mRNA_C-australica_Contig_98.14.2 (mRNA) Chrysoparadoxa australica CS_1217
You are viewing an mRNA, more information available on the corresponding polypeptide page
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Overview
Homology
BLAST of mRNA_C-australica_Contig_98.14.2 vs. uniprot
Match: A0A836CLR1_9STRA (Tubulin binding cofactor C-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CLR1_9STRA) HSP 1 Score: 241 bits (614), Expect = 1.360e-69 Identity = 110/179 (61.45%), Postives = 135/179 (75.42%), Query Frame = 2 Query: 95 MPFTATDGTVFTDRGAWRKHEFETQYTFKNKTGETLVKSPGKISGQPFDLAGLHECEIQLLDHSEQVQCDEVTKSRVFIAACCEALFVRDCSDCVFVAXXXXXXXXXXXXXXXYLYSKTEPIIETSTGIKFGQFNGAYKEHAAHLKEANLTTPNLWFAVFDFNDDHKTGENWSLMEKEE 631
M FTATDGTVFTDR AWRKHEFETQYTF+N +TL+K PG + GQPFDL+ L CE+QLLD S+ VQCD + RVF+AAC E+LFVR+CS C F A LYSKTEPIIETS+G+KFG FNGAY +HA+HL+ +NL TP++W+A+FDFND+ KTG+NWSL+ + E
Sbjct: 1 MVFTATDGTVFTDRKAWRKHEFETQYTFRNAVDQTLIKLPGAVQGQPFDLSDLSRCEVQLLDASDMVQCDNLVDCRVFVAACAESLFVRNCSGCTFYAACKQLRTRDCQNCLFSLYSKTEPIIETSSGMKFGPFNGAYADHASHLQASNLMTPSVWYAIFDFNDEAKTGKNWSLVGESE 179
BLAST of mRNA_C-australica_Contig_98.14.2 vs. uniprot
Match: A0A7S2K3P5_9STRA (Hypothetical protein n=2 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2K3P5_9STRA) HSP 1 Score: 228 bits (580), Expect = 4.840e-63 Identity = 110/208 (52.88%), Postives = 137/208 (65.87%), Query Frame = 2 Query: 95 MPFTATDGTVFTDRGAWRKHEFETQYTFKNKTGETLVKSPGKISGQPFDLAGLHECEIQLLDHSEQVQCDEVTKSRVFIAACCEALFVRDCSDCVFVAXXXXXXXXXXXXXXXYLYSKTEPIIETSTGIKFGQFNGAYKEHAAHLKEANLTTP-NLWFAVFDFNDDHKTGENWSLMEKEEEAPVWRPLDDGAEVAVPRVKKGSIAVPT 715
M FTATDGT F G +R+HE ETQYT++NK GETL+K PG + GQPFD++ C + LLDHS+QVQ D+V+ SRVFIAA E++F+R+CS C F YLYSKTEP IETS I+F FNGAY H ++ A+L NLWFAV+DFNDD +TG NW + EE P+W PL+DGA+ PRVK G+I T
Sbjct: 1 MMFTATDGTSFFSLGEYRRHEMETQYTWENKMGETLMKLPGSVKGQPFDISSCKGCRLLLLDHSDQVQIDDVSDSRVFIAASSESVFIRNCSSCTFTIACKQFRTRDCTNCIFYLYSKTEPAIETSNNIRFAPFNGAYDGHKQAMEAASLNPERNLWFAVYDFNDDKQTGNNWRYLNASEEDPLWTPLNDGAKTCCPRVKPGAIKTQT 208
BLAST of mRNA_C-australica_Contig_98.14.2 vs. uniprot
Match: D7G8D4_ECTSI (C-CAP/cofactor C-like domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G8D4_ECTSI) HSP 1 Score: 231 bits (589), Expect = 7.020e-58 Identity = 113/208 (54.33%), Postives = 139/208 (66.83%), Query Frame = 2 Query: 107 ATDGTVFTDRGAWRKHEFETQYTFKNKTGETLVKSPGKISGQPFDLAGLHECEIQLLDHSEQVQCDEVTKSRVFIAACCEALFVRDCSDCVFVAXXXXXXXXXXXXXXXYLYSKTEPIIETSTGIKFGQFNGAYKEHAAHLKEANLTTPNLWFAVFDFNDDHKTGENWSLMEKEEEA-PVWRPLDDGAEVAVPRVKKGSIAVPTNSDG 727
A DGT FTDR +RK+ F TQYTFK++ GE L K PG I GQPFDL L CE+ LLD SE VQ DE++ RVFIAAC +++FVR+C+ CVF LY KTEPIIETS G+ F FNGAY HA HL+EA L TPNLWF V+DFND+ KTG+NW L+ +EE+ WRPL+D +EVA+P GS+ +P+ G
