mRNA_C-australica_Contig_982.7.2 (mRNA) Chrysoparadoxa australica CS_1217

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_C-australica_Contig_982.7.2
Unique NamemRNA_C-australica_Contig_982.7.2
TypemRNA
OrganismChrysoparadoxa australica CS_1217 (Chrysoparadoxa australica CS_1217)
Homology
BLAST of mRNA_C-australica_Contig_982.7.2 vs. uniprot
Match: A0A836CGB6_9STRA (Mitochondrial carrier domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CGB6_9STRA)

HSP 1 Score: 353 bits (905), Expect = 3.530e-117
Identity = 175/283 (61.84%), Postives = 215/283 (75.97%), Query Frame = 2
Query:  152 DASQLVSLMSGGISGSISLTLTSPIEVVKTQLQGSSNAGSSPINVAKTIFKQDGLQGFWRGLTPSLIGIFPARASYFWAYSTTKQSLLERFGDSPITHTLAALAAGVTSNTITNPIWMVKTRVQLLADTSRGQVAYAGYRDAVRSIWAEEGFAGFYKGLSASYWGCAEGCIQFVAYEKLKSKLIERYNALREAKGLPAADSLPPVQYLGAAGLSKLMGTIATYPHEVARTRLREQARNGLFKYNGGMWQCLATIAKEEGRQGLYGGMGAHVLRVVPNTVSVLL 1000
            + +QL SL++GG++GSIS TLT PIEVVK QLQ S+   ++P+ +AK I + +G++GF+RGL+P+L+GIFP+RA+YFWAY +TK+ L  R GD  +TH  A  AAG+ SNTITNPIWMVKTR+QLLA+ ++GQVAY GYR AV+SI  EEG  GFYKGLSASYWGC+EGCIQFVAYEKLK  L  R+     A GLP  D LPP QY   A   K + T+ TYPHEV RTRLREQA+NG+F+Y G MWQ +  I KEEGR+GLY GMG HV RVVPNT  + L
Sbjct:   27 NRNQLYSLIAGGLAGSISSTLTCPIEVVKMQLQSSNGGSANPMVIAKDIARLEGVKGFFRGLSPTLLGIFPSRATYFWAYESTKRVLTPRLGDGTLTHIGAGFAAGMVSNTITNPIWMVKTRMQLLANAAKGQVAYTGYRHAVKSILKEEGVRGFYKGLSASYWGCSEGCIQFVAYEKLKRHLEARHAEHCRANGLPVTDRLPPYQYFLGAAACKFLATVTTYPHEVVRTRLREQAKNGVFRYTG-MWQSIMLIGKEEGRKGLYAGMGTHVARVVPNTAIMFL 308          
BLAST of mRNA_C-australica_Contig_982.7.2 vs. uniprot
Match: W7THZ5_9STRA (Solute carrier family member 36 n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7THZ5_9STRA)

HSP 1 Score: 351 bits (901), Expect = 1.070e-115
Identity = 176/281 (62.63%), Postives = 213/281 (75.80%), Query Frame = 2
Query:  161 QLVSLMSGGISGSISLTLTSPIEVVKTQLQGSS-NAGSSPINVAKTIFKQDGLQGFWRGLTPSLIGIFPARASYFWAYSTTKQSLLERFGDSPITHTLAALAAGVTSNTITNPIWMVKTRVQLLADTSRGQVAYAGYRDAVRSIWAEEGFAGFYKGLSASYWGCAEGCIQFVAYEKLKSKLIERYNALREAKGLPAADSLPPVQYLGAAGLSKLMGTIATYPHEVARTRLREQARNGLFKYNGGMWQCLATIAKEEGRQGLYGGMGAHVLRVVPNTVSVLL 1000
            QL SL +GG +G+++ ++T PIEVVKTQLQ S    GS+P  VA+ I   DG +GF+RGL P+L+GI PARA+YFWAYST+KQ+L+   GD+ +TH L+ +AAGVT NTITNPIWMVKTR+QL+AD + GQ+AY  YR+A+  I+ EEG  GF+KGLSASYWGC+EGCIQFV YEKLK +L+ R N  R A+GL A + LPP   L AA  SK + T ATYPHEV RTRLREQARNG FKY   MWQ L  IAKEEGR+GLY GMG HV RVVPNT  + L
Sbjct:   87 QLYSLFAGGFAGAVASSITCPIEVVKTQLQSSRVGGGSNPFRVAREILAADGFKGFFRGLPPTLVGIIPARATYFWAYSTSKQALMPSLGDNTLTHILSGIAAGVTGNTITNPIWMVKTRMQLMADGAVGQMAYTSYRNAITRIYREEGLKGFWKGLSASYWGCSEGCIQFVVYEKLKKQLLVRNNDKRRAEGLEAKEDLPPTFTLAAAAFSKFVATTATYPHEVVRTRLREQARNGAFKYRS-MWQSLRLIAKEEGRRGLYAGMGTHVARVVPNTAIMFL 366          
BLAST of mRNA_C-australica_Contig_982.7.2 vs. uniprot
