mRNA_C-australica_Contig_9809.1.1 (mRNA) Chrysoparadoxa australica CS_1217

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_C-australica_Contig_9809.1.1
Unique NamemRNA_C-australica_Contig_9809.1.1
TypemRNA
OrganismChrysoparadoxa australica CS_1217 (Chrysoparadoxa australica CS_1217)
Homology
BLAST of mRNA_C-australica_Contig_9809.1.1 vs. uniprot
Match: A0A3B9H5P9_9FLAO (CusA/CzcA family heavy metal efflux RND transporter (Fragment) n=2 Tax=Flavobacteriales TaxID=200644 RepID=A0A3B9H5P9_9FLAO)

HSP 1 Score: 468 bits (1203), Expect = 7.270e-161
Identity = 245/285 (85.96%), Postives = 264/285 (92.63%), Query Frame = 1
Query:    1 DIENIVITNLGGLPITIKDVASVQFGHAVRYGAFTMDGKGEAVGGMILMLKGANSNNVINEVKNRVEEIQKSLPEGVHIEPFLDRSALIAKTTNTVSQNLLEGALIVIFVLVFLLGNWRGGLIVATTIPLSLLFAFILMNLFDVWANLMSLGAIDFGIIVDGAVIIVEGTVFLLHDKILKKQNITADVRNEVAYSASSKMMNAAFFGQLIILIVFIPILALQGVEGKMFQPMALTFMFAMIGVMILCLTYVPMMSAWFIRTNTKNKLSWGDRFVLRIEKIYEPIL 855
            DIENIV+ N+ GLPITIKDVA VQFG AVRYGA T DG+GE VGG+++MLKGANSN+VI  VK R+ EIQKSLPEGV IEP LDRS LIAKTT TVSQNL+EGALIVIFVLVFLLGNWRGGLIVA+TIPLSLLFAFILMN+FDVWANLMSLGAIDFGIIVDGAVIIVEGTVFLLHDK+LKKQNITA VRN+VAYSASSKMMN+AFFGQLII IVFIPILAL+GVEGKMF+PMALTFMFAMIGVMILCLTYVPMMSAWFIRT TKNK SWGD+FV+ +E IYEPIL
Sbjct:  246 DIENIVVKNVNGLPITIKDVAKVQFGSAVRYGALTQDGEGEVVGGLVMMLKGANSNDVIERVKERMSEIQKSLPEGVIIEPLLDRSKLIAKTTGTVSQNLMEGALIVIFVLVFLLGNWRGGLIVASTIPLSLLFAFILMNVFDVWANLMSLGAIDFGIIVDGAVIIVEGTVFLLHDKVLKKQNITAKVRNDVAYSASSKMMNSAFFGQLIIPIVFIPILALEGVEGKMFKPMALTFMFAMIGVMILCLTYVPMMSAWFIRTGTKNKTSWGDKFVIWLENIYEPIL 530          
BLAST of mRNA_C-australica_Contig_9809.1.1 vs. uniprot
Match: A0A6N9NIQ3_9FLAO (CusA/CzcA family heavy metal efflux RND transporter n=1 Tax=Acidiluteibacter ferrifornacis TaxID=2692424 RepID=A0A6N9NIQ3_9FLAO)

HSP 1 Score: 447 bits (1150), Expect = 1.270e-143
Identity = 234/285 (82.11%), Postives = 259/285 (90.88%), Query Frame = 1
Query:    1 DIENIVITNLGGLPITIKDVASVQFGHAVRYGAFTMDGKGEAVGGMILMLKGANSNNVINEVKNRVEEIQKSLPEGVHIEPFLDRSALIAKTTNTVSQNLLEGALIVIFVLVFLLGNWRGGLIVATTIPLSLLFAFILMNLFDVWANLMSLGAIDFGIIVDGAVIIVEGTVFLLHDKILKKQNITADVRNEVAYSASSKMMNAAFFGQLIILIVFIPILALQGVEGKMFQPMALTFMFAMIGVMILCLTYVPMMSAWFIRTNTKNKLSWGDRFVLRIEKIYEPIL 855
