mRNA_C-australica_Contig_984.3.1 (mRNA) Chrysoparadoxa australica CS_1217

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_C-australica_Contig_984.3.1
Unique NamemRNA_C-australica_Contig_984.3.1
TypemRNA
OrganismChrysoparadoxa australica CS_1217 (Chrysoparadoxa australica CS_1217)
Homology
BLAST of mRNA_C-australica_Contig_984.3.1 vs. uniprot
Match: D7FP09_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FP09_ECTSI)

HSP 1 Score: 491 bits (1264), Expect = 2.480e-161
Identity = 274/595 (46.05%), Postives = 367/595 (61.68%), Query Frame = 3
Query:  261 TEHSRSVWRKEAGHHGEAKDAWLIPKWHAAPSECLELLDMLNTPVGQHHLGAYARQTHTQELLFIWADLSEFRTIPSKDFMLKKAKQIYHKYVSTKAMQTLTFIPTGLRNYVANKIFVAEGDLNAMDQDFLAQLMQSTLLEIHKTIYSAFRLE-EDRYNAYVSDLRENYNQIREGDFEYFEKLGEGAFGVVVRCRKKSTGEDLAMKIQIKTALIKSMHGQASKLDNERRIFAACNHPFILQMKYAFTTPQHAIIVTNLVPTGTLQDAIDTSPDKRLSHERARLYTAEISLALHHLHDLGLIYRDLKPRNVMLGPDGHIQLADMGGVGDGAGNITRGQNQAVKAETISRRRT---FRRRSIMGTQGYMAPEMVRLMGNQQANQSIGYSAAVDWWSLGVTCYKMLTGARPFEMAPRSRLKKLAGRSRSNTDELAKVTAPVHYPDYLENDAVNLLRALLAHNEKDRLGSGPKGWEHLKEHAFFKGLDWDRLSDKLIPAPFIPEMPENSYSDSDEGTTYAHMIKLLEDHERMKITHRKHFNSEPSAEQQKLFLNWHYINASTLKLEMGIGNEMEALHTSYKAQQLMGPSQGSPDSQRWS 2033
            TEH+ +VWRKE G+H +   + ++P      +E +ELL ML++PVGQ+ LG ++ +  TQ +LF W+D+ E+R IP+ D+   KAKQI+ KY+   A   L F+P GL   + N +  A  D N +  D   Q+ +     I +  +   +     RY AY  +    +N+I   DF Y EKLGEGAFG VV   KKSTG   AMKIQ KT L++S     S+LDNE+ +F ACNHPF+LQM YAF T  HAIIV NLV TG LQDAID+SP KRL   RAR Y AEI +AL HLHD+GL+YRDLKPRNVMLG DGHIQLADMGGVGD  G+++  +       T+ RR T   F+RRSIMGT+GYMAPEM +L+ NQ  +Q  GY  AVDWWSLGVT YKMLTGARPF+  P +R + +    R  T E  K+ A V YP Y+   AV+ + ALL H+  +RLGSGP G E +K HAF  G+ W+RL+ K +  P+IP   +    D     ++  M++ + + +      +++ N + S + QK F  W YI+  TL++EMG+   M+ +  ++K  QL G    S  +   S
Sbjct:   23 TEHA-TVWRKE-GYHDDFTKSPILPDDREDITEYVELLAMLHSPVGQNFLGRFSMEIGTQHVLFAWSDIQEYRAIPTVDYRFTKAKQIFGKYLRASAT-ALDFLPEGLGEEIYNCLDQAREDKNLLGPDLFLQVQKVCFRHIFEFTFQELKNNYARRYEAYQEEGASRFNRIGVNDFWYMEKLGEGAFGKVVHVVKKSTGRHYAMKIQHKTELLRSFARSLSRLDNEKMVFQACNHPFVLQMDYAFQTELHAIIVLNLVTTGNLQDAIDSSPKKRLDEPRARFYAAEIVIALIHLHDMGLMYRDLKPRNVMLGMDGHIQLADMGGVGDCIGDMS-ARKIRKHGTTVKRRGTLMNFKRRSIMGTKGYMAPEMAKLL-NQSNDQRQGYDEAVDWWSLGVTVYKMLTGARPFDPPPWARKQSVVAMLRRQT-EFEKLQAEVEYPRYMSEAAVSFVSALLRHDVHERLGSGPNGKEGIKSHAFMAGIVWERLAAKNVEPPYIPT--QGPVCDEPLYDSFEEMMEGMHEADARYNKKKRNLNEKVSPDDQKWFATWRYISPQTLRIEMGLAQAMDDIEANFKVMQLTGEGSLSASASATS 609          
BLAST of mRNA_C-australica_Contig_984.3.1 vs. uniprot
Match: A0A7S1U415_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1U415_9STRA)

HSP 1 Score: 414 bits (1064), Expect = 9.730e-132
Identity = 222/548 (40.51%), Postives = 330/548 (60.22%), Query Frame = 3
Query:  363 LELLDMLNTPVGQHHLGAYARQTHTQELLFIWADLSEFRTIPSKDFMLKKAKQIYHKYVSTKAMQTLTFIPTGLRNYVANKIFVAEGDLNAMDQDFLAQLMQSTLLEIHKTIYSAFRLEEDRYNAYVSDLRENYNQIREGDFEYFEKLGEGAFGVVVRCRKKSTGEDLAMKIQIKTALIKSMHGQASKLDNERRIFAACNHPFILQMKYAFTTPQHAIIVTNLVPTGTLQDAIDTSPDKRLSHERARLYTAEISLALHHLHDLGLIYRDLKPRNVMLGPDGHIQLADMGGVGDGAGNITRGQNQAVKAETISRRRTFRRRSIMGTQGYMAPEMVRLMGNQQANQSIGYSAAVDWWSLGVTCYKMLTGARPFEMAPRSRLKKLAGRSRSNTD-ELAKVTAPVHYPDYLENDAVNLLRALLAHNEKDRLGSGPKGWEHLKEHAFFKGLDWDRLSDKLIPAPFIPEMPENSYSDSDEGTTYAHMIKLLEDHERMKITHRKHFNSE--PSAEQQKLFLNWHYINASTLKLEMGIGNEMEALHTSYKAQQLMG 1997
            +E  D+L+ P+GQ ++G +A+   T E  F W D+ EF+ IP+KD+   KA  IY KY+   A+  L  +    +      +  A GD + +  +    + Q   ++I+   +  F+   D+Y  Y  ++RE YN++   DFEY EKLGEG FG VV CRK STG+  AMKIQ+KTAL+ +     ++LD E+ +FAAC+HPFI+ + YAF TP HAI+   LV  G LQ+ ++  P KRL  +R  LYTAE+ LAL HLH+LGL+YRDLKP NV+LG DGH+QLADMGGV D  GN+   +N+    + +     +RRRSIMGT+GYMAPE++ LM    A +  GY+ AVD+WSLGVT YK+L G RPF+M+    L + +   +     E   +   +++P ++ +    L+  L+A + +DRLGS  +G + L +HAFF G+D+ +L  K + A + P++     S+     +Y+ M++ +   +      R +F+ E  PS  QQ+ F  W +++  TLK+EMGI  EM    T+ K QQ++G
Sbjct:   62 IECRDILDDPIGQRYVGQFAKSNFTHEHFFCWIDMQEFKAIPTKDYRRSKAMHIYDKYLKVGAVLELGSVAPQEKERFKGIVERARGDKSVVTPNMFDDIWQMVFVDIYHNTFIPFK-RSDKYEEYRKEIRETYNKVSVDDFEYMEKLGEGGFGRVVHCRKISTGKHYAMKIQLKTALLDTFWDDPTRLDAEKSVFAACHHPFIVSLDYAFQTPSHAILALGLVTAGDLQEIMEKEPSKRLDEDRVVLYTAEVVLALQHLHELGLMYRDLKPCNVLLGADGHVQLADMGGVADFKGNVLDHRNEKADDDGV-----YRRRSIMGTRGYMAPEVLDLMSAVSARK--GYTQAVDFWSLGVTVYKLLCGTRPFDMSSYDVLLEYSSEQKQQKQAEYDNLLHRIYFPTFISDAGCELIIGLMALHPEDRLGSNAEGVDGLTQHAFFNGMDFIKLGQKHLDAAYKPDV--QLPSEKPMYPSYSTMMEAITGPDD-----RSNFDWESVPSDRQQRHFDEWDFVSPHTLKVEMGIAGEMAVHDTNLKVQQILG 594          
BLAST of mRNA_C-australica_Contig_984.3.1 vs. uniprot
Match: A0A835ZAC1_9STRA (Kinase-like domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZAC1_9STRA)