Match: A0A835YUQ3_9STRA (Mitochondrial carrier domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YUQ3_9STRA)

HSP 1 Score: 330 bits (847), Expect = 3.320e-109
Identity = 167/266 (62.78%), Postives = 196/266 (73.68%), Query Frame = 2
Query:  209 TLTSPIEVVKTQLQGSSNAGSSPINVAKTIFKQDGLQGFWRGLTPSLIGIFPARASYFWAYSTTKQSLLERFGDSPITHTLAALAAGVTSNTITNPIWMVKTRVQLLA--DTSRGQVAYAGYRDAVRSIWAEEGFAGFYKGLSASYWGCAEGCIQFVAYEKLKSKLIERYNALREAKGLPAADSLPPVQYLGAAGLSKLMGTIATYPHEVARTRLREQARNGLFKYNGGMWQCLATIAKEEGRQGLYGGMGAHVLRVVPNTVSVLL 1000
            T+T PIEVVKTQLQ SS    +P  VA+ IF   G QGF+RGL+P+L+GIFP+RASYFWAY T K  L+   GD  +TH +A L+AG T+NTIT+PIWMVKTR+QLLA  D + GQVAY GYR A+++I+ +EGF GFYKGL+ASYWGC+EGCIQFVAYEKLK  L  R+       GLP  D LPP QY  +A  SKLM TI TYPHEV RTRLREQARNG+FKY G MWQ L  I +EEG +GLY GM  HV RVVPN   + L
Sbjct:    6 TITCPIEVVKTQLQASSGVSHNPFAVARHIFNTQGAQGFFRGLSPTLLGIFPSRASYFWAYETMKSGLVPVLGDGTVTHIVAGLSAGATANTITSPIWMVKTRMQLLASIDAAHGQVAYRGYRHAIQTIYRQEGFRGFYKGLTASYWGCSEGCIQFVAYEKLKRHLEARHAEHCRRNGLPVTDRLPPHQYFLSAAASKLMATITTYPHEVVRTRLREQARNGVFKYTG-MWQSLNLIGREEGVRGLYAGMATHVARVVPNAAILFL 270          
BLAST of mRNA_C-australica_Contig_982.7.2 vs. uniprot
Match: A0A6V2SS18_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V2SS18_HETAK)

HSP 1 Score: 328 bits (840), Expect = 1.080e-106
Identity = 171/289 (59.17%), Postives = 212/289 (73.36%), Query Frame = 2
Query:  143 AKRDASQLVSLMSGGISGSISLTLTSPIEVVKTQLQGSSNAGSSPI-NVAKTIFKQDGLQGFWRGLTPSLIGIFPARASYFWAYSTTKQSLLERFGDSPITHTLAALAAGVTSNTITNPIWMVKTRVQLLA-DTSRGQVAY-AGYRDAVRSIWAEEGFAGFYKGLSASYWGCAEGCIQFVAYEKLKSKLIERYNALREAKGLPAADSLPPVQYLGAAGLSKLMGTIATYPHEVARTRLREQARNGLFKYNGGMWQCLATIAKEEGRQGLYGGMGAHVLRVVPNTVSVLL 1000
            A      L S ++GG++GSIS T+T P+EVVKTQLQ S+ AG S    +A  I K +G  GF+RGL P+L+GI P+RASYFWAY   K+ L  R GDS  TH LAA+AAGVT NTITNPIW++KTR+QLLA + S+   AY +GYR A++++  EEG+ GFYKGLSASYWGC+EGCIQFVAYE+LK  L   +N  REA GLP  ++LPP+QY+  AG +KL+ +  TYPHEVARTR+RE A +G+ KY G MWQ L  IAKEEGR GLY GMG H+ RVVPNT  + L
Sbjct:   65 ANERKKSLYSFIAGGLAGSISSTITCPVEVVKTQLQSSAVAGGSNFFQIASNILKHEGPAGFFRGLPPTLVGIIPSRASYFWAYGAAKRGLAPRLGDSTPTHFLAAIAAGVTGNTITNPIWVLKTRMQLLAGEASKQTGAYQSGYRTAIQAVLKEEGWRGFYKGLSASYWGCSEGCIQFVAYERLKGALRTAHNREREAAGLPPTETLPPLQYVLGAGAAKLVASALTYPHEVARTRMREAAVDGVTKYKG-MWQSLGLIAKEEGRAGLYAGMGTHLARVVPNTAIMFL 352          
BLAST of mRNA_C-australica_Contig_982.7.2 vs. uniprot
Match: D7FSU3_ECTSI (Mitochondrial pyrimidine nucleotide transporter n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FSU3_ECTSI)

HSP 1 Score: 327 bits (837), Expect = 2.260e-105
Identity = 165/282 (58.51%), Postives = 208/282 (73.76%), Query Frame = 2
Query:  170 SLMSGGISGSISLTLTSPIEVVKTQLQGSS-NAGSSPINVAKTIFKQDGLQGFWRGLTPSLIGIFPARASYFWAYSTTKQSLLE--RFGDS--PITHTLAALAAGVTSNTITNPIWMVKTRVQLLADTSRGQVAYAGYRDAVRSIWAEEGFAGFYKGLSASYWGCAEGCIQFVAYEKLKSKLIERYNALREAKGLPAADSLPPVQYLGAAGLSKLMGTIATYPHEVARTRLREQARNGLFKYNGGMWQCLATIAKEEGRQGLYGGMGAHVLRVVPNTVSVLL 1000
