mRNA_C-australica_Contig_9824.1.1 (mRNA) Chrysoparadoxa australica CS_1217

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_C-australica_Contig_9824.1.1
Unique NamemRNA_C-australica_Contig_9824.1.1
TypemRNA
OrganismChrysoparadoxa australica CS_1217 (Chrysoparadoxa australica CS_1217)
Homology
BLAST of mRNA_C-australica_Contig_9824.1.1 vs. uniprot
Match: UPI0003B6AA3D (hypothetical protein n=1 Tax=Oceanicaulis alexandrii TaxID=153233 RepID=UPI0003B6AA3D)

HSP 1 Score: 561 bits (1446), Expect = 1.090e-200
Identity = 275/284 (96.83%), Postives = 278/284 (97.89%), Query Frame = 1
Query:    1 LRDGSIPWVETGVWDPWNHGESAMALAIAGRETATHAALDALAERQHADGSWLGELGAGVPMHQDGERIAPPADPVTAHDTNFTGYAAVTVLRSALALDEPRLIARHADMISRALDWVVGHQTPYGDVVWRKPDEGQALEAVDSLKAGNASLFKSLECGLRIADALGRKRSDWAQARRQIAHAFATKPHRFDRLGEDRSRYAMDWYYPVLSGVVTGLEAKAHLHAGWDRFVVEDLGCRCVTEEPWITAAETAELALACLSIGDTVRAQTLLGALAPLGRYGDGY 852
            LRDGSIPWVETGVWDPWNHGESAMALAIAGRETA HAALDALAERQHADGSWLGELGAGVPM +DGERIAPP+DPVTAHDTNFTGYAAVTVLRSALALDEPRLIARHADMISRALDWVV HQTP+GDVVWRKPDEGQALEAVDSLKAGNASLFKSLECGLRIADALGRKRSDWAQARRQIAHAFATKPHRFDRLGEDRSRYAMDWYYPVLSGVVTGLEAKAHLHAGWDRFVVEDLGCRCVTEEPWITAAETAELALACLSIGDTVRAQ LLGALAPL R GDGY
Sbjct:   24 LRDGSIPWVETGVWDPWNHGESAMALAIAGRETAAHAALDALAERQHADGSWLGELGAGVPMDKDGERIAPPSDPVTAHDTNFTGYAAVTVLRSALALDEPRLIARHADMISRALDWVVDHQTPHGDVVWRKPDEGQALEAVDSLKAGNASLFKSLECGLRIADALGRKRSDWAQARRQIAHAFATKPHRFDRLGEDRSRYAMDWYYPVLSGVVTGLEAKAHLHAGWDRFVVEDLGCRCVTEEPWITAAETAELALACLSIGDTVRAQNLLGALAPLARDGDGY 307          
BLAST of mRNA_C-australica_Contig_9824.1.1 vs. uniprot
Match: A3UE56_9PROT (Uncharacterized protein n=2 Tax=unclassified Oceanicaulis TaxID=2632123 RepID=A3UE56_9PROT)

HSP 1 Score: 501 bits (1291), Expect = 4.390e-177
Identity = 242/284 (85.21%), Postives = 260/284 (91.55%), Query Frame = 1
Query:    1 LRDGSIPWVETGVWDPWNHGESAMALAIAGRETATHAALDALAERQHADGSWLGELGAGVPMHQDGERIAPPADPVTAHDTNFTGYAAVTVLRSALALDEPRLIARHADMISRALDWVVGHQTPYGDVVWRKPDEGQALEAVDSLKAGNASLFKSLECGLRIADALGRKRSDWAQARRQIAHAFATKPHRFDRLGEDRSRYAMDWYYPVLSGVVTGLEAKAHLHAGWDRFVVEDLGCRCVTEEPWITAAETAELALACLSIGDTVRAQTLLGALAPLGRYGDGY 852