HSP 1 Score: 391 bits (1005), Expect = 2.320e-123
Identity = 230/594 (38.72%), Postives = 333/594 (56.06%), Query Frame = 3
Query:  330 IPKWHAAPSECLELLDMLNTPVGQHHLGAYARQTHTQELLFIWADLSEFRTIPSKDFMLKKAKQIYHKYVSTKAMQTLTFIPTGLRNYVANKIFVAEGDLNAMDQDFLAQLMQSTLLEIHKTIYSAFRLEEDRYNAYVSDLRENYNQIREGDFEYFEKLGEGAFGVVVRCRKKSTGEDLAMKIQIKTALIKSMHGQASKLDNERRIFAACNHPFILQMKYAFTTPQHAIIVTNLVPTGTLQDAIDTSPDKRLSHERARLYTAEISLALHHLHDLGLIYRDLKPRNVMLGPDGHIQLADMGGVGDGA---------------------GNITRGQNQAVKAETISRRRTFRRRSIMGTQGYMAPEMVRLMGNQQANQSIGYSAAVDWWSLGVTCYKMLTGARPFEMAPRSRLKKLAGRSRSNTDELAKVTAPVHYPDYLENDAVNLLRALLAHNEKDRLGSGPKGWEHLKEHAFFKGLDWDRLSDKLIPAPFIPEMPENSYSDSDEGTTYAHMIKLLEDHERMKITHRK------HFNSEPSAEQQKLFLNWHYINASTLKLEMGIGNEMEALHTSYKAQQLMG-PSQGSPDSQR 2027
            +P    +  E +EL  +L  PVGQ ++GA+A++T T E  F W ++ E+R+IP+ D+    A  IY KY+   A+  L  +    R  +   +  ++ D +  +     ++ Q+  +E++   +  F++  D Y+     LRE YN++   DF+Y  ++GEG FG VV  RKKST   LAMKIQ+KTAL+++     +++DNERR+ AA  HPFI+ M YAF T   AI+V +LV  G LQ+AI+ +P+KRL+  R + Y AEI LAL HLH+LGL++RDLKP NV+LG DGH++L DMGGV + A                     G   +G  +A K       ++ RRRSIMGT GYMAPEMV L+   +A +  GY+ AVD+WSLGVT YK+LTG RPFE                N   L ++   V +P Y+  +A +L+  LL  NE  RLG+ P+    LK H FF G+DW RLS + +  P++P+         ++   YA    L+E +       R        +  +PS   Q+ F +W +I+  TLK+EMGI NEM +  T++K +QLMG P   S  S R
Sbjct:   11 LPAGVDSDPEHMELRTILEDPVGQKYIGAFAKKTLTHESFFAWTEIQEYRSIPTADYQRGMAMHIYQKYIKEGAILQLGCVKPADRQCIKAVLDQSKYDASVTNNQLYDKVQQAVFIEMYHNTFQRFKV-SDEYSEMRKMLRETYNRVCLSDFDYIAQIGEGGFGRVVHVRKKSTMAHLAMKIQLKTALLETFSDDPNRIDNERRVLAATYHPFIVGMNYAFQTETLAIMVLDLVTCGDLQEAINQAPNKRLNEVRVQFYVAEIILALSHLHELGLMFRDLKPCNVLLGQDGHVKLTDMGGVAEFAKGTCLDPMDSCSGSSPYMMEIGGQRKGNTEARKLS-----QSHRRRSIMGTHGYMAPEMVILLSQPRAVRK-GYTKAVDFWSLGVTMYKLLTGVRPFE----------------NKRFLNEILTEVRFPPYMSAEAKDLVIRLLDGNEHRRLGASPELLAELKAHPFFNGIDWVRLSVRHMIPPYVPDAKP-----LEQTPQYASFDALMEAYRTQDEADRSGGTPMCDWTQKPSPADQRFFQSWDFISMQTLKIEMGIANEMVSHDTNFKVRQLMGDPGDSSKASPR 576          
BLAST of mRNA_C-australica_Contig_984.3.1 vs. uniprot
Match: A0A8K1C8Y3_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1C8Y3_PYTOL)

HSP 1 Score: 375 bits (962), Expect = 8.690e-117
Identity = 227/580 (39.14%), Postives = 329/580 (56.72%), Query Frame = 3
Query:  312 AKDAWLIPKWHAAPSEC-----LELLDMLNTPVGQHHLGAYARQTHTQELLFIWADLSEFRTIPSKDFMLKKAKQIYHKYVSTKAMQTLTFIPTGLRNYVANKIFVAEGDLNAMDQDFLAQLMQSTLLEIHKTIYSAFRLEEDRYNAYVSDLRENYNQIREGDFEYFEKLGEGAFGVVVRCRKKSTGEDLAMKIQIKTALIKSMHGQASKLDNERRIFAACNHPFILQMKYAFTTPQHAIIVTNLVPTGTLQDAIDTSPDKRLSHERARLYTAEISLALHHLHDLGLIYRDLKPRNVMLGPDGHIQLADMG-GVGDGAGNITRGQNQAVKAETISRRRTFRRRSIMGTQGYMAPEMV--RLMGNQQANQSIGYSAAVDWWSLGVTCYKMLTGARPFEM---------APRSRLKKLAGRSRSNTDELAKVTAPVHYPDYLENDAVNLLRALLAHNEKDRLGSGP-KGWEHLKEHAFFKGLDWDRLSDKLIPAPFIPEMPENSYSDSDEGTTYAHMIKLLEDHERMKITHRKHFNSEPSAEQQKLFLNWHYINASTLKLEMGIGNEMEALHTSYKAQQLMG 1997
            AK  W I   +A  S        ELL +LN PVGQ H+G +A++  T E  F W ++ EFR  PS  +    AK IY KY+   A   L  I   +      KI   E D   M  DF  +LM     ++ +  Y  F+   + Y+ Y  ++++ YN++   DFEY E LG G FG VV  RKKSTG+  AMKIQ+KT L+   H Q S++ +E+ I   C++PF+L M Y+F T  HAIIVT LV  G L +A+ +S +  ++ +R RLY AEI LAL+H+HDLGLIYRDLKP NV+LG DGH+ LADMG   G   GN+ +  N   K    + + T RR++ +GT+GYMAPE++  +L+   + +Q  GY+ AVD+WSLGVT +++L G +PF +              + +L+ R++    EL K+   V +P +L  +A + LR LL  N + RLG  P KG++   +HAFF+ +DW++L  K I   F P +P    +D     +Y HM+   +  ++  I H   + ++P  E QK F +W YI+  TL+ E+GI  E++  +  YK  QL G
Sbjct:   38 AKTQWRISAPYAGTSAEPTGPEQELLAILNDPVGQKHIGIFAKKIMTAETFFCWVEIKEFRDAPSIGYRKSLAKLIYKKYIKNGAPMALGSITADIIALYDKKITDMERDATLMTPDFFDRLMTLITTDMVQNTYLRFKTSSE-YDIYKKEMKDTYNKVTVEDFEYLELLGSGGFGRVVHARKKSTGKHYAMKIQLKTGLLDEHHDQLSQITSEKDILQICHNPFVLDMHYSFQTSAHAIIVTELVRGGDLGEALKSSREGYITEDRVRLYAAEIGLALNHMHDLGLIYRDLKPGNVLLGEDGHVVLADMGLAAGYDPGNLKKDDNGNTKYVPQNAKFT-RRKTTVGTRGYMAPEIISGKLV---KRDQRPGYTHAVDYWSLGVTIFELLCGFQPFSVYSGGNFFQEVANEEIFRLSPRTQHKI-ELQKMAQGVTFPPHLSKNAQDFLRRLLEVNAEIRLGCSPEKGFQEFMDHAFFEVVDWEKLMMKHIDPKFKPTLPP--LTDKKIYNSYDHMMSHFDMRDKDFIRHD--WYADPDPEMQKHFDSWDYISQYTLRAELGIAKELDETNIPYKVLQLTG 607          
BLAST of mRNA_C-australica_Contig_984.3.1 vs. uniprot
Match: F0WFN3_9STRA (Protein kinase putative n=2 Tax=Albugo TaxID=65356 RepID=F0WFN3_9STRA)

