mRNA_C-australica_Contig_9847.1.1 (mRNA) Chrysoparadoxa australica CS_1217

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_C-australica_Contig_9847.1.1
Unique NamemRNA_C-australica_Contig_9847.1.1
TypemRNA
OrganismChrysoparadoxa australica CS_1217 (Chrysoparadoxa australica CS_1217)
Homology
BLAST of mRNA_C-australica_Contig_9847.1.1 vs. uniprot
Match: A0A0N7LZS8_9RHOB (Deoxyribose-phosphate aldolase n=5 Tax=Rhodobacterales TaxID=204455 RepID=A0A0N7LZS8_9RHOB)

HSP 1 Score: 462 bits (1190), Expect = 1.300e-162
Identity = 237/262 (90.46%), Postives = 245/262 (93.51%), Query Frame = 1
Query:   13 TVHTDKAAHLPQVHEARNPGMALDMDWVRAARANRSAIERRAGTLPGRRSVKKDYQAAWLARAVSCIDLTTLAGDDTPGRVARLCAKARQPVRADLLEALGLEGLTVGAVCVYHDMIEPAVKALEGSGIPVAAVSTGFPAGLSPFHLRVAEIEESVKAGAAEIDIVISRRLVLRGDWQGLYEEMCAFRAACGEAHVKAILATGELGTLQNVARASLVCMMAGADFIKTSTGKESVNATLPVSLVMMRAIREYHDRTGYRVGY 798
            T  T +  HLPQVH+ARNPGMALDMDWV  ARANRSAIERRA +LPGRRSVKKDYQAAWLARAVSCIDLTTLAGDDT GRVARLCAKARQPVRAD+L+ALGL  LTVGAVCVYHDMI PAV ALEGSGIPVAAVSTGFPAGLSPFHLRVAEIEESVKAGA EIDIVISRR VL GDWQGLY+EM AFRAACGEAHVKAILATGELGTLQNVARASLVCMMAGADFIKTSTGKESVNATLPVSLVM+RAIREYH+RTGYRVGY
Sbjct:    3 TATTIQTPHLPQVHDARNPGMALDMDWVMRARANRSAIERRAASLPGRRSVKKDYQAAWLARAVSCIDLTTLAGDDTAGRVARLCAKARQPVRADILDALGLPDLTVGAVCVYHDMIAPAVGALEGSGIPVAAVSTGFPAGLSPFHLRVAEIEESVKAGAQEIDIVISRRKVLTGDWQGLYDEMKAFRAACGEAHVKAILATGELGTLQNVARASLVCMMAGADFIKTSTGKESVNATLPVSLVMIRAIREYHERTGYRVGY 264          
BLAST of mRNA_C-australica_Contig_9847.1.1 vs. uniprot
Match: A0A238KD27_9RHOB (Deoxyribose-phosphate aldolase n=1 Tax=Maliponia aquimaris TaxID=1673631 RepID=A0A238KD27_9RHOB)

HSP 1 Score: 462 bits (1189), Expect = 1.920e-162
Identity = 234/255 (91.76%), Postives = 243/255 (95.29%), Query Frame = 1
Query:   34 AHLPQVHEARNPGMALDMDWVRAARANRSAIERRAGTLPGRRSVKKDYQAAWLARAVSCIDLTTLAGDDTPGRVARLCAKARQPVRADLLEALGLEGLTVGAVCVYHDMIEPAVKALEGSGIPVAAVSTGFPAGLSPFHLRVAEIEESVKAGAAEIDIVISRRLVLRGDWQGLYEEMCAFRAACGEAHVKAILATGELGTLQNVARASLVCMMAGADFIKTSTGKESVNATLPVSLVMMRAIREYHDRTGYRVGY 798
