mRNA_C-australica_Contig_9833.1.1 (mRNA) Chrysoparadoxa australica CS_1217

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_C-australica_Contig_9833.1.1
Unique NamemRNA_C-australica_Contig_9833.1.1
TypemRNA
OrganismChrysoparadoxa australica CS_1217 (Chrysoparadoxa australica CS_1217)
Homology
BLAST of mRNA_C-australica_Contig_9833.1.1 vs. uniprot
Match: A3UCU5_9PROT (NADH-quinone oxidoreductase subunit N n=3 Tax=Oceanicaulis TaxID=153232 RepID=A3UCU5_9PROT)

HSP 1 Score: 517 bits (1332), Expect = 1.520e-181
Identity = 273/284 (96.13%), Postives = 280/284 (98.59%), Query Frame = 1
Query:    1 LRASEAGLKYFVRGALSSGLLRYGASLVYGFSGSTAFDAIAVAAAEGGQNMGLLFGLVFVIAGLAFKVSAAPFHMWTPDVYEGAPTPVAAFFATAPKLAAMVLLARVLMEPFGPMTEQWQQVTMVMAVLSMAFGSFGALMQSNIKRLMGYSSIGNMGYVLVGLSAGTALGLWSVLFYMTLYVIGVAGAFAVILSMRRSEGMVERIEDLAGLSQTRPALAWSMTALMFSIGGMPFMIGFFGKLFVFYAAVQAGLIWLVILAVLFSTVSIAYYLRVIKVIWFDEPN 852
            LRASEAGLKYFV GALSSGLL YG+SLVYGFSGST+FDAIAVAAAEG QN+GLLFGLVFV+AGLAFKVSAAPFHMWTPDVYEGAPTPVAAFFATAPKLAAMVLLARVLMEPFGPMTEQWQQVTMVMAVLSMAFGSFGALMQSNIKRLMGYSSIGNMGYVLVGLSAGTALGLWSVLFYMTLYVIGVAGAFAVILSMRRSEGMVERIEDL+GLSQTRPALAWSMTALMFSIGGMPFMIGFFGKLFVFYAAVQAGLIWLVILAV+FST+SIAYYLRVIKVIWFDEP 
Sbjct:  157 LRASEAGLKYFVLGALSSGLLLYGSSLVYGFSGSTSFDAIAVAAAEGSQNLGLLFGLVFVVAGLAFKVSAAPFHMWTPDVYEGAPTPVAAFFATAPKLAAMVLLARVLMEPFGPMTEQWQQVTMVMAVLSMAFGSFGALMQSNIKRLMGYSSIGNMGYVLVGLSAGTALGLWSVLFYMTLYVIGVAGAFAVILSMRRSEGMVERIEDLSGLSQTRPALAWSMTALMFSIGGMPFMIGFFGKLFVFYAAVQAGLIWLVILAVIFSTISIAYYLRVIKVIWFDEPT 440          
BLAST of mRNA_C-australica_Contig_9833.1.1 vs. uniprot
Match: A0A5M6ZPL0_9PROT (NADH-quinone oxidoreductase subunit N n=1 Tax=Alkalicaulis satelles TaxID=2609175 RepID=A0A5M6ZPL0_9PROT)

HSP 1 Score: 456 bits (1172), Expect = 2.750e-157
Identity = 229/284 (80.63%), Postives = 261/284 (91.90%), Query Frame = 1
Query:    1 LRASEAGLKYFVRGALSSGLLRYGASLVYGFSGSTAFDAIAVAAAEGGQNMGLLFGLVFVIAGLAFKVSAAPFHMWTPDVYEGAPTPVAAFFATAPKLAAMVLLARVLMEPFGPMTEQWQQVTMVMAVLSMAFGSFGALMQSNIKRLMGYSSIGNMGYVLVGLSAGTALGLWSVLFYMTLYVIGVAGAFAVILSMRRSEGMVERIEDLAGLSQTRPALAWSMTALMFSIGGMPFMIGFFGKLFVFYAAVQAGLIWLVILAVLFSTVSIAYYLRVIKVIWFDEPN 852