            LRDG+IPW+ETGVWDPWNHGESAMALA+AGRETA HAALDALAERQH DGSWLGELGAGVPM + G+RIAPP +PVTA DTNFTGYAAVTVLR ALALDEPRLIARHA MI+RALDWVV HQTP+GDVVWRKPD+GQ LE VDSLKAGNASL+KSLECGLRIADAL + R DWA+AR+ IA  F  +PHRFDRLGEDRSRYAMDWYYPVLSGV+TGL AKAHLHAGWD+FVVEDLGCRCV+EEPWITAAETAELALACLSIG+TVRAQ LLGALAPL R G GY
Sbjct:   24 LRDGAIPWIETGVWDPWNHGESAMALAVAGRETAVHAALDALAERQHEDGSWLGELGAGVPMDESGDRIAPPENPVTARDTNFTGYAAVTVLRCALALDEPRLIARHAGMITRALDWVVSHQTPHGDVVWRKPDDGQPLEDVDSLKAGNASLYKSLECGLRIADALDQSRPDWARARKTIAQTFTDRPHRFDRLGEDRSRYAMDWYYPVLSGVLTGLGAKAHLHAGWDKFVVEDLGCRCVSEEPWITAAETAELALACLSIGETVRAQRLLGALAPLARDGLGY 307          
BLAST of mRNA_C-australica_Contig_9824.1.1 vs. uniprot
Match: A0A4S2GYX3_9PROT (Uncharacterized protein n=1 Tax=Marinicauda algicola TaxID=2029849 RepID=A0A4S2GYX3_9PROT)

HSP 1 Score: 427 bits (1099), Expect = 7.370e-148
Identity = 208/276 (75.36%), Postives = 230/276 (83.33%), Query Frame = 1
Query:    4 RDGSIPWVETGVWDPWNHGESAMALAIAGRETATHAALDALAERQHADGSWLGELGAGVPMHQDGERIAPPADPVTAHDTNFTGYAAVTVLRSALALDEPRLIARHADMISRALDWVVGHQTPYGDVVWRKPDEGQALEAVDSLKAGNASLFKSLECGLRIADALGRKRSDWAQARRQIAHAFATKPHRFDRLGEDRSRYAMDWYYPVLSGVVTGLEAKAHLHAGWDRFVVEDLGCRCVTEEPWITAAETAELALACLSIGDTVRAQTLLGALAPL 831
            RDGSIPWVE GVWDPWNHGESAM LA+AGR  A HAALDAL +RQ ADGSW GELGAG+PM   GERIAPP  P TA DTNFTGYAAVTVLR ALALDEPRLIARHA M++RALDWV+ HQ+ +GDVVWR PD GQALE+VD+L+AGNASLFKS ECGLR+ADAL R R DWAQARR+I  A   +P RFDR   DRS YAMDWYYPVL+GV+TG E +AHL AGW RFVVEDLGCRCV+ EPW+TAAETAELALACLS+G T  A+ L+  LAPL
Sbjct:   24 RDGSIPWVEAGVWDPWNHGESAMGLAVAGRAEAVHAALDALEDRQLADGSWEGELGAGIPMDATGERIAPPEKPATARDTNFTGYAAVTVLRCALALDEPRLIARHAGMVTRALDWVMAHQSEHGDVVWRAPDPGQALESVDALRAGNASLFKSFECGLRLADALDRTRPDWAQARRRIGEALTARPERFDR-EIDRSCYAMDWYYPVLTGVITGREGRAHLEAGWTRFVVEDLGCRCVSGEPWVTAAETAELALACLSVGKTETARALISDLAPL 298          
BLAST of mRNA_C-australica_Contig_9824.1.1 vs. uniprot
Match: A0A5M6Z8Q7_9PROT (Uncharacterized protein n=2 Tax=Proteobacteria TaxID=1224 RepID=A0A5M6Z8Q7_9PROT)

HSP 1 Score: 425 bits (1092), Expect = 8.250e-147
Identity = 205/283 (72.44%), Postives = 231/283 (81.63%), Query Frame = 1
Query:    4 RDGSIPWVETGVWDPWNHGESAMALAIAGRETATHAALDALAERQHADGSWLGELGAGVPMHQDGERIAPPADPVTAHDTNFTGYAAVTVLRSALALDEPRLIARHADMISRALDWVVGHQTPYGDVVWRKPDEGQALEAVDSLKAGNASLFKSLECGLRIADALGRKRSDWAQARRQIAHAFATKPHRFDRLGEDRSRYAMDWYYPVLSGVVTGLEAKAHLHAGWDRFVVEDLGCRCVTEEPWITAAETAELALACLSIGDTVRAQTLLGALAPLGRYGDGY 852