            AHLPQ+HEARNPG ALDMDWVRAARANRSAIERR  TLPGRRSVKK+YQAAWLARA+SCIDLTTLAGDDTPGRVARLCAKARQPVR DLLEALGLEGLTVGAVCVYHDMI PAV AL GSGIPVAAVSTGFPAGLSPF LRVAEIEESV+AGA EIDIVISRRLVL GDWQGLY+EM +FRAACGEAH+KAILATGELGTLQNVARASLVCMMAGADFIKTSTGKESVNATLPVSLVM+RAIREYH R+GYRVGY
Sbjct:   11 AHLPQLHEARNPGKALDMDWVRAARANRSAIERRCATLPGRRSVKKEYQAAWLARAISCIDLTTLAGDDTPGRVARLCAKARQPVRPDLLEALGLEGLTVGAVCVYHDMIAPAVAALRGSGIPVAAVSTGFPAGLSPFPLRVAEIEESVRAGAQEIDIVISRRLVLTGDWQGLYDEMRSFRAACGEAHIKAILATGELGTLQNVARASLVCMMAGADFIKTSTGKESVNATLPVSLVMVRAIREYHQRSGYRVGY 265          
BLAST of mRNA_C-australica_Contig_9847.1.1 vs. uniprot
Match: A0A6F8Q1Z5_9RHOB (Deoxyribose-phosphate aldolase n=8 Tax=Roseobacteraceae TaxID=2854170 RepID=A0A6F8Q1Z5_9RHOB)

HSP 1 Score: 459 bits (1180), Expect = 4.660e-161
Identity = 235/266 (88.35%), Postives = 245/266 (92.11%), Query Frame = 1
Query:    1 MTTGTVHTDKAAHLPQVHEARNPGMALDMDWVRAARANRSAIERRAGTLPGRRSVKKDYQAAWLARAVSCIDLTTLAGDDTPGRVARLCAKARQPVRADLLEALGLEGLTVGAVCVYHDMIEPAVKALEGSGIPVAAVSTGFPAGLSPFHLRVAEIEESVKAGAAEIDIVISRRLVLRGDWQGLYEEMCAFRAACGEAHVKAILATGELGTLQNVARASLVCMMAGADFIKTSTGKESVNATLPVSLVMMRAIREYHDRTGYRVGY 798
            MT  T   DK A LPQ+ +ARNPGM LDMDWVRAARANRSAIERRA TLPGRRSVKK++QAAWLARA+SCIDLTTLAGDDTPGRVARLCAKAR PVRADLLEALGLEGLTVGAVCVYHDMI PA+ AL+GSGIPVAAVSTGFPAGLSPF LRVAEIEESV+AGA EIDIVISRR VL GDWQGLY+EM  FRAACGEAHVKAILATGELGTLQNVARASLVCMMAGADFIKTSTGKESVNATLPVSLVMMRAIR YH+ TGYRVGY
Sbjct:    1 MTPVTAKGDKTAQLPQLQDARNPGMLLDMDWVRAARANRSAIERRAATLPGRRSVKKEFQAAWLARAISCIDLTTLAGDDTPGRVARLCAKARHPVRADLLEALGLEGLTVGAVCVYHDMIGPALAALQGSGIPVAAVSTGFPAGLSPFRLRVAEIEESVQAGAQEIDIVISRRKVLTGDWQGLYDEMRTFRAACGEAHVKAILATGELGTLQNVARASLVCMMAGADFIKTSTGKESVNATLPVSLVMMRAIRAYHEATGYRVGY 266          
BLAST of mRNA_C-australica_Contig_9847.1.1 vs. uniprot
Match: UPI000EF4993D (deoxyribose-phosphate aldolase n=1 Tax=Tropicibacter sp. LMIT003 TaxID=2267683 RepID=UPI000EF4993D)

HSP 1 Score: 456 bits (1172), Expect = 7.430e-160
Identity = 232/254 (91.34%), Postives = 240/254 (94.49%), Query Frame = 1
Query:   37 HLPQVHEARNPGMALDMDWVRAARANRSAIERRAGTLPGRRSVKKDYQAAWLARAVSCIDLTTLAGDDTPGRVARLCAKARQPVRADLLEALGLEGLTVGAVCVYHDMIEPAVKALEGSGIPVAAVSTGFPAGLSPFHLRVAEIEESVKAGAAEIDIVISRRLVLRGDWQGLYEEMCAFRAACGEAHVKAILATGELGTLQNVARASLVCMMAGADFIKTSTGKESVNATLPVSLVMMRAIREYHDRTGYRVGY 798