            LRASEAGLKYFV GALSSGLL YGASL+YGF+GST FDAIA AA+E G  +GLLFGLVF+++GLAFK+SA PFHMWTPDVYEGAPTPVAAFFATAPKLAAMVL+ARV+ EPF PMTE+W+Q+ +V+A+LSM  G+FGALMQSNIKRLMGYSSIGNMGY LVGL+AGTALGLWSVLFYMTLY++GV GAFAVILSMRR+EGMVERI+DL GLS+T PAL WSMTALMFSIGGMPF++GFFGKLFVFYAA +AGL WL+++ ++FS VSIAYYLRV+KVIWFDEP 
Sbjct:  157 LRASEAGLKYFVLGALSSGLLLYGASLIYGFAGSTGFDAIAAAASEDGAKIGLLFGLVFLLSGLAFKISAVPFHMWTPDVYEGAPTPVAAFFATAPKLAAMVLIARVVYEPFAPMTEEWRQIIVVLAILSMGVGAFGALMQSNIKRLMGYSSIGNMGYALVGLAAGTALGLWSVLFYMTLYIVGVLGAFAVILSMRRAEGMVERIDDLKGLSKTHPALGWSMTALMFSIGGMPFLVGFFGKLFVFYAAAEAGLWWLMVIGLVFSAVSIAYYLRVVKVIWFDEPE 440          
BLAST of mRNA_C-australica_Contig_9833.1.1 vs. uniprot
Match: A0A2U2BTA9_9PROT (NADH-quinone oxidoreductase subunit N n=1 Tax=Marinicauda salina TaxID=2135793 RepID=A0A2U2BTA9_9PROT)

HSP 1 Score: 455 bits (1171), Expect = 4.470e-157
Identity = 230/284 (80.99%), Postives = 264/284 (92.96%), Query Frame = 1
Query:    1 LRASEAGLKYFVRGALSSGLLRYGASLVYGFSGSTAFDAIAVAAAEGGQNMGLLFGLVFVIAGLAFKVSAAPFHMWTPDVYEGAPTPVAAFFATAPKLAAMVLLARVLMEPFGPMTEQWQQVTMVMAVLSMAFGSFGALMQSNIKRLMGYSSIGNMGYVLVGLSAGTALGLWSVLFYMTLYVIGVAGAFAVILSMRRSEGMVERIEDLAGLSQTRPALAWSMTALMFSIGGMPFMIGFFGKLFVFYAAVQAGLIWLVILAVLFSTVSIAYYLRVIKVIWFDEPN 852
            LRASEAGLKYFV GALSSGLL YGASL+YGF+GST+F+AIAVAAA    ++GLLFG+VF++AGLAFKVSAAPFHMWTPDVYEGAPTPV AFFATAPKLAAM LLARV+ +PF PM E+W+QV +V+A+LSMAFG+FGALMQ+NIKRLMGYSSIGN+GY LVGLSAGTA+G+WSVL YMTLYVIGVAGAF VILSMRRSEGMVERIEDLAGLSQTRP ++W+MTA++FSIGGMPF++GFF KLFVFYAAV+AGL+WL ++ VLFSTVSIAYYL+VIKV+WFDEP 
Sbjct:  157 LRASEAGLKYFVLGALSSGLLLYGASLIYGFAGSTSFEAIAVAAASESGSVGLLFGMVFLLAGLAFKVSAAPFHMWTPDVYEGAPTPVTAFFATAPKLAAMALLARVVSDPFAPMVEEWRQVVIVLAILSMAFGAFGALMQTNIKRLMGYSSIGNVGYALVGLSAGTAIGVWSVLLYMTLYVIGVAGAFGVILSMRRSEGMVERIEDLAGLSQTRPGMSWAMTAVLFSIGGMPFLVGFFAKLFVFYAAVEAGLVWLAVVGVLFSTVSIAYYLKVIKVMWFDEPT 440          
BLAST of mRNA_C-australica_Contig_9833.1.1 vs. uniprot
Match: UPI001EDE86EB (NADH-quinone oxidoreductase subunit NuoN n=1 Tax=Shewanella sp. ER-Te-42B-Light TaxID=2872342 RepID=UPI001EDE86EB)

HSP 1 Score: 442 bits (1136), Expect = 8.000e-152
Identity = 221/283 (78.09%), Postives = 259/283 (91.52%), Query Frame = 1
Query:    1 LRASEAGLKYFVRGALSSGLLRYGASLVYGFSGSTAFDAIAVAAAEGGQNMGLLFGLVFVIAGLAFKVSAAPFHMWTPDVYEGAPTPVAAFFATAPKLAAMVLLARVLMEPFGPMTEQWQQVTMVMAVLSMAFGSFGALMQSNIKRLMGYSSIGNMGYVLVGLSAGTALGLWSVLFYMTLYVIGVAGAFAVILSMRRSEGMVERIEDLAGLSQTRPALAWSMTALMFSIGGMPFMIGFFGKLFVFYAAVQAGLIWLVILAVLFSTVSIAYYLRVIKVIWFDEP 849