            RDG+IPWVE GVWDPWNHGESAMALA+AGR  A   ALDALA+RQ +DG W GELGAGVPM + GERIAPPA PVTA DTNFTGYAAVTVLR ALALDEPRLIARHA M++RALDWV   QT +GD+VWR PD GQ LE +DSL+AGNASLFKS E GLRIADALG++++ WA+AR+ +AHAF   P RFDRLGEDR+RYAMDWYYPVL+G + G  A+  L AGW+RFVV DLGCRCV EEPWITAAETAELA+ACL +G   RA  L+  LAPL R   GY
Sbjct:   25 RDGTIPWVEAGVWDPWNHGESAMALAVAGRAEAAARALDALADRQESDGGWTGELGAGVPMDESGERIAPPAIPVTARDTNFTGYAAVTVLRCALALDEPRLIARHAPMVTRALDWVAARQTEFGDIVWRDPDPGQPLEEIDSLRAGNASLFKSFEAGLRIADALGQRKAGWARARQAVAHAFNHAPERFDRLGEDRTRYAMDWYYPVLTGAIRGEAARQRLEAGWNRFVVADLGCRCVAEEPWITAAETAELAMACLGVGWRERALALISDLAPLARGQGGY 307          
BLAST of mRNA_C-australica_Contig_9824.1.1 vs. uniprot
Match: A0A2U2BST3_9PROT (Uncharacterized protein n=1 Tax=Marinicauda salina TaxID=2135793 RepID=A0A2U2BST3_9PROT)

HSP 1 Score: 424 bits (1089), Expect = 2.280e-146
Identity = 208/282 (73.76%), Postives = 227/282 (80.50%), Query Frame = 1
Query:    7 DGSIPWVETGVWDPWNHGESAMALAIAGRETATHAALDALAERQHADGSWLGELGAGVPMHQDGERIAPPADPVTAHDTNFTGYAAVTVLRSALALDEPRLIARHADMISRALDWVVGHQTPYGDVVWRKPDEGQALEAVDSLKAGNASLFKSLECGLRIADALGRKRSDWAQARRQIAHAFATKPHRFDRLGEDRSRYAMDWYYPVLSGVVTGLEAKAHLHAGWDRFVVEDLGCRCVTEEPWITAAETAELALACLSIGDTVRAQTLLGALAPLGRYGDGY 852
            DGSIPW+E GVWDPWNHGE AMALA+A R  A HAALDALA+RQ  DG W GELGAGVPM   GERIAPP  PVTA DTNF GYAAVTVLR ALALDEPRLIARH  M+SRALD+    QT +GD+VWR PD  Q L A+DSL+AGNASLFKS ECGLRIADALGR R+DWA+ARR I  AFA +P RFDR   DRS YAMDWYYPVL+GVVTGLEA+AHL  GWDRFVV DLGCRCV EEPW+TAAETAELALACLS+G    A+TL+  LAPL    +GY
Sbjct:   25 DGSIPWIEAGVWDPWNHGECAMALAVADRAEAVHAALDALADRQEPDGGWTGELGAGVPMDAAGERIAPPEVPVTARDTNFAGYAAVTVLRCALALDEPRLIARHEAMVSRALDFAAARQTAHGDIVWRDPDPDQPLHAIDSLRAGNASLFKSFECGLRIADALGRTRTDWARARRAIGEAFAHRPDRFDRFDVDRSNYAMDWYYPVLTGVVTGLEARAHLSRGWDRFVVADLGCRCVGEEPWVTAAETAELALACLSVGRVDDARTLVSDLAPLSGDAEGY 306          
BLAST of mRNA_C-australica_Contig_9824.1.1 vs. uniprot
Match: A0A0P7VKE7_9PROT (Uncharacterized protein n=1 Tax=Oceanicaulis sp. HLUCCA04 TaxID=1666904 RepID=A0A0P7VKE7_9PROT)

HSP 1 Score: 402 bits (1033), Expect = 7.630e-138
Identity = 197/284 (69.37%), Postives = 224/284 (78.87%), Query Frame = 1
