mRNA_C-australica_Contig_981.3.5 (mRNA) Chrysoparadoxa australica CS_1217

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_C-australica_Contig_981.3.5
Unique NamemRNA_C-australica_Contig_981.3.5
TypemRNA
OrganismChrysoparadoxa australica CS_1217 (Chrysoparadoxa australica CS_1217)
Homology
BLAST of mRNA_C-australica_Contig_981.3.5 vs. uniprot
Match: D8LFK5_ECTSI (WD66_PHYPO66 kDa stress protein (P66) n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LFK5_ECTSI)

HSP 1 Score: 540 bits (1392), Expect = 9.950e-183
Identity = 331/641 (51.64%), Postives = 412/641 (64.27%), Query Frame = 1
Query:    1 MAKTAAACLNHPSFKGHCVPNPSTERGNNVHIGAHPKDPILLYPSGKYIIARNLEDPSQSFVYRGHNAVTTVAKFSPNGFWVASADATGKVRVWAWDNPEHNLKIEIFGIGGAIKDLXXXXXXXXXXXXXXXXXXXXXXXXXXTGSALGEVVGHNKRVVSCDYRSERPFKIMTGSEDMRTIFFKGPPFSLDHSNKDQHSNFINCVRFSPDCSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCKLWDVTSAP-GYLITTWTLGAE--VADMQCGVVWMRGQILSLSLSGDLNELKEGAAEPVKVIQAHQVAVTAMCPTPT------ASGEFITGSFDGVVCRXXXXXXXXXXXXXXXXXXXXXAAHSNKVTSIGLAKDGIVSVGWDDSLRVASL-----STGA--YTAVVPLEGQPCSVSCSPSSDLAAVATTKGVVLSRGATIVKTLETTYTPASVALL-GEEEVAVGADDNKIYIYALSGADLTQTQVIEGHRGKVTALAYSPDQLYLAAGDAAKEVNVWTRGS-WDAKVQGLWQFHXXXXXXXXXXXXXXXXXXXXXXXXXXXXSLAKTRRRINYPFSHKEGVVGLAWSNPGELVSAGADHCIAKWDILEDRTVF 1869
            MA     C++HPSF  H  PNPSTERG+N+ +G HPK+  ++YPSGK+I+ R+++DP+  FVYRGHN+ TTVAKFSPNGFWVASAD TGKVR+WAWDNPEH LKIE+FG+GGAIKDL                          TGS LGEVVGH+KRV+SCDYR  RP++IMTGSED RTIF++GPPF +DHSN +QH+NF+NCVRFSPD S                                       XXXXXXXXXXXXXX           G    TW++     V DMQ  V +   Q++S+SL+G++N L  G+  P  V QAHQ A+TAM  +P       A+G+ +TGSF GV+C                      A HSNK+T I     G+VSVGWDD+LR+A L     S G   +TA V   GQPC V+ +  SDL AVAT +GV L RG T    L  TYTP+S+A+  G  E+AVG+ + KIY+Y  +G +L +T+V++GHRG+VT +AYSPD   LAAGDAA+EV VW  G  WDA+V+GLWQFH  XXXXXXXXXXXXXXXXXXXXXXXXXX+ AK RRR++Y F++K+GV GLAW + G + SAG DHC+A WDI +D +VF
Sbjct:    1 MASNIKPCVDHPSFVSHWAPNPSTERGDNLVLGTHPKESKIIYPSGKFIVVRDVKDPTDVFVYRGHNSKTTVAKFSPNGFWVASADITGKVRIWAWDNPEHQLKIEVFGLGGAIKDLAWGPESKRIVCCGAGSGVNARAFMWDTGSNLGEVVGHSKRVISCDYRQVRPYRIMTGSEDHRTIFYQGPPFKMDHSNNNQHTNFVNCVRFSPDGSKIATCSSDKKVWLYDGKTGEPLSTLGEAAGAHAGSIYSLXXXXXXXXXXXXXXXXXXXXXXXXXGACTHTWSISDSPGVGDMQVAVAFCGEQLVSVSLNGNVNMLDAGSERPRDVYQAHQGAITAMTRSPVSAGGGAAAGKILTGSFTGVLCAWDPATGGAKRCTGGKAAPVTGAVHSNKITGIAACSAGVVSVGWDDTLRLAPLDGESGSGGGPVFTASVGTTGQPCGVAANADSDLVAVATNQGVTLLRGTTPAVGLSATYTPSSIAMAPGAGEIAVGSKEGKIYVYETAGDELRETKVVDGHRGEVTCVAYSPDGTLLAAGDAAREVTVWRAGGDWDAEVRGLWQFHTAXXXXXXXXXXXXXXXXXXXXXXXXXXNPAKPRRRVHYTFANKDGVEGLAWLSDGVVASAGGDHCVATWDITKDISVF 641          
BLAST of mRNA_C-australica_Contig_981.3.5 vs. uniprot
Match: A0A836C9B9_9STRA (66 kDa stress protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C9B9_9STRA)

HSP 1 Score: 523 bits (1348), Expect = 2.550e-176
Identity = 287/626 (45.85%), Postives = 357/626 (57.03%), Query Frame = 1
Query:    1 MAKTAAACLNHPSFKGHCVPNPSTERGNNVHIGAHPKDPI-LLYPSGKYIIARNLEDPSQSFVYRGHNAVTTVAKFSPNGFWVASADATGKVRVWAWDNPEHNLKIEIFGIGGAIKDLXXXXXXXXXXXXXXXXXXXXXXXXXXTGSALGEVVGHNKRVVSCDYRSERPFKIMTGSEDMRTIFFKGPPFSLDHSNKDQHSNFINCVRFSPDCSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCKLWDVTSAPGYLITTWTLG--AEVADMQCGVVWMRGQ-ILSLSLSGDLNELKEGAAEPVKVIQAHQVAVTAMCPTPTASGEFITGSFDGVVCRXXXXXXXXXXXXXXXXXXXXXAAHSNKVTSIGLAKDGIVSVGWDDSLRVASLSTGAYTAVVPLEGQPCSVSCSPSSDLAAVATTKGVVLSRGATIVKTLETTYTPASVALLGEEEVAVGADDNKIYIYALSGADLTQTQVIEGHRGKVTALAYSPDQLYLAAGDAAKEVNVWTR--GSWDAKVQGLWQFHXXXXXXXXXXXXXXXXXXXXXXXXXXXXSLAKTRRRINYPFSHKEGVVGLAWSNPGELVSAGADHCIAKWDILEDR 1860
            MA     C+++PSF GH +PNPST RGNN H+G HPK P  ++YPSGK+II R+L+DP+  FVYRGHNAV TVAKFSP+G WVAS D TGKVRVW+WDNPEH LK EI  I G +KDL                          TG+ LGE+VGH K V+S DYR  RPFKIMT SEDMRT+FFKGPPFS+DHSNKDQHSNF+N VRFSPD +                                                     C+LW+V S    +  TWT     EV DMQ   V +      S+S+ GD++ L      P KVI AHQVAVTAM P+ T +G  +TGSFDGVVC                      AAHSNKV+ I ++  GIVSVGWDD++R+A     AYT    L GQPC VS +  S+LAAV T+ GV + R   +V  L   YTP SV+L GE EVAVG DD  + IYALSG+ LT+T+ +   RG   ++A+SPD  +LA GD+ KE+ V+ R  G+WD  VQGLWQFH                            S+AK R+RI Y F+H++G+ GL W +   L SAG DHC+A+WD+ +++
