Homology
BLAST of mRNA_C-australica_Contig_982.2.1 vs. uniprot
Match:
D7FZR3_ECTSI (Pentapeptide repeat n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZR3_ECTSI)
HSP 1 Score: 98.2 bits (243), Expect = 2.170e-19
Identity = 94/160 (58.75%), Postives = 104/160 (65.00%), Query Frame = 2
Query: 158 TLAGVLLSFAPLCTPPPTALAISGGGLDYAGLNLKEKDFSKGSYKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSFEGVGDISGVDFTTALMQPRTQRALCQRPDAKGTNPATGVDTRESLMC 637
TLA VL++ PL P A+AISGGGLDYAGLNL +D SKG YK XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX + VGDISG DFT AL++ + LC RPDAKGTNP TG DTR+SL+C
Sbjct: 76 TLAAVLVAGVPLLVNPSPAVAISGGGLDYAGLNLTGQDLSKGKYKSKDFSGSIAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEEADLEGTIMTNAVATGSYFGNNMNNVGDISGADFTDALIRKDVAKILCARPDAKGTNPTTGTDTRDSLLC 235
BLAST of mRNA_C-australica_Contig_982.2.1 vs. uniprot
Match:
A0A6H5KFC5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KFC5_9PHAE)
HSP 1 Score: 94.7 bits (234), Expect = 8.970e-19
Identity = 102/160 (63.75%), Postives = 111/160 (69.38%), Query Frame = 2
Query: 158 TLAGVLLSFAPLCTPPPTALAISGGGLDYAGLNLKEKDFSKGSYKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSFEGVGDISGVDFTTALMQPRTQRALCQRPDAKGTNPATGVDTRESLMC 637
TLA VL++ PL P AISGGGLDYAGLNL +D S G YK XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX + VGDISG DFT AL++ + LC RPDAKGTNP TG DTR+SL+C
Sbjct: 19 TLAAVLMAGVPLLVDPSPVAAISGGGLDYAGLNLTGQDLSNGKYKSKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDLEGTIMTNAVATGSYFGNNMNNVGDISGADFTDALIRKDVAKILCARPDAKGTNPTTGTDTRDSLLC 178
BLAST of mRNA_C-australica_Contig_982.2.1 vs. uniprot
Match:
UPI00096B5543 (dynactin subunit 6-like n=1 Tax=Aethina tumida TaxID=116153 RepID=UPI00096B5543)
HSP 1 Score: 74.7 bits (182), Expect = 4.820e-12
Identity = 41/101 (40.59%), Postives = 59/101 (58.42%), Query Frame = -1
Query: 1414 LHEWPVVEERAVITNESSEDMLIGAGNLFEVGCCVRSAKIGDFNRFQPKCSIGPEVVVCDGCTVGAGLVLTGN-ITAQSGTVLYYDSNEVDAFRVNIPPHN 1713
+H P + R +++ M+IG+ N FEV C + S+KIG+ N F+ KC +GP+V V DGCTVGAG +LTG I ++ + D D F PP+N
Sbjct: 59 IHRLPFDQPR----RDTTPVMIIGSYNTFEVDCMIESSKIGNDNLFESKCYVGPKVTVTDGCTVGAGCMLTGEQILPENIVITGSDCIRRDGFEA--PPNN 153
BLAST of mRNA_C-australica_Contig_982.2.1 vs. uniprot
Match:
A0A6J2TQ95_DROLE (Dynactin subunit 6 n=1 Tax=Drosophila lebanonensis TaxID=7225 RepID=A0A6J2TQ95_DROLE)
HSP 1 Score: 73.6 bits (179), Expect = 2.150e-11