            D+ENIV+T   GLPIT+KDVA+V+FG A+RYGA T DGKGEAVGGMILMLKGANS+ V++ VK RVE+IQKSLPEGV IEPFLDRS+LIAKTT TVS NL+EGALIVIFVLVFLLGNWRGGLIVA+TIPLSLLFAFILMN+FDVWANLMSLGAIDFGII+DGAVIIVE TVF LHDK+LKK+ IT  VRN VA S++SKMMN+AFFGQLIILIVFIPILAL+GVEGKMFQPMALTFMFAMIGVMILCLTYVPMMSAWFIR    NKLSWGD+FV+++E IYE  L
Sbjct:  246 DLENIVVTTANGLPITVKDVATVRFGQAIRYGALTKDGKGEAVGGMILMLKGANSDEVVDAVKLRVEDIQKSLPEGVSIEPFLDRSSLIAKTTGTVSTNLIEGALIVIFVLVFLLGNWRGGLIVASTIPLSLLFAFILMNVFDVWANLMSLGAIDFGIIIDGAVIIVESTVFFLHDKVLKKKEITEGVRNGVAKSSASKMMNSAFFGQLIILIVFIPILALEGVEGKMFQPMALTFMFAMIGVMILCLTYVPMMSAWFIRVPKNNKLSWGDKFVVKVENIYERSL 530          
BLAST of mRNA_C-australica_Contig_9809.1.1 vs. uniprot
Match: A0A2E4EB78_9FLAO (CusA/CzcA family heavy metal efflux RND transporter n=1 Tax=Crocinitomicaceae bacterium TaxID=2026728 RepID=A0A2E4EB78_9FLAO)

HSP 1 Score: 447 bits (1150), Expect = 1.460e-143
Identity = 230/285 (80.70%), Postives = 259/285 (90.88%), Query Frame = 1
Query:    1 DIENIVITNLGGLPITIKDVASVQFGHAVRYGAFTMDGKGEAVGGMILMLKGANSNNVINEVKNRVEEIQKSLPEGVHIEPFLDRSALIAKTTNTVSQNLLEGALIVIFVLVFLLGNWRGGLIVATTIPLSLLFAFILMNLFDVWANLMSLGAIDFGIIVDGAVIIVEGTVFLLHDKILKKQNITADVRNEVAYSASSKMMNAAFFGQLIILIVFIPILALQGVEGKMFQPMALTFMFAMIGVMILCLTYVPMMSAWFIRTNTKNKLSWGDRFVLRIEKIYEPIL 855
            +IEN+++ N+ GLPI +KDVA VQ+G A+RYGA T DG+GE VGG+++MLKGANSN VI  VK R++EIQKSLP+GV IEP LDRS LIAKTT TVS NL+EGALIVIFVLVFLLGNWRGG+IVA+TIPLSLLFAFI+MN+FDVWANLMSLGAIDFGIIVDGAVIIVEGTVFLLHDK+LKKQ +T +VRNEVA++ASSKMMN+AFFGQLIILIVFIPILALQGVEGKMF+PMALTFMFAMIGVMILCLTYVPMMSAWFIR    NK SWGDRFV+ +E IYEPIL
Sbjct:  246 EIENMLVKNVNGLPIRVKDVAKVQYGKAIRYGALTQDGEGEVVGGLVMMLKGANSNEVIESVKERMKEIQKSLPDGVIIEPLLDRSKLIAKTTGTVSNNLMEGALIVIFVLVFLLGNWRGGVIVASTIPLSLLFAFIMMNVFDVWANLMSLGAIDFGIIVDGAVIIVEGTVFLLHDKLLKKQTVTKEVRNEVAFTASSKMMNSAFFGQLIILIVFIPILALQGVEGKMFKPMALTFMFAMIGVMILCLTYVPMMSAWFIRVGNINKTSWGDRFVIWLENIYEPIL 530          
BLAST of mRNA_C-australica_Contig_9809.1.1 vs. uniprot
Match: A0A7H0VEQ2_9FLAO (CusA/CzcA family heavy metal efflux RND transporter n=3 Tax=Bacteroidetes TaxID=976 RepID=A0A7H0VEQ2_9FLAO)

HSP 1 Score: 442 bits (1136), Expect = 1.530e-141
Identity = 233/285 (81.75%), Postives = 259/285 (90.88%), Query Frame = 1
Query:    1 DIENIVITNLGGLPITIKDVASVQFGHAVRYGAFTMDGKGEAVGGMILMLKGANSNNVINEVKNRVEEIQKSLPEGVHIEPFLDRSALIAKTTNTVSQNLLEGALIVIFVLVFLLGNWRGGLIVATTIPLSLLFAFILMNLFDVWANLMSLGAIDFGIIVDGAVIIVEGTVFLLHDKILKKQNITADVRNEVAYSASSKMMNAAFFGQLIILIVFIPILALQGVEGKMFQPMALTFMFAMIGVMILCLTYVPMMSAWFIRTNTKNKLSWGDRFVLRIEKIYEPIL 855