            S ++GG++GSIS+T+T PIEVVKTQLQGS+   GS+  ++A +IFK DG +GF+RGL P L GI PAR++YF+AYS +K       R GD    +T  L  + AGV  NTITNPIWMVKTR+QLLADT+ GQ+AY GY++A+ +I+ +EG  GFYKG+SASYWGC+EGC+ FV YE++K +L    N  R  KGLP  DSLPP     ++  SK+  TIATYPHEV RTRLREQARNG++KY G MWQ L  +AKEEGR+GLY GMG HV RVVPN   ++L
Sbjct:  146 SFIAGGLAGSISMTITCPIEVVKTQLQGSAVKHGSNAFSIASSIFKSDGPRGFFRGLPPGLAGIIPARSTYFFAYSRSKDFWTNNARLGDRHRDLTEVLCGVTAGVVQNTITNPIWMVKTRMQLLADTATGQIAYGGYKEAIGAIYRDEGARGFYKGMSASYWGCSEGCLYFVLYERIKRRLRRHQNEGRAEKGLPPTDSLPPAYLFASSAFSKMCATIATYPHEVMRTRLREQARNGVYKYTG-MWQSLVLVAKEEGRRGLYAGMGTHVARVVPNMAIMML 426          
BLAST of mRNA_C-australica_Contig_982.7.2 vs. uniprot
Match: A0A7S2RK71_9STRA (Hypothetical protein n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2RK71_9STRA)

HSP 1 Score: 323 bits (828), Expect = 7.670e-105
Identity = 161/292 (55.14%), Postives = 214/292 (73.29%), Query Frame = 2
Query:  161 QLVSLMSGGISGSISLTLTSPIEVVKTQLQGSSN----------AGSSPINVAKTIFKQDGLQGFWRGLTPSLIGIFPARASYFWAYSTTKQSL--LERFGDSPITHTLAALAAGVTSNTITNPIWMVKTRVQLLADTSRGQVAYAGYRDAVRSIWAEEGFAGFYKGLSASYWGCAEGCIQFVAYEKLKSKLIERYNALREAKGLPAADSLPPVQYLGAAGLSKLMGTIATYPHEVARTRLREQARNGLFKYNGGMWQCLATIAKEEGRQGLYGGMGAHVLRVVPNTVSVLL 1000
            ++++L+SGG++G+I+ +LT+P+EV+KTQLQ +S           AG  PI++AK I  QDG+ GFWRG+ P+L+GI PAR+ YF++Y  TK +L  L     S     ++  AAG+ SNT+TNPIWMVKTR+QLLAD S GQ AYA Y D +++IW EEG  GFYKG+SASYWGCAEGCIQF+ YE++K++L+++ N  RE +GLP  + LP + Y  +A + K M +IATYPHEV RTRLREQAR G+FKY+  MWQ L  IAKEEGRQGLY GMG H+ +VVPN+  + L
Sbjct:   87 KILNLLSGGVAGTIAGSLTNPLEVIKTQLQSTSASKASHGELAAAGGHPIDIAKRILAQDGIGGFWRGMKPTLVGIIPARSIYFYSYVQTKSALGKLNLPEGSVGNALISGFAAGIASNTLTNPIWMVKTRMQLLADNSVGQKAYANYGDVIQTIWKEEGVGGFYKGISASYWGCAEGCIQFILYEQIKTRLVKKQNEKREEQGLPPTNDLPKLSYFLSAAVCKGMASIATYPHEVVRTRLREQARGGVFKYHS-MWQALGLIAKEEGRQGLYAGMGVHLAKVVPNSAIMFL 377          
BLAST of mRNA_C-australica_Contig_982.7.2 vs. uniprot
Match: A0A8J9T6G8_PHATR (Hypothetical protein n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=A0A8J9T6G8_PHATR)

HSP 1 Score: 314 bits (805), Expect = 1.020e-102
Identity = 158/297 (53.20%), Postives = 212/297 (71.38%), Query Frame = 2
Query:  173 LMSGGISGSISLTLTSPIEVVKTQLQGSSNAGSS-------PINVAKTIFKQDGLQGFWRGLTPSLIGIFPARASYFWAYSTTKQSLLERFGD-SPITHTLAALAAGVTSNTITNPIWMVKTRVQLLADTSRGQVAYAGYRDAVRSIWAEEGFAGFYKGLSASYWGCAEGCIQFVAYEKLKSKLIERYNALREAKGLPAADSLPPVQYLGAAGLSKLMGTIATYPHEVARTRLREQARNGLFKYNGGMWQCLATIAKEEGRQGLYGGMGAHVLRVVPNTVSVLLLVITSRSRTSDVT 1039
            L+SGG++G+I+  LT+P+EV+KTQLQ SS A          P+ +AK I +QDG+ GF+RGL P+L+GI P+R++YF++Y   K+ L     + SP    LA   AG+TSNT+TNPIWMV+TR+QLLADT+ GQ AY GY DA+ +IW E+G  GFYKG+ ASYWGCAEG +QF+ YE+ K++L+ R NA R   GLPA + LP + Y  +A  +K+  +IATYPHEVARTR+REQAR G++KY   MWQ LA I++EEG +GLY GMG H+L+VVPN+  + L     RS  S+ T