            HLPQV +ARNPGM LDMDWV  ARANRSAIERRA TLPGRRSVKKDYQAAWLARA+SCIDLTTLAGDDTPGRVARLCAKARQPVRADLL+ALGLEGLTVGAVCVYHDMI PAV ALEGSGIPVAAVSTGFPAGLSP HLRVAEIEESVKAGA EIDIVISRR VL GDWQGLY+EM AFRAACG AHVKAILATGELGTLQNVA+ASLVCMMAGADFIKTSTGKESVNATLPVSLVM+RAIREYH++TG RVGY
Sbjct:   12 HLPQVQDARNPGMELDMDWVMRARANRSAIERRAATLPGRRSVKKDYQAAWLARAISCIDLTTLAGDDTPGRVARLCAKARQPVRADLLQALGLEGLTVGAVCVYHDMIAPAVAALEGSGIPVAAVSTGFPAGLSPMHLRVAEIEESVKAGAEEIDIVISRRKVLSGDWQGLYDEMRAFRAACGPAHVKAILATGELGTLQNVAKASLVCMMAGADFIKTSTGKESVNATLPVSLVMIRAIREYHEKTGCRVGY 265          
BLAST of mRNA_C-australica_Contig_9847.1.1 vs. uniprot
Match: A0A7W6GT98_9RHOB (Deoxyribose-phosphate aldolase n=1 Tax=Sagittula marina TaxID=943940 RepID=A0A7W6GT98_9RHOB)

HSP 1 Score: 453 bits (1166), Expect = 6.530e-159
Identity = 233/256 (91.02%), Postives = 240/256 (93.75%), Query Frame = 1
Query:   31 AAHLPQVHEARNPGMALDMDWVRAARANRSAIERRAGTLPGRRSVKKDYQAAWLARAVSCIDLTTLAGDDTPGRVARLCAKARQPVRADLLEALGLEGLTVGAVCVYHDMIEPAVKALEGSGIPVAAVSTGFPAGLSPFHLRVAEIEESVKAGAAEIDIVISRRLVLRGDWQGLYEEMCAFRAACGEAHVKAILATGELGTLQNVARASLVCMMAGADFIKTSTGKESVNATLPVSLVMMRAIREYHDRTGYRVGY 798
            AA LPQVH ARNPGMALDMDWV +ARANRSAIERRA TLPGRRSVKKD+QAAW+ARA+SCIDLTTLAGDDT GRVARLCAKARQPVRADLLE LGL  LTVGAVCVYHDMI PAVKAL+GSGIPVAAVSTGFPAGLSP HLR+AEIEESVKAGA EIDIVISRR VL GDWQGLY+EM AFRAACGEAHVKAILATGELGTLQNVARASLVCMMAGADFIKTSTGKESVNATLPVSLVMMRAIREYH RTG RVGY
Sbjct:   12 AAQLPQVHGARNPGMALDMDWVLSARANRSAIERRAATLPGRRSVKKDHQAAWMARAISCIDLTTLAGDDTAGRVARLCAKARQPVRADLLEVLGLPDLTVGAVCVYHDMIAPAVKALDGSGIPVAAVSTGFPAGLSPMHLRIAEIEESVKAGAEEIDIVISRRKVLTGDWQGLYDEMKAFRAACGEAHVKAILATGELGTLQNVARASLVCMMAGADFIKTSTGKESVNATLPVSLVMMRAIREYHLRTGVRVGY 267          
BLAST of mRNA_C-australica_Contig_9847.1.1 vs. uniprot
Match: A0A2D4USV2_9RHOB (Deoxyribose-phosphate aldolase n=2 Tax=Rhodobacterales TaxID=204455 RepID=A0A2D4USV2_9RHOB)

HSP 1 Score: 447 bits (1151), Expect = 1.300e-156
Identity = 231/265 (87.17%), Postives = 239/265 (90.19%), Query Frame = 1