Query:    1 LRDGSIPWVETGVWDPWNHGESAMALAIAGRETATHAALDALAERQHADGSWLGELGAGVPMHQDGERIAPPADPVTAHDTNFTGYAAVTVLRSALALDEPRLIARHADMISRALDWVVGHQTPYGDVVWRKPDEGQALEAVDSLKAGNASLFKSLECGLRIADALGRKRSDWAQARRQIAHAFATKPHRFDRLGEDRSRYAMDWYYPVLSGVVTGLEAKAHLHAGWDRFVVEDLGCRCVTEEPWITAAETAELALACLSIGDTVRAQTLLGALAPLGRYGDGY 852
            LRDG+IPWVETGVWDPWNHGESAM LA+AGR  + H ALDALAERQ ADG W GELGAG+PM + GERIAPP  PVTA DTNF GYAAVTV+R ALALDEPRL+ARH  M++RALD+V+  QT +GDVVWR PD GQ LE VD+L+AGN+SLFKS ECGLR+A+ L + R+DWA++R  IA A    P RFDR G DRS YAMDWYYPVL+GV+TG EA+A L   WD FVV DLGCRCVT EPW+TAAETAELALACLS G    A+ L+  LAPL     GY
Sbjct:   24 LRDGAIPWVETGVWDPWNHGESAMGLAVAGRTESVHRALDALAERQEADGGWTGELGAGIPMDEAGERIAPPPVPVTARDTNFAGYAAVTVMRCALALDEPRLMARHFPMVARALDFVMNLQTRHGDVVWRAPDAGQTLEDVDALRAGNSSLFKSFECGLRLAEILEKPRTDWARSRAAIARALVHTPERFDRKGIDRSSYAMDWYYPVLTGVLTGAEARARLDESWDTFVVADLGCRCVTGEPWVTAAETAELALACLSTGRRDTARALVSELAPLAAPEGGY 307          
BLAST of mRNA_C-australica_Contig_9824.1.1 vs. uniprot
Match: A0A3T0E9E5_9PROT (Uncharacterized protein n=2 Tax=Glycocaulis TaxID=1433402 RepID=A0A3T0E9E5_9PROT)

HSP 1 Score: 400 bits (1028), Expect = 4.700e-137
Identity = 197/283 (69.61%), Postives = 223/283 (78.80%), Query Frame = 1
Query:    4 RDGSIPWVETGVWDPWNHGESAMALAIAGRETATHAALDALAERQHADGSWLGELGAGVPMHQDGERIAPPADPVTAHDTNFTGYAAVTVLRSALALDEPRLIARHADMISRALDWVVGHQTPYGDVVWRKPDEGQALEAVDSLKAGNASLFKSLECGLRIADALGRKRSDWAQARRQIAHAFATKPHRFDRLGEDRSRYAMDWYYPVLSGVVTGLEAKAHLHAGWDRFVVEDLGCRCVTEEPWITAAETAELALACLSIGDTVRAQTLLGALAPLGRYGDGY 852
            RDG+IPWVETGVWDPWNHGESAM LA+AGR    H ALDALA RQ ADG W GELGAG+PM + GERIAPP  PVTA DTNF GYAAVTV+R ALALDEPRLIAR+  M++RALD+V+  QT +GDVVWR PD GQ LE VD+L+AGN+SLFKS ECGLR+A+ L + R+DWA++R  IA A    P RFDR G DRS YAMDWYYPVL+GV+TG +AKA L  GWD FVV DLGCRCVT EPW+TAAETAELALACLS G    A+TL+  LAPL     GY
Sbjct:   25 RDGAIPWVETGVWDPWNHGESAMGLAVAGRVEGVHLALDALAARQEADGGWTGELGAGIPMDESGERIAPPPVPVTARDTNFAGYAAVTVMRCALALDEPRLIARYFPMVARALDFVMNLQTRHGDVVWRAPDIGQPLEDVDALRAGNSSLFKSFECGLRMAEILEKPRTDWARSRAAIARALTAMPERFDRKGIDRSSYAMDWYYPVLAGVLTGADAKARLDEGWDTFVVADLGCRCVTGEPWVTAAETAELALACLSAGRRDDARTLVNELAPLAAPDGGY 307          
BLAST of mRNA_C-australica_Contig_9824.1.1 vs. uniprot
