mRNA_C-australica_Contig_98.5.4 (mRNA) Chrysoparadoxa australica CS_1217
You are viewing an mRNA, more information available on the corresponding polypeptide page
Overview
Homology
BLAST of mRNA_C-australica_Contig_98.5.4 vs. uniprot
Match: A0A6H5JKX8_9PHAE (AB hydrolase-1 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JKX8_9PHAE) HSP 1 Score: 294 bits (753), Expect = 1.320e-93 Identity = 142/254 (55.91%), Postives = 179/254 (70.47%), Query Frame = 1 Query: 145 NIPYVILPGFGNCAQDYVDPFNKGEE-GLVGSLEQRGVPSFVLPLKRSDWFKVLRGLGSKDFWEGKAPPTGPAYKWYLDLVKKTVDQARETCGSDRVVLCGHSAGGWLGRAVMGDGTWSEGKATSDVVAGLVTLGAPHFPPPVETTNDMTRGALTFTSKMYPNCYLSEKGIFYVTVAGTAVEGSEEAPRGDRWRFAFESYKTVAGDGNQIGDGYVPEGSAHLDGAVQISLKDVYHSVDTPEMWYGSEKVVDRWL 903 P VILPGFGN A+DY +P + GE+ +LE+RG+ +FV+ ++RSDW KV + + DFW+G P GPAY WYL VK+TV + E G+D+V+L GHSAGGWL RA + G W EG A+ DVVAGLVTLG+PHF P+ DMTRGALTFTS YP +L +KGIFYVTV G A+ G ++APR R RFA+ SY+TV G+G +GD VP HL+GA Q++L V+HSVD P+ WYGSE VVDRWL Sbjct: 40 KFPVVILPGFGNDARDYTNPLDGGEDKAFASALERRGLKTFVVAVERSDWLKVASAVLTLDFWKGTCRPNGPAYSWYLQKVKETVRTSLEETGADKVLLVGHSAGGWLARAALAKGMWEEGVASEDVVAGLVTLGSPHFAGPM----DMTRGALTFTSDEYPGAFLKDKGIFYVTVGGAALLGEKDAPRRSRARFAYGSYQTVCGEGATMGDACVPLVYTHLEGAEQVTLDGVFHSVDKPDEWYGSEGVVDRWL 289
BLAST of mRNA_C-australica_Contig_98.5.4 vs. uniprot
Match: A0A0G4FYU4_VITBC (GPI inositol-deacylase n=2 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4FYU4_VITBC) HSP 1 Score: 260 bits (664), Expect = 3.860e-79 Identity = 131/272 (48.16%), Postives = 173/272 (63.60%), Query Frame = 1 Query: 151 PYVILPGFGNCAQDYVDPFNKGEE-GLVGSLEQRGVPSFVLPLKRSDWFKVLRGLGSKDFWEGKAPPTGPAYKWYLDLVKKTVDQARET-----CGSDRVVLCGHSAGGWLGRAVMGDGTW----------SEGKATSDVVAGLVTLGAPHFPPPVETTNDMTRGALTFTSKMYPNCYLSEKGIFYVTVAGTAVEGSEEAPRGDRWRFAFESYKTVAGDGNQI-GDGYVPEGSAHLDGAVQISLKDVYHSVDTPEMWYGSEKVVDRWLEVSR 915 P VILPGFGN A DY +P GE+ L +LE+RG +V+P+ R +W V R ++ FW G+ P GP ++WYLD V+ TVD+ R +VVL GHSAGGWL RAVMGDGTW S + T D+V G+++LG+PH+PPP DMTRG LT+ + YP + EKGIFYV+V G AV G +A RG RFAF+SY+ V G G+ + GDG VP SA+LDG+ +++ VYHS++ P+ WYGSE VVD WL ++ Sbjct: 91 PIVILPGFGNDALDYTNPMKMGEDTSLKAALERRGYNVYVVPIARREWLSVARDFLTRRFWTGECRPDGPGFRWYLDRVRTTVDRVRRRDWPGGALPPKVVLVGHSAGGWLARAVMGDGTWRNETDEETGESTVEYTQDIVQGVISLGSPHYPPPPPAL-DMTRGVLTYVCREYPGTFHKEKGIFYVSVVGDAVTGDVQADRGTLERFAFQSYEVVCGSGDGVRGDGVVPLRSAYLDGSRCVTMSGVYHSINVPDSWYGSENVVDTWLAAAQ 361
BLAST of mRNA_C-australica_Contig_98.5.4 vs. uniprot
