1_THAPS) HSP 1 Score: 111 bits (277), Expect = 1.130e-20 Identity = 96/365 (26.30%), Postives = 154/365 (42.19%), Query Frame = 1 Query: 2509 PWVQQLMEKYRSVQAKKHKADRAYSQGNFRAAANAYTQALKVDKEDVE--------------MMAKLYCNRAAAYMSLQDYHAAVEDCDAALRLKPSYHKAHLRLARCYKALQLWDDALEVIVGHSQWWILRLLSDFSCSNRSASKCVAV-------ELPDKNSSTVIQEYEPYLSSIGAGGSDRAAVEMERDFCLRMKEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDFDG-------DFF-------------SQFRPGGRGXXXXXSSGNSGQK------VAARDAPKCHYTTMSISETATAVQIKKAYHRLALKHHPDKCQHPDAAERFKEIKDAYEVLGDSKARKAYDASRRQR 3462
PW+ +K R + K K D + G++ AA+ Y L +D + E + A L+CNRAA M+L+ Y AV++C A+LR+ Y KA LR RC+ ++ + +A + + ++ + L+ D S +++ A ++ S QE S+ S+ A + ++ + D G D F S+ P G G ++ S K A++D CHY + I TA++ +IKKAYH++ALK+HPDK AA+ F+ +K AYEVLG+ + R +YDA RR+R
Sbjct: 966 PWLANERDKLRRTMSWKEKGDTLFRNGDYERAASKYAACLGIDGDTSEYSQNPLENEDAGGRLHAVLHCNRAACLMALKKYREAVKECTASLRIHTHYMKAMLRRGRCFARIRQYQEA---VAEYERY--IGLVDDAKRSPQNSINSNAACTFDRPADITQSEYSKAKQELADVKKSMEQAASNAQAQQTKQTEQQQWYNDNFRKAAATNAAQRRKEAPAGPNKNTAYARKQQWDASGANTRRAWDQFGGTSPKKHGQKKSSKDAPSGGGTSGPSANRGSQNKQQQAPPAASKDVVHCHYAVLEIQMTASSAEIKKAYHKMALKYHPDKNSEEGAADIFRRVKLAYEVLGNDQTRISYDAERRRR 1325
BLAST of mRNA_C-australica_Contig_985.2.2 vs. uniprot
Match: A0A7S1ZQD8_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S1ZQD8_9STRA) HSP 1 Score: 108 bits (269), Expect = 7.870e-20 Identity = 109/411 (26.52%), Postives = 170/411 (41.36%), Query Frame = 1 Query: 2413 GESLALYYCKALRYAGRAVDFEQA---LNSVNGKWPWVQQLMEKYRSVQAKKHKADRAYSQGNFRAAANAYTQALKVDKE---DVEMM--------------AKLYCNRAAAYMSLQDYHAAVEDCDAALRLKPSYHKAHLRLARCYKALQLWDDALEVIVGHSQWWILRLLSDF-----SCSNRSASKCV---AVELPDKNSSTVIQEYEPYLSSI-GAGGSDRAAVEMERDFCLRMKEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDFDGDFF---SQFRPGGRGXXXXXS-------------------SGNSGQKVAAR------------DAPKCHYTTMSISETATAVQIKKAYHRLALKHHPDKCQHPDAAERFKEIKDAYEVLGDSKARKAYDASRR 3456
G SL L+ +++ R V A LN ++PW+++ +K R K + D + G++ AA Y L +D E D+++ A L+CNRAA M+++ Y A ++C AALR+ Y KA LR RCY L+ ++A + Q W+ L+ + S + + + C AV++ D+ V E E ++ A + RA E + E D F S +P G+ S S N+ QK DA CHY + + + A V+IKK+YHR+ALK+HPDK + +A+++F+ I+ AYE+L D ARK YDA +R
Sbjct: 596 GASLELF----VKHYNRMVASSSAPALLNKGQIRFPWLEKERDKLRRTMTGKERGDSFFRNGDYERAAAKYASCLTIDGEGDPDIKLTGDPSEIPNAGGRLHAVLHCNRAACLMAIRRYREASKECTAALRIHTQYMKAMLRRGRCYARLEQHEEA----IAEYQRWV-HLVEEAKNKANSATANTTTTCFFDRAVDVSDEEFVRVKNELEDVKKAMRDAAMNARAEAEFRAERQKWYNENFRRTTSSTTPQKGSNKHDAYSRRQQWYENQDDSTRRWDSFNGASPKKPSGKSYGRSKSYTESARSTFSEKFRRSSSSSKNNYQKDGGNQKNQQPIGSPGSDASICHYAVLQVKKNAKPVEIKKSYHRMALKYHPDKNKDVNASDKFRRIQLAYEMLSDPSARKRYDAEQR 997