            DIENIV+ N+  LPI IKDVA VQ+G+AVRYGA T DG+ E VGG++L+LKGANSN+VI  VK R+ EIQKSLPEG+ IEP LDRS LIAKTT+TVS NL+EGALIVIFVLVFLLGNWRGGLIVA+TIPLSLLFAF+LMN+F VWANLMSLGAIDFGII+DGAVIIVE TVFLLH+++LKKQNITA VR+EV+YSASSKMMNAAFFGQLIILIVFIPILALQGVEGKMF+PMALTFMFAMIGVMILCLTYVPMMSAWFIRT+  NK SWGDRFVL +E IY+P L
Sbjct:  246 DIENIVVKNVNNLPIRIKDVAKVQYGNAVRYGALTQDGE-EVVGGLVLLLKGANSNDVIIRVKERMMEIQKSLPEGIVIEPLLDRSKLIAKTTDTVSTNLMEGALIVIFVLVFLLGNWRGGLIVASTIPLSLLFAFVLMNVFGVWANLMSLGAIDFGIIIDGAVIIVESTVFLLHERVLKKQNITAQVRDEVSYSASSKMMNAAFFGQLIILIVFIPILALQGVEGKMFKPMALTFMFAMIGVMILCLTYVPMMSAWFIRTSNSNKASWGDRFVLWLENIYDPTL 529          
BLAST of mRNA_C-australica_Contig_9809.1.1 vs. uniprot
Match: A0A1W2G5E5_9BACT (Cobalt-zinc-cadmium resistance protein CzcA n=1 Tax=Reichenbachiella faecimaris TaxID=692418 RepID=A0A1W2G5E5_9BACT)

HSP 1 Score: 441 bits (1133), Expect = 4.210e-141
Identity = 229/285 (80.35%), Postives = 257/285 (90.18%), Query Frame = 1
Query:    1 DIENIVITNLGGLPITIKDVASVQFGHAVRYGAFTMDGKGEAVGGMILMLKGANSNNVINEVKNRVEEIQKSLPEGVHIEPFLDRSALIAKTTNTVSQNLLEGALIVIFVLVFLLGNWRGGLIVATTIPLSLLFAFILMNLFDVWANLMSLGAIDFGIIVDGAVIIVEGTVFLLHDKILKKQNITADVRNEVAYSASSKMMNAAFFGQLIILIVFIPILALQGVEGKMFQPMALTFMFAMIGVMILCLTYVPMMSAWFIRTNTKNKLSWGDRFVLRIEKIYEPIL 855
            D+ENIV+    GLPI IKDVA VQ+G A+RYGA T DG GE VGG+++MLKGANSN+VI+ VK R++ IQ+SLPEGV IEP LDRS LIAKTT TV QNL EGALIVIFVLVFLLGNWRGGLIVA+TIPLSLLFAFILMN+FDVWANLMSLGAIDFGIIVDGAVIIVE TVFLLHD++LKKQ++T ++R+EVAYSASSKMMN+AFFGQLIILIVFIPILAL+GVEGKMFQPMALTFMFAMIGVMILCLTYVPMMSAWFIR    +K+SWGDRFV+ +E IYEP+L
Sbjct:  246 DLENIVVKTTNGLPIQIKDVAKVQYGSAIRYGALTQDGVGEVVGGLVMMLKGANSNDVISNVKERMKLIQQSLPEGVIIEPLLDRSKLIAKTTGTVGQNLTEGALIVIFVLVFLLGNWRGGLIVASTIPLSLLFAFILMNVFDVWANLMSLGAIDFGIIVDGAVIIVESTVFLLHDRVLKKQSVTKELRDEVAYSASSKMMNSAFFGQLIILIVFIPILALEGVEGKMFQPMALTFMFAMIGVMILCLTYVPMMSAWFIRMGNTDKVSWGDRFVVWLENIYEPVL 530          
BLAST of mRNA_C-australica_Contig_9809.1.1 vs. uniprot
Match: UPI000379DB97 (CusA/CzcA family heavy metal efflux RND transporter n=1 Tax=Flexithrix dorotheae TaxID=70993 RepID=UPI000379DB97)

HSP 1 Score: 440 bits (1132), Expect = 5.880e-141