Match: A0A835Z797_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z797_9STRA) HSP 1 Score: 249 bits (637), Expect = 1.870e-76 Identity = 129/260 (49.62%), Postives = 164/260 (63.08%), Query Frame = 1 Query: 151 PYVILPGFGNCAQDYVDPFNKG-EEGLVGSLEQRGVPSFVLPLKRSDWFKVLRGLGSKDFWEGKAPPTGPAYKWYLDLVKKTVDQARETCGSDRVVLCGHSAGGWLGRAVMGDGTWS-----EGKATS-----DVVAGLVTLGAPHFPPPVETTNDMTRGALTFTSKMYPNCYLSEKGIFYVTVAGTAVEGSEEAPRGDRWRFAFESYKTVAGDGNQIGDGYVPEGSAHLDGAVQISLKDVYHSVDTPEMWYGSEKVVDR 897 P+VILPGF N DY +PFN+G E LV L +RGV S+VLPL+R +WF V+RG FW G APP AY WYL+ V+ TV ARE G+ +V LCGHSAGGWL RA +GDGTWS G+A + DVV G+VTLGAPHF P +L ++G+ YVTVAG A+ G+++APR D R A+ SY+ V G+G GDG VP SAHL+GA+QI+L V H+VDTP WYG+++ + R Sbjct: 67 PFVILPGFSNADMDYFNPFNQGYETSLVAGLARRGVTSYVLPLERKEWFNVVRGFREAAFWRGAAPPEC-AYGWYLEKVRATVALAREETGAPKVALCGHSAGGWLARAALGDGTWSTERDASGQAAAIVRSEDVVCGVVTLGAPHF----------------------PGAFLKDRGVQYVTVAGAAIRGAKDAPRADPARRAYNSYQLVCGEGETDGDGCVPVVSAHLEGALQITLDGVKHTVDTPNTWYGTDENIGR 303
BLAST of mRNA_C-australica_Contig_98.5.4 vs. uniprot
Match: W7T4S9_9STRA (AB hydrolase-1 domain-containing protein n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7T4S9_9STRA) HSP 1 Score: 238 bits (606), Expect = 1.100e-71 Identity = 122/263 (46.39%), Postives = 164/263 (62.36%), Query Frame = 1 Query: 151 PYVILPGFGNCAQDYVDPFNKGEE-GLVGSLEQRGVPSFVLPLKRSDWFKVLRGLGSKDFWEGKAPPTGPAYKWYLDLVKKTVDQARETCGSDRVVLCGHSAGGWLGRAVMGDGTWS--EGKATSDVVAGLVTLGAPHFPPPVETTNDMTRGALTFTSKMYPNCYLSEKGIFYVTVAGTAVEGSEEAPRGDRWR---------FAFESYKTVAGDGNQIGDGYVPEGSAHLDGAVQISLKDVYHSVDTPEMWYGSEKVVDRWL 903 P VI PGFGN DY++P N GEE G+V +L +RG P +V+P+KR+DW K GL + FW P ++ WYL+ V +TV++A + ++ GHSAGGWL RA +GDG W+ K D+V G VTLG PH PP +TRGAL YP +L +G+FY+TVAG AVEG E P+G R FAF SY V G G+ +GDG VP +AHL+GA Q++L++V+HS++ P+ WYGSE+V+D WL Sbjct: 45 PVVICPGFGNDQIDYLNPMNLGEEAGMVQALRRRGFPVYVVPVKRTDWLKFANGLFTPSFWSQTMTPRDLSFGWYLNKVVQTVERAASEHPGRKALVVGHSAGGWLARAALGDGAWTGKAAKEVRDLVQGCVTLGTPHLPPAPPGVC-VTRGALGHVHLNYPGAFLKPQGLFYMTVAGVAVEGRRE-PQGAGRRERRGGSIEDFAFRSYVQVCGRGDVVGDGVVPLEAAHLEGAKQVNLQNVFHSINAPKAWYGSEEVIDSWL 305
BLAST of mRNA_C-australica_Contig_98.5.4 vs. uniprot
Match: L1JBA7_GUITC (GPI inositol-deacylase n=1 Tax=Guillardia theta (strain CCMP2712) TaxID=905079 RepID=L1JBA7_GUITC) HSP 1 Score: 236 bits (601), Expect = 2.030e-70 Identity = 118/265 (44.53%), Postives = 167/265 (63.02%), Query Frame = 1 Query: 157 VILPGFGNCAQDYVDPFNKG-EEGLVGSLEQRGVPSFVLPLKRSDWFKVLRGLGSKDFWEGKAPPTGPAYKWYLDLVKKTVDQARETCGSDRVVLCGHSAGGWLGRAVMGDGTWSEGKATS---DVVAGLVTLGAPHFPPPVETTN--DMTRGALTFTSKMYPNCYLSEKGIFYVTVAGTAVEGSEEAPRGDRWRFAFESYKTVAGDGNQIGDGYVPEGSAHLDGAVQISLKDVYHSVDTPEM--------WYGSEKVVDRWLEV 