Match: A0A550KIC1_9PROT (Uncharacterized protein n=1 Tax=Glycocaulis profundi TaxID=2518983 RepID=A0A550KIC1_9PROT)

HSP 1 Score: 400 bits (1027), Expect = 6.020e-137
Identity = 199/283 (70.32%), Postives = 221/283 (78.09%), Query Frame = 1
Query:    4 RDGSIPWVETGVWDPWNHGESAMALAIAGRETATHAALDALAERQHADGSWLGELGAGVPMHQDGERIAPPADPVTAHDTNFTGYAAVTVLRSALALDEPRLIARHADMISRALDWVVGHQTPYGDVVWRKPDEGQALEAVDSLKAGNASLFKSLECGLRIADALGRKRSDWAQARRQIAHAFATKPHRFDRLGEDRSRYAMDWYYPVLSGVVTGLEAKAHLHAGWDRFVVEDLGCRCVTEEPWITAAETAELALACLSIGDTVRAQTLLGALAPLGRYGDGY 852
            RDG+IPWVETGVWDPWNHGESAM LA+AGR  A H ALDAL +RQ ADG W GELGAG+PM + GERIAPPA PVTA DTNFTGYAAVTVL+ ALALDEPRLI RHADM+ RALDWV   QT +GD+VWR PD  Q LE VDSL+AGNASLFKS ECGLR+ D L R+R DWA+AR  IA A   +P RFDR   DRS YAMDWYYPVL+GV+TG  A+A L  GW RFVV DLG RCVT EPW+T AETAELALACLS G   +A+TL+  LAPL     G+
Sbjct:   25 RDGTIPWVETGVWDPWNHGESAMGLAVAGRGEAVHKALDALEDRQEADGGWTGELGAGIPMDESGERIAPPAIPVTARDTNFTGYAAVTVLKCALALDEPRLITRHADMVERALDWVAARQTAHGDIVWRDPDPDQPLEDVDSLRAGNASLFKSFECGLRLMDLLDRQRPDWARARDGIAKALIERPARFDRR-IDRSGYAMDWYYPVLTGVLTGEAARARLAEGWARFVVADLGARCVTGEPWVTVAETAELALACLSAGMREQARTLISELAPLSAKDGGF 306          
BLAST of mRNA_C-australica_Contig_9824.1.1 vs. uniprot
Match: UPI00035F6F59 (hypothetical protein n=1 Tax=Woodsholea maritima TaxID=240237 RepID=UPI00035F6F59)

HSP 1 Score: 363 bits (933), Expect = 1.210e-122
Identity = 169/276 (61.23%), Postives = 211/276 (76.45%), Query Frame = 1
Query:    4 RDGSIPWVETGVWDPWNHGESAMALAIAGRETATHAALDALAERQHADGSWLGELGAGVPMHQDGERIAPPADPVTAHDTNFTGYAAVTVLRSALALDEPRLIARHADMISRALDWVVGHQTPYGDVVWRKPDEGQALEAVDSLKAGNASLFKSLECGLRIADALGRKRSDWAQARRQIAHAFATKPHRFDRLGEDRSRYAMDWYYPVLSGVVTGLEAKAHLHAGWDRFVVEDLGCRCVTEEPWITAAETAELALACLSIGDTVRAQTLLGALAPL 831
            +DGSIPW+E G+WD WNHGES MALAIAGR+ A H  L+ALA RQ+ DGSW  ELGAGVPM    ER+APP +  T  DTNF GY AV VLR+ALALD PR++ ++  M+ RALD+V+  Q+P+GD+VW+  D G+    VDS++AGN SL+KSLECGLR+ DALG  R+DW +AR ++  A   KPHRFDR    R+RYAMDWYYP+LSGV+ G  AKAHL   WD +VV DLGCRCV+++PW+TAAETAELALACLS+G+   A+TL+  LAP+
Sbjct:   26 KDGSIPWIERGIWDAWNHGESVMALAIAGRKDAAHRGLEALAARQNEDGSWSCELGAGVPMDAANERLAPPQNLPTVRDTNFAGYVAVVVLRTALALDAPRVLTQYRSMVERALDFVLAQQSPHGDIVWKALDAGEDFSKVDSVRAGNCSLYKSLECGLRLMDALGEDRADWREARLRLGDALTRKPHRFDRFATQRARYAMDWYYPILSGVLLGKGAKAHLDQHWDTYVVADLGCRCVSDQPWVTAAETAELALACLSLGERETARTLIQDLAPM 301          