Sbjct:    1 MANLVKPCIDNPSFLGHFIPNPSTVRGNNFHMGVHPKQPNKIVYPSGKFIIVRDLDDPAAGFVYRGHNAVATVAKFSPSGCWVASGDTTGKVRVWSWDNPEHGLKAEINAIAGPVKDLAWDSESKRIVAVGEGGVNMRAFTWD-TGNNLGELVGHAKGVLSVDYRQARPFKIMTASEDMRTLFFKGPPFSMDHSNKDQHSNFVNVVRFSPDGARIATAGSDYKVWIYDGTTGEPVHELGAAHTGSIFGLSWCPDSNHLVTASADKTCRLWNVDSKA--VEHTWTFADAPEVGDMQVSCVTVSADHAASVSVRGDISLLDLQQERPAKVISAHQVAVTAMSPS-TLNGALVTGSFDGVVCAWAANGVATRLQGQLGAKTICGAAHSNKVSGIAVSAAGIVSVGWDDTIRLAPAGGHAYTESASLNGQPCGVSANAGSELAAVVTSSGVAVYRKTALVAELSVNYTPKSVSLFGESEVAVGGDDGIVRIYALSGSTLTETKALPPVRGAAASVAFSPDGAHLAVGDSQKEIVVYARAGGAWDPLVQGLWQFHTSTVAALAWSPDNTLLASGGPDETIYVWSIAKPRKRITYKFAHRDGISGLCWVDADTLASAGGDHCVARWDVGKEK 622          
BLAST of mRNA_C-australica_Contig_981.3.5 vs. uniprot
Match: M4B2S9_HYAAE (Uncharacterized protein n=27 Tax=Peronosporaceae TaxID=4777 RepID=M4B2S9_HYAAE)

HSP 1 Score: 359 bits (921), Expect = 1.350e-112
Identity = 284/614 (46.25%), Postives = 374/614 (60.91%), Query Frame = 1
Query:   31 HPSFKGHCVPNPSTERGNNVHIGAHPKDPILLYPSGKYIIARNLEDPSQSFVYRGHNAVTTVAKFSPNGFWVASADATGKVRVWAWDNPEHNLKIEIFGIGGAIKDLXXXXXXXXXXXXXXXXXXXXXXXXXXTGSALGEVVGHNKRVVSCDYRSERPFKIMTGSEDMRTIFFKGPPFSLDHSNKDQHSNFINCVRFSPDCSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCKLWDVTSAPGYLITTWTLGA---EVADMQCGVVWMRGQILSLSLSGDLNELK-EGAAEPVKVIQAHQVAVTAMCPTPTASGEFITGSFDGVVCRXXXXXXXXXXXXXXXXXXXXXAAHSNKVTSIGLAKDGIVSVGWDDSLRVASLSTGAYTAVVPLEGQPCSVSCSPSSDLAAVATTKGVVLSRGATIV-KTLETTYTPASVALLGEEE-VAVGA-DDNKIYIY-ALSGADLTQTQVIEGHRGKVTALAYSPDQLYLAAGDAAKEVNVWTRGSWDAKVQGLWQFHXXXXXXXXXXXXXXXXXXXXXXXXXXXXSLAKTRRRINYPFSHKEGVVGLAWSNPGELVSAGADHCIAKWDI 1848
            +P+ K    PNP+T RG    +G HPK+P ++Y SGK ++ RNLEDP+ +FVY+GH+  TTVAKFSPNG+WVAS D +GKVRVW++DNPEH LK+E+    G IKDL                          TG+++GE+VGH KR++S DYR  RPF+IMT SED     ++GPPF    +N + H+NF+NCVRFSP  +             XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX                +T G    +V DMQ  V W +  ++SLSLSG+LN L     ++P + +Q HQV++ ++   PT     +TGS+DGVVC                      A H+ K+T I    + I S GWDD LR A+     Y A   L  QP  V+ + S  LA V+T KGV L R   +V +T E ++TP  VA+   E+ VAVG+ +D KI+++  ++G+ L ++  I GH G +T++++SPD   LAAGD  +EV VW   S  AKVQG+W +H   XXXXXXXXXXXXXXXXXXXXXXXXX      ++  + FSHK+GV G+++ +  ELVS G D C+  WD+
Sbjct:    6 NPTEKATIGPNPTTNRGAPSVLGVHPKEPKIIYCSGKLVVVRNLEDPTDTFVYKGHHEPTTVAKFSPNGYWVASGDVSGKVRVWSYDNPEHTLKLEVPVFAGEIKDLSWDPESKRIVAVGDGRGFMARVFTYDTGNSIGEIVGHQKRILSVDYRPTRPFRIMTASEDFNVCVYEGPPFKFKQNNSNLHTNFVNCVRFSP--NGDFAVSVGSDKLMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFTFGGSKPQVKDMQVAVAWCQNHLISLSLSGNLNFLDLNNPSQPKQTVQGHQVSILSLATEPTQH-RILTGSYDGVVCSWTSKVATTLAG----------AHHTAKITGISATSNQIASSGWDDQLRFAN--DNEYIATEALNAQPNGVALTESG-LAVVSTNKGVKLLRDQKLVFETPEFSWTPTCVAISPSEDLVAVGSQEDMKIHLFDVVNGSSLVESGEILGHLGALTSVSFSPDGSLLAAGDTYREVRVWDVASRSAKVQGMWVYHSTRXXXXXXXXXXXXXXXXXXXXXXXXXXXNSPMKKRVFDFSHKDGVTGVSFVSETELVSVGNDACLNYWDL 603          
BLAST of mRNA_C-australica_Contig_981.3.5 vs. uniprot
Match: A0A485KKR6_9STRA (Aste57867_8573 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KKR6_9STRA)

HSP 1 Score: 357 bits (915), Expect = 1.520e-111
Identity = 249/629 (39.59%), Postives = 339/629 (53.90%), Query Frame = 1
Query:    1 MAKTAAACLNHPSFKGHCVPNPSTERGNNVHIGAHPKDPILLYPSGKYIIARNLEDPSQSFVYRGHNAVTTVAKFSPNGFWVASADATGKVRVWAWDNPEHNLKIEIFGIGGAIKDLXXXXXXXXXXXXXXXXXXXXXXXXXXTGSALGEVVGHNKRVVSCDYRSERPFKIMTGSEDMRTIFFKGPPFSLDHSNKDQHSNFINCVRFSPDCSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCKLWDVTSAPGYLITTWTLGAEVADMQCGVVWMRGQILSLSLSGDLNELK-EGAAEPVKVIQAHQVAVTAMCPTPTASGEFITGSFDGVVCRXXXXXXXXXXXXXXXXXXXXXAAHSNKVTSIGLAKDGIVSVGWDDSLRVASLSTGAYTAVVPLEG-QPCSVS----CSPSSDLAAVATTKGV-VLSRGATIVKTLETTYTPASVALLGE-EEVAVGAD-DNKIYIYALSGAD----LTQTQVIEGHRGKVTALAYSPDQLYLAAGDAAKEVNVWTRGSWDAKVQGLWQFHXXXXXXXXXXXXXXXXXXXXXXXXXXXXSLAKTRRRINYPFSHKEGVVGLAWSNPGELVSAGADHCIAKWDI 1848
            M+      L +P+ K    P+P+T RG+   +  HPK+P ++Y +GK ++ R+L +P   F+Y+GHN  TTVAKFSPNG+WVASAD TGKVRVW++DNPEH LK+E+    G +KDL                          TG+++GE+VGH KR++S DY+  RPF+I+T SED     F+GPPF   HS    H+NF NCVR+SPD                                                        KLWDV S    ++TT+T G  V DMQC V W+   ++SLSLSGDLN L     + P +V+Q HQV++ A+   P  S   +TGS+DG V                       A H+ KVTSI + K  + S GWDD +R  SL+   Y+  V L G QP  V+     S  S L AV T KGV +++ G    ++   T+TP SVA+     +VAVG D D  I+++ +  A+    L +T +  GH G +T++A+SPD   LAAGD+A+EV VW   +  AK+ G W   XXXXXXXXXXXXXXXXXXXXXXXXXXXX   K   R  + ++HK+GV+G+ +    +L+S G D  +  W +