909 VILPGFGN +DY+DPF G E+ + +LE+RG V+PLKR+ W VL G+ + FW GK+ P P Y WY+++ ++ + +A E VV+ GHSAGGWLGRAV+GDGTW + + D+++ V+LG PH PP + DMTRGALT+T + P +L+ + + YVTV + G +E RG R A+ESY+ V G+G+ +GDG VP S+HL+G+ Q+ LK YHS+ +P M WYGS+ ++D WL V Sbjct: 73 VILPGFGNAQEDYIDPFGCGFEQSITCALEKRGHQVQVMPLKRAQWLNVLWGIFTLSFWLGKSSPYEPGYGWYVNMARREISRAYEASNKTPVVVIGHSAGGWLGRAVLGDGTWRDEDTKTRIVDMISCFVSLGTPHSPPSSNAKDIMDMTRGALTWTHENLPGAFLAPR-VPYVTVGSDLIPGDKEGARGSLGRSAYESYRLVCGEGSVLGDGVVPLQSSHLEGSTQVDLK-CYHSISSPRMPEYEIRSTWYGSDSLIDSWLNV 335
BLAST of mRNA_C-australica_Contig_98.5.4 vs. uniprot
Match: A0A4D9CVP3_9STRA (GPI inositol-deacylase n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CVP3_9STRA) HSP 1 Score: 231 bits (588), Expect = 3.820e-69 Identity = 119/257 (46.30%), Postives = 160/257 (62.26%), Query Frame = 1 Query: 169 GFGNCAQDYVDPFNKGEE-GLVGSLEQRGVPSFVLPLKRSDWFKVLRGLGSKDFWEGKAPPTGPAYKWYLDLVKKTVDQARETCGSDRVVLCGHSAGGWLGRAVMGDGTWS--EGKATSDVVAGLVTLGAPHFPPPVETTNDMTRGALTFTSKMYPNCYLSEKGIFYVTVAGTAVEGSEEAPRGDRWR---------FAFESYKTVAGDGNQIGDGYVPEGSAHLDGAVQISLKDVYHSVDTPEMWYGSEKVVDRWL 903 GFGN DY++P N GEE G+V +L +RG P +V+P+KR+DW K GL + FW P ++ WYL+ V +TV++A + ++ GHSAGGWL RA +GDG W+ K D+V G VTLG PH PP +TRGAL YP +L +G+FY+TVAG AVEG E PRG R FAF SY V G G+ +GDG VP +AHL+GA Q++L++V+HS++ P+ WYGSE+V+D WL Sbjct: 40 GFGNDQIDYLNPRNLGEEAGMVQALRRRGFPVYVVPVKRTDWLKFANGLFTPSFWSQTMTPRDLSFGWYLNKVVQTVERAASEHPGRKALVVGHSAGGWLARAALGDGAWTGKAAKEVRDLVQGCVTLGTPHLPPAPPGVC-VTRGALGHVHLNYPGAFLKPQGLFYMTVAGVAVEGRRE-PRGAGGRERGGGSIEDFAFRSYVQVCGRGDVVGDGVVPLEAAHLEGAKQVNLQNVFHSINAPKAWYGSEEVIDSWL 294
BLAST of mRNA_C-australica_Contig_98.5.4 vs. uniprot
Match: A0A7S0SUC9_9STRA (GPI inositol-deacylase n=1 Tax=Chromulina nebulosa TaxID=96789 RepID=A0A7S0SUC9_9STRA) HSP 1 Score: 224 bits (571), Expect = 1.030e-66 Identity = 115/263 (43.73%), Postives = 163/263 (61.98%), Query Frame = 1 Query: 145 NIPYVILPGFGNCAQDYVDPFNKGEE--GLVGSLEQRGVPSFVLPLKRSDWFKVLRGLGSKDFWEGKAPPTGPAYKWYLDLVKKTVDQARETC-GSDRVVLCGHSAGGWLGRAVMGDGTW-SEGKATSDVVAGLVTLGAPHFPPPVETTNDMTRGALTFTSKMYPNCYLSEKGIFYVTVAGTAVEGSEEAPRGDRWRFAFESYKTVAGD----GNQIGDGYVPEGSAHLDGAVQISLKDVYHSVDTPE-MWYGSEKVVDRWLE 906 ++ ++ILPGFGN A DY D F E GL+ +L +RG+ + + PLKR WF + +GL S D + P +K+Y D++ V + E G+D++VL HSAGGWL R +M DG W D++AG++TLGAPH PPP + DMTRGA T+ ++ YP CYL+ + I YVTV GTAV G + AP+ FA+++YK + G+ + IGDG VP S HL+G++QI++ VYH V P WYG + ++D WLE Sbjct: 28 SLKFLILPGFGNDALDYTDEFRPEIEYSGLLTNLVKRGIDTQIAPLKRLSWFNIAKGLFSVDIYRNTCKPD-KLFKFYYDIIDSKVREMHEQSNGNDKIVLVCHSAGGWLARGMMSDGNWIGSNTPVEDMIAGIITLGAPHIPPP-DKNEDMTRGAWTYVNENYPGCYLNNR-ISYVTVMGTAVRGDQNAPKQSFEGFAYDAYKKLRGEILTENDIIGDGLVPVSSGHLEGSLQINIPGVYHGVIAPNNCWYGGDHIIDLWLE 287