Identity = 232/285 (81.40%), Postives = 256/285 (89.82%), Query Frame = 1
Query:    1 DIENIVITNLGGLPITIKDVASVQFGHAVRYGAFTMDGKGEAVGGMILMLKGANSNNVINEVKNRVEEIQKSLPEGVHIEPFLDRSALIAKTTNTVSQNLLEGALIVIFVLVFLLGNWRGGLIVATTIPLSLLFAFILMNLFDVWANLMSLGAIDFGIIVDGAVIIVEGTVFLLHDKILKKQNITADVRNEVAYSASSKMMNAAFFGQLIILIVFIPILALQGVEGKMFQPMALTFMFAMIGVMILCLTYVPMMSAWFIRTNTKNKLSWGDRFVLRIEKIYEPIL 855
            D+ENIV+ N+ GLPI IKDVASVQ G AVRYGA T DG GE VGG+++MLKGANSN+VI+ VK R+E IQ+SLPEGV IEP LDRS LIAKTT+TV QNL EGALIVIFVLVFLLGNWRGGLIVA+TIPLSLLFAFILMN FDVWANLMSLGAIDFGIIVDGAVIIVE TVFLLHD+ILKKQ+I +++R+EVAY ASSKMMN+AFFGQLIILIVFIPILALQGVEGKMF+PMALTFMFAMIGVMILCLTYVPMMSAWFIR   + K+ WGDRFV+ +E  YEPIL
Sbjct:  246 DLENIVVKNINGLPIRIKDVASVQHGSAVRYGALTQDGTGEVVGGLVMMLKGANSNDVISSVKERMELIQQSLPEGVIIEPLLDRSKLIAKTTSTVGQNLTEGALIVIFVLVFLLGNWRGGLIVASTIPLSLLFAFILMNAFDVWANLMSLGAIDFGIIVDGAVIIVESTVFLLHDRILKKQSINSELRDEVAYKASSKMMNSAFFGQLIILIVFIPILALQGVEGKMFKPMALTFMFAMIGVMILCLTYVPMMSAWFIRIGKQKKMMWGDRFVIWLENRYEPIL 530          
BLAST of mRNA_C-australica_Contig_9809.1.1 vs. uniprot
Match: A0A2A5HNP9_9FLAO (CusA/CzcA family heavy metal efflux RND transporter n=1 Tax=Flavobacteriales bacterium TaxID=2021391 RepID=A0A2A5HNP9_9FLAO)

HSP 1 Score: 436 bits (1121), Expect = 2.290e-139
Identity = 229/285 (80.35%), Postives = 255/285 (89.47%), Query Frame = 1
Query:    1 DIENIVITNLGGLPITIKDVASVQFGHAVRYGAFTMDGKGEAVGGMILMLKGANSNNVINEVKNRVEEIQKSLPEGVHIEPFLDRSALIAKTTNTVSQNLLEGALIVIFVLVFLLGNWRGGLIVATTIPLSLLFAFILMNLFDVWANLMSLGAIDFGIIVDGAVIIVEGTVFLLHDKILKKQNITADVRNEVAYSASSKMMNAAFFGQLIILIVFIPILALQGVEGKMFQPMALTFMFAMIGVMILCLTYVPMMSAWFIRTNTKNKLSWGDRFVLRIEKIYEPIL 855
            DIENIV+ N+  LPI+IKDVA V+FG AVRYGA T DG+GE VGG+I+MLKGANSN VI  VK+R+EEIQKSLPEGV IEP LDRS LIAKTT TV+ NLLEGALIVIFVLVFLLGNWRGGL+VA+TIPLSLLFAFI+M+ F VWANLMSLGAIDFGII+DGAVIIVE TVF+LH  ILKKQNITA VR+ VAY +SSKMMN+AFFGQLIILIVFIPILAL+GVEGKMF+PMALTFMFAMIGVMILCLTYVPMMSAWFIR + K K SWGDRFV+ +E +YEP+L
Sbjct:  246 DIENIVVKNINNLPISIKDVAKVKFGSAVRYGALTQDGEGEVVGGLIMMLKGANSNEVIVNVKDRMEEIQKSLPEGVIIEPLLDRSKLIAKTTGTVTTNLLEGALIVIFVLVFLLGNWRGGLVVASTIPLSLLFAFIMMHYFGVWANLMSLGAIDFGIIIDGAVIIVESTVFMLHGIILKKQNITAKVRDAVAYKSSSKMMNSAFFGQLIILIVFIPILALEGVEGKMFKPMALTFMFAMIGVMILCLTYVPMMSAWFIRPDKKEKASWGDRFVIWLENLYEPVL 530          
BLAST of mRNA_C-australica_Contig_9809.1.1 vs. uniprot