            LRASEAGLKYF+ GALSSGLL YGASL+YGF+G+T FDAIA AA E G  +GLLFGLVF+++GLAFK+SAAPFHMWTPDVYEGAPTPVAAFFATAPKLAAM+L+ARVL EPF  MT++W+Q+ +V+AVLSM  G+ GALMQSNIKRLMGYSSIGNMGY LVGL+AGTALGLW+VLFYMTLYV+GV GAFAVILSMRR+EGMVE+++DL GL+++ P+L WSMTALMFSIGGMPF++GFFGKLFVFYAA +AGL WL+++ ++FS VSIAYYLRV+KVIWFDEP
Sbjct:  157 LRASEAGLKYFMLGALSSGLLLYGASLIYGFAGATGFDAIASAAGEDGAKIGLLFGLVFLVSGLAFKISAAPFHMWTPDVYEGAPTPVAAFFATAPKLAAMILIARVLYEPFAAMTDEWRQIIVVLAVLSMGVGALGALMQSNIKRLMGYSSIGNMGYALVGLAAGTALGLWAVLFYMTLYVVGVLGAFAVILSMRRAEGMVEQVDDLKGLAKSHPSLGWSMTALMFSIGGMPFLVGFFGKLFVFYAAAEAGLWWLMVIGLVFSAVSIAYYLRVVKVIWFDEP 439          
BLAST of mRNA_C-australica_Contig_9833.1.1 vs. uniprot
Match: A0A3T0EBH3_9PROT (NADH-quinone oxidoreductase subunit N n=4 Tax=Maricaulaceae TaxID=2800061 RepID=A0A3T0EBH3_9PROT)

HSP 1 Score: 426 bits (1096), Expect = 1.100e-145
Identity = 220/284 (77.46%), Postives = 253/284 (89.08%), Query Frame = 1
Query:    1 LRASEAGLKYFVRGALSSGLLRYGASLVYGFSGSTAFDAIAVAAAEGGQNMGLLFGLVFVIAGLAFKVSAAPFHMWTPDVYEGAPTPVAAFFATAPKLAAMVLLARVLMEPFGPMTEQWQQVTMVMAVLSMAFGSFGALMQSNIKRLMGYSSIGNMGYVLVGLSAGTALGLWSVLFYMTLYVIGVAGAFAVILSMRRSEGMVERIEDLAGLSQTRPALAWSMTALMFSIGGMPFMIGFFGKLFVFYAAVQAGLIWLVILAVLFSTVSIAYYLRVIKVIWFDEPN 852
            LRASEAGLKYFV GALSSGLL YGASLVYGF+GST F AIA+AA     ++GL+FGLVFV++GLAFK+SAAPFHMWTPDVYEGAPTPVAAFFATAPKLAAMVLL RVLMEPFG M++QWQQ+T+++A+LSM  GS GAL+Q+NIKRLM YSSIGNMGY LVGLSA +   +W+VL YMTLYVIGVAGAF VILSMRR+EGMVERIEDLAGLS++RP LA + T L+ SIGGMPF++GFFGKLFVFYAAVQAGL+WLV+LA +FSTVSIAYYL ++K +WFDEP 
Sbjct:  159 LRASEAGLKYFVLGALSSGLLLYGASLVYGFAGSTEFGAIALAAEN--PSVGLIFGLVFVVSGLAFKISAAPFHMWTPDVYEGAPTPVAAFFATAPKLAAMVLLIRVLMEPFGAMSDQWQQITIILAILSMGIGSLGALLQTNIKRLMAYSSIGNMGYALVGLSAASEAAVWAVLLYMTLYVIGVAGAFGVILSMRRAEGMVERIEDLAGLSKSRPGLALAFTGLLLSIGGMPFLVGFFGKLFVFYAAVQAGLVWLVVLAGIFSTVSIAYYLMILKRVWFDEPT 440          
BLAST of mRNA_C-australica_Contig_9833.1.1 vs. uniprot
Match: A0A550KKV6_9PROT (NADH-quinone oxidoreductase subunit N n=1 Tax=Glycocaulis profundi TaxID=2518983 RepID=A0A550KKV6_9PROT)

HSP 1 Score: 422 bits (1085), Expect = 4.800e-144
Identity = 219/284 (77.11%), Postives = 253/284 (89.08%), Query Frame = 1