BLAST of mRNA_C-australica_Contig_98.5.4 vs. uniprot
Match: A0A7S2LG03_9STRA (GPI inositol-deacylase n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2LG03_9STRA) HSP 1 Score: 225 bits (574), Expect = 3.050e-66 Identity = 128/298 (42.95%), Postives = 174/298 (58.39%), Query Frame = 1 Query: 76 GVLKIVMGCLALLRAVEGLVIGHNIPYVILPGFGNCAQDYVDPFNKGEEGLVGSLEQRGVPS---FVLPLKRSDWFKV-LRGLGSKDFWEGKAPPTGPAYKWYLDLVKKTVDQ-ARETCGSDRVVLCGHSAGGWLGRAVMGDGTW----------SEGKATSDVVAGLVTLGAPHFPPPVETTNDMTRGALTFTSKMYPNCYLSEKGIFYVTVAGTAVEGSEEAPRGDRWR-----FAFESYKTVAGDGNQIGDGYVPEGSAHLDGAVQISLKDVYHSVDTPEMWYGSEKVVDRWLEV 909 G K ++ L++ E ++ + ++ILPGFGN +DY P LV +L RG VLP+KRSDW KV L G FW+ A PT PA++WYL+LV V + E +VVL GHSAGGWL RA +G GT S + D + G+V+LGAPH PPP E DMTRGAL T++++P + G FYVTVAGTA+ G E+ FA+ SYK V GDGN IGDG VP ++HLDGA Q++L++ +HS++ PE WYG+++ +D+W +V Sbjct: 65 GANKNILNGAELVKPTEAML--EKVHFLILPGFGNAPEDYTMP-----RSLVPTLLSRGWSENNISVLPMKRSDWLKVFLCGALDLKFWQADAAPTRPAFRWYLELVASEVKRIVEEEKPETKVVLVGHSAGGWLARASVGFGTTEVYPEREVMDSNVQVALDNILGIVSLGAPHLPPP-EGEMDMTRGALRITNELFPASFHLPSGTFYVTVAGTAITGEEQMRESMMEPTTVNGFAYNSYKAVCGDGNAIGDGVVPLEASHLDGAEQLTLENCFHSINAPEEWYGADRFIDQWHKV 354
BLAST of mRNA_C-australica_Contig_98.5.4 vs. uniprot
Match: A0A7S4K5P4_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4K5P4_9STRA) HSP 1 Score: 223 bits (568), Expect = 1.890e-65 Identity = 135/307 (43.97%), Postives = 172/307 (56.03%), Query Frame = 1 Query: 76 GVLKIVMGCLALLRAVEGLVIGHNI---PYVILPGFGNCAQDYVDPFNKGEE-GLVGSLEQRGV-PSFV--LPLKRSDWFKVLRGLGSKDFWEGKAPPTGPAYKWYLDLVKKTVDQARETCGSDRVVLCGHSAGGWLGRAVMGDGTWSE--GKATSDVVAGLVTLGAPHFPPPVETTNDMTRGALTFTSKMYPNCYLSEKGIFYVTVAGTAVEGSEE--------------APRGD--RWRFAFESYKTVAGDGNQIGDGYVPEGSAHLDGAVQISLKDVYHSVDTP------EMWYGSEKVVDRWL 903 G+L I A A G G + P VI PGFGN DYV+P + + GLV +LE+RG P + +P+KR+DW +V GL DF+ G A PTG Y WY+D +KKTVD A E G +RV+L GHSAGGWL RA MGDGTW G T+D V L T+GA H P + + +TRGAL +T YP YLS +GI YV+V G A+ G A RG+ R AF SY++V G G GDG VP L+GA QI L+ V HS++ + WYGSE ++D+WL Sbjct: 20 GILLIGTSAAAAFSATSGA--GSTLSSTPVVICPGFGNDEIDYVEPLKQPRDVGLVSALERRGFDPDLISIIPVKRTDWLRVAGGLLDLDFYTGNAKPTGGGYGWYVDRLKKTVDMAHEESGGERVLLLGHSAGGWLARAAMGDGTWCPEGGIRTADRVRCLATVGAIHRTPE-DASTCVTRGALGYTDSSYPGAYLSGEGIGYVSVGGDAIVGDNAKIAAVETTDADELYAARGEGSASRVAFTSYESVCGQGGVTGDGVVPLDWTRLEGARQIRLEGVVHSINEAGTTIPTDRWYGSEGIIDQWL 323