Query:    4 TTGTVHTDKAAHLPQVHEARNPGMALDMDWVRAARANRSAIERRAGTLPGRRSVKKDYQAAWLARAVSCIDLTTLAGDDTPGRVARLCAKARQPVRADLLEALGLEGLTVGAVCVYHDMIEPAVKALEGSGIPVAAVSTGFPAGLSPFHLRVAEIEESVKAGAAEIDIVISRRLVLRGDWQGLYEEMCAFRAACGEAHVKAILATGELGTLQNVARASLVCMMAGADFIKTSTGKESVNATLPVSLVMMRAIREYHDRTGYRVGY 798
            T  T  TD A  LPQ  E RNPGM LDMDWV  ARANRSAIERRA TLPGRRSVKKD+QAAW+ARA+SCIDLTTLAGDDTPGRVARLCAKA+QPVRAD+LEA+GL GLTVGAVCVYHDMI PAV AL+GSGIPVAAVSTGFPAGLSPF LRVAEI ESVKAGA EIDIVISRR VL GDWQGLYEEM AFR ACGEAHVKAILATGELGTLQNVARASLVCMMAGADFIKTSTGKE VNATLPVSLVMMRAIREY+ RTGYRVGY
Sbjct:    4 TQTTATTDLATQLPQAVEPRNPGMPLDMDWVMRARANRSAIERRAATLPGRRSVKKDHQAAWMARAISCIDLTTLAGDDTPGRVARLCAKAKQPVRADILEAIGLPGLTVGAVCVYHDMIAPAVSALQGSGIPVAAVSTGFPAGLSPFALRVAEIGESVKAGAREIDIVISRRKVLTGDWQGLYEEMRAFREACGEAHVKAILATGELGTLQNVARASLVCMMAGADFIKTSTGKEGVNATLPVSLVMMRAIREYYARTGYRVGY 268          
BLAST of mRNA_C-australica_Contig_9847.1.1 vs. uniprot
Match: A0A2R8AUL1_9RHOB (Deoxyribose-phosphate aldolase n=1 Tax=Pseudoprimorskyibacter insulae TaxID=1695997 RepID=A0A2R8AUL1_9RHOB)

HSP 1 Score: 447 bits (1149), Expect = 2.440e-156
Identity = 229/266 (86.09%), Postives = 242/266 (90.98%), Query Frame = 1
Query:    1 MTTGTVHTDKAAHLPQVHEARNPGMALDMDWVRAARANRSAIERRAGTLPGRRSVKKDYQAAWLARAVSCIDLTTLAGDDTPGRVARLCAKARQPVRADLLEALGLEGLTVGAVCVYHDMIEPAVKALEGSGIPVAAVSTGFPAGLSPFHLRVAEIEESVKAGAAEIDIVISRRLVLRGDWQGLYEEMCAFRAACGEAHVKAILATGELGTLQNVARASLVCMMAGADFIKTSTGKESVNATLPVSLVMMRAIREYHDRTGYRVGY 798
            MTT         HLPQ  E RNPGMALD+DWV  ARANRSAIERRA +LP RRSVKKD QAAWL RA+SCIDLTTLAGDDT GRVARLCAKARQPVRADLL ALG+EGLTVGAVCVYHDM+EPAV AL+GSGIPVAAVSTGFPAGLSPFHLRVAEIEESVKAGAAEIDIVISRR VL G+WQGLY+EM AFRAACG+AHVKAILATGELGTLQNVARASL+CMMAGADFIKTSTGKESVNATLPVSLVM+RAIR+Y+DRTGYRVGY
Sbjct:    1 MTTTEATALGTHHLPQTIEPRNPGMALDLDWVMQARANRSAIERRAASLPARRSVKKDNQAAWLCRAISCIDLTTLAGDDTAGRVARLCAKARQPVRADLLAALGMEGLTVGAVCVYHDMVEPAVAALQGSGIPVAAVSTGFPAGLSPFHLRVAEIEESVKAGAAEIDIVISRRHVLTGNWQGLYDEMRAFRAACGDAHVKAILATGELGTLQNVARASLICMMAGADFIKTSTGKESVNATLPVSLVMIRAIRDYYDRTGYRVGY 266          
BLAST of mRNA_C-australica_Contig_9847.1.1 vs. uniprot
Match: A0A8J7WGK5_9RHOB (Deoxyribose-phosphate aldolase n=1 Tax=Aestuariicoccus sp. KMU-90 TaxID=2827239 RepID=A0A8J7WGK5_9RHOB)

HSP 1 Score: 446 bits (1146), Expect = 7.230e-156