Query:    1 LRASEAGLKYFVRGALSSGLLRYGASLVYGFSGSTAFDAIAVAAAEGGQNMGLLFGLVFVIAGLAFKVSAAPFHMWTPDVYEGAPTPVAAFFATAPKLAAMVLLARVLMEPFGPMTEQWQQVTMVMAVLSMAFGSFGALMQSNIKRLMGYSSIGNMGYVLVGLSAGTALGLWSVLFYMTLYVIGVAGAFAVILSMRRSEGMVERIEDLAGLSQTRPALAWSMTALMFSIGGMPFMIGFFGKLFVFYAAVQAGLIWLVILAVLFSTVSIAYYLRVIKVIWFDEPN 852
            LRASEAGLKYFV GALSSGLL YG+SLVYGF+GST FDAIA AAA    N+GL+FGLVFVI+GLAFK+SAAPFHMWTPDVYEGAPTPV AFFATAPKLAAM LLARVLMEPFGPM ++W+QV MV+AVLSM  G+FGALMQ+NIKRLMGYSSIGN+GY+LVGL+AGT  G+W+VL YMTLYV  V GAF VILSMRRSEGMVERIEDL+GL++TRP L ++MT L+FSIGGMP ++GFFGKL VF AAVQAGL+ LVI+A LFS VS+AYY+++++V+WFDEP 
Sbjct:  157 LRASEAGLKYFVLGALSSGLLLYGSSLVYGFAGSTNFDAIATAAAAD-ANVGLIFGLVFVISGLAFKISAAPFHMWTPDVYEGAPTPVVAFFATAPKLAAMALLARVLMEPFGPMVDEWRQVVMVLAVLSMGIGAFGALMQTNIKRLMGYSSIGNIGYMLVGLAAGTQAGVWAVLLYMTLYVFAVVGAFGVILSMRRSEGMVERIEDLSGLAKTRPGLGYAMTGLLFSIGGMPPLVGFFGKLAVFVAAVQAGLVPLVIIAALFSAVSMAYYIKIVRVMWFDEPK 439          
BLAST of mRNA_C-australica_Contig_9833.1.1 vs. uniprot
Match: A0A4S2HEE0_9PROT (NADH-quinone oxidoreductase subunit N n=1 Tax=Marinicauda pacifica TaxID=1133559 RepID=A0A4S2HEE0_9PROT)

HSP 1 Score: 419 bits (1076), Expect = 1.190e-142
Identity = 211/283 (74.56%), Postives = 247/283 (87.28%), Query Frame = 1
Query:    4 RASEAGLKYFVRGALSSGLLRYGASLVYGFSGSTAFDAIAVAAAEGGQNMGLLFGLVFVIAGLAFKVSAAPFHMWTPDVYEGAPTPVAAFFATAPKLAAMVLLARVLMEPFGPMTEQWQQVTMVMAVLSMAFGSFGALMQSNIKRLMGYSSIGNMGYVLVGLSAGTALGLWSVLFYMTLYVIGVAGAFAVILSMRRSEGMVERIEDLAGLSQTRPALAWSMTALMFSIGGMPFMIGFFGKLFVFYAAVQAGLIWLVILAVLFSTVSIAYYLRVIKVIWFDEPN 852
            RASEAGLKYFV GALSSGLL YGASLVYGF+G T+F AIA AA     ++GLLFGLVF+++GLAFKVSAAPFHMWTPDVYEGAPTPVAAFFATAPKLAAMVL+ARVL EPF  M +QWQQ+ +V+A+LSM  G+FGALMQSNIKRLM YSSI NMGYVLVGL++GT +G+W+VL YMTLY++GVAG F VILSMRRSEGMVER+EDL+GL+QT P L  ++T L+ SIGGMPF++GFFGKLFVFYAAV+AGLIWL ++  LFS VSI+YYL ++K +WFDEP 
Sbjct:  159 RASEAGLKYFVLGALSSGLLLYGASLVYGFAGGTSFAAIAAAAESDPDSLGLLFGLVFLLSGLAFKVSAAPFHMWTPDVYEGAPTPVAAFFATAPKLAAMVLIARVLTEPFAAMADQWQQIVIVLAILSMGIGAFGALMQSNIKRLMAYSSIANMGYVLVGLASGTQIGVWAVLLYMTLYIVGVAGTFGVILSMRRSEGMVERVEDLSGLAQTNPGLGLAITGLLLSIGGMPFLVGFFGKLFVFYAAVEAGLIWLAVVGALFSIVSISYYLAILKRVWFDEPR 441          
BLAST of mRNA_C-australica_Contig_9833.1.1 vs. uniprot
Match: A0A4S2GWC9_9PROT (NADH-quinone oxidoreductase subunit N n=1 Tax=Marinicauda algicola TaxID=2029849 RepID=A0A4S2GWC9_9PROT)

