Homology
BLAST of mRNA_C-australica_Contig_983.2.1 vs. uniprot
Match:
A0A835YMG5_9STRA (Vitamin B6 photo-protection and homoeostasis-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YMG5_9STRA)
HSP 1 Score: 78.2 bits (191), Expect = 1.360e-15
Identity = 36/51 (70.59%), Postives = 43/51 (84.31%), Query Frame = 2
Query: 5 VLPHGYPDSVPPSYQHYMRWQFLSMVASSASGVMSTQALLHAVGLGSGAIP 157
+LP GYPDSV P Y Y+RWQ SMV +SA+GV+STQALLHAVGLG+GA+P
Sbjct: 85 ILPAGYPDSVRPGYARYVRWQLSSMVCTSAAGVLSTQALLHAVGLGAGAVP 135
BLAST of mRNA_C-australica_Contig_983.2.1 vs. uniprot
Match:
A0A835YUA2_9STRA (Vitamin B6 photo-protection and homoeostasis-domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YUA2_9STRA)
HSP 1 Score: 72.8 bits (177), Expect = 7.710e-14
Identity = 36/51 (70.59%), Postives = 41/51 (80.39%), Query Frame = 2
Query: 5 VLPHGYPDSVPPSYQHYMRWQFLSMVASSASGVMSTQALLHAVGLGSGAIP 157
+LP GYP++V Y Y WQF SMV SSA+GV+STQALLHAVGLGSGAIP
Sbjct: 4 ILPAGYPEAVNAGYGSYTGWQFTSMVFSSAAGVLSTQALLHAVGLGSGAIP 54
BLAST of mRNA_C-australica_Contig_983.2.1 vs. uniprot
Match:
D8LJS3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJS3_ECTSI)
HSP 1 Score: 68.6 bits (166), Expect = 3.340e-12
Identity = 33/51 (64.71%), Postives = 40/51 (78.43%), Query Frame = 2
Query: 5 VLPHGYPDSVPPSYQHYMRWQFLSMVASSASGVMSTQALLHAVGLGSGAIP 157
VLP G+P SV P Y Y WQF M AS+A+GVMSTQALL+A+GLG+GA+P
Sbjct: 5 VLPSGFPASVHPPYMAYAGWQFTGMAASAAAGVMSTQALLYAMGLGAGALP 55
BLAST of mRNA_C-australica_Contig_983.2.1 vs. uniprot
Match:
A0A6H5L0I8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L0I8_9PHAE)
HSP 1 Score: 66.6 bits (161), Expect = 1.600e-11
Identity = 32/51 (62.75%), Postives = 39/51 (76.47%), Query Frame = 2
Query: 5 VLPHGYPDSVPPSYQHYMRWQFLSMVASSASGVMSTQALLHAVGLGSGAIP 157
VLP G+P SV P Y Y WQF M AS+A+GVMSTQALL+A+G+G GA+P
Sbjct: 176 VLPSGFPGSVHPPYMAYAGWQFTGMAASAAAGVMSTQALLYAMGVGVGALP 226
BLAST of mRNA_C-australica_Contig_983.2.1 vs. uniprot
Match:
M8AEK8_TRIUA (Uncharacterized protein n=2 Tax=Triticum TaxID=4564 RepID=M8AEK8_TRIUA)
HSP 1 Score: 63.5 bits (153), Expect = 4.460e-11
Identity = 32/51 (62.75%), Postives = 37/51 (72.55%), Query Frame = 2
Query: 5 VLPHGYPDSVPPSYQHYMRWQFLSMVASSASGVMSTQALLHAVGLGSGAIP 157
+LP GYP SV Y HY W+ + VAS SGV+STQALL+AVGLG GAIP
Sbjct: 64 LLPDGYPHSVSSDYLHYSLWRGVQGVASQISGVLSTQALLYAVGLGKGAIP 114
BLAST of mRNA_C-australica_Contig_983.2.1 vs. uniprot