HSP 1 Score: 360 bits (924), Expect = 3.990e-111
Identity = 208/556 (37.41%), Postives = 321/556 (57.73%), Query Frame = 3
Query:  366 ELLDMLNTPVGQHHLGAYARQTHTQELLFIWADLSEFRTIPSKDFMLKKAKQIYHKYVSTKAMQTLTFIPTGLRNYVANKIFVAEGDLNAMDQDFLAQLMQSTLLEIHKTIYSAFRLEEDRYNAYVSDLRENYNQIREGDFEYFEKLGEGAFGVVVRCRKKSTGEDLAMKIQIKTALIKSMHGQASKLDNERRIFAACNHPFILQMKYAFTTPQHAIIVTNLVPTGTLQDAIDTSPDKRLSHERARLYTAEISLALHHLHDLGLIYRDLKPRNVMLGPDGHIQLADMGGVGDGAGNITRGQNQAVKAETISRRRTFRRRSIMGTQGYMAPEMV--RLMGNQQANQSIGYSAAVDWWSLGVTCYKMLTGARPF---------EMAPRSRLKKLAGRSRSNTDELAKVTAPVHYPDYLENDAVNLLRALLAHNEKDRLGSGPK-GWEHLKEHAFFKGLDWDRLSDKLIPAPFIPEMPENSYSDSDEGTTYAHMIKLLEDHERMKITHRKHFNSEPSAEQQKLFLNWHYINASTLKLEMGIGNEMEALHTSYKAQQLMG 1997
            ELL +++ PVGQ HLGAYA++  T E  F W ++++FR  PS  +    AK I+ KY+ + +   L  +P+ +  +  N I   E + + +  D    LM+  L +++++ +  F+   + Y+ Y  +++E YN++   DFEY E LG G FG VV  RKKSTG+  AMK+Q+K  L+     Q +++ +E+ I  AC++PF+L M Y+F TP HAIIV+ LV  G L  A+ +S +  LS +R RLY AEI LAL+H+H+LGLIYRDLKP NV+LG DGHI LADMG +  G        N+     T +  +  RR++ +GT+GYMAPE++  +L+   + +Q  GY+ A+D+WSLGVT Y++LTG +PF         +   +  + +++ R++    EL K+    +YP +L       L+ LL  N   RLG  P  G+     H FF  +DW++L  K I   + P +P    +D     +Y  M+   +  ++  I H   +   P ++ QK F +W YI++ TL+ E+GI NE++A +  YK  QL G
Sbjct:   56 ELLAVVSDPVGQKHLGAYAKKILTSETFFCWVEINDFRDAPSLGYRKSLAKLIHKKYIKSGSPMALGSLPSDVVAHYENHIKAMETNESIVTPDLFDLLMKYVLSDMYQSTFVRFKASAE-YDLYRKEVKETYNRVTVDDFEYLELLGSGGFGRVVHARKKSTGKHYAMKVQLKAGLLDEYQDQLAQITSEKDILQACHNPFVLDMHYSFQTPAHAIIVSELVRGGDLGSALASSRESHLSEDRVRLYAAEIGLALNHMHELGLIYRDLKPVNVLLGEDGHIVLADMG-LAAGFDTCLLKVNEDGTRVTPATPKLTRRKTTVGTKGYMAPEIIAGKLV---KRSQRPGYTFAIDYWSLGVTIYELLTGYQPFGVHSSQYVLQQVAQEDMFRMSPRTQHQL-ELQKMAQGTNYPSHLSRVVQEFLQQLLEVNPDQRLGCSPDHGFAEFMGHPFFDSIDWEKLMVKHIDPTYRPALPP--LTDKKIYNSYQQMMGQFDARDKDYIRHD--WYKTPPSDMQKHFDSWDYISSHTLRAELGIANELDATNIPYKVLQLTG 601          
BLAST of mRNA_C-australica_Contig_984.3.1 vs. uniprot
Match: D8LEF7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LEF7_ECTSI)

HSP 1 Score: 357 bits (917), Expect = 8.380e-111
Identity = 205/564 (36.35%), Postives = 323/564 (57.27%), Query Frame = 3
Query:  363 LELLDMLNTPVGQHHLGAYARQTHTQELLFIWADLSEFRTIPSKDFMLKKAKQIYHKYVSTKAMQTLTFIPTGLRNYVANKIFVA----EGDLNAMDQDFLAQLMQSTLLEIHKTIYSAFRLEEDRYNAYVSDLRENYNQIREGDFEYFEKLGEGAFGVVVRCRKKSTGEDLAMKIQIKTALIKSMHGQASKLDNERRIFAACNHPFILQMKYAFTTPQHAIIVTNLVPTGTLQDAIDTSPDKRLSHERARLYTAEISLALHHLHDLGLIYRDLKPRNVMLGPDGHIQLADMGGVGDGA-------------------GNITRGQNQAVKAETISRRRTFRRRSIMGTQGYMAPEMVRLMGNQQANQSIGYSAAVDWWSLGVTCYKMLTGARPFEMAPRSRLKKLAGRSRSNTDELAKVTAPVHYPDYLENDAVNLLRALLAHNEKDRLGSGPKGWEHLKEHAFFKGLDWDRLSDKLIPAPFIPEMPENSYSDSDEGTTYAHMIKLLEDHERMKITHRKHFN--SEPSAEQQKLFLNWHYINASTLKLEMGIGNEMEALHTSYK 1979
            LE+  +L  P+GQ ++G +A++  TQE  + W D+ EFR+IP+ D+   K+  IY KY+   A+  +  IP   R  + + I        G+ + +  D      ++   E+    +  F    + Y    +D++  YN++   DF Y E++GEG FG VV  +KK+T    AMKIQ+KTAL+ + +   +++D+ERR+ +  +HPFI+ M YAF TP+  I+   LV  G LQ+AIDT+P+ R+  +R + Y+AEI LAL HLHDLGL+YRDLKP NV+L  DGH++LADMGGV + A                   G++ + ++      T++ +   RRRSIMGTQGYMAPEMV ++  Q  +  +GYS AVD+WSLGVT +K+LTG+RPF+              R    EL      + +P+Y+ ++A +++  LLA  E +RLG  P+    LK H +F+G+DW RLS + +  P++P++P     +     T+ H+++     + M+   +  ++    P+ E Q  F +W +++  TLK+E+GI +EM     S+K
Sbjct:   19 LEMRAILEDPIGQKYIGQFAKKVMTQESFYAWVDIQEFRSIPTGDYRRGKSMHIYQKYIREGAVLQVGSIPAEERAKIKHIIDAGVVDKAGNKSGISTDMFDFFRKAVFKEMFYNTFQRFSASPE-YAQMHADIKNAYNKVCPDDFLYIERIGEGGFGRVVHVKKKTTQSHYAMKIQLKTALLDTFNDDPTRIDHERRVLSVTHHPFIVGMDYAFQTPELGIMCLELVTGGDLQEAIDTAPEGRIEAKRVQFYSAEIILALVHLHDLGLMYRDLKPCNVLLMGDGHVKLADMGGVAEFADGTCLETNKDKNPFTGTEIGSLPQSKSSEDGPPTLNNK--HRRRSIMGTQGYMAPEMV-ILPKQPRSVRVGYSNAVDYWSLGVTVFKLLTGSRPFD--------------RRRFQELLDT---ISWPEYVGSEARSVISGLLACKETERLGGTPENLLALKSHEYFEGIDWLRLSQRHVLPPYLPKVPP--LREEPLYQTFDHLMRDFYAQQEMESATKDTYDWFVAPTDEDQAFFNSWDFVSMHTLKIELGISSEMAVHDQSFK 559          
BLAST of mRNA_C-australica_Contig_984.3.1 vs. uniprot
Match: K3X895_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3X895_GLOUD)