HSP 1 Score: 416 bits (1070), Expect = 9.630e-142
Identity = 210/283 (74.20%), Postives = 245/283 (86.57%), Query Frame = 1
Query:    4 RASEAGLKYFVRGALSSGLLRYGASLVYGFSGSTAFDAIAVAAAEGGQNMGLLFGLVFVIAGLAFKVSAAPFHMWTPDVYEGAPTPVAAFFATAPKLAAMVLLARVLMEPFGPMTEQWQQVTMVMAVLSMAFGSFGALMQSNIKRLMGYSSIGNMGYVLVGLSAGTALGLWSVLFYMTLYVIGVAGAFAVILSMRRSEGMVERIEDLAGLSQTRPALAWSMTALMFSIGGMPFMIGFFGKLFVFYAAVQAGLIWLVILAVLFSTVSIAYYLRVIKVIWFDEPN 852
            RASEAGLKYFV GALSSGLL YGASLVYGF+G T F+AIA+AA      +GL+FGLVF+++GLAFK+SAAPFHMWTPDVYEGAPTPVAAFFATAPKLAAM L+ARVL EPFG M +QWQQV +V+A+LSM  G+FGALMQSNIKRLM YSSI N+GY LVGL+AGT   LW+VL YMTLYV+GVAG F VILSMRRSEGMVER+EDL+GL+QTRP L  ++T L+ S+GGMPF++GFFGKLFVFYAAV+AGLIWL ++  LFS VSI+YYL ++K +WFDEP 
Sbjct:  159 RASEAGLKYFVLGALSSGLLLYGASLVYGFAGGTTFEAIALAAQSDANALGLVFGLVFLLSGLAFKISAAPFHMWTPDVYEGAPTPVAAFFATAPKLAAMALVARVLTEPFGAMIDQWQQVVIVLAILSMGIGAFGALMQSNIKRLMAYSSIANVGYALVGLAAGTQTALWAVLLYMTLYVVGVAGTFGVILSMRRSEGMVERLEDLSGLAQTRPGLGLAITGLLLSVGGMPFLVGFFGKLFVFYAAVEAGLIWLAVVGALFSVVSISYYLAILKRVWFDEPR 441          
BLAST of mRNA_C-australica_Contig_9833.1.1 vs. uniprot
Match: UPI00035F96E3 (NADH-quinone oxidoreductase subunit NuoN n=1 Tax=Woodsholea maritima TaxID=240237 RepID=UPI00035F96E3)

HSP 1 Score: 409 bits (1050), Expect = 9.690e-139
Identity = 208/284 (73.24%), Postives = 247/284 (86.97%), Query Frame = 1
Query:    1 LRASEAGLKYFVRGALSSGLLRYGASLVYGFSGSTAFDAIAVAAAEGGQNMGLLFGLVFVIAGLAFKVSAAPFHMWTPDVYEGAPTPVAAFFATAPKLAAMVLLARVLMEPFGPMTEQWQQVTMVMAVLSMAFGSFGALMQSNIKRLMGYSSIGNMGYVLVGLSAGTALGLWSVLFYMTLYVIGVAGAFAVILSMRRSEGMVERIEDLAGLSQTRPALAWSMTALMFSIGGMPFMIGFFGKLFVFYAAVQAGLIWLVILAVLFSTVSIAYYLRVIKVIWFDEPN 852
            LRASEAGLKYFV GALSSGLL YGASL+YGFSG+T F  IA A A    ++GL+FG++F+++GLAFK+SAAPFHMWTPDVYEG+PTPV AFFATAPKLAAM L+ARVLM+PF  M   WQQV MV++VLSMA G+FGAL Q+NIKRL+ YSSIGNMG+ LVGL+AGT++GLW++L Y+TLYVI VAG+F ++LSMRRS+GMVERIEDLAGL+QTRP L WSMTALM SIGG+PF +GFFGKLFVFYAAV +GLI   ++A L S VS+AYYLRV+KVIWFDEP+
Sbjct:  157 LRASEAGLKYFVLGALSSGLLLYGASLIYGFSGTTNFAGIAEAVAAE-PSLGLMFGMIFLLSGLAFKISAAPFHMWTPDVYEGSPTPVTAFFATAPKLAAMALIARVLMQPFAEMVHDWQQVVMVLSVLSMAVGAFGALTQTNIKRLLAYSSIGNMGFALVGLAAGTSIGLWALLLYLTLYVISVAGSFGIVLSMRRSDGMVERIEDLAGLAQTRPGLGWSMTALMLSIGGLPFFVGFFGKLFVFYAAVSSGLIIFTVIAGLLSVVSMAYYLRVVKVIWFDEPD 439          