Identity = 232/267 (86.89%), Postives = 240/267 (89.89%), Query Frame = 1
Query:    1 MTTGTVHTDKAA-HLPQVHEARNPGMALDMDWVRAARANRSAIERRAGTLPGRRSVKKDYQAAWLARAVSCIDLTTLAGDDTPGRVARLCAKARQPVRADLLEALGLEGLTVGAVCVYHDMIEPAVKALEGSGIPVAAVSTGFPAGLSPFHLRVAEIEESVKAGAAEIDIVISRRLVLRGDWQGLYEEMCAFRAACGEAHVKAILATGELGTLQNVARASLVCMMAGADFIKTSTGKESVNATLPVSLVMMRAIREYHDRTGYRVGY 798
            MTT T      A  LPQ  E RNPGM LDMDWV  ARANRSAIERRA TLPGRRSVKKD+QAAWLARA+SCIDLTTL+GDDT GRVARLCAKARQPVR DLL ALGLEGLTVGAVCVYHDMIEPAV AL GSGIPVAAVSTGFPAGLSPFHLR+AEI ESV+AGA EIDIVISRR VL GDWQGLY+EM AFRAACG AHVKAILATGELGTLQNVARASLVCMMAGADFIKTSTGKESVNATLPVSLVM+RAIREYH+RTGYRVGY
Sbjct:    1 MTTATATASPTATQLPQTTEGRNPGMDLDMDWVMRARANRSAIERRATTLPGRRSVKKDHQAAWLARAISCIDLTTLSGDDTAGRVARLCAKARQPVRPDLLAALGLEGLTVGAVCVYHDMIEPAVTALHGSGIPVAAVSTGFPAGLSPFHLRLAEIGESVQAGAEEIDIVISRRKVLTGDWQGLYDEMRAFRAACGAAHVKAILATGELGTLQNVARASLVCMMAGADFIKTSTGKESVNATLPVSLVMVRAIREYHERTGYRVGY 267          
BLAST of mRNA_C-australica_Contig_9847.1.1 vs. uniprot
Match: A0A1B1PMN5_9RHOB (Deoxyribose-phosphate aldolase n=14 Tax=Roseobacteraceae TaxID=2854170 RepID=A0A1B1PMN5_9RHOB)

HSP 1 Score: 444 bits (1143), Expect = 1.930e-155
Identity = 229/262 (87.40%), Postives = 237/262 (90.46%), Query Frame = 1
Query:   13 TVHTDKAAHLPQVHEARNPGMALDMDWVRAARANRSAIERRAGTLPGRRSVKKDYQAAWLARAVSCIDLTTLAGDDTPGRVARLCAKARQPVRADLLEALGLEGLTVGAVCVYHDMIEPAVKALEGSGIPVAAVSTGFPAGLSPFHLRVAEIEESVKAGAAEIDIVISRRLVLRGDWQGLYEEMCAFRAACGEAHVKAILATGELGTLQNVARASLVCMMAGADFIKTSTGKESVNATLPVSLVMMRAIREYHDRTGYRVGY 798
            T+  D+   LPQVHE RNPGM LDMD V    ANRSAIERRA TLPGRRSVKKDYQAAWLARA+SCIDLTTLAGDDTPGRVARLCAKARQPVRAD+LEALGLEGLT GAVCVYHDMI PAV ALEG+GIPVAAVSTGFPAGLSPFHLRVAEI ESVKAGA EIDIVISRR VL GDWQ LY+EM AFR ACGEAHVKAILATGELGTLQNVARAS+VCMMAGADFIKTSTGKESVNATLPVSLVMMRAIREY + TGYRVGY
Sbjct:    4 TMTRDETRLLPQVHEPRNPGMPLDMDVVMRCTANRSAIERRAATLPGRRSVKKDYQAAWLARAISCIDLTTLAGDDTPGRVARLCAKARQPVRADILEALGLEGLTTGAVCVYHDMIAPAVAALEGTGIPVAAVSTGFPAGLSPFHLRVAEITESVKAGAREIDIVISRRHVLTGDWQALYDEMRAFREACGEAHVKAILATGELGTLQNVARASMVCMMAGADFIKTSTGKESVNATLPVSLVMMRAIREYFEETGYRVGY 265          
BLAST of mRNA_C-australica_Contig_9847.1.1 vs. uniprot