Sbjct:    1 LLSGGLAGTIASCLTNPLEVIKTQLQSSSTAAGDMVAGRGHPVAIAKRIMEQDGVSGFFRGLPPTLVGIIPSRSAYFYSYQQIKKRLGPYLPEGSPPNAMLAGFMAGITSNTLTNPIWMVRTRMQLLADTTAGQRAYNGYGDAISTIWREDGLKGFYKGIQASYWGCAEGAVQFILYEQFKTRLLGRLNAQRAECGLPATEELPKMTYFWSAAAAKMCASIATYPHEVARTRMREQARGGIYKYKS-MWQSLAVISQEEGMKGLYSGMGVHLLKVVPNSAFMFLTYEVVRSWLSEFT 296          
BLAST of mRNA_C-australica_Contig_982.7.2 vs. uniprot
Match: A0A448Z1V6_9STRA (Uncharacterized protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448Z1V6_9STRA)

HSP 1 Score: 311 bits (796), Expect = 6.200e-100
Identity = 150/277 (54.15%), Postives = 198/277 (71.48%), Query Frame = 2
Query:  173 LMSGGISGSISLTLTSPIEVVKTQLQGSSNAGSSPINVAKTIFKQDGLQGFWRGLTPSLIGIFPARASYFWAYSTTKQSLLERFGD-SPITHTLAALAAGVTSNTITNPIWMVKTRVQLLADTSRGQVAYAGYRDAVRSIWAEEGFAGFYKGLSASYWGCAEGCIQFVAYEKLKSKLIERYNALREAKGLPAADSLPPVQYLGAAGLSKLMGTIATYPHEVARTRLREQARNGLFKYNGGMWQCLATIAKEEGRQGLYGGMGAHVLRVVPNTVSVLL 1000
            L+SGG++G+++  +T+P+EVVKTQLQ S++A S+P  +AK I   DG+ GFWRGL P+L+GI P+R++YF+AY   K  L     + SP    +A  +AG+  NT+TNPIWMV+TR+Q+L D S GQ  YAGY DA+R+I+ EEG  GFYKG++ASYWGC EG  QF+ YE+LKSKLI R N  R  +GL  +  L    Y  AA  SK +  +ATYPHEVARTR+REQAR G+FKY  GMW CL+ +AKEEG   LY GMG H+++VVPN+  + L
Sbjct:  108 LLSGGMAGTVAACITNPLEVVKTQLQSSNSAKSNPSQIAKKILDADGIPGFWRGLPPTLVGIIPSRSAYFYAYQKMKTFLNPTLPEGSPANAMIAGFSAGIVGNTLTNPIWMVRTRMQILVDASAGQKQYAGYADAIRTIFQEEGLGGFYKGITASYWGCFEGATQFIIYEQLKSKLITRQNKKRAEQGLRPSQELSKGTYFWAAACSKAIAAVATYPHEVARTRMREQARAGVFKYQNGMWGCLSVMAKEEGFNSLYSGMGVHLMKVVPNSALMFL 384          
BLAST of mRNA_C-australica_Contig_982.7.2 vs. uniprot
Match: B8BVH0_THAPS (Uncharacterized protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BVH0_THAPS)

HSP 1 Score: 307 bits (786), Expect = 9.330e-100
Identity = 154/284 (54.23%), Postives = 206/284 (72.54%), Query Frame = 2
Query:  173 LMSGGISGSISLTLTSPIEVVKTQLQGSS-------NAGSSPINVAKTIFKQDGLQGFWRGLTPSLIGIFPARASYFWAYSTTKQSLLERFGDSPITHTL-AALAAGVTSNTITNPIWMVKTRVQLLADTSRGQVAYAGYRDAVRSIWAEEGFAGFYKGLSASYWGCAEGCIQFVAYEKLKSKLIERYNALREAKGLPAADSLPPVQYLGAAGLSKLMGTIATYPHEVARTRLREQARNGLFKYNGGMWQCLATIAKEEGRQGLYGGMGAHVLRVVPNTVSVLL 1000
            L+SGGI+G+I+  +T+P+EVVKTQLQ SS       +A   P+ +AK I K DG+ GF+RGL P+L+GI PAR+ YF++Y  TK+ L     +  + + L + L+AG+  NT+TNPIW+VKTR+QLLAD+S GQ  Y GYRDA R+I+AEEG  GFYKG++ASYWGC EG  QF+ YE++K+K++ + N  RE +GL   D LP   Y  +A ++K   +I TYPHEVARTRLREQARNG+FKY G MWQ +  IAKEEG +GLY GMG H+++VVPN+  + L
Sbjct:    6 LLSGGIAGTIASCITNPLEVVKTQLQSSSAAVGDLSSAAGHPMEIAKKIMKTDGVAGFFRGLRPTLVGIIPARSVYFYSYEQTKRFLGPMLPEGSVGNALISGLSAGIAGNTLTNPIWVVKTRMQLLADSSAGQKVYTGYRDACRTIFAEEGIGGFYKGITASYWGCLEGAAQFMIYEQIKAKMLFKQNLQREEEGLLPTDKLPKFVYFFSAAIAKGTASIITYPHEVARTRLREQARNGVFKYKG-MWQTIGVIAKEEGTKGLYSGMGVHLMKVVPNSAIMFL 288          
BLAST of mRNA_C-australica_Contig_982.7.2 vs. uniprot
Match: A0A1E7FGR2_9STRA (Mitochondrial carrier n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FGR2_9STRA)