Identity = 44/127 (34.65%), Postives = 63/127 (49.61%), Query Frame = -1
Query: 1465 CERGS*YPRLMLGLGLAV*YIPAAPSSAKVGSS*SCLHEWPVVEERAVITN--------ESSEDMLIGAGNLFEVGCCVRSAKIGDFNRFQPKCSIGPEVVVCDGCTVGAGLVLTGNITAQSGTVLY 1821
CE + + + G V PS+ + + L E +VEE A I + ++S + IGA N+FEVGC V +A+IGD N F+ KC +G V V GC VGAG+ L T++Y
Sbjct: 16 CEESTLNGDITISSGCVV-----HPSATIIAEAPIVLGENCIVEEYATIAHRLKDGAASDASNTLHIGANNVFEVGCTVEAARIGDKNVFESKCFVGSGVTVSSGCVVGAGIQLRTAQVLPENTIVY 137
BLAST of mRNA_C-australica_Contig_982.2.1 vs. uniprot
Match:
A0A662WJS5_9STRA (Dynactin subunit 6 n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662WJS5_9STRA)
HSP 1 Score: 70.9 bits (172), Expect = 1.990e-10
Identity = 43/118 (36.44%), Postives = 59/118 (50.00%), Query Frame = -1
Query: 1468 CERGS*YPRLMLGLGLAV*YIPAAPSSAKVGSS*SCLHEWPVVEERAVITNESSEDMLIGAGNLFEVGCCVRSAKIGDFNRFQPKCSIGPEVVVCDGCTVGAGLVLTGNITAQSGTVL 1821
CE + +G AV P A A G L E VE+RAV++N SSE M IG NLFE GC V+S ++GD N F+PK V+ C +G+G+V+ ++L
Sbjct: 17 CEDAELLGAVSIGERCAV--HPGAALRALAGPI--VLGERSFVEDRAVLSNISSEAMAIGRENLFESGCVVQSQRVGDGNHFEPKAETRTGSVIGSNCLIGSGVVVVEGENVPDNSIL 130
BLAST of mRNA_C-australica_Contig_982.2.1 vs. uniprot
Match:
A0A7S0UFP4_9STRA (Hypothetical protein n=1 Tax=Pseudo-nitzschia delicatissima TaxID=44447 RepID=A0A7S0UFP4_9STRA)
HSP 1 Score: 72.4 bits (176), Expect = 2.430e-10
Identity = 95/162 (58.64%), Postives = 106/162 (65.43%), Query Frame = 2
Query: 152 AATLAGVLLSFAPLCTPPPTALAISGGGLDYAGLNLKEKDFSKGSYKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSFEGVGDISGVDFTTALMQPRTQRALCQRPDAKGTNPATGVDTRESLMC 637
A T A +LL+ + T A A+SGGGLD+AGL++ +DFSKG YK XXXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXXXX G DFT A P+T +C RPD KGTNP TGVDTR+S MC
Sbjct: 111 ATTAAALLLASS---TFVQAAFAVSGGGLDFAGLDISNQDFSKGDYKGKDFTQVLARNTNFAGSNLXXXXXXXXXXXXXXXXXXXXXXXXXEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEGADFTDAQFPPKTLALMCDRPDMKGTNPTTGVDTRDSAMC 269
BLAST of mRNA_C-australica_Contig_982.2.1 vs. uniprot
Match:
A0A1L8EDD9_HAEIR (Dynactin subunit 6 n=2 Tax=Haematobia irritans TaxID=7368 RepID=A0A1L8EDD9_HAEIR)
HSP 1 Score: 68.9 bits (167), Expect = 1.030e-9
Identity = 49/147 (33.33%), Postives = 72/147 (48.98%), Query Frame = -1
Query: 1441 RRLPCERGS*YPRLMLGLGLAV*YIPAAPSSAKVGSS*SCLHEWPVVEERAVITNESSED---------------MLIGAGNLFEVGCCVRSAKIGDFNRFQPKCSIGPEVVVCDGCTVGAGLVLTGNITAQSGTVLY-YDSNEVDA 1833