Match: A0A1H3HVF4_9RHOB (Deoxyribose-phosphate aldolase n=1 Tax=Citreimonas salinaria TaxID=321339 RepID=A0A1H3HVF4_9RHOB)

HSP 1 Score: 442 bits (1137), Expect = 2.410e-154
Identity = 224/247 (90.69%), Postives = 233/247 (94.33%), Query Frame = 1
Query:   58 ARNPGMALDMDWVRAARANRSAIERRAGTLPGRRSVKKDYQAAWLARAVSCIDLTTLAGDDTPGRVARLCAKARQPVRADLLEALGLEGLTVGAVCVYHDMIEPAVKALEGSGIPVAAVSTGFPAGLSPFHLRVAEIEESVKAGAAEIDIVISRRLVLRGDWQGLYEEMCAFRAACGEAHVKAILATGELGTLQNVARASLVCMMAGADFIKTSTGKESVNATLPVSLVMMRAIREYHDRTGYRVGY 798
            ARNPG ALDMDWV  ARANRSA+ERR  TLPGRRSVKK+YQAAWLARA+SCIDLTTLAGDDTPGRV RLCAKARQPVRAD+L+ALGL  LTVGAVCVYHDMIEPAV AL+GSGIPVAAVSTGFPAGLSP HLRVAEIEESVKAGAAEIDIVISRR VL GDWQGLY+EM AFR ACG+AHVKAILATGELGTLQNVARASLVCMMAGADFIKTSTGKESVNATLPVSLVM+RAIREYHDRTGYRVGY
Sbjct:   31 ARNPGTALDMDWVMRARANRSAVERRCATLPGRRSVKKEYQAAWLARAISCIDLTTLAGDDTPGRVQRLCAKARQPVRADILDALGLPDLTVGAVCVYHDMIEPAVAALKGSGIPVAAVSTGFPAGLSPMHLRVAEIEESVKAGAAEIDIVISRRKVLTGDWQGLYDEMRAFRQACGDAHVKAILATGELGTLQNVARASLVCMMAGADFIKTSTGKESVNATLPVSLVMLRAIREYHDRTGYRVGY 277          
The following BLAST results are available for this feature:
BLAST of mRNA_C-australica_Contig_9847.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A0N7LZS8_9RHOB1.300e-16290.46Deoxyribose-phosphate aldolase n=5 Tax=Rhodobacter... [more]
A0A238KD27_9RHOB1.920e-16291.76Deoxyribose-phosphate aldolase n=1 Tax=Maliponia a... [more]
A0A6F8Q1Z5_9RHOB4.660e-16188.35Deoxyribose-phosphate aldolase n=8 Tax=Roseobacter... [more]
UPI000EF4993D7.430e-16091.34deoxyribose-phosphate aldolase n=1 Tax=Tropicibact... [more]
A0A7W6GT98_9RHOB6.530e-15991.02Deoxyribose-phosphate aldolase n=1 Tax=Sagittula m... [more]
A0A2D4USV2_9RHOB1.300e-15687.17Deoxyribose-phosphate aldolase n=2 Tax=Rhodobacter... [more]
A0A2R8AUL1_9RHOB2.440e-15686.09Deoxyribose-phosphate aldolase n=1 Tax=Pseudoprimo... [more]
A0A8J7WGK5_9RHOB7.230e-15686.89Deoxyribose-phosphate aldolase n=1 Tax=Aestuariico... [more]
A0A1B1PMN5_9RHOB1.930e-15587.40Deoxyribose-phosphate aldolase n=14 Tax=Roseobacte... [more]