Sbjct:    1 MSNNPTERLPNPNLKATFSPHPTTTRGSPTVLNVHPKEPKIIYCTGKLVVVRDLVNPVDCFIYKGHNDATTVAKFSPNGYWVASADVTGKVRVWSYDNPEHTLKVEVPVFAGEVKDLAWDPESKRIAAVGDGRNTMSRVFMWDTGNSIGEIVGHAKRIMSVDYKPTRPFRILTCSEDFNVCAFEGPPFKFKHSIP-AHTNFANCVRYSPDGVHAISVGSDKGMVLYDAKTSEKLAVFPVEHSVSIYSVAWSPDSKQVLTASGDKTVKLWDVASLS--VVTTFTFGTAVQDMQCSVAWVGDFLVSLSLSGDLNYLDVTNPSTPSRVLQGHQVSLQAVAVDPE-SATIVTGSYDGAVVAWKNSTGHRLGG----------APHTAKVTSIDVHKGLVASGGWDDVVRFGSLADATYSGSVGLNGAQPSDVALATHASSGSILCAVGTNKGVKLIADGQLAFESPNFTWTPTSVAISPNGAQVAVGGDEDRNIHLFDIVFANGAFSLVETSIFTGHNGALTSIAFSPDGSLLAAGDSAREVRVWEVATATAKIAGQWVHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKPANRHKFEYTHKDGVMGIKFMADDQLISVGNDSSVHTWFV 615          
BLAST of mRNA_C-australica_Contig_981.3.5 vs. uniprot
Match: A0A0P1A7D1_PLAHL (WD40 repeat stress protein/actin interacting protein n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1A7D1_PLAHL)

HSP 1 Score: 356 bits (914), Expect = 1.800e-111
Identity = 283/613 (46.17%), Postives = 371/613 (60.52%), Query Frame = 1
Query:   34 PSFKGHCVPNPSTERGNNVHIGAHPKDPILLYPSGKYIIARNLEDPSQSFVYRGHNAVTTVAKFSPNGFWVASADATGKVRVWAWDNPEHNLKIEIFGIGGAIKDLXXXXXXXXXXXXXXXXXXXXXXXXXXTGSALGEVVGHNKRVVSCDYRSERPFKIMTGSEDMRTIFFKGPPFSLDHSNKDQHSNFINCVRFSPDCSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCKLWDVTSAPGYLITTWTLGA---EVADMQCGVVWMRGQILSLSLSGDLNELK-EGAAEPVKVIQAHQVAVTAMCPTPTASGEFITGSFDGVVCRXXXXXXXXXXXXXXXXXXXXXAAHSNKVTSIGLAKDGIVSVGWDDSLRVASLSTGAYTAVVPLEGQPCSVSCSPSSDLAAVATTKGVVLSRGATIV-KTLETTYTPASVALLGEEE-VAVGA-DDNKIYIYALSG-ADLTQTQVIEGHRGKVTALAYSPDQLYLAAGDAAKEVNVWTRGSWDAKVQGLWQFHXXXXXXXXXXXXXXXXXXXXXXXXXXXXSLAKTRRRINYPFSHKEGVVGLAWSNPGELVSAGADHCIAKWDI 1848
            PS K    PNP+T RG    +  HPK+P L+Y SGK +I RNLEDP+ +FVY+GHN  TTVAKFSP+G+WVAS D +GKVRVW++DNPEH LK+EI    G IKDL                          TG++LGE+VGH KR++S DYR  RPF+IMT SED     ++GPPF    +N + H+NF+NCVRFSP  +             XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX                +TLG    +V DMQ  V W +  ++SLSLSGDLN L     + P +++Q HQV++ ++   P A    +TGS+DGVVC                        H+ K+T I    + + S  WDD LR ++     YTA   L  QP  V+ + S  LA V+T KG+ L +   ++ +T E ++TP  VA+   E+ VAVG+ +D KI+++ ++  A L ++  I GH G +T++A+SPD  +LAAGD  +EV VW   +  AKVQG+W +H   XXXXXXXXXXXXXXXXXXXXXXXXX      ++ ++ FSHK+GV  + + +  ELVS G D C+  WD+
Sbjct:   14 PSLKATVGPNPTTNRGAPSVLSIHPKEPKLIYCSGKLVIVRNLEDPTDTFVYKGHNEPTTVAKFSPSGYWVASGDVSGKVRVWSYDNPEHTLKLEIPVFAGEIKDLSWDPESKRIVAVGDGRGLMARVFMWDTGNSLGEIVGHQKRILSVDYRQTRPFRIMTASEDFNVCVYEGPPFKFKQNNNNLHTNFVNCVRFSP--NGEFAVSVGSDKLMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFTLGGTKPQVKDMQVAVAWCQNYLISLSLSGDLNFLDVNNPSRPKQIVQGHQVSIVSLATQP-AQNRLLTGSYDGVVCSWTSKTAKALEGTH----------HTAKITGIAANSNQLASCAWDDQLRFSN--DCEYTASTALNAQPNGVAITESG-LAVVSTNKGLKLVQDQKVIFETPEFSWTPTCVAISPSEDLVAVGSQEDMKIHLFDVANKASLVESGEIAGHLGALTSVAFSPDGSHLAAGDTYREVRVWDVATRSAKVQGMWVYHSTRXXXXXXXXXXXXXXXXXXXXXXXXXXXNNPMKKRSFEFSHKDGVTAVKFLSETELVSVGNDACVNYWDL 610          
BLAST of mRNA_C-australica_Contig_981.3.5 vs. uniprot
Match: A0A7S1U9R9_9STRA (Hypothetical protein n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1U9R9_9STRA)

HSP 1 Score: 353 bits (906), Expect = 3.390e-110
Identity = 204/603 (33.83%), Postives = 298/603 (49.42%), Query Frame = 1
Query:   61 NPSTERGNNVHIGAHPKDPILLYPSGKYIIARNLEDPSQSFVYRGHNAVTTVAKFSPNGFWVASADATGKVRVWAWDNPEHNLKIEIFGIGGAIKDLXXXXXXXXXXXXXXXXXXXXXXXXXX-TGSALGEVVGHNKRVVSCDYRSERPFKIMTGSEDMRTIFFKGPPFSLDHSNKDQHSNFINCVRFSPDCSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCKLWDVTSAPGYLITTWTLGAEVADMQCGVVWMRGQILSLSLSGDLNELKEGAAEPVKVIQAHQVAVTAMCPTPTASGEFITGSFDGVVCRXXXXXXXXXXXXXXXXXXXXXAAHSNKVTSIGLAKDGIVSVGWDDSLRVASLSTGAYTAVVPLEGQPCSVSC-SPSSDLAAVATTKGVVLSRGATIVKTLETT-YTPASVALLGE-EEVAVGADDNKIYIYALSGADLTQTQVIEGHRGKVTALAYSPDQLYLAAGDAAKEVNVWTRGSWDAKVQGLWQFHXXXXXXXXXXXXXXXXXXXXXXXXXXXXSLAKTRRRINYPFSHKEGVVGLAWSNPGELVSAGADHCIAKWDILED 1857
            +PSTERG NVH+G HPK+  ++Y SGK ++ R+++DPS  FVYRGHNA TTVAKF+PNG+WV SAD++GK+ VW+WDNPEH +K E   + G I DL                           +G+A+GE++GH   V+S  Y+  RP+++++  ED   I + GPPF   H+++D HSN++ CVRF+PD                                                        K+W+V +     +  +T G ++ +M+ GVV+   +I+SLSL GD+   + G   P+ V Q HQ  + A     + SG   TGS DGV C                      A H  +V  +     G+VS G+DD++R A L + AY       GQP  +    PSSD  A+ T++G+ + +G      LE   Y    VA+ G  + VAVGA +  IYIY+  G+ LTQT ++ GHRG+V++LA+SP   +LAAGD+ KEV V     W  K+QG W FH                            +L KT ++    + H  GV  +A+ +   LV+ G D C+  W++ E+