Match:
A0A5A8CKM9_CAFRO (Uncharacterized protein n=5 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8CKM9_CAFRO)
HSP 1 Score: 65.1 bits (157), Expect = 5.580e-11
Identity = 31/51 (60.78%), Postives = 37/51 (72.55%), Query Frame = 2
Query: 5 VLPHGYPDSVPPSYQHYMRWQFLSMVASSASGVMSTQALLHAVGLGSGAIP 157
VLP GYP SV PSY Y W + AS+A+GV+S QALLHAVG G+GA+P
Sbjct: 87 VLPQGYPVSVAPSYAQYAAWSAVGSTASAAAGVLSMQALLHAVGAGAGAVP 137
BLAST of mRNA_C-australica_Contig_983.2.1 vs. uniprot
Match:
A0A0D2WSA8_CAPO3 (Uncharacterized protein n=2 Tax=Capsaspora owczarzaki (strain ATCC 30864) TaxID=595528 RepID=A0A0D2WSA8_CAPO3)
HSP 1 Score: 65.1 bits (157), Expect = 5.600e-11
Identity = 31/50 (62.00%), Postives = 38/50 (76.00%), Query Frame = 2
Query: 8 LPHGYPDSVPPSYQHYMRWQFLSMVASSASGVMSTQALLHAVGLGSGAIP 157
LP GYP SV P+Y Y RWQ + V + +GV+STQALL+AVGLG+GAIP
Sbjct: 328 LPKGYPHSVTPNYMGYSRWQAVQSVTGTMTGVLSTQALLYAVGLGAGAIP 377
BLAST of mRNA_C-australica_Contig_983.2.1 vs. uniprot
Match:
UPI001F5D0A40 (protein root UVB sensitive 1, chloroplastic-like n=2 Tax=Lolium rigidum TaxID=89674 RepID=UPI001F5D0A40)
HSP 1 Score: 64.3 bits (155), Expect = 1.040e-10
Identity = 32/51 (62.75%), Postives = 37/51 (72.55%), Query Frame = 2
Query: 5 VLPHGYPDSVPPSYQHYMRWQFLSMVASSASGVMSTQALLHAVGLGSGAIP 157
+LP GYP SV Y HY W+ + VAS SGV+STQALL+AVGLG GAIP
Sbjct: 198 LLPDGYPHSVSSDYMHYSLWRGVQGVASQISGVLSTQALLYAVGLGKGAIP 248
BLAST of mRNA_C-australica_Contig_983.2.1 vs. uniprot
Match:
A0A833VEA6_9POAL (Protein root UVB sensitive 1 n=1 Tax=Carex littledalei TaxID=544730 RepID=A0A833VEA6_9POAL)
HSP 1 Score: 63.9 bits (154), Expect = 1.430e-10
Identity = 31/51 (60.78%), Postives = 37/51 (72.55%), Query Frame = 2
Query: 5 VLPHGYPDSVPPSYQHYMRWQFLSMVASSASGVMSTQALLHAVGLGSGAIP 157
+LPHGYP SV Y Y W+ + +AS SGV+STQALL+AVGLG GAIP
Sbjct: 196 MLPHGYPYSVSADYMEYSLWRGVQGIASQVSGVLSTQALLYAVGLGKGAIP 246
BLAST of mRNA_C-australica_Contig_983.2.1 vs. uniprot
Match:
I1IWN3_BRADI (Uncharacterized protein n=1 Tax=Brachypodium distachyon TaxID=15368 RepID=I1IWN3_BRADI)
HSP 1 Score: 63.9 bits (154), Expect = 1.430e-10
Identity = 32/51 (62.75%), Postives = 37/51 (72.55%), Query Frame = 2
Query: 5 VLPHGYPDSVPPSYQHYMRWQFLSMVASSASGVMSTQALLHAVGLGSGAIP 157
+LP GYP+SV Y HY W+ L VAS SGV+STQALL+AVGLG G IP
Sbjct: 206 LLPDGYPNSVSSDYLHYSLWRGLQGVASQISGVLSTQALLYAVGLGKGVIP 256
The following BLAST results are available for this feature:
BLAST of mRNA_C-australica_Contig_983.2.1 vs. uniprot
Analysis Date: 2022-09-19 (
Diamond blastx: OGS1.0 vs UniRef90 )
Total hits: 25
0 1 Expect = 1.36e-15 / Id = 70.59 Expect = 7.71e-14 / Id = 70.59 Expect = 3.34e-12 / Id = 64.71 Expect = 1.60e-11 / Id = 62.75 Expect = 4.46e-11 / Id = 62.75 Expect = 5.58e-11 / Id = 60.78 Expect = 5.60e-11 / Id = 62.00 Expect = 1.04e-10 / Id = 62.75 Expect = 1.43e-10 / Id = 60.78 Expect = 1.43e-10 / Id = 62.75 Sequence A0A835YMG5_9STRA A0A835YUA2_9STRA D8LJS3_ECTSI A0A6H5L0I8_9PHAE M8AEK8_TRIUA A0A5A8CKM9_CAFRO A0A0D2WSA8_CAPO3 UPI001F5D0A40 A0A833VEA6_9POAL I1IWN3_BRADI
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Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-australica_Contig_983.2.1
>prot_C-australica_Contig_983.2.1 ID=prot_C-australica_Contig_983.2.1|Name=mRNA_C-australica_Contig_983.2.1|organism=Chrysoparadoxa australica CS_1217|type=polypeptide|length=53bp
QGATPWVPGQCPPILPTLHAVAVPIYGCFICLRCHVHTGLAACSWSWLGS HSH back to top mRNA from alignment at C-australica_Contig_983:946..1312+
Legend: CDS polypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_C-australica_Contig_983.2.1 ID=mRNA_C-australica_Contig_983.2.1|Name=mRNA_C-australica_Contig_983.2.1|organism=Chrysoparadoxa australica CS_1217|type=mRNA|length=367bp|location=Sequence derived from alignment at C-australica_Contig_983:946..1312+ (Chrysoparadoxa australica CS_1217)CAAGGTGCTACCCCATGGGTACCCGGACAGTGTCCCCCCATCCTACCAAC
ATTACATGCGGTGGCAGTTCCTATCTATGGTTGCTTCATCTGCCTCAG GT
TTCGAAAACTTCTCAGAAACTTTTCAGCTGCCACGCCGCCCCACTAGCTG
TCTCAACCCTGATGTCTTACATCAAGACCTCCAGTCATGTATACCTGCTG
CTTTGTTGCAAACCCATTCACTCAACTCACTCTCGTCTCCTGTGCACGTA
AACCCCCTCACGTGCCACCACTCAACCAGTCACTCATTCTTGCACTCTGC
TGCAGGTGTCATGTCCACACAGGCCTTGCTGCATGCAGTTGGTCTTGGCT
CGGGAGCCATTCCCAT A back to top Coding sequence (CDS) from alignment at C-australica_Contig_983:946..1312+
>mRNA_C-australica_Contig_983.2.1 ID=mRNA_C-australica_Contig_983.2.1|Name=mRNA_C-australica_Contig_983.2.1|organism=Chrysoparadoxa australica CS_1217|type=CDS|length=159bp|location=Sequence derived from alignment at C-australica_Contig_983:946..1312+ (Chrysoparadoxa australica CS_1217) CAAGGTGCTACCCCATGGGTACCCGGACAGTGTCCCCCCATCCTACCAAC ATTACATGCGGTGGCAGTTCCTATCTATGGTTGCTTCATCTGCCTCAGGT GTCATGTCCACACAGGCCTTGCTGCATGCAGTTGGTCTTGGCTCGGGAGC CATTCCCAT back to top