HSP 1 Score: 359 bits (922), Expect = 8.800e-111
Identity = 215/570 (37.72%), Postives = 326/570 (57.19%), Query Frame = 3
Query:  366 ELLDMLNTPVGQHHLGAYARQTHTQELLFIWADLSEFRTIPSKDFMLKKAKQIYHKYVSTKAMQTLTFIPTGLRNYVANKIFVAEGDLNAMDQDFLAQLMQSTLLEIHKTIYSAFRLEEDRYNAYVSDLRENYNQIREGDFEYFEKLGEGAFGVVVRCRKKSTGEDLAMKIQIKTALIKSMHGQASKLDNERRIFAACNHPFILQMKYAFTTPQHAIIVTNLVPTGTLQDAIDTSPDKRLSHERARLYTAEISLALHHLHDLGLIYRDLKPRNVMLGPDGHIQLADMGGVGDGAGNITRGQNQAVKAETISRRRTFRRRSIMGTQGYMAPEMV--RLMGNQQANQSIGYSAAVDWWSLGVTCYKMLTGARPFEM---------APRSRLKKLAGRSRSNTDELAKVTAPVHYPDYLENDAVNLLRALLAHNEKDRLGSG-PKGWEHLKEHAFFKGLDWDRLSDKLIPAPFIPEMPENSYSDSDEGTTYAHMIKLLEDHERMKITHRKHFNSEPSAEQQKLFLNWHYINASTLKLEMGIGNEMEALHTSYKAQQLMGPS----QGSPDSQR 2027
            ELL+ML+ PVGQ H+GA+A++  T E  F W ++ EF+  PS  +    AK IY KY+   +   L  I + L      KI   E + + M  +F   LM + + ++ +  +  F+   + Y+AY  D+++ YN++   DFEY E LG G FG VV  RKKSTG+  A+KIQ+K  L+   H Q  ++ +E+ I   C++PFIL M+Y+F TP HAIIVT LV  G L +A+  S +  +  +R RLY AEI LAL+H+H+LGLIYRDLKP NV+LG DGH+ LADMG        + +    + K   ++ + T RR++ +GT+GYMAPE++  +L+   + +Q  GY+ AVD+WSLGVT ++++ G +PF +              + +L+ R++    EL K+   V +P ++     + L+ LL  N + RLG    KG+    EH FF+ +DW++L  K I   F P +P    +D     +Y HM+   +  ++  I H   + ++P  EQQK F +W YI+ STL+ E+GI  E++  +  YK  QL G      Q  P +QR
Sbjct:   63 ELLNMLHDPVGQKHIGAFAKKIMTAETFFCWVEVKEFKDAPSIGYRKSLAKLIYKKYIKNGSTMALGSITSELIATYDKKITDMETNPSLMTPEFFDPLMTNIVNDMCQNTFLRFKTTPE-YDAYKKDVKDTYNKVTVEDFEYLELLGSGGFGRVVHARKKSTGKHYAIKIQLKAGLLDEHHDQLGQITSEKDILQVCHNPFILDMQYSFQTPAHAIIVTELVRGGDLGEALKASREGYIIEDRVRLYAAEIGLALNHMHELGLIYRDLKPGNVLLGEDGHVILADMGLAAGFDPTLLKKDENSSKYIPVNPKLT-RRKTTVGTRGYMAPEIISGKLV---KRDQRPGYTFAVDYWSLGVTIFELMCGYQPFSVYSGGNFFQEVANEEIFRLSPRTQHKI-ELQKMAQGVTFPAHISKCGQDFLKRLLDVNVEQRLGCNCEKGFAEFMEHPFFESIDWEKLMMKHIDPKFKPALP--LLTDKKIYNSYEHMMSHFDMRDKDFIRHD--WYADPPPEQQKHFESWDYISQSTLRAELGIAKELDETNIPYKVLQLTGEDTKGKQFRPVNQR 622          
BLAST of mRNA_C-australica_Contig_984.3.1 vs. uniprot
Match: A0A0P1B3D1_PLAHL (Agc protein kinase n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1B3D1_PLAHL)

HSP 1 Score: 355 bits (911), Expect = 5.260e-109
Identity = 223/589 (37.86%), Postives = 326/589 (55.35%), Query Frame = 3
Query:  312 AKDAWLIPKWHAAPSEC--LELLDMLNTPVGQHHLGAYARQTHTQELLFIWADLSEFRTIPSKDFMLKKAKQIYHKYVSTKAMQTLTFIPTGLRNYVANKIFVAEGDLN---AMDQDFLAQLMQSTLLEIHKTIYSAFRLEEDRYNAYVSDLRENYNQIREGDFEYFEKLGEGAFGVVVRCRKKSTGEDLAMKIQIKTALIKSMHGQASKLDNERRIFAACNHPFILQMKYAFTTPQHAIIVTNLVPTGTLQDAIDTSPDKRLSHERARLYTAEISLALHHLHDLGLIYRDLKPRNVMLGPDGHIQLADMG-GVGDGAGNITRGQNQAVKAETISRRRTFRRRSIMGTQGYMAPEMV--RLMGNQQANQSIGYSAAVDWWSLGVTCYKMLTGARPFE------------------MAPRSRLKKLAGRSRSNTDELAKVTAPVHYPDYLENDAVNLLRALLAHNEKDRLG-SGPKGWEHLKEHAFFKGLDWDRLSDKLIPAPFIPEMPENSYSDSDEGTTYAHMIKLLEDHERMKITHRKHFNSEPSAEQQKLFLNWHYINASTLKLEMGIGNEMEALHTSYKAQQLMG 1997
            AK  W I    A  +     ELL +L+ PVGQ H+GA+A++  T E  F W ++ EFR  PS  +    AK IY KY+   +   L  I + L  +   +I  AE D N   +   DF   LM + + ++ +  +  F+   + Y A+  DL++ YN++   DFEY E LG G FG VV  RKKSTG+  AMKIQ+KT L+   H Q S++ +E+ I   C++PF+L M Y+F T  HAIIVT LV  G L DA+    +  +  +R RLY AEI LAL+H+H+LGL+YRDLKP NV+LG DGH+ LADMG   G     + + ++       I  + T RRR+ +GT+GYMAPE+V  +LM   + N+  GY+ A+D+WSLGVT +++L G RPF                   ++PRS+LK           EL ++   V +P ++  +A + L+ LL    ++RLG +  KG+    EH FF+ +DW++L  K I   F P +     SD     +Y  M+   +   R K   R  + ++P  E QK F NW +I+ +TL+ E+GI  E++ ++  YK  QL G
Sbjct:   58 AKTQWKIAHQFARDTSTNEQELLQLLHDPVGQKHIGAFAKKIMTSETFFCWVEIKEFREAPSSGYRKSMAKLIYRKYIKNGSTMALGSITSDLITHYDKQI--AELDTNHGASATLDFFDPLMANIVADMCQNTFIRFKASPE-YEAFKKDLKDTYNKVTIEDFEYLEVLGSGGFGRVVHARKKSTGKHYAMKIQLKTGLLDEHHDQLSQITSEKDILQICHNPFVLDMHYSFQTSAHAIIVTELVRGGDLSDALKACREGYIHEDRVRLYAAEIGLALNHMHELGLLYRDLKPGNVLLGEDGHVILADMGLATGFDPLKLQKEESGEFWYTAIQPKLT-RRRTTVGTRGYMAPEIVSGKLM---KRNERQGYTYAIDFWSLGVTMFELLCGFRPFTSPSTGNYFQDLANDETYGLSPRSQLK----------IELERMAQCVTFPSHVSPNAQDFLKRLLEVLPENRLGCNDEKGFVEFIEHPFFETIDWEKLMMKHIDPTFKPAV--QLLSDKRIFNSYEQMMSYFDT--RDKDFSRYDWYADPDPEMQKYFDNWEFISLNTLRAELGIAKELDEMNIPYKVLQLTG 625          
BLAST of mRNA_C-australica_Contig_984.3.1 vs. uniprot
Match: H3GJZ7_PHYRM (Uncharacterized protein n=20 Tax=Peronosporaceae TaxID=4777 RepID=H3GJZ7_PHYRM)