BLAST of mRNA_C-australica_Contig_9824.1.1 vs. uniprot
Match: A0A7G8ZHS0_9PROT (Uncharacterized protein n=1 Tax=Hyphobacterium sp. CCMP332 TaxID=2749086 RepID=A0A7G8ZHS0_9PROT)

HSP 1 Score: 333 bits (854), Expect = 9.150e-111
Identity = 167/282 (59.22%), Postives = 204/282 (72.34%), Query Frame = 1
Query:    7 DGSIPWVETGVWDPWNHGESAMALAIAGRETATHAALDALAERQHADGSWLGELGAGVPMHQDGERIAPPADPVTAHDTNFTGYAAVTVLRSALALDEPRLIARHADMISRALDWVVGHQTPYGDVVWRKPDEGQALEAVDSLKAGNASLFKSLECGLRIADALGRKRSDWAQARRQIAHAFATKPHRFDRLGEDRSRYAMDWYYPVLSGVVTGLEAKAHLHAGWDRFVVEDLGCRCVTEEPWITAAETAELALACLSIGDTVRAQTLLGALAPLGRYGDGY 852
            DGSIPW+E G+WDPWNHGESAMALA+AGR      AL+AL +RQ ADG W GELGAGVP+     R+    +P TA DTNFTGYAAVTVLRSALAL+EP  + R+A+ + RA+D+V+  QTP GD+VWRKPD G+ L  VDSL+AGNA L+KSLEC +R+  AL    +    AR ++A A   K  RFDR   DR RYAMDWYYPVLSGV +  E++  L AGW R+V+E LG RCV +EPW+TAAETAELALAC ++G T +A+ L+  LAPL     GY
Sbjct:   21 DGSIPWIEAGLWDPWNHGESAMALAVAGRTRTCERALNALFDRQEADGGWTGELGAGVPLDDTNRRLVVD-NPATARDTNFTGYAAVTVLRSALALNEPGWLDRYAEPVRRAMDFVLSCQTPEGDIVWRKPDVGEKLNDVDSLRAGNACLYKSLECAIRLETALSGDIAPLIAARARLADALHDKDWRFDRKSTDRRRYAMDWYYPVLSGVHSREESQRRLEAGWSRYVIEGLGSRCVADEPWVTAAETAELALACQAVGWTAKARKLITDLAPLAARSGGY 301          
The following BLAST results are available for this feature:
BLAST of mRNA_C-australica_Contig_9824.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
UPI0003B6AA3D1.090e-20096.83hypothetical protein n=1 Tax=Oceanicaulis alexandr... [more]
A3UE56_9PROT4.390e-17785.21Uncharacterized protein n=2 Tax=unclassified Ocean... [more]
A0A4S2GYX3_9PROT7.370e-14875.36Uncharacterized protein n=1 Tax=Marinicauda algico... [more]
A0A5M6Z8Q7_9PROT8.250e-14772.44Uncharacterized protein n=2 Tax=Proteobacteria Tax... [more]
A0A2U2BST3_9PROT2.280e-14673.76Uncharacterized protein n=1 Tax=Marinicauda salina... [more]
A0A0P7VKE7_9PROT7.630e-13869.37Uncharacterized protein n=1 Tax=Oceanicaulis sp. H... [more]
A0A3T0E9E5_9PROT4.700e-13769.61Uncharacterized protein n=2 Tax=Glycocaulis TaxID=... [more]
A0A550KIC1_9PROT6.020e-13770.32Uncharacterized protein n=1 Tax=Glycocaulis profun... [more]