Sbjct:   23 SPSTERGYNVHLGTHPKENKVIYCSGKNVVVRSIDDPSDCFVYRGHNAATTVAKFAPNGYWVCSADSSGKIMVWSWDNPEHIVKYEGILMAGKITDLEWGPESKKITVAGDGGGGLSCKTIMWDSGNAVGEMIGHTANVLSIAYKPSRPYRVLSAGEDNAVIMYNGPPFRQAHTSRD-HSNYVQCVRFAPDGKTAASVSNDKKIIFYDAKEGTVTGTIDNAHAGSIYSCSWSPDSTMLATSSADKKVKVWNVETKEA--VAEFTDGTDLTNMKVGVVYKEDKIISLSLGGDITVWQVGQDAPLVVFQGHQTPIVAAA-VDSESGTIFTGSSDGVCC--YWNAGVGSKFGGQIPRSITGAIHGGRVAGMAFTASGVVSAGYDDTIRFADLGSHAYGESTGTTGQPIGIDAVGPSSDTFALVTSEGIFVHQGTACAAHLENLGYEALCVAMNGAGDTVAVGAKNMNIYIYSFDGSSLTQTNMVSGHRGEVSSLAFSPCGGFLAAGDSYKEVRVHKTEDWSIKIQGRWVFHTSRVTCLSWSPNGINLASGSNDTKVIIWNLKKTLKKKELNYVHMGGVNDVAYLDENTLVTVGNDQCVCTWNLAEE 619          
BLAST of mRNA_C-australica_Contig_981.3.5 vs. uniprot
Match: A0A5D6Y7H0_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6Y7H0_9STRA)

HSP 1 Score: 351 bits (901), Expect = 1.720e-109
Identity = 288/615 (46.83%), Postives = 367/615 (59.67%), Query Frame = 1
Query:   34 PSFKGHCVPNPSTERGNNVHIGAHPKDPILLYPSGKYIIARNLEDPSQSFVYRGHNAVTTVAKFSPNGFWVASADATGKVRVWAWDNPEHNLKIEIFGIGGAIKDLXXXXXXXXXXXXXXXXXXXXXXXXXXTGSALGEVVGHNKRVVSCDYRSERPFKIMTGSEDMRTIFFKGPPFSLDHSNKDQHSNFINCVRFSPDCSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCKLWDVTSAPGYLITTWTLGA---EVADMQCGVVWMRGQILSLSLSGDLNELKEG-AAEPVKVIQAHQVAVTAMCPTPTASGEFITGSFDGVVCRXXXXXXXXXXXXXXXXXXXXXAAHSNKVTSIGLAKDGIVSVGWDDSLRVASLSTGAYTAVVPLEGQPCSVSCSPS-SDLAAVATTKGV-VLSRGATIVKTLETTYTPASVAL--LGEEEVAVGADDNKIYIYAL--SGADLTQTQVIEGHRGKVTALAYSPDQLYLAAGDAAKEVNVWTRGSWDAKVQGLWQFHXXXXXXXXXXXXXXXXXXXXXXXXXXXXSLAKTRRRINYPFSHKEGVVGLAWSNPGELVSAGADHCIAKWDI 1848
            P  +    PNP+T RG    +G HPK+P ++Y SGK ++ RNLEDPS +FVY+GHN  TTVAKFSP+G+WVAS D +GKVRVW++DNPEH LKIE+    G IKD+                          TG++LGE+VGH KR++S DY+  RPF+IMT SED     ++GPPF    +N   H+NF+NCVR+SPD +          XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX       +    ++T +T G    +V DMQ  V W R  ++SLSLSGDLN L     A P +V+QAHQ ++ A+  T  A    +TGS+DGVVC                      +AHS K+T I      + SVGWDD +R A     AY+A  PL  QP  V+     S LA V++ KGV +L  G  + +T E  +TP  VAL   G+     GA+D KI+++ +  SG  L +   I GH G +T++A+SPD   LAAGDA +EV VW   S            XXXXXXXXXXXXXXXXXXXXXXXXXXXX  A    + ++ F+HK+G  G+ +    +LVS G D C+  W +
Sbjct:   14 PQLQATLPPNPTTTRGAPSVLGVHPKEPKIIYCSGKLVVVRNLEDPSDTFVYKGHNEQTTVAKFSPSGYWVASGDVSGKVRVWSYDNPEHTLKIEVPVFAGEIKDIAWDPESKRIVAVGDGRALMARVFMWDTGNSLGEIVGHQKRILSVDYKPTRPFRIMTASEDFNVCVYEGPPFKFKQNNSGLHANFVNCVRYSPDGAFAVSVGSDKLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTRA--VVTKFTFGGAAPQVKDMQVAVAWCRDHLVSLSLSGDLNLLDVAHPATPKRVVQAHQGSILALA-TDAARSRVLTGSYDGVVCAWEAKTATVLGG----------SAHSGKITGIAANARQVASVGWDDHIRFADAEAAAYSASAPLNAQPTGVALGEGDSPLAVVSSNKGVKLLVDGRVVFETPEFAWTPTCVALSPAGDMVAVGGAEDMKIHLFDVVDSGRALVEAGEIVGHLGALTSVAFSPDGARLAAGDAYREVRVWDVASRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXANPMSKRSFEFAHKDGATGVRFVAEDQLVSVGNDACVNFWQL 615          
BLAST of mRNA_C-australica_Contig_981.3.5 vs. uniprot
Match: A0A482T5Y6_9ARCH (WD40 repeat domain-containing protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482T5Y6_9ARCH)

HSP 1 Score: 349 bits (896), Expect = 3.650e-109
Identity = 213/583 (36.54%), Postives = 295/583 (50.60%), Query Frame = 1
Query:  121 LLYPSGKYIIARNLEDPSQSFVYRGHNAVTTVAKFSPNGFWVASADATGKVRVWAWDNPEHNLKIEIFGIGGAIKDLXXXXXXXXXXXXXXXXXXXXXXXXXXTGSALGEVVGHNKRVVSCDYRSERPFKIMTGSEDMRTIFFKGPPFSLDHSNKDQHSNFINCVRFSPDCSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCKLWDVTSAPGYLITTWTLGAEVADMQCGVVWMRGQILSLSLSGDLNELKEGAAEPVKVIQAHQVAVTAMCPTPTASGEFITGSFDGVVC----RXXXXXXXXXXXXXXXXXXXXXAAHSNKVTSIGLAKDGIVSVGWDDSLRVASLSTGAYTAVVPLEGQPCSVSCSPSSDLAAVATTKGVVLSRGATIVKTLETT---YTPASVALLGEEEVAVGADDNKIYIYALSGADLTQTQVIEGHRGKVTALAYSPDQLYLAAGDAAKEVNVWTRGSWDAKVQGLWQFHXXXXXXXXXXXXXXXXXXXXXXXXXXXXSLAKTRRRINYPFSHKEGVVGLAWSNPGELVSAGADHCIAKWDI 1848
            ++Y SG++I+ +N  +PS+ FVYRGH    TVAKFSPNG+WVASAD +GKVRVW+WDNPEH LK+E+    G + DL                          TG+++GE+VGH  RV+S  Y+  RPF+IMTG ED    F+ GPPF LD S+   H+NF+NCVR++P+ S                                                      K+W+  +         +   ++ D Q  VVW R  + S++L+GD+ +      E  +VIQ+HQ+ +TA+     AS    +GS DGVVC                            H  K+  + +  D +VS GWDD LR+AS +T  Y +   L GQP  ++ S +SDL  V TT  V L RG T   TL  +   +TP   ALLGEEEVA+G  DNK  IY+++G+   +  ++E  R  V+ ++YSP    LA GDA ++V V+ RGSW AKV+GLW FH        XXXXXXXXXX          ++  T  +    FSH  GV GL W+   +L+S G D  +A W++
Sbjct:    1 MIYASGRFIVVKNYNNPSECFVYRGHALQATVAKFSPNGYWVASADVSGKVRVWSWDNPEHLLKVEVPVFAGPVADLDWDNESKKIVAVGDGATSVAKVFQWDTGNSVGEIVGHRGRVLSVAYKPSRPFRIMTGGEDFMCCFYSGPPFKLDQSSN-MHTNFVNCVRYAPNGSKIVSVGTDKKVQVYDGTSGAPVHDIVNAHDGGIYGIAFHPSSTHFATSSADKTIKIWNAETYVCEQTIAVSADPQIRDAQLAVVWTRDGLFSVALNGDIVKFSTTGVE--RVIQSHQLGLTAL-HVDRASQTVYSGSADGVVCVRGLESGPTYLDAAKLIGQDKKHLPAGGHGGKIVGVVVDGDNVVSAGWDDKLRIASATTKQYHSEAALNGQPSWLAKSATSDLVVVVTTAEVALFRGTTKTATLVVSTFPWTPTCAALLGEEEVAIGGTDNKTRIYSIAGSTFVERHIVET-RSAVSVVSYSPGGTLLAIGDAGRQVEVYERGSWVAKVKGLWVFHTSKITALAXXXXXXXXXXGSLDENIFIWNINNTSVKTQIAFSHTGGVSGLDWTADNKLISVGNDGVLASWNV 578          