Match: A0A2E0VTX8_9BACT (CusA/CzcA family heavy metal efflux RND transporter n=1 Tax=Saprospirales bacterium TaxID=2026790 RepID=A0A2E0VTX8_9BACT)

HSP 1 Score: 434 bits (1116), Expect = 1.040e-138
Identity = 227/285 (79.65%), Postives = 258/285 (90.53%), Query Frame = 1
Query:    1 DIENIVITNLGGLPITIKDVASVQFGHAVRYGAFTMDGKGEAVGGMILMLKGANSNNVINEVKNRVEEIQKSLPEGVHIEPFLDRSALIAKTTNTVSQNLLEGALIVIFVLVFLLGNWRGGLIVATTIPLSLLFAFILMNLFDVWANLMSLGAIDFGIIVDGAVIIVEGTVFLLHDKILKKQNITADVRNEVAYSASSKMMNAAFFGQLIILIVFIPILALQGVEGKMFQPMALTFMFAMIGVMILCLTYVPMMSAWFIRTNTKNKLSWGDRFVLRIEKIYEPIL 855
            DIE++V+ N+ G+PITIKDVA V+FG AVRYGA T DG GE VGG ++MLKGANSN+VI  VK R+ +IQKSLPEG+ IEPFLDRS LI +TT TVS+NL+EGALIVIFVLVFLLGNWRGG++VA+TIPL+LLFAFI+MN+F+VWANLMSLGAIDFGIIVDGAVIIVE TVFLLH K+LKKQ IT +VRNEVA +ASS+MM+AAFFGQLIILIVFIPILALQGVEGKMF+PMALTFMFAM+GVMILCLTYVPMMSAWFIRT + NK SWGDRFV  +EKIYEPIL
Sbjct:  246 DIEDMVVKNINGIPITIKDVAKVKFGTAVRYGALTQDGVGEIVGGQVMMLKGANSNDVIVRVKERMAQIQKSLPEGIIIEPFLDRSKLIGRTTYTVSKNLIEGALIVIFVLVFLLGNWRGGIVVASTIPLALLFAFIMMNVFNVWANLMSLGAIDFGIIVDGAVIIVESTVFLLHQKLLKKQKITPEVRNEVAATASSQMMSAAFFGQLIILIVFIPILALQGVEGKMFKPMALTFMFAMMGVMILCLTYVPMMSAWFIRTVSDNKPSWGDRFVAWLEKIYEPIL 530          
BLAST of mRNA_C-australica_Contig_9809.1.1 vs. uniprot
Match: UPI001C76B31C (Multidrug resistance protein MdtC n=2 Tax=Flavobacteriales TaxID=200644 RepID=UPI001C76B31C)

HSP 1 Score: 431 bits (1109), Expect = 1.200e-137
Identity = 228/285 (80.00%), Postives = 256/285 (89.82%), Query Frame = 1
Query:    1 DIENIVITNLGGLPITIKDVASVQFGHAVRYGAFTMDGKGEAVGGMILMLKGANSNNVINEVKNRVEEIQKSLPEGVHIEPFLDRSALIAKTTNTVSQNLLEGALIVIFVLVFLLGNWRGGLIVATTIPLSLLFAFILMNLFDVWANLMSLGAIDFGIIVDGAVIIVEGTVFLLHDKILKKQNITADVRNEVAYSASSKMMNAAFFGQLIILIVFIPILALQGVEGKMFQPMALTFMFAMIGVMILCLTYVPMMSAWFIRTNTKNKLSWGDRFVLRIEKIYEPIL 855
            DIE+IVI N+  +PIT+KDVA+VQFG A++YG+FT DGKGEAVGGMILMLKGANSN+VIN VK R++EIQKSLP GV IEPFLDRS LIAKTT TVSQNL+EGALIVIFVLVFLLGNWRGGLIVA+TIPLSLLFAFILM++F VWANLMSLGAIDFGIIVDGAVIIVEGTVFL+HDK+LK Q I A+ R+E+A  ++SKMMN+AFFGQLIILIVFIPILALQGVEGKMF+PMALTFMFAMIGVMILCLTYVPMMSAWF+R   K K SWGD+ V   E+IY+  L
Sbjct:  246 DIEHIVIKNVNSIPITVKDVATVQFGKAIKYGSFTKDGKGEAVGGMILMLKGANSNDVINAVKERIDEIQKSLPNGVRIEPFLDRSDLIAKTTGTVSQNLIEGALIVIFVLVFLLGNWRGGLIVASTIPLSLLFAFILMHVFGVWANLMSLGAIDFGIIVDGAVIIVEGTVFLMHDKLLKGQKINAEDRDEIAKKSASKMMNSAFFGQLIILIVFIPILALQGVEGKMFKPMALTFMFAMIGVMILCLTYVPMMSAWFLRPGAKKK-SWGDKLVEFFERIYDKTL 529          