HSP 1 Score: 310 bits (794), Expect = 2.100e-99
Identity = 152/281 (54.09%), Postives = 202/281 (71.89%), Query Frame = 2
Query:  161 QLVSLMSGGISGSISLTLTSPIEVVKTQLQGSSNAGSSPINVAKTIFKQDGLQGFWRGLTPSLIGIFPARASYFWAYSTTKQSLLERFGD-SPITHTLAALAAGVTSNTITNPIWMVKTRVQLLADTSRGQVAYAGYRDAVRSIWAEEGFAGFYKGLSASYWGCAEGCIQFVAYEKLKSKLIERYNALREAKGLPAADSLPPVQYLGAAGLSKLMGTIATYPHEVARTRLREQARNGLFKYNGGMWQCLATIAKEEGRQGLYGGMGAHVLRVVPNTVSVLL 1000
            + + L+SGG +G+++  +T+P+EVVKTQLQ S+ A   PI++AKTIF  DG+ GF+RGL P+LIGI P+R++YF+AY   K  L     + SP    +A  +AG+  NT+T+PIWMV+TR+QLL DT+ GQ  YAGY DA+++I+ EEG  GFYKG+SASYWGCAEG +QFV YEK+KS+LI R N  R   GL  +  L  VQY  AA  SK +  +ATYPHEVARTR+REQA+ G+FKY  GMW+ L  +A EEG + LY GMG H+ +VVPN+  + L
Sbjct:  120 ETLKLLSGGAAGTVAACITNPLEVVKTQLQSSNKAAGHPIDIAKTIFNADGVSGFFRGLPPTLIGIIPSRSAYFYAYQRMKTFLHPTLPEGSPPNAMIAGFSAGIVGNTLTSPIWMVRTRMQLLIDTAAGQRQYAGYGDAIKTIFKEEGIGGFYKGISASYWGCAEGALQFVIYEKVKSRLITRQNKQRSEDGLVPSQELSNVQYFWAAACSKCIAAVATYPHEVARTRMREQAQAGVFKYQKGMWETLGVMASEEGFKSLYSGMGVHLCKVVPNSALMFL 400          
The following BLAST results are available for this feature:
BLAST of mRNA_C-australica_Contig_982.7.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A836CGB6_9STRA3.530e-11761.84Mitochondrial carrier domain-containing protein n=... [more]
W7THZ5_9STRA1.070e-11562.63Solute carrier family member 36 n=2 Tax=Monodopsid... [more]
A0A835YUQ3_9STRA3.320e-10962.78Mitochondrial carrier domain-containing protein n=... [more]
A0A6V2SS18_HETAK1.080e-10659.17Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
D7FSU3_ECTSI2.260e-10558.51Mitochondrial pyrimidine nucleotide transporter n=... [more]
A0A7S2RK71_9STRA7.670e-10555.14Hypothetical protein n=1 Tax=Eucampia antarctica T... [more]
A0A8J9T6G8_PHATR1.020e-10253.20Hypothetical protein n=2 Tax=Phaeodactylum tricorn... [more]
A0A448Z1V6_9STRA6.200e-10054.15Uncharacterized protein n=1 Tax=Pseudo-nitzschia m... [more]
B8BVH0_THAPS9.330e-10054.23Uncharacterized protein n=1 Tax=Thalassiosira pseu... [more]
A0A1E7FGR2_9STRA2.100e-9954.09Mitochondrial carrier n=1 Tax=Fragilariopsis cylin... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-australica_Contig_982contigC-australica_Contig_982:13502..15363 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Chrysoparadoxa australica CS_1217 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D7FSU3
Preferred nameSLC25A36
PFAMsMito_carr
Model size1146
Max annot lvl2759|Eukaryota
KEGG koko:K15116
KEGG TC2.A.29.10.4
Hectar predicted targeting categorysignal peptide