R + CE + + G + P+A A+ G L E +VEE A I +E+ ++IGA N+FEVGC V + KIGD N F+ K +GP+V+V +GC VGA + L TV+Y DS++ +A
Sbjct: 14 RSIVCEESILRGDITISQGCVI--HPSASILAEAGPI--ILGENCIVEEYATIAYRLTEEQKLLKETGKFETAPTLVIGASNVFEVGCLVEAHKIGDKNVFECKSYVGPDVIVTNGCIVGAAVSLKCKQQLPESTVIYGRDSSQREA 156
BLAST of mRNA_C-australica_Contig_982.2.1 vs. uniprot
Match:
A0A1B6JNV4_9HEMI (Dynactin subunit 6 (Fragment) n=2 Tax=Proconiini TaxID=565685 RepID=A0A1B6JNV4_9HEMI)
HSP 1 Score: 66.6 bits (161), Expect = 2.200e-9
Identity = 32/79 (40.51%), Postives = 47/79 (59.49%), Query Frame = -1
Query: 1501 LHEWPVVEERAVITNESSED--------MLIGAGNLFEVGCCVRSAKIGDFNRFQPKCSIGPEVVVCDGCTVGAGLVLT 1713
+ E ++EE+ I S E + IG N+FEVGC + + IGD N F+PKC +GP+VV+ +GC +GAG +T
Sbjct: 6 IGENNIIEEQTSIIYTSEEKTNIENPVPLTIGVNNVFEVGCEIHAKTIGDHNVFEPKCYVGPDVVIGNGCIIGAGCRVT 84
BLAST of mRNA_C-australica_Contig_982.2.1 vs. uniprot
Match:
A0A7S2SQY3_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SQY3_9STRA)
HSP 1 Score: 68.6 bits (166), Expect = 3.030e-9
Identity = 28/49 (57.14%), Postives = 37/49 (75.51%), Query Frame = 2
Query: 491 SFEGVGDISGVDFTTALMQPRTQRALCQRPDAKGTNPATGVDTRESLMC 637
+ + G+I G DFT ++M+ Q+ LC+RPDAKGTNP TGVDTR+SL C
Sbjct: 189 TLDQAGNIEGADFTDSIMRETMQKKLCERPDAKGTNPKTGVDTRDSLFC 237
BLAST of mRNA_C-australica_Contig_982.2.1 vs. uniprot
Match:
A0A662XXR0_9STRA (Dynactin subunit 6 n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662XXR0_9STRA)
HSP 1 Score: 71.2 bits (173), Expect = 4.430e-9
Identity = 43/118 (36.44%), Postives = 59/118 (50.00%), Query Frame = -1
Query: 1468 CERGS*YPRLMLGLGLAV*YIPAAPSSAKVGSS*SCLHEWPVVEERAVITNESSEDMLIGAGNLFEVGCCVRSAKIGDFNRFQPKCSIGPEVVVCDGCTVGAGLVLTGNITAQSGTVL 1821
CE + +G AV P A A G L E VE+RAV++N SSE M IG NLFE GC V+S ++GD N F+PK V+ C +G+G+V+ ++L
Sbjct: 17 CEDAELLGSVSIGERCAV--HPGASLRALAGPI--VLGERSFVEDRAVLSNASSEVMAIGRENLFESGCLVQSQRVGDGNHFEPKAEARAGSVIGSNCLIGSGVVVAEGENVPDNSIL 130
The following BLAST results are available for this feature:
BLAST of mRNA_C-australica_Contig_982.2.1 vs. uniprot
Analysis Date: 2022-09-19 (
Diamond blastx: OGS1.0 vs UniRef90 )
Total hits: 25
0 1 Expect = 2.17e-19 / Id = 58.75 Expect = 8.97e-19 / Id = 63.75 Expect = 4.82e-12 / Id = 40.59 Expect = 2.15e-11 / Id = 34.65 Expect = 1.99e-10 / Id = 36.44 Expect = 2.43e-10 / Id = 58.64 Expect = 1.03e-9 / Id = 33.33 Expect = 2.20e-9 / Id = 40.51 Expect = 3.03e-9 / Id = 57.14 Expect = 4.43e-9 / Id = 36.44 Sequence D7FZR3_ECTSI A0A6H5KFC5_9PHAE UPI00096B5543 A0A6J2TQ95_DROLE A0A662WJS5_9STRA A0A7S0UFP4_9STRA A0A1L8EDD9_HAEIR A0A1B6JNV4_9HEMI A0A7S2SQY3_9STRA A0A662XXR0_9STRA Pages