BLAST of mRNA_C-australica_Contig_9809.1.1 vs. uniprot
Match: A0A7C5L3F0_9BACT (Efflux RND transporter permease subunit (Fragment) n=1 Tax=Phaeodactylibacter sp. TaxID=1940289 RepID=A0A7C5L3F0_9BACT)

HSP 1 Score: 410 bits (1053), Expect = 1.580e-137
Identity = 217/285 (76.14%), Postives = 245/285 (85.96%), Query Frame = 1
Query:    1 DIENIVITNLGGLPITIKDVASVQFGHAVRYGAFTMDGKGEAVGGMILMLKGANSNNVINEVKNRVEEIQKSLPEGVHIEPFLDRSALIAKTTNTVSQNLLEGALIVIFVLVFLLGNWRGGLIVATTIPLSLLFAFILMNLFDVWANLMSLGAIDFGIIVDGAVIIVEGTVFLLHDKILKKQNITADVRNEVAYSASSKMMNAAFFGQLIILIVFIPILALQGVEGKMFQPMALTFMFAMIGVMILCLTYVPMMSAWFIRTNTKNKLSWGDRFVLRIEKIYEPIL 855
            D+ ++VITN+ GLPI IKDVA V +G AVRYGA T DG+GEAVGG+I+MLK ANSN VI  VK R+ EIQKSLPEG+ IEPFLDRS LIA TT+T+S NLLEGALIVIFVLVFLLGNWRGGLIVA+TIPLSLLFAFI+M++F+VWANLMSLGAIDFGIIVDGAVIIVE TVFLLH ++LK   I   VR+E A  ASSKMMN+AFFGQLIILIVFIPILALQGVEGKMF+PMALTFMFAM+GVMILCLTYVPMMSAWF++     K SWGDRFV  +E+ Y  +L
Sbjct:  246 DLRHVVITNVNGLPIMIKDVAEVGYGQAVRYGAMTKDGEGEAVGGIIMMLKDANSNEVIEAVKERITEIQKSLPEGISIEPFLDRSKLIANTTSTISNNLLEGALIVIFVLVFLLGNWRGGLIVASTIPLSLLFAFIMMHIFNVWANLMSLGAIDFGIIVDGAVIIVESTVFLLHQRLLKGGKIDGAVRDETAKEASSKMMNSAFFGQLIILIVFIPILALQGVEGKMFKPMALTFMFAMMGVMILCLTYVPMMSAWFLKIGKGEKRSWGDRFVEWLERRYSGVL 530          
The following BLAST results are available for this feature:
BLAST of mRNA_C-australica_Contig_9809.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A3B9H5P9_9FLAO7.270e-16185.96CusA/CzcA family heavy metal efflux RND transporte... [more]
A0A6N9NIQ3_9FLAO1.270e-14382.11CusA/CzcA family heavy metal efflux RND transporte... [more]
A0A2E4EB78_9FLAO1.460e-14380.70CusA/CzcA family heavy metal efflux RND transporte... [more]
A0A7H0VEQ2_9FLAO1.530e-14181.75CusA/CzcA family heavy metal efflux RND transporte... [more]
A0A1W2G5E5_9BACT4.210e-14180.35Cobalt-zinc-cadmium resistance protein CzcA n=1 Ta... [more]
UPI000379DB975.880e-14181.40CusA/CzcA family heavy metal efflux RND transporte... [more]
A0A2A5HNP9_9FLAO2.290e-13980.35CusA/CzcA family heavy metal efflux RND transporte... [more]
A0A2E0VTX8_9BACT1.040e-13879.65CusA/CzcA family heavy metal efflux RND transporte... [more]