BLAST of mRNA_C-australica_Contig_981.3.5 vs. uniprot
Match: W4FQG2_9STRA (Uncharacterized protein n=7 Tax=Aphanomyces astaci TaxID=112090 RepID=W4FQG2_9STRA)

HSP 1 Score: 338 bits (868), Expect = 1.580e-104
Identity = 247/625 (39.52%), Postives = 336/625 (53.76%), Query Frame = 1
Query:   25 LNHPSFKGHCVPNPSTERGNNVHIGAHPKDPILLYPSGKYIIARNLEDPSQSFVYRGHNAVTTVAKFSPNGFWVASADATGKVRVWAWDNPEHNLKIEIFGIGGAIKDLXXXXXXXXXXXXXXXXXXXXXXXXXXTGSALGEVVGHNKRVVSCDYRSERPFKIMTGSEDMRTIFFKGPPFSLDHSNKDQHSNFINCVRFSPDCSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCKLWDVTSAPGYLITTWTLGA-EVADMQCGVVWMRGQILSLSLSGDLNELKEGAAE-PVKVIQAHQVAVTAMCPTPTASGEFITGSFDGVVCRXXXXXXXXXXXXXXXXXXXXXAAHSNKVTSIGLAKDGIVSVGWDDSLRVASLSTGAYTAVVPLEG-QPCSVSCS---PSSD-LAAVATTKGV-VLSRGATIVKTLETT-YTPASVALLGE-EEVAVGAD-DNKIYIYALSGADLTQTQVIE------GHRGKVTALAYSPDQLYLAAGDAAKEVNVWTRGSWDAKVQGLWQFHXXXXXXXXXXXXXXXXXXXXXXXXXXXXSLAKTRRRINYPFSHKEGVVGLAWSNPGELVSAGADHCIAKWDI 1848
            L  P+ K    P+P+T RG+   +G HPK+P ++Y +GK ++ R+L +P + F+Y+GHN  TTVAKFSPNG+WVASAD  G+VRVW++DNPEH LK+E+    G +KDL                          TG+++GE+VGH KR++S DY+  RPF+I+T SED     F+GPPF   HS    HSNF NCVR+SPD                                                        KLWDV S    ++TT+T G+  + DMQ  VVW+   ++SLSLSGDLN L     + P++V+Q HQV++ A+    T +G  +TGS+DG V                       AAH+ KVTSI + +  + S GWDD +R  SL   +Y+  V L G QP  V+ +   PS   L  VAT KGV +L  GA   +T  T  +TP SVA+    E+VAVG D D +++++ + G    +  ++E       H G VT+L YSPD   LAAGDAA+EV VW       +V G W  H  XXXXXXXXXXXXXXXXXXXXXXXXXX   +   R  +  +H++GV+ + +    +LVS G D  +  W +
Sbjct:   10 LPDPNLKVTFSPHPTTSRGSPTVLGVHPKEPKIVYCTGKLVVVRDLVNPVECFLYKGHNDATTVAKFSPNGYWVASADIAGRVRVWSYDNPEHTLKVEVPVFAGEVKDLQWDPDSKRIVAVGDGRTVSSRVFMWDTGNSIGEIVGHTKRIMSVDYKPTRPFRILTASEDSTVRAFEGPPFKFKHSIP-AHSNFANCVRYSPDGVHAVSVGSDKGMVLYDAKTSEKLASFPVEHTVSIYSVAWSPDSKQLLTASGDKTVKLWDVASLS--VVTTFTFGSGAIEDMQVSVVWVGDFLVSLSLSGDLNYLDLSHPDKPLRVVQGHQVSLQALA-VDTDTGALVTGSYDGAVVSWHASIGRRFTG----------AAHTAKVTSIDVHRGIVASGGWDDVVRFGSLVDASYSGSVGLNGAQPSDVALATHAPSGTVLCVVATNKGVKLLVNGALAFETSATAAWTPTSVAITSSGEQVAVGGDEDRRVHLFDVVGNG-DEWSLVERDGAAFAHNGSVTSLEYSPDGTLLAAGDAAREVRVWDVAQGIPRVGGQWVHHTTXXXXXXXXXXXXXXXXXXXXXXXXXXXXQQPSNRHKFENAHRDGVMAVKFVADDQLVSVGNDAAVHTWQV 619          
BLAST of mRNA_C-australica_Contig_981.3.5 vs. uniprot
Match: A0A6G0WHC6_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WHC6_9STRA)

HSP 1 Score: 335 bits (860), Expect = 2.290e-103
Identity = 250/616 (40.58%), Postives = 341/616 (55.36%), Query Frame = 1
Query:   34 PSFKGHCVPNPSTERGNNVHIGAHPKDPILLYPSGKYIIARNLEDPSQSFVYRGHNAVTTVAKFSPNGFWVASADATGKVRVWAWDNPEHNLKIEIFGIGGAIKDLXXXXXXXXXXXXXXXXXXXXXXXXXXTGSALGEVVGHNKRVVSCDYRSERPFKIMTGSEDMRTIFFKGPPFSLDHSNKDQHSNFINCVRFSPDCSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCKLWDVTSAPGYLITTWTLGAEVADMQCGVVWMRGQILSLSLSGDLNELK-EGAAEPVKVIQAHQVAVTAMCPTPTASGEFITGSFDGVVCRXXXXXXXXXXXXXXXXXXXXXAAHSNKVTSIGLAKDGIVSVGWDDSLRVASLSTGAYTAVVPLEG-QPCSVSCSPSSD----LAAVATTKGV-VLSRGATIVKTLETTYTPASVALLGE-EEVAVGADDNK-IYIYAL----SGADLTQTQVIEGHRGKVTALAYSPDQLYLAAGDAAKEVNVWTRGSWDAKVQGLWQFHXXXXXXXXXXXXXXXXXXXXXXXXXXXXSLAKTRRRINYPFSHKEGVVGLAWSNPGELVSAGADHCIAKW 1842
            P+ K    P+P+T RG+   +  HPK+P ++Y +GK +I R+L +P   F+YRGHN  TTVAKFSP+G+WVASAD +GK+RVW+WDNPEH LK+EI    G +KDL                          TG+++G++VGH+KR++SCDY+  RPF+I+T SED     ++GPPF   HS    H++F NCVR+SPD                                         XXXXXXXXXXXXXX                 T G+ V+DMQCGVVW+   ++SLSLSGDLN L     ++P++V+Q HQV++ A+   P  +   +TGS+DG V                       A H+ KVTSI + K  + S GWDD +R  SL+   Y+  V L G QP  V+ +  S     L AV T KGV +++ G    ++    +TP SVA+      VAVG D+++ I+I+ +    SG  L +T    GH G +T L++SPD   LAAGD+ +EV +W   +  A+V G W   XXXXXXXXXXXXXXXXXXXXXXXXXXXX   K   R  + ++HK+GV+G+ +     L+S G D  +  W
Sbjct:   14 PNLKSTFSPHPTTSRGSPTVLSVHPKEPKIIYCTGKLVIVRDLANPVDCFIYRGHNDTTTVAKFSPSGYWVASADVSGKIRVWSWDNPEHTLKVEIPVFAGEVKDLSWDPESKRIVAVGDGRNLLARVFMWDTGNSIGDIVGHSKRIMSCDYKPNRPFRILTASEDALVCAYEGPPFKFKHSIP-AHTSFANCVRYSPD--GVHAVSVGSDKGMVLYDAKTSEKIAVFPVEHAVSIYSVAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTFGSAVSDMQCGVVWVGDFLVSLSLSGDLNYLDINNPSKPLRVLQGHQVSLQAIAVDPETA-TIVTGSYDGAVVAWKGSNGHRLDG----------AVHTAKVTSIDVHKGLVASGGWDDVVRFGSLAEATYSGSVGLNGAQPSDVALATHSASGTILCAVGTNKGVKLIADGQLAFESPNFAWTPTSVAISPSGTTVAVGGDEDRLIHIFQVVQNGSGFTLEETATYAGHSGALTCLSFSPDGTLLAAGDSGREVRIWDVATGTARVAGQWVHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKPANRFKFEYTHKDGVMGVKFMADDHLISVGNDSSVHTW 615          