GOsGO:0000002,GO:0000959,GO:0001558,GO:0002082,GO:0003674,GO:0005215,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005740,GO:0005743,GO:0006091,GO:0006139,GO:0006140,GO:0006351,GO:0006390,GO:0006725,GO:0006807,GO:0006810,GO:0006811,GO:0006812,GO:0006839,GO:0006862,GO:0006864,GO:0006996,GO:0007005,GO:0007154,GO:0007165,GO:0008150,GO:0008152,GO:0008284,GO:0009058,GO:0009059,GO:0009719,GO:0009725,GO:0009889,GO:0009987,GO:0010033,GO:0010243,GO:0010467,GO:0010564,GO:0015215,GO:0015218,GO:0015605,GO:0015748,GO:0015931,GO:0015932,GO:0015980,GO:0016020,GO:0016021,GO:0016043,GO:0016070,GO:0017004,GO:0017062,GO:0018130,GO:0019219,GO:0019220,GO:0019222,GO:0019438,GO:0019866,GO:0022607,GO:0022857,GO:0023052,GO:0030001,GO:0030302,GO:0030307,GO:0031090,GO:0031224,GO:0031323,GO:0031930,GO:0031966,GO:0031967,GO:0031975,GO:0032774,GO:0032868,GO:0032869,GO:0032870,GO:0033108,GO:0034551,GO:0034622,GO:0034641,GO:0034645,GO:0034654,GO:0040008,GO:0040011,GO:0042127,GO:0042221,GO:0042325,GO:0042391,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043434,GO:0043467,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044422,GO:0044424,GO:0044425,GO:0044429,GO:0044444,GO:0044446,GO:0044464,GO:0045333,GO:0045927,GO:0046483,GO:0048311,GO:0048518,GO:0048522,GO:0050789,GO:0050794,GO:0050896,GO:0051128,GO:0051171,GO:0051174,GO:0051179,GO:0051234,GO:0051640,GO:0051641,GO:0051646,GO:0051716,GO:0051726,GO:0051881,GO:0055085,GO:0055114,GO:0062012,GO:0065003,GO:0065007,GO:0065008,GO:0070838,GO:0070887,GO:0071156,GO:0071310,GO:0071375,GO:0071417,GO:0071495,GO:0071702,GO:0071704,GO:0071705,GO:0071840,GO:0072511,GO:0072531,GO:0080090,GO:0090304,GO:0097659,GO:0140053,GO:1900542,GO:1901264,GO:1901360,GO:1901362,GO:1901576,GO:1901652,GO:1901653,GO:1901679,GO:1901698,GO:1901699,GO:1901700,GO:1901701,GO:1903426,GO:1903578,GO:1990314,GO:1990519,GO:1990542,GO:2000377
Exons7
Evalue1e-106
EggNOG OGsCOG4266@1|root,KOG0757@2759|Eukaryota
Ec32 ortholog descriptionmitochondrial pyrimidine nucleotide transporter
Ec32 orthologEc-19_001780.1
Descriptionpyrimidine nucleotide transmembrane transporter activity
Cds size1032
COG categoryU
BRITEko00000,ko02000
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_C-australica_Contig_982.7.2prot_C-australica_Contig_982.7.2Chrysoparadoxa australica CS_1217polypeptideC-australica_Contig_982 13543..15290 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1682588849.7666702-UTR-C-australica_Contig_982:13501..135421682588849.7666702-UTR-C-australica_Contig_982:13501..13542Chrysoparadoxa australica CS_1217UTRC-australica_Contig_982 13502..13542 -
1682588849.8337479-UTR-C-australica_Contig_982:15290..153631682588849.8337479-UTR-C-australica_Contig_982:15290..15363Chrysoparadoxa australica CS_1217UTRC-australica_Contig_982 15291..15363 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1682588849.7762618-CDS-C-australica_Contig_982:13542..136991682588849.7762618-CDS-C-australica_Contig_982:13542..13699Chrysoparadoxa australica CS_1217CDSC-australica_Contig_982 13543..13699 -