A0A1H3HVF4_9RHOB2.410e-15490.69Deoxyribose-phosphate aldolase n=1 Tax=Citreimonas... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-australica_Contig_9847contigC-australica_Contig_9847:57..854 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Chrysoparadoxa australica CS_1217 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog501479.ACNW01000095_gene1602
Preferred namedeoC
PFAMsDeoC
Model size798
Max annot lvl28211|Alphaproteobacteria
KEGG rclassRC00436,RC00437
KEGG koko:K01619
KEGG ReactionR01066
KEGG Pathwayko00030,map00030
Hectar predicted targeting categoryother localisation
Exons1
Evalue9.37e-156
EggNOG OGsCOG0274@1|root,COG0274@2|Bacteria,1N8AG@1224|Proteobacteria,2TS26@28211|Alphaproteobacteria
EC4.1.2.4
DescriptionCatalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy- D-ribose 5-phosphate
Cds size798
COG categoryF
BRITEko00000,ko00001,ko01000
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1682588851.7351844-CDS-C-australica_Contig_9847:56..8541682588851.7351844-CDS-C-australica_Contig_9847:56..854Chrysoparadoxa australica CS_1217CDSC-australica_Contig_9847 57..854 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_C-australica_Contig_9847.1.1prot_C-australica_Contig_9847.1.1Chrysoparadoxa australica CS_1217polypeptideC-australica_Contig_9847 57..854 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_C-australica_Contig_9847.1.1

>prot_C-australica_Contig_9847.1.1 ID=prot_C-australica_Contig_9847.1.1|Name=mRNA_C-australica_Contig_9847.1.1|organism=Chrysoparadoxa australica CS_1217|type=polypeptide|length=266bp
MTTGTVHTDKAAHLPQVHEARNPGMALDMDWVRAARANRSAIERRAGTLP
GRRSVKKDYQAAWLARAVSCIDLTTLAGDDTPGRVARLCAKARQPVRADL
LEALGLEGLTVGAVCVYHDMIEPAVKALEGSGIPVAAVSTGFPAGLSPFH
LRVAEIEESVKAGAAEIDIVISRRLVLRGDWQGLYEEMCAFRAACGEAHV
KAILATGELGTLQNVARASLVCMMAGADFIKTSTGKESVNATLPVSLVMM
RAIREYHDRTGYRVGY
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mRNA from alignment at C-australica_Contig_9847:57..854+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_C-australica_Contig_9847.1.1 ID=mRNA_C-australica_Contig_9847.1.1|Name=mRNA_C-australica_Contig_9847.1.1|organism=Chrysoparadoxa australica CS_1217|type=mRNA|length=798bp|location=Sequence derived from alignment at C-australica_Contig_9847:57..854+ (Chrysoparadoxa australica CS_1217)