HSP 1 Score: 351 bits (901), Expect = 7.390e-108
Identity = 218/579 (37.65%), Postives = 318/579 (54.92%), Query Frame = 3
Query:  312 AKDAWLIPKWHAA----PSEC-LELLDMLNTPVGQHHLGAYARQTHTQELLFIWADLSEFRTIPSKDFMLKKAKQIYHKYVSTKAMQTLTFIPTGLRNYVANKIFVAEGDL-NAMDQDFLAQLMQSTLLEIHKTIYSAFRLEEDRYNAYVSDLRENYNQIREGDFEYFEKLGEGAFGVVVRCRKKSTGEDLAMKIQIKTALIKSMHGQASKLDNERRIFAACNHPFILQMKYAFTTPQHAIIVTNLVPTGTLQDAIDTSPDKRLSHERARLYTAEISLALHHLHDLGLIYRDLKPRNVMLGPDGHIQLADMG-GVGDGAGNITRGQNQAVKAETISRRRTFRRRSIMGTQGYMAPEMVRLMGNQQANQSIGYSAAVDWWSLGVTCYKMLTGARPFEM---------APRSRLKKLAGRSRSNTDELAKVTAPVHYPDYLENDAVNLLRALLAHNEKDRLGSG-PKGWEHLKEHAFFKGLDWDRLSDKLIPAPFIPEMPENSYSDSDEGTTYAHMIKLLEDHERMKITHRKHFNSEPSAEQQKLFLNWHYINASTLKLEMGIGNEMEALHTSYKAQQLMG 1997
            AK  W I + +A     PS    ELL ML+ PVGQ H+GA+A++  T E  F W ++ EFR  PS  +    AK IY KY+   +   L  I + L      KI   E +  ++   DF   LM + + ++ +  +  F+   + Y  Y  DL++ YN++   DFEY E LG G FG VV  RKKSTG+  AMKIQ+KT L+   H Q S++ +E+ I   C++PF+L M Y+F TP HA+IVT LV  G L DA+ +S D  L  +R RLY AEI LAL+H+H+LGL+YRDLKP NV+LG DGH+ LADMG   G     + + ++      T    +  RR++ +GT+GYMAPE++                +VD+WSLGVT ++++ G +PF M              + +L+ R++    EL K+   V +P +L  +A + L+ LL  + + RLG    KG+    EH FF+ +DW++L  K I   F P +P    SD     +Y HM+   +  ++  I H   + ++P  E QK F  W YI+  TL+ E+GI  E++  +  YK  QL G
Sbjct:   42 AKTQWKITQPYAGANGEPSTNEQELLHMLHDPVGQKHIGAFAKKILTSETFFCWVEIKEFREAPSIGYRKSMAKLIYRKYIKNGSTMALGSITSDLIVLYDKKIAELEANHGSSATVDFFDPLMTNIVADMCQNTFMRFKASSE-YETYKKDLKDTYNKVTIEDFEYLELLGSGGFGRVVHARKKSTGKHYAMKIQLKTGLLDEHHDQLSQITSEKDILQICHNPFVLDMHYSFQTPAHAVIVTELVRGGDLGDALKSSRDGYLHEDRVRLYAAEIGLALNHMHELGLVYRDLKPGNVLLGEDGHVILADMGLAAGFDPLKLKKEESSGDFRYTPVLPKLTRRKTTVGTRGYMAPEII----------------SVDFWSLGVTIFELVCGFQPFSMHSSGNFFQEVANEEIFRLSPRTQHKI-ELQKMAQGVTFPLHLTRNAQDFLKRLLEVSPEHRLGCNVEKGFTEFMEHPFFETVDWEKLMMKHIDPKFKPALP--LLSDKKIYNSYEHMMSHFDMRDKDFIRHD--WYADPDPEMQKHFDTWDYISQYTLRAELGIAKELDETNIPYKVLQLTG 598          
BLAST of mRNA_C-australica_Contig_984.3.1 vs. uniprot
Match: A0A3R7KWF9_9STRA (Uncharacterized protein n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7KWF9_9STRA)

HSP 1 Score: 353 bits (906), Expect = 1.280e-107
Identity = 220/571 (38.53%), Postives = 329/571 (57.62%), Query Frame = 3
Query:  312 AKDAWLIPKW----HAAPSEC-LELLDMLNTPVGQHHLGAYARQTHTQELLFIWADLSEFRTIPSKDFMLKKAKQIYHKYV---STKAMQTLTFIPTGLRNYVANKIFVAEGDLNAMDQDFLAQLMQSTLLEIHKTIYSAFRLEEDRYNAYVSDLRENYNQIREGDFEYFEKLGEGAFGVVVRCRKKSTGEDLAMKIQIKTALIKSMHGQASKLDNERRIFAACNHPFILQMKYAFTTPQHAIIVTNLVPTGTLQDAIDTSPDKRLSHERARLYTAEISLALHHLHDLGLIYRDLKPRNVMLGPDGHIQLADMG-GVGDGAGNITR-GQNQAVKAETISRRRTFRRRSIMGTQGYMAPEMV--RLMGNQQANQSIGYSAAVDWWSLGVTCYKMLTGARPFEM---------APRSRLKKLAGRSRSNTDELAKVTAPVHYPDYLENDAVNLLRALLAHNEKDRLG-SGPKGWEHLKEHAFFKGLDWDRLSDKLIPAPFIPEMPENSYSDSDEGTTYAHMIKLLEDHERMKITHRKHFNSEPSAEQQKLFLNWHYINASTLKLEMGIGNEME 1958
            AK  W I +     H  PS    ELL+ML+ PVGQ H+GA+A++  T E  F W ++ EFR  PS  +    AK IY KY+   ST A+ ++T     L +     + V  G   +   DF   LM + + ++ K+ +  F+   + Y AY  DL++ YN++   DFEY E LG G FG VV  RKKSTG+  AMKIQ+KT L+   H Q S++ +E+ I   C++PF+L M Y+F TP HAIIVT LV  G L D +  S D  L  +R RLY AEI +A++H+H+LGL+YRDLKP NV+LG DGH+ LADMG   G     + + G +   + E +  + T RR++ +GT+GYMAPE++  +L+   + +Q  GY+ AVD+WSLGVT ++++ G +PF M              + +L+ R++    EL K+   V +P +L  +A + L+ LL  + + RLG +  KG+    EH+FF+ +DW++L  K I + F P +P    SD     +Y HM+   +  ++  I H   + ++P  E QK F  W +I+  TL+ E+GI  E++
Sbjct:   42 AKTQWKIAQPYGGNHGEPSTNERELLNMLHDPVGQKHIGAFAKKILTSETFFCWVEIKEFREAPSIGYRKSMAKLIYRKYIKNGSTMALGSITSELIALYDKNIADLDVKHG--TSATVDFFDPLMNNIVADMCKSTFLRFKTSPE-YEAYKKDLKDTYNKVTIEDFEYLELLGSGGFGRVVHARKKSTGKHYAMKIQLKTGLLDEHHDQLSQITSEKDILQICHNPFVLDMHYSFQTPAHAIIVTELVRGGDLGDVLKASRDGYLHEDRVRLYAAEIGMAINHMHELGLVYRDLKPGNVLLGEDGHVILADMGLAAGFDPTKLKKVGDSGHYRYEPVMPKLT-RRKTTVGTRGYMAPEIISGKLV---KRDQRPGYTFAVDFWSLGVTMFELMCGFQPFSMHSNGNFFQEVANEEIFRLSPRTQHKI-ELQKMAQGVTFPLHLTRNAQDFLKRLLEVSPEHRLGCNSEKGFAEFMEHSFFETIDWEKLMMKHIDSKFKPALP--LLSDKKIYNSYEHMMSHFDMRDKDFIRHD--WYADPDPEMQKHFDTWDFISQYTLRAELGIAKELD 600          
The following BLAST results are available for this feature:
BLAST of mRNA_C-australica_Contig_984.3.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FP09_ECTSI2.480e-16146.05Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A7S1U415_9STRA9.730e-13240.51Hypothetical protein n=1 Tax=Phaeomonas parva TaxI... [more]
A0A835ZAC1_9STRA2.320e-12338.72Kinase-like domain-containing protein n=1 Tax=Trib... [more]
A0A8K1C8Y3_PYTOL8.690e-11739.14Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
F0WFN3_9STRA3.990e-11137.41Protein kinase putative n=2 Tax=Albugo TaxID=65356... [more]
D8LEF7_ECTSI8.380e-11136.35Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
K3X895_GLOUD8.800e-11137.72Uncharacterized protein n=1 Tax=Globisporangium ul... [more]
A0A0P1B3D1_PLAHL5.260e-10937.86Agc protein kinase n=1 Tax=Plasmopara halstedii Ta... [more]
H3GJZ7_PHYRM7.390e-10837.65Uncharacterized protein n=20 Tax=Peronosporaceae T... [more]
A0A3R7KWF9_9STRA1.280e-10738.53Uncharacterized protein n=3 Tax=Phytophthora kerno... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-australica_Contig_984contigC-australica_Contig_984:10532..16530 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Chrysoparadoxa australica CS_1217 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D7FP09
PFAMsPkinase,RGS
Model size2318
Max annot lvl2759|Eukaryota
KEGG koko:K00910,ko:K04688
KEGG Pathwayko01521,ko01522,ko04012,ko04062,ko04066,ko04140,ko04144,ko04150,ko04151,ko04152,ko04211,ko04212,ko04213,ko04340,ko04350,ko04371,ko04666,ko04714,ko04724,ko04740,ko04745,ko04910,ko04931,ko05032,ko05165,ko05200,ko05205,ko05210,ko05212,ko05221,ko05224,ko05225,ko05226,ko05231,map01521,map01522,map04012,map04062,map04066,map04140,map04144,map04150,map04151,map04152,map04211,map04212,map04213,map04340,map04350,map04371,map04666,map04714,map04724,map04740,map04745,map04910,map04931,map05032,map05165,map05200,map05205,map05210,map05212,map05221,map05224,map05225,map05226,map05231
Hectar predicted targeting categoryother localisation
Exons22
Evalue5.47e-164
EggNOG OGsKOG0598@1|root,KOG0598@2759|Eukaryota
Ec32 ortholog descriptionProtein kinase domain
Ec32 orthologEc-05_001850.1
EC2.7.11.1,2.7.11.15
Descriptionprotein serine/threonine kinase activity
Cds size1821
COG categoryH
BRITEko00000,ko00001,ko01000,ko01001,ko04147
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_C-australica_Contig_984.3.1prot_C-australica_Contig_984.3.1Chrysoparadoxa australica CS_1217polypeptideC-australica_Contig_984 10747..16248 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1682588851.417391-UTR-C-australica_Contig_984:10531..107461682588851.417391-UTR-C-australica_Contig_984:10531..10746Chrysoparadoxa australica CS_1217UTRC-australica_Contig_984 10532..10746 +
1682588851.7074778-UTR-C-australica_Contig_984:16248..165301682588851.7074778-UTR-C-australica_Contig_984:16248..16530Chrysoparadoxa australica CS_1217UTRC-australica_Contig_984 16249..16530 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1682588851.4286873-CDS-C-australica_Contig_984:10746..108211682588851.4286873-CDS-C-australica_Contig_984:10746..10821Chrysoparadoxa australica CS_1217CDSC-australica_Contig_984 10747..10821 +
1682588851.437987-CDS-C-australica_Contig_984:10973..110211682588851.437987-CDS-C-australica_Contig_984:10973..11021Chrysoparadoxa australica CS_1217CDSC-australica_Contig_984 10974..11021 +
1682588851.4476218-CDS-C-australica_Contig_984:11250..113521682588851.4476218-CDS-C-australica_Contig_984:11250..11352Chrysoparadoxa australica CS_1217CDSC-australica_Contig_984 11251..11352 +
1682588851.4665637-CDS-C-australica_Contig_984:11632..117131682588851.4665637-CDS-C-australica_Contig_984:11632..11713Chrysoparadoxa australica CS_1217CDSC-australica_Contig_984 11633..11713 +
1682588851.4865873-CDS-C-australica_Contig_984:11781..118891682588851.4865873-CDS-C-australica_Contig_984:11781..11889Chrysoparadoxa australica CS_1217CDSC-australica_Contig_984 11782..11889 +
1682588851.5019763-CDS-C-australica_Contig_984:12031..121571682588851.5019763-CDS-C-australica_Contig_984:12031..12157Chrysoparadoxa australica CS_1217CDSC-australica_Contig_984 12032..12157 +
1682588851.5119677-CDS-C-australica_Contig_984:12411..124861682588851.5119677-CDS-C-australica_Contig_984:12411..12486Chrysoparadoxa australica CS_1217CDSC-australica_Contig_984 12412..12486 +
1682588851.5247967-CDS-C-australica_Contig_984:12677..127591682588851.5247967-CDS-C-australica_Contig_984:12677..12759Chrysoparadoxa australica CS_1217CDSC-australica_Contig_984 12678..12759 +
1682588851.541287-CDS-C-australica_Contig_984:12883..129691682588851.541287-CDS-C-australica_Contig_984:12883..12969Chrysoparadoxa australica CS_1217CDSC-australica_Contig_984 12884..12969 +
1682588851.5520282-CDS-C-australica_Contig_984:13109..131521682588851.5520282-CDS-C-australica_Contig_984:13109..13152Chrysoparadoxa australica CS_1217CDSC-australica_Contig_984 13110..13152 +
1682588851.562225-CDS-C-australica_Contig_984:13220..133211682588851.562225-CDS-C-australica_Contig_984:13220..13321Chrysoparadoxa australica CS_1217CDSC-australica_Contig_984 13221..13321 +
1682588851.5730429-CDS-C-australica_Contig_984:13480..135651682588851.5730429-CDS-C-australica_Contig_984:13480..13565Chrysoparadoxa australica CS_1217CDSC-australica_Contig_984 13481..13565 +
1682588851.5872211-CDS-C-australica_Contig_984:13787..138361682588851.5872211-CDS-C-australica_Contig_984:13787..13836Chrysoparadoxa australica CS_1217CDSC-australica_Contig_984 13788..13836 +
1682588851.604997-CDS-C-australica_Contig_984:13924..139881682588851.604997-CDS-C-australica_Contig_984:13924..13988Chrysoparadoxa australica CS_1217CDSC-australica_Contig_984 13925..13988 +
1682588851.6156666-CDS-C-australica_Contig_984:14263..143741682588851.6156666-CDS-C-australica_Contig_984:14263..14374Chrysoparadoxa australica CS_1217CDSC-australica_Contig_984 14264..14374 +
1682588851.6260238-CDS-C-australica_Contig_984:14503..145991682588851.6260238-CDS-C-australica_Contig_984:14503..14599Chrysoparadoxa australica CS_1217CDSC-australica_Contig_984 14504..14599 +
1682588851.6360025-CDS-C-australica_Contig_984:14799..149251682588851.6360025-CDS-C-australica_Contig_984:14799..14925Chrysoparadoxa australica CS_1217CDSC-australica_Contig_984 14800..14925 +
1682588851.6459682-CDS-C-australica_Contig_984:15148..151891682588851.6459682-CDS-C-australica_Contig_984:15148..15189Chrysoparadoxa australica CS_1217CDSC-australica_Contig_984 15149..15189 +
1682588851.6558778-CDS-C-australica_Contig_984:15471..155381682588851.6558778-CDS-C-australica_Contig_984:15471..15538Chrysoparadoxa australica CS_1217CDSC-australica_Contig_984 15472..15538 +
1682588851.6736696-CDS-C-australica_Contig_984:15773..158551682588851.6736696-CDS-C-australica_Contig_984:15773..15855Chrysoparadoxa australica CS_1217CDSC-australica_Contig_984 15774..15855 +
1682588851.6857617-CDS-C-australica_Contig_984:15985..160501682588851.6857617-CDS-C-australica_Contig_984:15985..16050Chrysoparadoxa australica CS_1217CDSC-australica_Contig_984 15986..16050 +
1682588851.6983304-CDS-C-australica_Contig_984:16140..162481682588851.6983304-CDS-C-australica_Contig_984:16140..16248Chrysoparadoxa australica CS_1217CDSC-australica_Contig_984 16141..16248 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_C-australica_Contig_984.3.1