1682588849.7839146-CDS-C-australica_Contig_982:13771..138421682588849.7839146-CDS-C-australica_Contig_982:13771..13842Chrysoparadoxa australica CS_1217CDSC-australica_Contig_982 13772..13842 -
1682588849.7945144-CDS-C-australica_Contig_982:14020..140941682588849.7945144-CDS-C-australica_Contig_982:14020..14094Chrysoparadoxa australica CS_1217CDSC-australica_Contig_982 14021..14094 -
1682588849.8027427-CDS-C-australica_Contig_982:14215..143621682588849.8027427-CDS-C-australica_Contig_982:14215..14362Chrysoparadoxa australica CS_1217CDSC-australica_Contig_982 14216..14362 -
1682588849.8103788-CDS-C-australica_Contig_982:14552..146921682588849.8103788-CDS-C-australica_Contig_982:14552..14692Chrysoparadoxa australica CS_1217CDSC-australica_Contig_982 14553..14692 -
1682588849.818263-CDS-C-australica_Contig_982:14776..150631682588849.818263-CDS-C-australica_Contig_982:14776..15063Chrysoparadoxa australica CS_1217CDSC-australica_Contig_982 14777..15063 -
1682588849.826131-CDS-C-australica_Contig_982:15134..152901682588849.826131-CDS-C-australica_Contig_982:15134..15290Chrysoparadoxa australica CS_1217CDSC-australica_Contig_982 15135..15290 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_C-australica_Contig_982.7.2

>prot_C-australica_Contig_982.7.2 ID=prot_C-australica_Contig_982.7.2|Name=mRNA_C-australica_Contig_982.7.2|organism=Chrysoparadoxa australica CS_1217|type=polypeptide|length=344bp
MVGWARFFKLLSLTSALFTAHVHAKRDASQLVSLMSGGISGSISLTLTSP
IEVVKTQLQGSSNAGSSPINVAKTIFKQDGLQGFWRGLTPSLIGIFPARA
SYFWAYSTTKQSLLERFGDSPITHTLAALAAGVTSNTITNPIWMVKTRVQ
LLADTSRGQVAYAGYRDAVRSIWAEEGFAGFYKGLSASYWGCAEGCIQFV
AYEKLKSKLIERYNALREAKGLPAADSLPPVQYLGAAGLSKLMGTIATYP
HEVARTRLREQARNGLFKYNGGMWQCLATIAKEEGRQGLYGGMGAHVLRV
VPNTVSVLLLVITSRSRTSDVTHSLTHLLSNFFLSSGHHVPKL*
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mRNA from alignment at C-australica_Contig_982:13502..15363-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_C-australica_Contig_982.7.2 ID=mRNA_C-australica_Contig_982.7.2|Name=mRNA_C-australica_Contig_982.7.2|organism=Chrysoparadoxa australica CS_1217|type=mRNA|length=1862bp|location=Sequence derived from alignment at C-australica_Contig_982:13502..15363- (Chrysoparadoxa australica CS_1217)
GGAGCAGGAGCCTCTCATCCTTCCACCGAAGGGCCTTTCGCGAACAACCG CCCTGTGCGTTGGAAGACAAAGGATGGTGGGCTGGGCCAGGTTCTTCAAG CTTCTGAGCCTCACATCTGCTTTGTTCACTGCCCATGTGCATGCGAAGAG AGATGCATCGCAGCTGGTTTCACTCATGAGTGGGGGCATCAGTGGAAGTA TATCGCTTACGCTGACAAGCCCTATAGAGGTAGGACCGAAAAGCGCCTCA TGTTCAATTGAAGGGGTGCGGTTGACCCTGACCAAGCGCCTCGTTCTAAG GTGGTGAAGACCCAGCTACAAGGCAGCTCTAATGCTGGATCGTCTCCAAT CAACGTGGCCAAGACCATATTCAAACAGGATGGATTGCAAGGCTTCTGGC GAGGCTTGACGCCGTCGCTCATAGGCATCTTCCCAGCCCGTGCAAGTTAC TTCTGGGCGTACAGCACAACTAAGCAGTCGCTGCTGGAGAGATTTGGAGA CTCCCCAATCACGCACACGCTGGCAGCCCTTGCCGCAGGTGTCACATCCA ACACCATCACGAACCCCATCTGGATGGTGAAGACACGGTAAGCTCGCTGC