UPI00035F6F591.210e-12261.23hypothetical protein n=1 Tax=Woodsholea maritima T... [more]
A0A7G8ZHS0_9PROT9.150e-11159.22Uncharacterized protein n=1 Tax=Hyphobacterium sp.... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-australica_Contig_9824contigC-australica_Contig_9824:3..854 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Chrysoparadoxa australica CS_1217 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog1122613.ATUP01000001_gene570
Model size852
Max annot lvl28211|Alphaproteobacteria
Hectar predicted targeting categoryother localisation
Exons1
Evalue1.79e-201
EggNOG OGsCOG3387@1|root,COG3387@2|Bacteria,1NB01@1224|Proteobacteria,2UNVB@28211|Alphaproteobacteria,43XJC@69657|Hyphomonadaceae
DescriptionPFAM Glycoside hydrolase 15-related
Cds size852
COG categoryG
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1682588850.058153-CDS-C-australica_Contig_9824:2..8541682588850.058153-CDS-C-australica_Contig_9824:2..854Chrysoparadoxa australica CS_1217CDSC-australica_Contig_9824 3..854 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_C-australica_Contig_9824.1.1prot_C-australica_Contig_9824.1.1Chrysoparadoxa australica CS_1217polypeptideC-australica_Contig_9824 3..854 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_C-australica_Contig_9824.1.1

>prot_C-australica_Contig_9824.1.1 ID=prot_C-australica_Contig_9824.1.1|Name=mRNA_C-australica_Contig_9824.1.1|organism=Chrysoparadoxa australica CS_1217|type=polypeptide|length=284bp
LRDGSIPWVETGVWDPWNHGESAMALAIAGRETATHAALDALAERQHADG
SWLGELGAGVPMHQDGERIAPPADPVTAHDTNFTGYAAVTVLRSALALDE
PRLIARHADMISRALDWVVGHQTPYGDVVWRKPDEGQALEAVDSLKAGNA
SLFKSLECGLRIADALGRKRSDWAQARRQIAHAFATKPHRFDRLGEDRSR
YAMDWYYPVLSGVVTGLEAKAHLHAGWDRFVVEDLGCRCVTEEPWITAAE
TAELALACLSIGDTVRAQTLLGALAPLGRYGDGY
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mRNA from alignment at C-australica_Contig_9824:3..854+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_C-australica_Contig_9824.1.1 ID=mRNA_C-australica_Contig_9824.1.1|Name=mRNA_C-australica_Contig_9824.1.1|organism=Chrysoparadoxa australica CS_1217|type=mRNA|length=852bp|location=Sequence derived from alignment at C-australica_Contig_9824:3..854+ (Chrysoparadoxa australica CS_1217)