UPI001C76B31C1.200e-13780.00Multidrug resistance protein MdtC n=2 Tax=Flavobac... [more]
A0A7C5L3F0_9BACT1.580e-13776.14Efflux RND transporter permease subunit (Fragment)... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-australica_Contig_9809contigC-australica_Contig_9809:1..855 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Chrysoparadoxa australica CS_1217 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog1121904.ARBP01000035_gene1747
PFAMsACR_tran,OEP
Model size855
Max annot lvl976|Bacteroidetes
KEGG koko:K15726
KEGG TC2.A.6.1.2
Hectar predicted targeting categoryother localisation
Exons1
Evalue9.64e-142
EggNOG OGsCOG3696@1|root,COG3696@2|Bacteria,4P36A@976|Bacteroidetes,47JC4@768503|Cytophagia
DescriptionBelongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
Cds size855
COG categoryP
BRITEko00000,ko02000
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1682588848.0140934-CDS-C-australica_Contig_9809:0..8551682588848.0140934-CDS-C-australica_Contig_9809:0..855Chrysoparadoxa australica CS_1217CDSC-australica_Contig_9809 1..855 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_C-australica_Contig_9809.1.1prot_C-australica_Contig_9809.1.1Chrysoparadoxa australica CS_1217polypeptideC-australica_Contig_9809 1..855 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_C-australica_Contig_9809.1.1

>prot_C-australica_Contig_9809.1.1 ID=prot_C-australica_Contig_9809.1.1|Name=mRNA_C-australica_Contig_9809.1.1|organism=Chrysoparadoxa australica CS_1217|type=polypeptide|length=285bp
DIENIVITNLGGLPITIKDVASVQFGHAVRYGAFTMDGKGEAVGGMILML
KGANSNNVINEVKNRVEEIQKSLPEGVHIEPFLDRSALIAKTTNTVSQNL
LEGALIVIFVLVFLLGNWRGGLIVATTIPLSLLFAFILMNLFDVWANLMS
LGAIDFGIIVDGAVIIVEGTVFLLHDKILKKQNITADVRNEVAYSASSKM
MNAAFFGQLIILIVFIPILALQGVEGKMFQPMALTFMFAMIGVMILCLTY
VPMMSAWFIRTNTKNKLSWGDRFVLRIEKIYEPIL
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mRNA from alignment at C-australica_Contig_9809:1..855+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_C-australica_Contig_9809.1.1 ID=mRNA_C-australica_Contig_9809.1.1|Name=mRNA_C-australica_Contig_9809.1.1|organism=Chrysoparadoxa australica CS_1217|type=mRNA|length=855bp|location=Sequence derived from alignment at C-australica_Contig_9809:1..855+ (Chrysoparadoxa australica CS_1217)