>prot_C-australica_Contig_984.3.1 ID=prot_C-australica_Contig_984.3.1|Name=mRNA_C-australica_Contig_984.3.1|organism=Chrysoparadoxa australica CS_1217|type=polypeptide|length=607bp
MGLWPSKKVHLSGPKTEHSRSVWRKEAGHHGEAKDAWLIPKWHAAPSECL
ELLDMLNTPVGQHHLGAYARQTHTQELLFIWADLSEFRTIPSKDFMLKKA
KQIYHKYVSTKAMQTLTFIPTGLRNYVANKIFVAEGDLNAMDQDFLAQLM
QSTLLEIHKTIYSAFRLEEDRYNAYVSDLRENYNQIREGDFEYFEKLGEG
AFGVVVRCRKKSTGEDLAMKIQIKTALIKSMHGQASKLDNERRIFAACNH
PFILQMKYAFTTPQHAIIVTNLVPTGTLQDAIDTSPDKRLSHERARLYTA
EISLALHHLHDLGLIYRDLKPRNVMLGPDGHIQLADMGGVGDGAGNITRG
QNQAVKAETISRRRTFRRRSIMGTQGYMAPEMVRLMGNQQANQSIGYSAA
VDWWSLGVTCYKMLTGARPFEMAPRSRLKKLAGRSRSNTDELAKVTAPVH
YPDYLENDAVNLLRALLAHNEKDRLGSGPKGWEHLKEHAFFKGLDWDRLS
DKLIPAPFIPEMPENSYSDSDEGTTYAHMIKLLEDHERMKITHRKHFNSE
PSAEQQKLFLNWHYINASTLKLEMGIGNEMEALHTSYKAQQLMGPSQGSP
DSQRWS*
back to top