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Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-australica_Contig_982.2.1
>prot_C-australica_Contig_982.2.1 ID=prot_C-australica_Contig_982.2.1|Name=mRNA_C-australica_Contig_982.2.1|organism=Chrysoparadoxa australica CS_1217|type=polypeptide|length=211bp
MKGAFAFSLLLAWGVESFFTGPSHLHAGPGVATNLSMAGGSAAQRAAAAT back to top mRNA from alignment at C-australica_Contig_982:2468..5649+
Legend: UTR polypeptide CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_C-australica_Contig_982.2.1 ID=mRNA_C-australica_Contig_982.2.1|Name=mRNA_C-australica_Contig_982.2.1|organism=Chrysoparadoxa australica CS_1217|type=mRNA|length=3182bp|location=Sequence derived from alignment at C-australica_Contig_982:2468..5649+ (Chrysoparadoxa australica CS_1217)AGAGGGGAAG ATGAAGGGCGCATTCGCATTTTCACTTTTGTTGGCGTGGG
GGGTTGAGAGCTTCTTTACAGGGCCTTCGCATCTTCATGCGGGCCCGGGT
GTAGCAACAAACCTAAGTATGGCGGGAGGAAGTGCAG GTACCTCCTTTCC
GCTGCTATTACCAGGCTTGCATTTCTGGGCTAACTCTTTTCTCCTCTTCC
AGCGCAAAGGGCTGCCGCGGCCACCTTGGCAGGTGTCTTACTCAGTTTCG
CCCCCCTATGCACGCCACCTCCGACGGCTTTGGCTATCAGCGGGGGAGGC
TTGG GTAAGTACTTTCTACTCTGCTCTCAACCTCTCCCGCCTCTCAAGGC
CTCTTGAAGGCCTCTTGAAATTGCCCCCCTCCCTGCCTTGCTCACCCTTC
CTGTTCCCCCTTCTCCTTCTTCCCAGATTATGCCGGACTGAACCTGAAAG
AAAAGGATTTCAGCAAAGGCAGCTACAAGGGCAAGGATTTCAGCGGAGTG
ATTGCAAAGGCAGTGCACTTCAACGGCAGTGACTTGCGAGGGTCCCGCTT
CTTCAAG GTGGGCCATCCCATCACAGCCACCCAGCTGAACCAGCCCCCCT
ATAACCAGGATATCCTGGATATCTTGGATACCAACCCTACCGCACTCAAC
TTGTTTGCAGGCTGACCTGGAGAAGGCTGACTTCACTGGGGCCAACTTGA
GCACGGCATCATTGGAGCAGGCAAACTTGGAGGGCACTGTATTGACTGAT
GCCATATTGGAGGATGCTTACCTCTCGGATTCGTTTGAAGGTGTAGG GTA
AGTGCTGGGCTATGATGTTGATGAGAGAGTGGGACTTGATGATAAGTAAT
GCCAGCGAAGCGGGATATACTAAACAATAGACCTTGGTTCTGATGCACCT
TGACAGGGATATTTCTGGGGTGGACTTCACTACTGCTTTGATGCAGCCCA
G GTAGCTTTATCCCCACCTTGCAAGCCGCTGCGCTCAGATGGGTTCTGTC
GGTGATGACAGTGACCTTTAGATGTCCAAACTGCAAACTGCTGACCTTGC
ACTCACTCATCTTGCTTCACTCATCACATAGGACACAGAGGGCCTTGTGC
CAGAGGCCTGATGCCAAGGGAACTAACCCTGCTACTGGAGTTGACACACG
AG GTAAGTTCAACTTACTTGACATTTATTATTGGGATGAATGAGGCTTGG
CCCTTGATCCTTCTGATCTCTGACAGCTGCTCGCTAACTAGCTACATCCC