GATATTGAAAACATTGTGATAACCAATTTAGGTGGTTTGCCAATCACCAT TAAAGACGTCGCAAGTGTCCAATTCGGCCATGCAGTGCGATATGGTGCAT TTACAATGGATGGCAAAGGTGAGGCAGTCGGTGGTATGATACTTATGCTA AAAGGAGCAAATTCCAACAACGTCATAAATGAGGTGAAAAATCGCGTTGA AGAAATACAGAAATCATTGCCAGAAGGAGTACATATTGAACCCTTTTTGG ACCGAAGTGCTTTGATTGCCAAAACCACAAACACCGTAAGTCAAAACCTT TTGGAAGGTGCCTTAATCGTTATTTTCGTTTTGGTATTCCTTCTCGGGAA CTGGAGAGGTGGCTTGATTGTAGCCACTACCATTCCCCTTTCTTTGCTTT TCGCTTTCATCCTAATGAATCTTTTTGACGTTTGGGCCAATTTGATGAGC CTAGGAGCAATTGATTTCGGAATAATTGTGGATGGTGCTGTAATCATTGT AGAAGGAACCGTGTTTTTGCTCCATGATAAAATCTTAAAAAAGCAAAACA TTACAGCCGACGTAAGAAACGAAGTAGCCTACTCTGCCTCCAGTAAAATG ATGAACGCAGCATTCTTCGGGCAATTGATCATCCTCATCGTCTTTATTCC AATTCTAGCATTGCAAGGCGTTGAAGGAAAAATGTTTCAACCAATGGCCC TTACTTTCATGTTTGCCATGATAGGTGTAATGATCCTCTGTTTGACTTAT GTTCCTATGATGTCGGCATGGTTCATTCGCACAAACACAAAGAATAAATT GTCTTGGGGCGACCGATTCGTGTTGAGGATTGAGAAAATCTATGAACCAA TATTG
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Coding sequence (CDS) from alignment at C-australica_Contig_9809:1..855+

>mRNA_C-australica_Contig_9809.1.1 ID=mRNA_C-australica_Contig_9809.1.1|Name=mRNA_C-australica_Contig_9809.1.1|organism=Chrysoparadoxa australica CS_1217|type=CDS|length=855bp|location=Sequence derived from alignment at C-australica_Contig_9809:1..855+ (Chrysoparadoxa australica CS_1217)
GATATTGAAAACATTGTGATAACCAATTTAGGTGGTTTGCCAATCACCAT
TAAAGACGTCGCAAGTGTCCAATTCGGCCATGCAGTGCGATATGGTGCAT
TTACAATGGATGGCAAAGGTGAGGCAGTCGGTGGTATGATACTTATGCTA
AAAGGAGCAAATTCCAACAACGTCATAAATGAGGTGAAAAATCGCGTTGA
AGAAATACAGAAATCATTGCCAGAAGGAGTACATATTGAACCCTTTTTGG
ACCGAAGTGCTTTGATTGCCAAAACCACAAACACCGTAAGTCAAAACCTT
TTGGAAGGTGCCTTAATCGTTATTTTCGTTTTGGTATTCCTTCTCGGGAA
CTGGAGAGGTGGCTTGATTGTAGCCACTACCATTCCCCTTTCTTTGCTTT
TCGCTTTCATCCTAATGAATCTTTTTGACGTTTGGGCCAATTTGATGAGC
CTAGGAGCAATTGATTTCGGAATAATTGTGGATGGTGCTGTAATCATTGT
AGAAGGAACCGTGTTTTTGCTCCATGATAAAATCTTAAAAAAGCAAAACA
TTACAGCCGACGTAAGAAACGAAGTAGCCTACTCTGCCTCCAGTAAAATG
ATGAACGCAGCATTCTTCGGGCAATTGATCATCCTCATCGTCTTTATTCC
AATTCTAGCATTGCAAGGCGTTGAAGGAAAAATGTTTCAACCAATGGCCC
TTACTTTCATGTTTGCCATGATAGGTGTAATGATCCTCTGTTTGACTTAT
GTTCCTATGATGTCGGCATGGTTCATTCGCACAAACACAAAGAATAAATT
GTCTTGGGGCGACCGATTCGTGTTGAGGATTGAGAAAATCTATGAACCAA
TATTG
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