BLAST of mRNA_C-australica_Contig_98.5.4 vs. uniprot
Match: A0A8J9RBN4_9CHLO (Uncharacterized protein n=1 Tax=Coccomyxa sp. Obi TaxID=2315456 RepID=A0A8J9RBN4_9CHLO) HSP 1 Score: 219 bits (558), Expect = 3.070e-64 Identity = 113/262 (43.13%), Postives = 156/262 (59.54%), Query Frame = 1 Query: 151 PYVILPGFGNCAQDYVDPFNKGEEGLVGSLEQRGVPSFVLPLKRSDWFKVLRGLGSKDFWEGKAPPTGPAYKWYLDLVKKTVDQARETCGSDRVVLCGHSAGGWLGRAVMGDGTWSEGKATSDVV-----AGLVTLGAPHFPPPVETTNDMTRGALTFTSKMYPNCYLSEKGIFYVTVAGTAVEGSEEAPRGDRWRFAFESYKTVAGDGN-QIGDGYVPEGSAHLDGAVQISLKDVYHSVDTPEMW------YGSEKVVDRW 900 P V+LPGFGNC+ DY +P+ + + L +RG +V+ L+R DW KV R + S+++W G P Y+WYL+ +++ VD+AR C SD+V L GHSAGGWLGRA + D + + + V LVTLG PH P P T D T GALT+ + +P + +++G+ YV VAG AV+ + APR R+A SY V GDG+ GD VP +AHL+GA I L+ V+HS+ T + W YGSE VVD W Sbjct: 69 PVVLLPGFGNCSADYENPYGDPSDSMAAILRRRGFKVYVVQLERKDWLKVGRAMISRNYWAGLCT-VDPGYRWYLERIQQAVDKARLECRSDQVHLVGHSAGGWLGRAFVADPLYFDSPVQDEGVPHQGICSLVTLGTPHRPRPAGTGLDTTGGALTWVNLQWPGAHFADRGVEYVCVAGCAVQADKSAPRSSIERYAHSSYSQVCGDGHGHWGDCVVPLANAHLEGADNIVLEGVFHSMGTNKSWQIEHRWYGSEDVVDHW 329 The following BLAST results are available for this feature:
BLAST of mRNA_C-australica_Contig_98.5.4 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-australica_Contig_98.5.4 >prot_C-australica_Contig_98.5.4 ID=prot_C-australica_Contig_98.5.4|Name=mRNA_C-australica_Contig_98.5.4|organism=Chrysoparadoxa australica CS_1217|type=polypeptide|length=284bp MGVLKIVMGCLALLRAVEGLVIGHNIPYVILPGFGNCAQDYVDPFNKGEEback to top mRNA from alignment at C-australica_Contig_98:24372..26906+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-australica_Contig_98.5.4 ID=mRNA_C-australica_Contig_98.5.4|Name=mRNA_C-australica_Contig_98.5.4|organism=Chrysoparadoxa australica CS_1217|type=mRNA|length=2535bp|location=Sequence derived from alignment at C-australica_Contig_98:24372..26906+ (Chrysoparadoxa australica CS_1217)back to top Coding sequence (CDS) from alignment at C-australica_Contig_98:24372..26906+ >mRNA_C-australica_Contig_98.5.4 ID=mRNA_C-australica_Contig_98.5.4|Name=mRNA_C-australica_Contig_98.5.4|organism=Chrysoparadoxa australica CS_1217|type=CDS|length=852bp|location=Sequence derived from alignment at C-australica_Contig_98:24372..26906+ (Chrysoparadoxa australica CS_1217)back to top |