The following BLAST results are available for this feature:
BLAST of mRNA_C-australica_Contig_981.3.5 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LFK5_ECTSI9.950e-18351.64WD66_PHYPO66 kDa stress protein (P66) n=2 Tax=Ecto... [more]
A0A836C9B9_9STRA2.550e-17645.8566 kDa stress protein n=1 Tax=Tribonema minus TaxI... [more]
M4B2S9_HYAAE1.350e-11246.25Uncharacterized protein n=27 Tax=Peronosporaceae T... [more]
A0A485KKR6_9STRA1.520e-11139.59Aste57867_8573 protein n=1 Tax=Aphanomyces stellat... [more]
A0A0P1A7D1_PLAHL1.800e-11146.17WD40 repeat stress protein/actin interacting prote... [more]
A0A7S1U9R9_9STRA3.390e-11033.83Hypothetical protein n=2 Tax=Phaeomonas parva TaxI... [more]
A0A5D6Y7H0_9STRA1.720e-10946.83Uncharacterized protein n=1 Tax=Pythium brassicum ... [more]
A0A482T5Y6_9ARCH3.650e-10936.54WD40 repeat domain-containing protein n=1 Tax=arch... [more]
W4FQG2_9STRA1.580e-10439.52Uncharacterized protein n=7 Tax=Aphanomyces astaci... [more]
A0A6G0WHC6_9STRA2.290e-10340.58Uncharacterized protein n=1 Tax=Aphanomyces euteic... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-australica_Contig_981contigC-australica_Contig_981:11194..15355 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Chrysoparadoxa australica CS_1217 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D8LFK5
Preferred nameAIP1
PFAMsWD40
Model size1881
Max annot lvl2759|Eukaryota
Hectar predicted targeting categoryother localisation
Exons16
Evalue1.63e-183
EggNOG OGsKOG0318@1|root,KOG0318@2759|Eukaryota
Ec32 ortholog descriptionWD40 repeat
Ec32 orthologEc-04_001870.1
Descriptionpositive regulation of actin filament depolymerization
Cds size1881
COG categoryS
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_C-australica_Contig_981.3.5prot_C-australica_Contig_981.3.5Chrysoparadoxa australica CS_1217polypeptideC-australica_Contig_981 11194..15355 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1682588848.7249343-CDS-C-australica_Contig_981:11193..112761682588848.7249343-CDS-C-australica_Contig_981:11193..11276Chrysoparadoxa australica CS_1217CDSC-australica_Contig_981 11194..11276 -
1682588848.7340152-CDS-C-australica_Contig_981:11430..115001682588848.7340152-CDS-C-australica_Contig_981:11430..11500Chrysoparadoxa australica CS_1217CDSC-australica_Contig_981 11431..11500 -
1682588848.7415752-CDS-C-australica_Contig_981:11595..116821682588848.7415752-CDS-C-australica_Contig_981:11595..11682Chrysoparadoxa australica CS_1217CDSC-australica_Contig_981 11596..11682 -
1682588848.7513666-CDS-C-australica_Contig_981:11809..118781682588848.7513666-CDS-C-australica_Contig_981:11809..11878Chrysoparadoxa australica CS_1217CDSC-australica_Contig_981 11810..11878 -
1682588848.759061-CDS-C-australica_Contig_981:11952..120391682588848.759061-CDS-C-australica_Contig_981:11952..12039Chrysoparadoxa australica CS_1217CDSC-australica_Contig_981 11953..12039 -
1682588848.7671447-CDS-C-australica_Contig_981:12238..123831682588848.7671447-CDS-C-australica_Contig_981:12238..12383Chrysoparadoxa australica CS_1217CDSC-australica_Contig_981 12239..12383 -
1682588848.775101-CDS-C-australica_Contig_981:12641..128321682588848.775101-CDS-C-australica_Contig_981:12641..12832Chrysoparadoxa australica CS_1217CDSC-australica_Contig_981 12642..12832 -
1682588848.782706-CDS-C-australica_Contig_981:13029..130681682588848.782706-CDS-C-australica_Contig_981:13029..13068Chrysoparadoxa australica CS_1217CDSC-australica_Contig_981 13030..13068 -
1682588848.7915902-CDS-C-australica_Contig_981:13247..133701682588848.7915902-CDS-C-australica_Contig_981:13247..13370Chrysoparadoxa australica CS_1217CDSC-australica_Contig_981 13248..13370 -
1682588848.8012795-CDS-C-australica_Contig_981:13446..137421682588848.8012795-CDS-C-australica_Contig_981:13446..13742Chrysoparadoxa australica CS_1217CDSC-australica_Contig_981 13447..13742 -
1682588848.8089104-CDS-C-australica_Contig_981:13814..139951682588848.8089104-CDS-C-australica_Contig_981:13814..13995Chrysoparadoxa australica CS_1217CDSC-australica_Contig_981 13815..13995 -
1682588848.81659-CDS-C-australica_Contig_981:14124..143691682588848.81659-CDS-C-australica_Contig_981:14124..14369Chrysoparadoxa australica CS_1217CDSC-australica_Contig_981 14125..14369 -