BLAST of mRNA_C-australica_Contig_9833.1.1 vs. uniprot
Match: A0A7G8ZIR5_9PROT (NADH-quinone oxidoreductase subunit N n=1 Tax=Hyphobacterium sp. CCMP332 TaxID=2749086 RepID=A0A7G8ZIR5_9PROT)

HSP 1 Score: 403 bits (1036), Expect = 1.280e-136
Identity = 204/283 (72.08%), Postives = 245/283 (86.57%), Query Frame = 1
Query:    1 LRASEAGLKYFVRGALSSGLLRYGASLVYGFSGSTAFDAIAVAAAEGGQNMGLLFGLVFVIAGLAFKVSAAPFHMWTPDVYEGAPTPVAAFFATAPKLAAMVLLARVLMEPFGPMTEQWQQVTMVMAVLSMAFGSFGALMQSNIKRLMGYSSIGNMGYVLVGLSAGTALGLWSVLFYMTLYVIGVAGAFAVILSMRRSEGMVERIEDLAGLSQTRPALAWSMTALMFSIGGMPFMIGFFGKLFVFYAAVQAGLIWLVILAVLFSTVSIAYYLRVIKVIWFDEP 849
            LRASEAGLKYFV GALSSGLL YGASLVYGF+G+T F+ IA++AA G  ++GLLFGLVF+I GLAFKVSAAPFHMWTPDVYEG+PTPV AFFATAPK AA+VLLAR+L+EPFG MT+QWQQV   +AVLSMA G+FGAL Q+NIKRLM YSSIGNMGY LV ++AGT +GLW++L +M LYVIG+  AF VILSMR SEGMVE++EDLAGL+Q+ P LAW+MT  MFSIGG+PF++GFFGKLF+ YAA+QAGL++L I  VLFS V+  YYLR+++V+WF +P
Sbjct:  157 LRASEAGLKYFVLGALSSGLLLYGASLVYGFTGATGFNEIAISAASGEVSIGLLFGLVFIICGLAFKVSAAPFHMWTPDVYEGSPTPVTAFFATAPKFAAIVLLARILLEPFGAMTDQWQQVITAIAVLSMAVGAFGALTQNNIKRLMAYSSIGNMGYALVAIAAGTEIGLWALLAFMILYVIGLIAAFGVILSMRTSEGMVEQVEDLAGLAQSHPGLAWTMTGAMFSIGGLPFLVGFFGKLFIVYAALQAGLVFLPIALVLFSVVAAYYYLRIVRVMWFSDP 439          
The following BLAST results are available for this feature:
BLAST of mRNA_C-australica_Contig_9833.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A3UCU5_9PROT1.520e-18196.13NADH-quinone oxidoreductase subunit N n=3 Tax=Ocea... [more]
A0A5M6ZPL0_9PROT2.750e-15780.63NADH-quinone oxidoreductase subunit N n=1 Tax=Alka... [more]
A0A2U2BTA9_9PROT4.470e-15780.99NADH-quinone oxidoreductase subunit N n=1 Tax=Mari... [more]
UPI001EDE86EB8.000e-15278.09NADH-quinone oxidoreductase subunit NuoN n=1 Tax=S... [more]
A0A3T0EBH3_9PROT1.100e-14577.46NADH-quinone oxidoreductase subunit N n=4 Tax=Mari... [more]
A0A550KKV6_9PROT4.800e-14477.11NADH-quinone oxidoreductase subunit N n=1 Tax=Glyc... [more]
A0A4S2HEE0_9PROT1.190e-14274.56NADH-quinone oxidoreductase subunit N n=1 Tax=Mari... [more]
A0A4S2GWC9_9PROT9.630e-14274.20NADH-quinone oxidoreductase subunit N n=1 Tax=Mari... [more]
UPI00035F96E39.690e-13973.24NADH-quinone oxidoreductase subunit NuoN n=1 Tax=W... [more]