BLAST of mRNA_C-australica_Contig_985.2.2 vs. uniprot
Match: A0A7S2PUW1_9STRA (Hypothetical protein n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2PUW1_9STRA) HSP 1 Score: 105 bits (262), Expect = 6.300e-19 Identity = 96/353 (27.20%), Postives = 145/353 (41.08%), Query Frame = 1 Query: 2512 WVQQLMEKYRSVQAKKHKADRAYSQGNFRAAANAYTQALKVDKE----------DVE-----MMAKLYCNRAAAYMSLQDYHAAVEDCDAALRLKPSYHKAHLRLARCYKALQLWDDALEVIVGHSQWWILRLLSDFSCSNRSASKCV---AVELPDKNSSTVIQEYEPYLSSI---------GAGGSDRAAVEMERDFCLRMKEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDFDGDFFSQF------RPGGRGXXXXXSSGNSGQKVAARDA---PKCHYTTMSISETATAVQIKKAYHRLALKHHPDKCQHPDAAERFKEIKDAYEVLGDSKARKAYDASRRQR 3462
W+ +K R + K K D + + ++ AA Y L +D + D++ + A L+CNRAA M+L+ Y AV++C AALR+ Y KA LR RC+ ++ + +A+ + Q S S N +A+ C ++ D S QE S+ S + A + + K F G + P G N+ Q+ + P CHY + +S TA++ IKK+YH++ALK+HPDK Q AA+ F+ +K AYEVLGD R AYDA RR+R
Sbjct: 938 WLSNERDKLRKTMSWKEKGDGLFRKASYEKAAEKYGSCLTIDSDTTAAYDAQNSDIDDAGGRLHAVLHCNRAACLMALKKYREAVKECTAALRIHTHYMKAMLRRGRCFARIRQYQEAVAEYERYIQLVDEAKRSPESGININAA-CTFDRPADITDAEYSKAKQELLDVKKSMRQSSNVNANAQANSKKQAGQQQWYNSQFAKAAASNAAKRKDTAGRSNAYTRKQQWDAGANQRRYDPFGGSSPKKAGSRKKDAPAGDSRTNRARHNNNNQQPQQPNVVKNPDCHYEVLGLSATASSADIKKSYHKMALKYHPDKNQEEGAADIFRRVKLAYEVLGDDSTRIAYDAERRRR 1289
BLAST of mRNA_C-australica_Contig_985.2.2 vs. uniprot
Match: A0A7S3QCC0_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3QCC0_9STRA) HSP 1 Score: 100 bits (248), Expect = 1.120e-17 Identity = 106/435 (24.37%), Postives = 166/435 (38.16%), Query Frame = 1 Query: 2401 ICSMGESLALYYCKALRYAGRAVDFEQALNSVNG-------------------KWPWVQQLMEKYRSVQAKKHKADRAYSQGNFRAAANAYTQALKVDKEDVE---------------MMAKLYCNRAAAYMSLQDYHAAVEDCDAALRLKPSYHKAHLRLARCYKALQLWDDALEVIVGHSQWWILRLLSDFSCSNRSASKCVAVELPDKNSSTVIQEYEPYLSSIGAGGSDRAAVEMERDFCLRMKEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDFDGDFFSQFRP----GGRGXXXXXSSGNSGQKVAAR----------------------------------------DAPKCHYTTMSISETATAVQIKKAYHRLALKHHPDKCQHPDAAERFKEIKDAYEVLGDSKARKAYDASR-RQRAY 3468
I + ++A Y + LR R D E AL S+ K+ W E R +K D Y +G+++ AA Y L VD +D++ + A L+CNRAA M++ Y A ++C AAL+++ +Y KA LR ARCY L+ + ++L + +W L + + +R+ + C L D+ S +Y+ + +ER +K D F+ P RG S+ +K + D+ KCHY +++++ AT IKKAYH+LALK+HPDK AA+ F+++K AY+ L D K R+ YD R RQ +Y
Sbjct: 177 ILRLPSNVAKLYVRGLRLEERYEDAEYALKSLESLMDHFKSAMLSPSHKNHKKKYHWCAAEHEMIRKTIKEKTLGDDCYREGDYQQAAGLYAAVLMVDCKDMDSKYRHPWEMETAGGRLHAVLHCNRAACLMAMNKYEDAAKECTAALKIQAAYMKAMLRRARCYARLKRFAESLSE---YDRWASLVKEAKSNPKHRNVNTC----LFDRASDVSDADYKKAM--------------IERTEASNLKHLAEEKARQEAEEARRRASSTFNRERSYTQNRSTGSRPWDSFNGSGPKTNQSARGYNRSSSAYERTKKSKSTKHPDYSKQSNSNRFKXXXXXXXXXXXXXXXXXXXXPSPSSDSVKCHYKVLNVTQDATQNSIKKAYHKLALKYHPDKNSSDAAADIFRKVKVAYDTLKDEKTRRQYDVERLRQFSY 590