1682588848.824394-CDS-C-australica_Contig_981:14685..147361682588848.824394-CDS-C-australica_Contig_981:14685..14736Chrysoparadoxa australica CS_1217CDSC-australica_Contig_981 14686..14736 -
1682588848.832146-CDS-C-australica_Contig_981:14834..149141682588848.832146-CDS-C-australica_Contig_981:14834..14914Chrysoparadoxa australica CS_1217CDSC-australica_Contig_981 14835..14914 -
1682588848.839757-CDS-C-australica_Contig_981:15013..151021682588848.839757-CDS-C-australica_Contig_981:15013..15102Chrysoparadoxa australica CS_1217CDSC-australica_Contig_981 15014..15102 -
1682588848.8473551-CDS-C-australica_Contig_981:15310..153551682588848.8473551-CDS-C-australica_Contig_981:15310..15355Chrysoparadoxa australica CS_1217CDSC-australica_Contig_981 15311..15355 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_C-australica_Contig_981.3.5

>prot_C-australica_Contig_981.3.5 ID=prot_C-australica_Contig_981.3.5|Name=mRNA_C-australica_Contig_981.3.5|organism=Chrysoparadoxa australica CS_1217|type=polypeptide|length=627bp
MAKTAAACLNHPSFKGHCVPNPSTERGNNVHIGAHPKDPILLYPSGKYII
ARNLEDPSQSFVYRGHNAVTTVAKFSPNGFWVASADATGKVRVWAWDNPE
HNLKIEIFGIGGAIKDLAWDGESKRIVVVGDGTSQNMRAFAWDTGSALGE
VVGHNKRVVSCDYRSERPFKIMTGSEDMRTIFFKGPPFSLDHSNKDQHSN
FINCVRFSPDCSKVVTVGSDKKIWIYDGKTGEPMHSLPESHTGGIYSVAW
SADSHKIVTASADKTCKLWDVTSAPGYLITTWTLGAEVADMQCGVVWMRG
QILSLSLSGDLNELKEGAAEPVKVIQAHQVAVTAMCPTPTASGEFITGSF
DGVVCRCDAGTGTTKRITGQVDGSICRAAHSNKVTSIGLAKDGIVSVGWD
DSLRVASLSTGAYTAVVPLEGQPCSVSCSPSSDLAAVATTKGVVLSRGAT
IVKTLETTYTPASVALLGEEEVAVGADDNKIYIYALSGADLTQTQVIEGH
RGKVTALAYSPDQLYLAAGDAAKEVNVWTRGSWDAKVQGLWQFHTTQITC
IAWCPDSQLVATGAMDENIYIWSLAKTRRRINYPFSHKEGVVGLAWSNPG
ELVSAGADHCIAKWDILEDRTVFTKK*
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mRNA from alignment at C-australica_Contig_981:11194..15355-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_C-australica_Contig_981.3.5 ID=mRNA_C-australica_Contig_981.3.5|Name=mRNA_C-australica_Contig_981.3.5|organism=Chrysoparadoxa australica CS_1217|type=mRNA|length=4162bp|location=Sequence derived from alignment at C-australica_Contig_981:11194..15355- (Chrysoparadoxa australica CS_1217)
ATGGCTAAGACAGCAGCAGCATGCTTAAATCACCCCTCTTTCAAGGTAGG CTTCTCTAGCTGGAAAAAAAGGGCCAGTAGGCTGTCTCTCTCCACATCAA CCAAGCCTCCCCTCCCGCCTCGGCTGCTCTTGAGAGCTTTGAGGGCCGCA AGTTATCTGATGCATACAGAGCTGTAGTCCCATCGAAGCGGGTGCAACCA AATAAACCGTCTTACTTGTCCCTCAACCCTTCTCACCCTTCTCTCCTGTG CAGGGTCATTGTGTACCAAACCCCAGCACAGAGAGGGGCAATAACGTCCA CATTGGGGCACACCCCAAGGACCCAATTCTTCTGTACCCAAGGTCAGTTC TTGCTACAGCGACCTGTCTGTTTTCTTGACCCGATTGCTCACCCCTCATA TTGCTTGCGCTTGCTAATTGACCCCACTGTGACCCCCTCAGTGGCAAATA CATCATTGCAAGGAACCTAGAAGACCCAAGCCAATCCTTTGTCTACCGCG GCCACAATGCTGTCACCACTGGTAGGCGGCCTGCTTCCTTCTCTTTTTTC CACCTATATATATATATATATATATATGCCTAACCTTCTTCCAAACTGGA ACCCTTTTGTCTGAAAAAGTGGCCAAGTTTTCACCCAATGGCTTCTGGGT GGCATCAGCAGACGCAACAGGTAAGACTGCCCGAAGTAGGCCCTGCAGAT TAATCTCAGCCCAGCTGCTTGCACAGTAAAAACCCCATCCATTCGTGCAT CCCCGTCATTTGCCTGCCTACTAGAAATAGTTTACGACCAGCTTTGGTGT ACCTGATCACTCGTTCAGATCCCTTAGCCCCTTAGCCTTGCCATCATGGC GGTCATTCCCTTGCCCCCACCGCGTCCGAATCACCTGTCTCTTCAATGAA AGCACCTACCTCTTTCACCGCTCACTATAATATAACTATATTTCTGCTTT GTTCCCATTTGGTCACATGCCTCCTTGCCACCACAGGCAAAGTCCGTGTA TGGGCATGGGACAACCCTGAGCACAACCTCAAGATTGAGATCTTTGGCAT CGGTGGTGCCATCAAGGACCTGGCCTGGGATGGAGAGAGCAAGCGCATTG TAGTTGTGGGTGATGGCACCAGTCAGAACATGCGTGCTTTTGCCTGGGAC ACTGGCAGCGCACTTGGTGAAGTGGTCGGGCACAACAAGCGGGTGGTCTC ATGTGACTACCGCAGTGAAAGGCCATTCAAGGTGATTAGCTTGCTCCTGC TCATTCATTCACTCACTCACTCACTCTTGTAATTGATAAAGCCAGCACTG TGGGCCTTGCTACCCACTTCCCTACCTTGCCTCTCATGAATTTGCCCCTT GCCATACCAGATCATGACCGGAAGTGAAGACATGCGCACCATCTTCTTCA AGGGCCCACCATTCTCACTAGATCACAGCAACAAGGACCAGCACTCTAAC TTCATCAATTGCGTGCGGTTCAGCCCGGACTGCAGCAAGGTGGTCACCGT GGGCTCTGACAAGAAGATCTGGATTTATGATGGAAAGACAGGTGGGCGGG TGGTTGTTTTATCATTCATTGTATTGCTCATTCAACTTACTCCTTCCTTC CTCTACCCTGCAGGCGAGCCCATGCACTCCTTGCCTGAGTCACACACTGG AGGTATCTACAGTGTGGCATGGTCAGCTGACAGCCACAAGATTGTCACTG CTTCAGCTGATAAGACCTGCAAGCTGTGGGATGTCACATCAGCTCCTGGG TACCTCATCACCACTTGGACGCTTGGCGCAGAAGTTGCTGACATGCAGTG CGGCGTGGTATGGATGAGAGGACAGATACTGTCACTCAGCCTCTCAGGTG ATCTCAACGAGTTGAAGGAAGGTGCAGCAGAGCCGGTGAAGGTCATCCAG GCCCATCAGGTGGATAAGATAACCCTTTTACTTAGCTCTCCATCATCAAC ACTGCCCTGACCTTTCTCATCCATCCATCTGCCAGGTTGCAGTGACTGCC ATGTGCCCCACCCCTACTGCCTCCGGTGAGTTCATCACCGGCTCCTTCGA CGGTGTTGTATGCAGGTGTGATGCTGGTACTGGGACAACCAAGCGCATCA CTGGGCAGGCATGTGACTTTGACATTCCTCAGCACTCACTCATCCCATGC CTACCCTGCTGTAACAGCCCAACCCACCCCTGATACTCGGCAATACACTA