A0A7G8ZIR5_9PROT1.280e-13672.08NADH-quinone oxidoreductase subunit N n=1 Tax=Hyph... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-australica_Contig_9833contigC-australica_Contig_9833:3..854 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Chrysoparadoxa australica CS_1217 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog1122613.ATUP01000001_gene141
Preferred namenuoN
PFAMsProton_antipo_M
Model size852
Max annot lvl28211|Alphaproteobacteria
KEGG rclassRC00061
KEGG koko:K00343
KEGG TC3.D.1
KEGG ReactionR11945
KEGG Pathwayko00190,ko01100,map00190,map01100
KEGG ModuleM00144
Hectar predicted targeting categoryother localisation
Exons1
Evalue3.94e-186
EggNOG OGsCOG1007@1|root,COG1007@2|Bacteria,1MV56@1224|Proteobacteria,2TQMX@28211|Alphaproteobacteria,43WFH@69657|Hyphomonadaceae
EC1.6.5.3
DescriptionNDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
Cds size852
COG categoryC
BRITEko00000,ko00001,ko00002,ko01000
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1682588850.933209-CDS-C-australica_Contig_9833:2..8541682588850.933209-CDS-C-australica_Contig_9833:2..854Chrysoparadoxa australica CS_1217CDSC-australica_Contig_9833 3..854 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_C-australica_Contig_9833.1.1prot_C-australica_Contig_9833.1.1Chrysoparadoxa australica CS_1217polypeptideC-australica_Contig_9833 3..854 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_C-australica_Contig_9833.1.1

>prot_C-australica_Contig_9833.1.1 ID=prot_C-australica_Contig_9833.1.1|Name=mRNA_C-australica_Contig_9833.1.1|organism=Chrysoparadoxa australica CS_1217|type=polypeptide|length=284bp
LRASEAGLKYFVRGALSSGLLRYGASLVYGFSGSTAFDAIAVAAAEGGQN
MGLLFGLVFVIAGLAFKVSAAPFHMWTPDVYEGAPTPVAAFFATAPKLAA
MVLLARVLMEPFGPMTEQWQQVTMVMAVLSMAFGSFGALMQSNIKRLMGY
SSIGNMGYVLVGLSAGTALGLWSVLFYMTLYVIGVAGAFAVILSMRRSEG
MVERIEDLAGLSQTRPALAWSMTALMFSIGGMPFMIGFFGKLFVFYAAVQ
AGLIWLVILAVLFSTVSIAYYLRVIKVIWFDEPN
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mRNA from alignment at C-australica_Contig_9833:3..854-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_C-australica_Contig_9833.1.1 ID=mRNA_C-australica_Contig_9833.1.1|Name=mRNA_C-australica_Contig_9833.1.1|organism=Chrysoparadoxa australica CS_1217|type=mRNA|length=852bp|location=Sequence derived from alignment at C-australica_Contig_9833:3..854- (Chrysoparadoxa australica CS_1217)