BLAST of mRNA_C-australica_Contig_985.2.2 vs. uniprot
Match: A0A7S3LK47_9STRA (Hypothetical protein n=1 Tax=Aplanochytrium stocchinoi TaxID=215587 RepID=A0A7S3LK47_9STRA) HSP 1 Score: 96.7 bits (239), Expect = 2.560e-16 Identity = 85/309 (27.51%), Postives = 128/309 (41.42%), Query Frame = 1 Query: 2536 YRSVQAKKHKADRAYSQGNFRAAANAYTQALKVDKEDVEMMAKLYCNRAAAYMSLQDYHAAVEDCDAALRLKPSYHKAHLRLARCYKALQLWDDALEVIV-GHSQWWILRLLSDFSCSNRSASKCVAVELPDKNSSTVIQEYEPYLSSIGAGGSDRAAVEMERDFCLRMKEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDFD-GDFFSQFRPGGRGXXXXXSSGNSGQKVAARDAPKCHYTTMSISETATAVQIKKAYHRLALKHHPDKCQHPDAAERFKEIKDAYEVLGDSKARKAYDASRR 3456
Y + +K A+ ++ G + A + YT+ALK+ + + CNRAAAYM++ DY AA+EDC AA+R + Y KA +R AR AL D AL+ + +L + + +C +E E Y + D G + R SSG S + + HY + +S T ++ I+KAYH+LALK+HPDK +P+A E+FK I++AYE+L DS R++YDA R
Sbjct: 608 YMKLAEQKRVANESFRAGKYNEAIHYYTEALKIHLNHKYYNSIMRCNRAAAYMAIGDYTAALEDCSAAIRYRSWYVKARIRRARARVALGKLDGALQDFKRAYELEKSPEVLDELNQVEEKVKRC--------------REEEAYRXXXXXXXXXXXXXXXXXXXXXXXGNYNNHYARYYQTPEDGGYENYFSQKSYRDQQQSKWNRDEGKNYKYTRSS--------SSGYSQKPTPTQKKEINHYEVLGVSVTESSAAIRKAYHKLALKYHPDK--NPNAEEQFKSIQEAYEILKDSSKRRSYDAKIR 892 The following BLAST results are available for this feature:
BLAST of mRNA_C-australica_Contig_985.2.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-australica_Contig_985.2.2 >prot_C-australica_Contig_985.2.2 ID=prot_C-australica_Contig_985.2.2|Name=mRNA_C-australica_Contig_985.2.2|organism=Chrysoparadoxa australica CS_1217|type=polypeptide|length=1129bp MPSSSTDDIMQGVTEMVAELEVGLEYGPEMESAPPLDSDLESLVSDLHLEback to top mRNA from alignment at C-australica_Contig_985:1347..7914+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-australica_Contig_985.2.2 ID=mRNA_C-australica_Contig_985.2.2|Name=mRNA_C-australica_Contig_985.2.2|organism=Chrysoparadoxa australica CS_1217|type=mRNA|length=6568bp|location=Sequence derived from alignment at C-australica_Contig_985:1347..7914+ (Chrysoparadoxa australica CS_1217)back to top Coding sequence (CDS) from alignment at C-australica_Contig_985:1347..7914+ >mRNA_C-australica_Contig_985.2.2 ID=mRNA_C-australica_Contig_985.2.2|Name=mRNA_C-australica_Contig_985.2.2|organism=Chrysoparadoxa australica CS_1217|type=CDS|length=3387bp|location=Sequence derived from alignment at C-australica_Contig_985:1347..7914+ (Chrysoparadoxa australica CS_1217)back to top |