CATGATAGATATACTGATAGTTGGTAGCAACGGGAAAACCAGCCAACCAA GCTCTCTCACTTCTCCACATGATTGTTCCCTTGGCAGGTGGATGGAAGCA TTTGCCGGGCAGCTCACAGCAACAAAGTGCGTGCAAACTGACCACTAGCT GACTTACTTGACCACGAGACAAGACTGATTCACATCAGCTGTGACCAACT TGCCAACTTGCCTCTTATCTCAGTCTAATCCAAACACCGCTGTGCTGTTT TCCTCTCTGCTCATAACGTTTCAGCTTCCCTCTTTGACCCTTGGGCACTC ATTTTTCCTAGTACCTCTCCTAGGTAACCAGCATAGGCCTTGCCAAAGAC GGCATTGTCAGTGTCGGCTGGGATGACTCGCTACGTGTTGCCTCACTCTC CACTGGTGCTTACACAGCTGTAGTGCCTCTGGAGGGGCAGCCATGCTCTG TGTCATGCTCTCCTTCCTCCGACCTTGCTGCTGTAGCCACCACCAAGGGA GTGGTCCTCTCAAGGTTGGATAGAGAGAATCTGTTAAGAAGTCATGTAAC AGGATAAGGATAGGGAGGAGGTCGCTCAGGAAGTGGTAGCCTAGCAAATG CAGTGAGCTCGAGTACCAGATTTGAAGGATGTGTAGGTAGTGATTGGCCA GTTTCATCTCAGCTTTCACACATTTGGTTGCTCAAAGACCCTAGGCACTT GCTTGCATCGGTGGCAACTGAAAGGGAAGCTATTTAACGCGATTGCCACC TTGGACCACCTGAACTACACAGGGGTGCCACCATTGTCAAGACTCTGGAG ACAACATACACCCCAGCCTCTGTTGCCCTTTTGGGCGAAGAAGAAGTCGC TGTCGGAGCTGATGACAACAAGATTTACATTTACGCACTTTCTGGCGCAG ACCTTACCCAAACCCAGGTCCACATCACCGTCTCTCCCTCACATGACACA TGACACATGACAACCCCCTCTTGCTTCCTGATATTCTGCCACTTTGAGGC TTTCACGTTCGGCCGATCATTGGTTCAAACTGCTCCACTGCCTCAGTCCA GCCCAACTAGCCATTGTAATCACTTGCTGTTTGTCGTTGGTCCTTTTTAT TGCGTTGTACCCACAGGTCATTGAAGGACACCGTGGCAAGGTGACTGCTT TGGCTTACTCTCCTGACCAGCTTTACCTGGCAGCTGGAGATGCAGCGAAG GAGGTGATAGTGACAAATTTAACCCAAACCTTACTTGCTTTGACCTGACC CGACCTGACCTATCTTGACCTTCCTAGGTCAACGTATGGACACGTGGCAG CTGGGATGCTAAGGTGCAGGGCTTGTGGCAGTTTCACACCACGCAGGTGA CAGACACACTGATGCCATTCATAGCCGTTGATAGCCATCGGTAGCCATTG ATAGCCCAGCTATACCAAATTGCTTCTGATGCATTATACTGTCCTAAGCC ATTTTATTTTTCTCAATCCACAGATCACATGCATTGCTTGGTGCCCTGAC AGCCAGCTGGTTGCAACTGGGGCCATGGATGAGAACATTTACATCTGGAG TCTTGCTAAGGTAGGCTAACCATGCAGCACGCAGAGTGCTTACATTTTGC CATTACGCTATCTCATTTGACCTCACCTCACCTCCTATTGCTCTCTCCCA TCCAGACGCGCCGGCGCATCAACTACCCCTTTTCTCACAAGGAGGGGGTG GTGGGACTGGCATGGTCTAATCCAGGTAATGCAAAAAAGGCTAGCAGTAC ATTGCGAGGCTCAAGTTTATCATAATACATAAGGGCATTACTGGTCACTC TTTCTACCCCGCTCCCACAGTGCCATTACAAGCAAGTAATCCGGCCTTGC CAATGCGCCATTTGCCTTTACTCCCGCAGGTGAGCTTGTGTCAGCAGGGG CAGACCACTGTATTGCCAAATGGGACATCCTGGAGGATAGGACGGTGTTT ACGAAGAAGTAA
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Coding sequence (CDS) from alignment at C-australica_Contig_981:11194..15355-

>mRNA_C-australica_Contig_981.3.5 ID=mRNA_C-australica_Contig_981.3.5|Name=mRNA_C-australica_Contig_981.3.5|organism=Chrysoparadoxa australica CS_1217|type=CDS|length=1881bp|location=Sequence derived from alignment at C-australica_Contig_981:11194..15355- (Chrysoparadoxa australica CS_1217)
ATGGCTAAGACAGCAGCAGCATGCTTAAATCACCCCTCTTTCAAGGGTCA
TTGTGTACCAAACCCCAGCACAGAGAGGGGCAATAACGTCCACATTGGGG
CACACCCCAAGGACCCAATTCTTCTGTACCCAAGTGGCAAATACATCATT
GCAAGGAACCTAGAAGACCCAAGCCAATCCTTTGTCTACCGCGGCCACAA
TGCTGTCACCACTGTGGCCAAGTTTTCACCCAATGGCTTCTGGGTGGCAT
CAGCAGACGCAACAGGCAAAGTCCGTGTATGGGCATGGGACAACCCTGAG
CACAACCTCAAGATTGAGATCTTTGGCATCGGTGGTGCCATCAAGGACCT
GGCCTGGGATGGAGAGAGCAAGCGCATTGTAGTTGTGGGTGATGGCACCA
GTCAGAACATGCGTGCTTTTGCCTGGGACACTGGCAGCGCACTTGGTGAA
GTGGTCGGGCACAACAAGCGGGTGGTCTCATGTGACTACCGCAGTGAAAG
GCCATTCAAGATCATGACCGGAAGTGAAGACATGCGCACCATCTTCTTCA
AGGGCCCACCATTCTCACTAGATCACAGCAACAAGGACCAGCACTCTAAC
TTCATCAATTGCGTGCGGTTCAGCCCGGACTGCAGCAAGGTGGTCACCGT
GGGCTCTGACAAGAAGATCTGGATTTATGATGGAAAGACAGGCGAGCCCA
TGCACTCCTTGCCTGAGTCACACACTGGAGGTATCTACAGTGTGGCATGG
TCAGCTGACAGCCACAAGATTGTCACTGCTTCAGCTGATAAGACCTGCAA
GCTGTGGGATGTCACATCAGCTCCTGGGTACCTCATCACCACTTGGACGC
TTGGCGCAGAAGTTGCTGACATGCAGTGCGGCGTGGTATGGATGAGAGGA
CAGATACTGTCACTCAGCCTCTCAGGTGATCTCAACGAGTTGAAGGAAGG
TGCAGCAGAGCCGGTGAAGGTCATCCAGGCCCATCAGGTTGCAGTGACTG
CCATGTGCCCCACCCCTACTGCCTCCGGTGAGTTCATCACCGGCTCCTTC
GACGGTGTTGTATGCAGGTGTGATGCTGGTACTGGGACAACCAAGCGCAT
CACTGGGCAGGTGGATGGAAGCATTTGCCGGGCAGCTCACAGCAACAAAG
TAACCAGCATAGGCCTTGCCAAAGACGGCATTGTCAGTGTCGGCTGGGAT
GACTCGCTACGTGTTGCCTCACTCTCCACTGGTGCTTACACAGCTGTAGT
GCCTCTGGAGGGGCAGCCATGCTCTGTGTCATGCTCTCCTTCCTCCGACC
TTGCTGCTGTAGCCACCACCAAGGGAGTGGTCCTCTCAAGGGGTGCCACC
ATTGTCAAGACTCTGGAGACAACATACACCCCAGCCTCTGTTGCCCTTTT
GGGCGAAGAAGAAGTCGCTGTCGGAGCTGATGACAACAAGATTTACATTT
ACGCACTTTCTGGCGCAGACCTTACCCAAACCCAGGTCATTGAAGGACAC
CGTGGCAAGGTGACTGCTTTGGCTTACTCTCCTGACCAGCTTTACCTGGC
AGCTGGAGATGCAGCGAAGGAGGTCAACGTATGGACACGTGGCAGCTGGG
ATGCTAAGGTGCAGGGCTTGTGGCAGTTTCACACCACGCAGATCACATGC
ATTGCTTGGTGCCCTGACAGCCAGCTGGTTGCAACTGGGGCCATGGATGA
GAACATTTACATCTGGAGTCTTGCTAAGACGCGCCGGCGCATCAACTACC
CCTTTTCTCACAAGGAGGGGGTGGTGGGACTGGCATGGTCTAATCCAGGT
GAGCTTGTGTCAGCAGGGGCAGACCACTGTATTGCCAAATGGGACATCCT
GGAGGATAGGACGGTGTTTACGAAGAAGTAA
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