mRNA from alignment at C-australica_Contig_984:10532..16530+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_C-australica_Contig_984.3.1 ID=mRNA_C-australica_Contig_984.3.1|Name=mRNA_C-australica_Contig_984.3.1|organism=Chrysoparadoxa australica CS_1217|type=mRNA|length=5999bp|location=Sequence derived from alignment at C-australica_Contig_984:10532..16530+ (Chrysoparadoxa australica CS_1217)
CGGACCGACCCCGCTGTCCCACGCTAGGGGGAGACACTACGAGGAGGATC TGTTCTCTGGCTCTGTTGTGTTGTTGCTCTGTCAAGAGTGGGGATTCACT CCCTCTTCTCGTACGCTGCCTCAGCGCCCTACCCCTATTATGGGCGCGAG AGCGAATCCCATGGGGTCTGTGAGAGACTGAGGAGCGGAGAGAAGCCAGA GCTCTAGGCAGCAGCATGGGGCTCTGGCCCAGCAAGAAGGTGCACCTGTC GGGCCCCAAAACTGAGCATAGCCGCTCGGTCTGGAGGAAGGTGAGTTAAT GACAATAAGACAACAGAGCAAATCCAGGATTAGGGGCAGACCTGCTGGTA GGAAAGGCGAGGCAGAATGAAGATGATGAGATGAGAAGGTCAAAAGTGGA GGCACACAAACTCACACCAGTGCCCCACCCCACATCCTCCAGGAGGCTGG CCACCACGGCGAAGCGAAAGATGCCTGGCTTATACCAAAGGTAACGCAGC TACTGCACCATGGCGTCTACGATTTAGTACATCATCCTTCAGTCTCTGTG TCACCGGCTGGCTCACTTTCGGAACCAGCTGTGCTACCAGACAAACATTA ACCCCCCCTTGCCATAACTGGGCCTAGCCAAGCATTGCCTTCTCCAGCTC GGCTCCATTCAGCCCCCTATGGCCTGCTGGACCTCACTGTTGTTCAAACT CTTCAAACTCTGCCTGCAGTGGCATGCTGCCCCGTCAGAGTGTCTTGAGC TGCTGGACATGCTCAACACGCCGGTGGGGCAGCATCACCTCGGTGCTTAC GCTAGGCAGACACATACGCAGGTAGGCACTGTTTCCAAGAGCTAGTGCAA ACTTATCCACCGCCTCACTAAATCAACACCTCACCAACTACGAGTTACCG TGCAGTCTTACCACATGCATTAGCTCATTAGCTCACACACATTAGGGGTG CAGCACACCACAACACTTCATGCGCTCCTCCTTCTTTGCTCCATCTCATT TATACCTGATGATTGATCTTTTTGAGCCTCAGCCTCAGCCTCAGCCTCAG CCTCAGCTAGCTGACTTGGGAGATGCACTAACCAACCTATCATGCCCCCA GGAGCTCTTGTTCATCTGGGCTGATCTCTCCGAGTTCCGCACTATTCCTT CTAAAGACTTCATGCTCAAGAAGGCCAAGCAGGTTCCCTAATTTTTTGTA GCCCCGCTAGCTGGGAACGATCATCCCTCACGCATCCCATTTTCCCCCAG ATATATCACAAGTATGTCTCCACGAAGGCAATGCAGACCCTGACATTCAT CCCAACTGGGCTTCGCAACTATGTGGCGAATAAAATCTTCGTTGCTGAAG GCGACTTGGTGAGATTGCTCCTGCATAGCCTAACAGCCCAAGCATGCTTC AAGCTGAAGCTGATGCTGTCAAGCTGTTCTTACACCACCCAAGGTGGCCT GACTTTGACACTCCACGCTCACCGCAGCCTCCTACCTCACCTCACCTCAG AACGCCATGGACCAAGACTTCTTGGCGCAGCTGATGCAGAGCACGCTGCT GGAGATACACAAGACCATCTATTCAGCCTTCAGATTAGAGGAGGATCGGT ACAATGCTTACGTCAGTGACTTGCGGGTAAGAGCACGAGTGAGAGGTCCA CTTAAGAGTACGAGTGAGAGCTCCACTTAAGAGCACGAGTGAGAGCTAGC TCCACGTGTCTTTCTCTTTACCAACATAAGAGCTATGTGTGCCTGGACAT TTACTTATCCCCGGACCCAAAGCGTTGGTGCTGTGTGATGAACGAATGTG TCGGTGCTCACTCTGCTGCATGCTTCATGGCAGACCCACGGCTAGCTCCC TCTCATGCTGCCTCTGCAACGCCCCCACAGGAGAACTACAACCAGATCCG GGAGGGCGATTTTGAGTATTTTGAGAAGCTCGGTGAAGGGGCTTTTGGTG TTGTTGTGAGTAACCAGTTGCCAGTGCGTGGAGTGTTCCAACCCCCAAGC TGCAACCAACAAAGCAAACCTGCAAAACCCGCGCCCTGTACAATCCGGCG CAGTGCATGTACCTTGCCCTGCATTCCCTGGGGGCGCGAACTTGGTTCTT TTCATAAGTGCAGAGGTTGAGCTGATTCGGCACATCTGCCTGGCAGGTGC GTTGCCGGAAGAAGTCAACAGGGGAGGACTTGGCCATGAAGATACAGATT AAGACTGCTCTGATAAAGAGCATGCACGGTATGATTGTAGAGGTCGCCCC CTGTGCTGGGCTTATGTTTCACTGCCTCAATCTATACCCTGGGATGCCCT AATCTGCACTTGGCTGACGTAAGTTTGCGCTCTTCCACCCATGGAACATC AGGCCAAGCATCTAAGTTAGACAATGAACGCCGCATATTTGCAGCCTGCA ATCACCCCTTCATACTGCAGATGAAGTATGCTTTCACGGTAAGGCAGGCA CATTATTTGTGTTTTCTTTGTGGGTCCCTTGGGCGTAATACCCTGTAGCC CTTCTGTTACATGGCAGCAGCAGCAGAAGCAGCCCTTAGTCTTAGCAACT CATTGACCCCAATCTCTTGGTTCCTCAGACACCGCAGCATGCCATCATTG TTACCAACCTGGTGCCAACAGGTAAGAGGTCACATCAGTCTCTCCCTCAT CCCGGCCTCCAACTTACTAGTTGCATCTTGCCTTCACAGGGACACTGCAG GACGCCATTGATACCTCCCCAGACAAAAGGCTCAGCCACGAGAGGGCGCG GCTGTACACAGCGGAAATCAGCTTGGCATTGCATCACTTGGTGAGCAAAC GAACATCACAACAACAAAAGAATGATAAATAAGCAAACATCGGCGGCCAG CCCATCATTACGTCATTTGGTGACCATCTTGCTGCTGTTGCCTCATCACC CCTCATTAAGCCAGCACTTATGCCTCGCTTGACGCAATTCTTATTATAGC ATGATCTGGGGCTCATCTACCGGGACCTCAAGCCCCGTAACGTGATGCTT GGCCCAGATGGCCACATCCAATTAGCTGACATGGGTGAGTAGCTCTCGCT CATCTCACTAACACACCAGTCATCAGTTTGCTGACCCCCCACACCCCGCA AACTAAATAGTCAAAGCCCTCTCTCTCTCTGTCTCTCTCTCTCTCTGTGT GTGTGTATGCCCTTTTGACACGCTCAACACTGGCTGCCCTGTGATGGTAG AGAAAGCCCTGCGCTATGCCTTAACTCCCTTCCCACTGCTTTTTTTTTCT TCACAGGTGGGGTGGGGGATGGTGCCGGGAACATCACAAGAGGGCAAAAC CAAGCGTAAGCTTAAGCTTATTTCCCTGCAAAGAAAGATTTGCTTCTCCT TTCTCACTTGCACTCCCTCTCATGCATCGTGATCATGATGCAGGGTCAAG GCAGAGACGATCAGCAGGCGGAGAACATTCAGAAGGAGAAGCATCATGGG CACACAGGTGGGCGGGTGTAGGTGGCATTTGTTTTTGTTTTTGTTTTGCG GTGAAGTTTACGTGCATGCGTTGCTCATGACACCACATCTTGATGAGCAA TCAATACTGGCTGTCTTACACGGCATGATAATCCAAAGATTTCGCCAGTG AGCAAGGAGGCTTGATCTAGCTTTCTCTGACTCCTCCCAGCCCTTCCTGG GTCTGTCAGTAGCCTTTCCCAGGCATCCCTCACCGGGAGGCTCGAACCCA TCCACTGCTGACTCTCCCCACCCTCTACACAGGGATACATGGCCCCTGAA ATGGTCAGGCTGATGGGCAACCAGCAAGCAAACCAAAGTATAGGATATAG TGCCGCTGTTGACTGGTGGAGCCTTGGTGTAACGTGCTACAAGGTTAGTT ACACCAACTGACTTCATGTGCTCCATGTGCTCCATGTGCTCCAACCTTGG TCGCCTTCATCCAGGCCGTGACCTGACTCTACACCTTTCCTCTCCCCTCA CTTACCGCTGACTGCCTTACAGATGCTGACTGGGGCACGGCCCTTTGAGA TGGCTCCACGGAGCCGGTTGAAAAAGCTGGCGGGCAGATCTAGATCTAAT ACTGATGAGCTAGCCAAGGTTGGTAGATCACAACACTCCTCTCCTCTTCA CTCCTCTTCTTTATCTTTAGCCTGGTGCACCTCAACGTATAGGGGTCACA TTCCTTCATGCTCCACTCCACTCCATTCTCCACTCCATACCTGCCGTCTT GCAAGCTGGTGGGGGGTGCTGCCCTCCACTTCTTGTTCTGGGGAGCTCAC CTCCATCACTCACCACAGGTGACGGCTCCGGTGCACTACCCTGACTACCT GGAGAATGATGCGGTCAACCTGTTGCGGGCTCTGCTTGCACACAATGAGA AGGATAGGCTAGGGTCAGGCCCCAAGGGATGGGAGCATCTAAAGGTAAAG GCGTGTGGCTTCTTATTTTTCTTCTACTACTTAAAGCTCCAATTTAGGAT AACTAACTGTCTAAAGGTGGGATGCGTAAGAGCAAGAGAGGCTGTTCTCA GTCCACATTCCTTGCTACCTTCTTCTGTGCACTACTTCCGTCCTTACCGT CCAGCTGCTAGTATGCTCACTCCGTCATTTGTTACTTAATTTCTCTCTTT CGCTCCCTCTCCCGCAGGAGCATGCCTTCTTTAAGGGTTTGGATTGGGAC AGACTCAGGTGCAAATCCATCCGTCTTGTGGACTGTGTAGTGTAGTTTAG TGCAGTGCATTTGCATTCCTCCGACTTACACAAGAAGCTTCATTGGTGTA AGGATTGGGGCTTGGGGCTTGATTGTGGGGTATTGTGAGAAGTATCAGGC TGGGCACCAGGCTTTGACTATTTGACTTGCAATGGATTGCTTATGCCGTC CTGCAAGCAACACCCACTCACTAACGATTTAGTCCGAGCTGACCCTGACC GCTGCTGCTGCTGCTACCATGTGATGCTTCCCAACAACAGTGATAAGCTG ATCCCGGCTCCTTTTATTCCGGAGATGCCGGAAAATTCTTATTCTGATAG TGATGAGGTGAGTTGACTTGCAGCAGCAGCAGCATTATCACTGGCACTCC CACGCTCAGCTCAAGCAGCACAACAGCTAAAAAAGCGTGGAATTCTATTC ACCTGTGCTTCCGCCAACGAGTGGTTGGTTGCCAGTGGTTGCTCGCAGAT GCTCCTGGCACGGCGTTGGGAGTCCTTGGGTTGAGCGAGCGAGATAGGCT GCATCCACTCTAACCGTTTGCTTGCTCTCTCGCCTTCCGCAGGGGACGAC ATATGCTCACATGATTAAGCTGCTAGAAGACCACGAGCGAATGAAGATTA CGCATCGGAAACACTTCAACTCAGGTGCTGTGCTGTGCTGTGCTGCTCTG CAGTTTCCATCTGCTTACTACTTGCTTCTCACACTGTCATGTTAATGTTA CTAACCAGCAGCAATTCGCACTCCTACGCCTGACCCTCCTTTCATCACCC CCAGAGCCCTCGGCGGAGCAGCAGAAGCTGTTTCTGAATTGGCACTACAT CAACGCTTCCACGCTCAAGGTGAGGGGGAGCTCTGGCGCGGGGAGCAGGC TGGTTGATCCCTGAGCACGCTAGCTGCTAACTAACCCCACGCCTATATAC ACCTCACAGCTTGAGATGGGCATCGGGAACGAAATGGAGGCTCTGCACAC GAGCTATAAGGCTCAGCAACTCATGGGGCCTTCTCAAGGTAGCCCAGATA GCCAGAGATGGAGTTGATATTTCTTTCGTTAGCCTTGACCTCGCTTGGCC TAATGGTTTGATGACCCGGGATATAGTAAGAGGGGATGGAATTAGTTCTG CTTTGTTTGGAAGAAAGCACTGAGTCGAAGGAATGCTGCACCCCTTATCA GGGTTATCAAGCATGCCTTGCGTGGTCCTTACCACTAAAATACATAACTC ATAGGCCATAACGTAACACAAACACCATACCACACAATGCTCTACAGGTC ATGATACCACACCATCATCACCGCCTCAGAGACTAGTCAGGGGCATGAG
back to top