CTGCGCGCATCCGAAGCCGGCCTGAAATACTTTGTGCGGGGCGCGCTCAG CTCGGGTCTGTTGCGGTATGGCGCATCGCTCGTCTACGGCTTCTCAGGCT CCACCGCATTTGACGCCATCGCTGTCGCGGCGGCGGAAGGCGGCCAGAAT ATGGGTCTGCTGTTCGGCCTGGTCTTCGTGATCGCCGGTCTCGCCTTCAA GGTGTCCGCCGCGCCGTTCCACATGTGGACGCCGGATGTGTATGAGGGCG CGCCGACCCCGGTCGCGGCCTTCTTCGCCACCGCGCCGAAACTGGCGGCC ATGGTGCTGCTGGCGCGCGTTCTGATGGAGCCGTTCGGCCCGATGACCGA GCAATGGCAGCAAGTCACCATGGTGATGGCGGTGCTGTCGATGGCGTTCG GTTCGTTCGGGGCGCTGATGCAGTCCAATATCAAACGCCTGATGGGCTAC TCCTCCATCGGCAATATGGGCTATGTGCTGGTTGGTCTGTCCGCCGGCAC GGCGCTCGGCCTGTGGTCGGTGCTGTTCTACATGACGCTGTATGTGATCG GCGTCGCCGGTGCGTTCGCCGTCATCCTCTCCATGCGTCGCTCCGAGGGC ATGGTGGAGCGGATCGAGGATCTGGCCGGTCTGTCCCAGACCCGTCCGGC GCTTGCCTGGTCGATGACCGCTCTGATGTTCTCCATTGGCGGCATGCCGT TCATGATCGGCTTCTTCGGCAAGCTCTTCGTGTTCTACGCGGCGGTGCAG GCGGGGCTGATCTGGCTGGTCATTCTGGCGGTGCTCTTCTCCACGGTGTC GATCGCGTACTATCTGCGCGTCATCAAGGTGATCTGGTTTGACGAACCCA AT
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Coding sequence (CDS) from alignment at C-australica_Contig_9833:3..854-

>mRNA_C-australica_Contig_9833.1.1 ID=mRNA_C-australica_Contig_9833.1.1|Name=mRNA_C-australica_Contig_9833.1.1|organism=Chrysoparadoxa australica CS_1217|type=CDS|length=852bp|location=Sequence derived from alignment at C-australica_Contig_9833:3..854- (Chrysoparadoxa australica CS_1217)
CTGCGCGCATCCGAAGCCGGCCTGAAATACTTTGTGCGGGGCGCGCTCAG
CTCGGGTCTGTTGCGGTATGGCGCATCGCTCGTCTACGGCTTCTCAGGCT
CCACCGCATTTGACGCCATCGCTGTCGCGGCGGCGGAAGGCGGCCAGAAT
ATGGGTCTGCTGTTCGGCCTGGTCTTCGTGATCGCCGGTCTCGCCTTCAA
GGTGTCCGCCGCGCCGTTCCACATGTGGACGCCGGATGTGTATGAGGGCG
CGCCGACCCCGGTCGCGGCCTTCTTCGCCACCGCGCCGAAACTGGCGGCC
ATGGTGCTGCTGGCGCGCGTTCTGATGGAGCCGTTCGGCCCGATGACCGA
GCAATGGCAGCAAGTCACCATGGTGATGGCGGTGCTGTCGATGGCGTTCG
GTTCGTTCGGGGCGCTGATGCAGTCCAATATCAAACGCCTGATGGGCTAC
TCCTCCATCGGCAATATGGGCTATGTGCTGGTTGGTCTGTCCGCCGGCAC
GGCGCTCGGCCTGTGGTCGGTGCTGTTCTACATGACGCTGTATGTGATCG
GCGTCGCCGGTGCGTTCGCCGTCATCCTCTCCATGCGTCGCTCCGAGGGC
ATGGTGGAGCGGATCGAGGATCTGGCCGGTCTGTCCCAGACCCGTCCGGC
GCTTGCCTGGTCGATGACCGCTCTGATGTTCTCCATTGGCGGCATGCCGT
TCATGATCGGCTTCTTCGGCAAGCTCTTCGTGTTCTACGCGGCGGTGCAG
GCGGGGCTGATCTGGCTGGTCATTCTGGCGGTGCTCTTCTCCACGGTGTC
GATCGCGTACTATCTGCGCGTCATCAAGGTGATCTGGTTTGACGAACCCA
AT
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