TTGCGCGACGGGTCTATTCCGTGGGTGGAGACTGGCGTCTGGGATCCGTG GAACCATGGGGAGAGCGCCATGGCGCTGGCCATCGCCGGTCGGGAAACCG CCACCCATGCTGCGCTTGATGCGCTGGCCGAGCGTCAGCATGCCGACGGC TCCTGGCTGGGTGAGCTGGGCGCGGGCGTGCCCATGCATCAAGACGGTGA GCGGATCGCGCCGCCCGCTGATCCTGTCACCGCCCATGACACCAATTTCA CCGGCTACGCCGCCGTCACTGTCCTGCGCAGCGCGCTGGCGCTCGATGAA CCGCGCCTGATCGCCAGACACGCTGACATGATCAGCCGCGCGCTGGACTG GGTGGTCGGTCACCAGACGCCCTATGGCGATGTGGTGTGGCGCAAGCCCG ATGAGGGACAGGCGCTGGAGGCTGTGGATTCGCTGAAAGCGGGCAACGCC TCGCTGTTCAAAAGCCTCGAATGCGGCTTGCGCATCGCCGACGCCCTTGG GCGCAAACGCAGCGACTGGGCCCAGGCTAGACGCCAGATCGCGCACGCTT TCGCCACCAAACCGCACCGGTTTGACCGGCTGGGCGAAGACCGCTCTCGC TACGCCATGGACTGGTATTACCCGGTGCTGAGCGGCGTGGTGACGGGGCT TGAAGCCAAGGCGCACCTGCATGCCGGTTGGGACCGCTTCGTGGTCGAGG ATCTGGGCTGCCGCTGCGTCACCGAAGAGCCCTGGATCACCGCCGCGGAA ACCGCCGAGCTGGCGCTGGCCTGCCTGAGCATTGGCGACACCGTCCGCGC GCAAACCCTGTTGGGCGCGCTGGCCCCGCTGGGCCGCTACGGCGATGGCT AC
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Coding sequence (CDS) from alignment at C-australica_Contig_9824:3..854+

>mRNA_C-australica_Contig_9824.1.1 ID=mRNA_C-australica_Contig_9824.1.1|Name=mRNA_C-australica_Contig_9824.1.1|organism=Chrysoparadoxa australica CS_1217|type=CDS|length=852bp|location=Sequence derived from alignment at C-australica_Contig_9824:3..854+ (Chrysoparadoxa australica CS_1217)
TTGCGCGACGGGTCTATTCCGTGGGTGGAGACTGGCGTCTGGGATCCGTG
GAACCATGGGGAGAGCGCCATGGCGCTGGCCATCGCCGGTCGGGAAACCG
CCACCCATGCTGCGCTTGATGCGCTGGCCGAGCGTCAGCATGCCGACGGC
TCCTGGCTGGGTGAGCTGGGCGCGGGCGTGCCCATGCATCAAGACGGTGA
GCGGATCGCGCCGCCCGCTGATCCTGTCACCGCCCATGACACCAATTTCA
CCGGCTACGCCGCCGTCACTGTCCTGCGCAGCGCGCTGGCGCTCGATGAA
CCGCGCCTGATCGCCAGACACGCTGACATGATCAGCCGCGCGCTGGACTG
GGTGGTCGGTCACCAGACGCCCTATGGCGATGTGGTGTGGCGCAAGCCCG
ATGAGGGACAGGCGCTGGAGGCTGTGGATTCGCTGAAAGCGGGCAACGCC
TCGCTGTTCAAAAGCCTCGAATGCGGCTTGCGCATCGCCGACGCCCTTGG
GCGCAAACGCAGCGACTGGGCCCAGGCTAGACGCCAGATCGCGCACGCTT
TCGCCACCAAACCGCACCGGTTTGACCGGCTGGGCGAAGACCGCTCTCGC
TACGCCATGGACTGGTATTACCCGGTGCTGAGCGGCGTGGTGACGGGGCT
TGAAGCCAAGGCGCACCTGCATGCCGGTTGGGACCGCTTCGTGGTCGAGG
ATCTGGGCTGCCGCTGCGTCACCGAAGAGCCCTGGATCACCGCCGCGGAA
ACCGCCGAGCTGGCGCTGGCCTGCCTGAGCATTGGCGACACCGTCCGCGC
GCAAACCCTGTTGGGCGCGCTGGCCCCGCTGGGCCGCTACGGCGATGGCT
AC
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