Coding sequence (CDS) from alignment at C-australica_Contig_984:10532..16530+

>mRNA_C-australica_Contig_984.3.1 ID=mRNA_C-australica_Contig_984.3.1|Name=mRNA_C-australica_Contig_984.3.1|organism=Chrysoparadoxa australica CS_1217|type=CDS|length=1821bp|location=Sequence derived from alignment at C-australica_Contig_984:10532..16530+ (Chrysoparadoxa australica CS_1217)
ATGGGGCTCTGGCCCAGCAAGAAGGTGCACCTGTCGGGCCCCAAAACTGA
GCATAGCCGCTCGGTCTGGAGGAAGGAGGCTGGCCACCACGGCGAAGCGA
AAGATGCCTGGCTTATACCAAAGTGGCATGCTGCCCCGTCAGAGTGTCTT
GAGCTGCTGGACATGCTCAACACGCCGGTGGGGCAGCATCACCTCGGTGC
TTACGCTAGGCAGACACATACGCAGGAGCTCTTGTTCATCTGGGCTGATC
TCTCCGAGTTCCGCACTATTCCTTCTAAAGACTTCATGCTCAAGAAGGCC
AAGCAGATATATCACAAGTATGTCTCCACGAAGGCAATGCAGACCCTGAC
ATTCATCCCAACTGGGCTTCGCAACTATGTGGCGAATAAAATCTTCGTTG
CTGAAGGCGACTTGAACGCCATGGACCAAGACTTCTTGGCGCAGCTGATG
CAGAGCACGCTGCTGGAGATACACAAGACCATCTATTCAGCCTTCAGATT
AGAGGAGGATCGGTACAATGCTTACGTCAGTGACTTGCGGGAGAACTACA
ACCAGATCCGGGAGGGCGATTTTGAGTATTTTGAGAAGCTCGGTGAAGGG
GCTTTTGGTGTTGTTGTGCGTTGCCGGAAGAAGTCAACAGGGGAGGACTT
GGCCATGAAGATACAGATTAAGACTGCTCTGATAAAGAGCATGCACGGCC
AAGCATCTAAGTTAGACAATGAACGCCGCATATTTGCAGCCTGCAATCAC
CCCTTCATACTGCAGATGAAGTATGCTTTCACGACACCGCAGCATGCCAT
CATTGTTACCAACCTGGTGCCAACAGGGACACTGCAGGACGCCATTGATA
CCTCCCCAGACAAAAGGCTCAGCCACGAGAGGGCGCGGCTGTACACAGCG
GAAATCAGCTTGGCATTGCATCACTTGCATGATCTGGGGCTCATCTACCG
GGACCTCAAGCCCCGTAACGTGATGCTTGGCCCAGATGGCCACATCCAAT
TAGCTGACATGGGTGGGGTGGGGGATGGTGCCGGGAACATCACAAGAGGG
CAAAACCAAGCGGTCAAGGCAGAGACGATCAGCAGGCGGAGAACATTCAG
AAGGAGAAGCATCATGGGCACACAGGGATACATGGCCCCTGAAATGGTCA
GGCTGATGGGCAACCAGCAAGCAAACCAAAGTATAGGATATAGTGCCGCT
GTTGACTGGTGGAGCCTTGGTGTAACGTGCTACAAGATGCTGACTGGGGC
ACGGCCCTTTGAGATGGCTCCACGGAGCCGGTTGAAAAAGCTGGCGGGCA
GATCTAGATCTAATACTGATGAGCTAGCCAAGGTGACGGCTCCGGTGCAC
TACCCTGACTACCTGGAGAATGATGCGGTCAACCTGTTGCGGGCTCTGCT
TGCACACAATGAGAAGGATAGGCTAGGGTCAGGCCCCAAGGGATGGGAGC
ATCTAAAGGAGCATGCCTTCTTTAAGGGTTTGGATTGGGACAGACTCAGT
GATAAGCTGATCCCGGCTCCTTTTATTCCGGAGATGCCGGAAAATTCTTA
TTCTGATAGTGATGAGGGGACGACATATGCTCACATGATTAAGCTGCTAG
AAGACCACGAGCGAATGAAGATTACGCATCGGAAACACTTCAACTCAGAG
CCCTCGGCGGAGCAGCAGAAGCTGTTTCTGAATTGGCACTACATCAACGC
TTCCACGCTCAAGCTTGAGATGGGCATCGGGAACGAAATGGAGGCTCTGC
ACACGAGCTATAAGGCTCAGCAACTCATGGGGCCTTCTCAAGGTAGCCCA
GATAGCCAGAGATGGAGTTGA
back to top