CAATGTTAACAAACGCAGCACCAGCAGACCCTCCACCTCCAAGCCTTCCT CATCCTTGGCAACACCAATAGGGTGCAGTTGCTTGCCGATACTTCGCGTG GTCAGGTTGCATACGCTGGCTACAGGGATGCTGTCCGGTCCATTTGGGCG GAAGAAGGGTTTGCTGGGTTTTACAAAGGGTTGTCTGCGAGCTACTGGGG ATGCGCTGAAGGTCACTTCCATCATCCCACGCCATGTAGCTCTAGTGAAT TCGAGCGTCTTCAAGCTCAGCACTTACATGCCAGAGATACTGACATTTTC CTCATGTAATTCCCCCTTTTTTGGATAGTTATGGTAGGAAGCAAGCTAAC TATCCTTGCTAATACTATCCTGCCACTCTGCCATTGCCTTGGCACCAACA GGTTGCATTCAGTTTGTCGCGTACGAAAAGTTAAAGAGCAAGTTGATAGA GAGATACAATGCATTAAGAGAAGCAAAGGGCCTTCCTGCCGCAGACTCTT TACCTCCGGTGCAGTACTTAGGAGCTGCTGGCCTGAGCAAACTTATGGGT AAGTGCAGCATCTTCATTTCTTATTATTCGTTGCTGAGGCAGCTGTAGCT GTGCCTGATCCACCTCCTGCCTGTTGCCTCCCTTCAACCCCTCCCCTTCT ACGGCCATTGGCCATTCAGGTACCATTGCCACCTACCCTCATGAGGTTGC CAGAACACGTCTGAGGGAGCAAGCAAGGAATGGGTTGTTCAAGGTGAAAC ACCCTCCTCACTCGCTCACTCACTCTCTCTCCCTCTCTCTCACTAACTTG GCCTCTCATTGATTATCACCTCCAGCTCACGGGTATTGTACTGTACTGCA CTGTACCGTATTGCTGTGTTACCCTCTGTTCCACTTCTCTCATCTACGCT CTCCACTGATCGATCCAACAGTATAACGGAGGGATGTGGCAGTGCCTTGC AACCATAGCTAAGGAAGAAGGGCGCCAGGGTCTTTATGGAGGGTACCTGA ACCTAAGCCCAACTGGCAACGCTTCTAGTAACCGACTTGACCTGGGACTC CCAACTTTCCACAGGATGGGGGCACATGTGCTGCGAGTTGTGCCGAATAC AGTGAGTGTATTATTACTAGTTATTACTAGCCGCTCTCGCACAAGTGATG TCACTCACTCACTCACTCACTTGCTCTCTAATTTCTTTCTCTCTTCAGGC CATCATGTTCCTAAGCTATGAGTTCCTCTCAAAGTGGGCCTCTCAGCTGG AGGTGAATGCGG
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Coding sequence (CDS) from alignment at C-australica_Contig_982:13502..15363-

>mRNA_C-australica_Contig_982.7.2 ID=mRNA_C-australica_Contig_982.7.2|Name=mRNA_C-australica_Contig_982.7.2|organism=Chrysoparadoxa australica CS_1217|type=CDS|length=1032bp|location=Sequence derived from alignment at C-australica_Contig_982:13502..15363- (Chrysoparadoxa australica CS_1217)
ATGGTGGGCTGGGCCAGGTTCTTCAAGCTTCTGAGCCTCACATCTGCTTT
GTTCACTGCCCATGTGCATGCGAAGAGAGATGCATCGCAGCTGGTTTCAC
TCATGAGTGGGGGCATCAGTGGAAGTATATCGCTTACGCTGACAAGCCCT
ATAGAGGTGGTGAAGACCCAGCTACAAGGCAGCTCTAATGCTGGATCGTC
TCCAATCAACGTGGCCAAGACCATATTCAAACAGGATGGATTGCAAGGCT
TCTGGCGAGGCTTGACGCCGTCGCTCATAGGCATCTTCCCAGCCCGTGCA
AGTTACTTCTGGGCGTACAGCACAACTAAGCAGTCGCTGCTGGAGAGATT
TGGAGACTCCCCAATCACGCACACGCTGGCAGCCCTTGCCGCAGGTGTCA
CATCCAACACCATCACGAACCCCATCTGGATGGTGAAGACACGGGTGCAG
TTGCTTGCCGATACTTCGCGTGGTCAGGTTGCATACGCTGGCTACAGGGA
TGCTGTCCGGTCCATTTGGGCGGAAGAAGGGTTTGCTGGGTTTTACAAAG
GGTTGTCTGCGAGCTACTGGGGATGCGCTGAAGGTTGCATTCAGTTTGTC
GCGTACGAAAAGTTAAAGAGCAAGTTGATAGAGAGATACAATGCATTAAG
AGAAGCAAAGGGCCTTCCTGCCGCAGACTCTTTACCTCCGGTGCAGTACT
TAGGAGCTGCTGGCCTGAGCAAACTTATGGGTACCATTGCCACCTACCCT
CATGAGGTTGCCAGAACACGTCTGAGGGAGCAAGCAAGGAATGGGTTGTT
CAAGTATAACGGAGGGATGTGGCAGTGCCTTGCAACCATAGCTAAGGAAG
AAGGGCGCCAGGGTCTTTATGGAGGGATGGGGGCACATGTGCTGCGAGTT
GTGCCGAATACAGTGAGTGTATTATTACTAGTTATTACTAGCCGCTCTCG
CACAAGTGATGTCACTCACTCACTCACTCACTTGCTCTCTAATTTCTTTC
TCTCTTCAGGCCATCATGTTCCTAAGCTATGA
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