TTTCGCAGAGAGCTTGATGTGTAAGTAA AATGCAACCAACCAGAGAGGGA
GAGAAAGAAGTGCTTAAGCACATCCGCTGGGGGAGTGAAACAATAATTAT
CAACATGGTAAACCAAGATCTATGCCACTATGTCACCGGCACTGGCAGAG
CTTGTTTTGCACCTGATACAAAATAATGAGTGCTGGGGCAGCCTGCCAAG
CTGGCAAGAGCTTAAAAGAACTAACGGAAAGAAGGATCTAGACATGTACA
TCTAGACACCTCCCCCCTTGCTCACTGAAAGCTGAGGGAGATTTCACCTC
ATATCTTGCCTGCACGAGCTACCTGGACCCTCCAAAGGTAGCTGCTCTTG
AGGCCAGCGACCTCCGTCCTTTCACCTTTCTCTGCGCTAACTGAACAGTT
GAGAGCTGGGCTGGTAAACCTCGTAACCTGGTTCTGCACACTCTGATCAT
GCCAGAATAGCCCGTGCACTTAGTGCCCACACGTGTCAAAGCAATAGTCT
TTGCCACAGGAATGCACTCATATCTTCACGTCTTTGTTCTTCATATCTTG
AGTCGGTGGTGCTGGGGGATCCAGGCACAATGCTCGTCCGTAAGTCACTA
TCAGGCTGACAAAAGTGGGCAAGCTAGGGATTCACTTGGCAAATAAGTCA
AAAGGTATGGTATTGTTTAATATGAACGGTGTGGTGTAGGTCCTAAAGCA
TATGTATGCTCAAAACCAACCTTGCCCAAGTATGTCTTCTTCTTGGGATT
GGCTATGGCTTGCCTGTATGCCTCAAGATTTGCCTCATTCCAGTTCCGAT
TATGGGGGGGGATGTTGACACGGAAGGCATCAACTTCATTG CTGGAAGTT
AAGGTGGGGGCAAAGAAAAGATAAGCATTGGGAAGCAAAGCAAGGCCAAA
TGATCTGCCTGGCCTCAGGCATTCCAATGAGGAGAACGGTTCAAGGCTAA
TCTGAGTCATTTATTTCATAGCTAAGCTGCTGCCTTGCACCATTCAGCAC
ACCACATTGATATAACCCCTTTGGCATACCTGTCATAATACAGCACCGTG
CCACTTTGTGCAGTGATATTCCCCGTCAGCACCAGGCCGG CACCTGCATG
ATGGCACAGACATCTGTCAGAAAAGCCACAGCGAAAGAACCTGCCGCGTT
AGCTTCTGCAGTGAAACCCTCACCTACTGTACACCCATCACACACCACCA
CCTCAGGCCCTATGCTGCACTTGGGTTGAAACCTGTTGAAGTCCCCAATC
TTGGCGCTCCTCACGCAGCAACCA ACCTGCAAAGCCAGGATTAGGTATAC
CATACTGCAAGGTGCATGGCGGTGAGTCAATCTCATGGAACGTTGGTGAT
CCACTCATCCCACCTCAAACAAATTCCCTGCTCCGATAAGCATGTCTTCG
CTTGACTCATTTGTGATGACTGCTCGCTCTTCCACCACTGGCCATTC GTG
AGTCAGGATGATAAGGTTGAGACAAGGGCGAGGTGAGGAGAGCTGAGGGA
GAAGTGGGAGGACAGTCCTCTCATGGCAAAGCATCACTCACCGCAATCCT
CTCCAAAGATGATTGCACCTCCTCCTGGTGAGAGTGTGTAGGAGCTTGTT
TCTTAGTAGGCAGTGGAGGAGATGAAGACAGCTCTAGCTACTTCCTACCT
TGGCTGACGATGGTGCAGCAGGGATGTACTATACAGCCAGGCCCAATCCT
AACATT GCCTTGGGGAAAGGGTGGAGGAGAGTGAGGAGGGTGAAGTAGAG
GTGTGCAAGGGAGAGCAGAACCTTGGATATCAGCTTCCTCGCTCACAAGG
CAGCCTTCTCCTATGACGACCTCATCCTCAGCCATCTTCACTCAAGGAGA
AGGTCAAAAGCTCCACGACCCCAAGCAGCAAACGCGCGCAAGGATAATGC
AAGCGCAAAGTGCAAAGCTCAAAAGATCGCGG back to top Coding sequence (CDS) from alignment at C-australica_Contig_982:2468..5649+
>mRNA_C-australica_Contig_982.2.1 ID=mRNA_C-australica_Contig_982.2.1|Name=mRNA_C-australica_Contig_982.2.1|organism=Chrysoparadoxa australica CS_1217|type=CDS|length=633bp|location=Sequence derived from alignment at C-australica_Contig_982:2468..5649+ (Chrysoparadoxa australica CS_1217) back to top