ATGACCACCGGCACCGTCCATACAGACAAGGCCGCGCATTTGCCGCAGGT CCACGAGGCGCGTAACCCCGGCATGGCGCTGGATATGGACTGGGTCCGGG CCGCCCGCGCCAATCGGTCAGCGATTGAGAGACGCGCGGGCACCCTGCCC GGCAGGCGTTCTGTCAAAAAGGACTATCAGGCCGCGTGGCTGGCCCGTGC TGTGTCCTGCATCGACCTGACAACATTGGCGGGCGACGACACGCCCGGCC GCGTCGCCCGCCTGTGCGCCAAGGCGCGCCAACCGGTCCGCGCTGACCTG CTGGAGGCATTGGGGCTGGAGGGGCTGACCGTGGGCGCGGTTTGTGTGTA CCACGATATGATCGAGCCTGCGGTGAAGGCGCTGGAAGGATCAGGCATCC CGGTGGCCGCCGTCTCTACCGGGTTTCCTGCGGGGCTGTCGCCGTTCCAC CTGCGCGTGGCCGAAATAGAGGAAAGCGTGAAGGCAGGCGCGGCAGAGAT CGACATCGTGATTTCCCGCCGCCTTGTCCTGCGCGGCGACTGGCAAGGGC TTTATGAAGAGATGTGCGCCTTTCGCGCCGCCTGCGGTGAGGCACACGTC AAGGCGATCCTCGCCACCGGAGAGTTGGGCACCTTGCAGAACGTAGCGCG TGCGTCGCTGGTCTGCATGATGGCGGGGGCGGATTTCATCAAGACTTCGA CCGGCAAGGAGTCGGTAAACGCCACCCTGCCCGTCAGTTTGGTGATGATG CGGGCGATCCGCGAATATCACGACCGCACTGGCTATCGTGTCGGCTAT
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Coding sequence (CDS) from alignment at C-australica_Contig_9847:57..854+

>mRNA_C-australica_Contig_9847.1.1 ID=mRNA_C-australica_Contig_9847.1.1|Name=mRNA_C-australica_Contig_9847.1.1|organism=Chrysoparadoxa australica CS_1217|type=CDS|length=798bp|location=Sequence derived from alignment at C-australica_Contig_9847:57..854+ (Chrysoparadoxa australica CS_1217)
ATGACCACCGGCACCGTCCATACAGACAAGGCCGCGCATTTGCCGCAGGT
CCACGAGGCGCGTAACCCCGGCATGGCGCTGGATATGGACTGGGTCCGGG
CCGCCCGCGCCAATCGGTCAGCGATTGAGAGACGCGCGGGCACCCTGCCC
GGCAGGCGTTCTGTCAAAAAGGACTATCAGGCCGCGTGGCTGGCCCGTGC
TGTGTCCTGCATCGACCTGACAACATTGGCGGGCGACGACACGCCCGGCC
GCGTCGCCCGCCTGTGCGCCAAGGCGCGCCAACCGGTCCGCGCTGACCTG
CTGGAGGCATTGGGGCTGGAGGGGCTGACCGTGGGCGCGGTTTGTGTGTA
CCACGATATGATCGAGCCTGCGGTGAAGGCGCTGGAAGGATCAGGCATCC
CGGTGGCCGCCGTCTCTACCGGGTTTCCTGCGGGGCTGTCGCCGTTCCAC
CTGCGCGTGGCCGAAATAGAGGAAAGCGTGAAGGCAGGCGCGGCAGAGAT
CGACATCGTGATTTCCCGCCGCCTTGTCCTGCGCGGCGACTGGCAAGGGC
TTTATGAAGAGATGTGCGCCTTTCGCGCCGCCTGCGGTGAGGCACACGTC
AAGGCGATCCTCGCCACCGGAGAGTTGGGCACCTTGCAGAACGTAGCGCG
TGCGTCGCTGGTCTGCATGATGGCGGGGGCGGATTTCATCAAGACTTCGA
CCGGCAAGGAGTCGGTAAACGCCACCCTGCCCGTCAGTTTGGTGATGATG
CGGGCGATCCGCGAATATCACGACCGCACTGGCTATCGTGTCGGCTAT
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