Sbjct: 3 APDGTEFTDRAEYRKYLFLTQYTFKDREGEILRKLPGDIDGQPFDLTSLRRCEVALLDRSEAVQVDELSDCRVFIAACVDSVFVRNCTGCVFTVACKQLRTRDCEDCEFRLYCKTEPIIETSHGMTFAPFNGAYVGHAEHLREAGLMTPNLWFGVYDFNDEAKTGDNWRLLAEEEQGGEPWRPLNDNSEVAIPATAPGSVPLPSKRTG 210
BLAST of mRNA_C-australica_Contig_98.14.2 vs. uniprot
Match: A0A8K1CP34_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CP34_PYTOL) HSP 1 Score: 202 bits (515), Expect = 4.160e-54 Identity = 100/183 (54.64%), Postives = 124/183 (67.76%), Query Frame = 2 Query: 101 FTATDGTVFTDRGAWRKHEFETQYTFKNKTGETLVKSPGKISGQPFDLAGLHECEIQLLDHSEQVQCDEVTKSRVFIAACCEALFVRDCSDCVFVAXXXXXXXXXXXXXXXYLYSKTEPIIETSTGIKFGQFNGAYKEHAAHLKEANLT-TPNLWFAVFDFNDDHKTGENWSLMEKEEEAPVW 646
F A+DGT F DR AWR++EFET YTF+N+T ETL+K+PGKISGQPFDL+ L CE+QLLD +QVQ D V SR+FI E++FVR+CS+C+ XXX YLYS T+PIIETS+ IKF FNGAY H K+A L T N W V+DFND K+G NW L++ +EE W
Sbjct: 4 FVASDGTKFEDRNAWRRYEFETNYTFRNRTNETLIKTPGKISGQPFDLSDLENCEVQLLDQIDQVQVDNVNNSRLFIGPSSESVFVRNCSNCIITVACKQLRTRDXXXCTIYLYSLTDPIIETSSDIKFAPFNGAYCGLEQHFKDARLEPTNNHWSQVYDFNDPDKSGHNWRLLKPDEECAPW 186
BLAST of mRNA_C-australica_Contig_98.14.2 vs. uniprot
Match: A0A024GPL0_9STRA (C-CAP/cofactor C-like domain-containing protein n=1 Tax=Albugo candida TaxID=65357 RepID=A0A024GPL0_9STRA) HSP 1 Score: 192 bits (487), Expect = 1.980e-51 Identity = 92/186 (49.46%), Postives = 120/186 (64.52%), Query Frame = 2 Query: 101 FTATDGTVFTDRGAWRKHEFETQYTFKNKTGETLVKSPGKISGQPFDLAGLHECEIQLLDHSEQVQCDEVTKSRVFIAACCEALFVRDCSDCVFVAXXXXXXXXXXXXXXXYLYSKTEPIIETSTGIKFGQFNGAYKEHAAHLKEANLTTP-NLWFAVFDFNDDHKTGENWSLMEKEEEAP-VWRP 652
FTA+DGT F DR WRK+EFET YTF+N+ ETL+K PG I GQPFD++ L C + LLDH++QVQ D V ++VF+ ++F+R+CSDCVF YLYS T PIIETS+ ++F FNG Y++ + EA L NLW V+DFND +KTG NW L+ EEE P +W+P
Sbjct: 4 FTASDGTQFEDRNEWRKYEFETNYTFRNQAQETLIKLPGSICGQPFDVSDLKNCVVMLLDHTDQVQVDHVVATKVFLGPSSSSVFIRNCSDCVFTIACKQLRFRDCINCTVYLYSFTAPIIETSSEMRFAPFNGMYRQLSTQFHEARLDPHCNLWSKVYDFNDPNKTGHNWRLLLTEEEDPDLWKP 189
BLAST of mRNA_C-australica_Contig_98.14.2 vs. uniprot
Match: K3WZP0_GLOUD (C-CAP/cofactor C-like domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WZP0_GLOUD) HSP 1 Score: 196 bits (497), Expect = 3.420e-51 Identity = 93/183 (50.82%), Postives = 119/183 (65.03%), Query Frame = 2 Query: 101 FTATDGTVFTDRGAWRKHEFETQYTFKNKTGETLVKSPGKISGQPFDLAGLHECEIQLLDHSEQVQCDEVTKSRVFIAACCEALFVRDCSDCVFVAXXXXXXXXXXXXXXXYLYSKTEPIIETSTGIKFGQFNGAYKEHAAHLKEANLT-TPNLWFAVFDFNDDHKTGENWSLMEKEEEAPVW 646
FTA+DGT F DR AWRK+EFET YTF++K +TL+K PG+I GQPFDL+ L CE+ LLD +QVQ D ++ RVFI C E++FVR+C++CVF YLYS T+PIIETS ++F FNGAY H +A L T N W V+DFND KTG+NW ++ + EEA W
Sbjct: 4 FTASDGTTFEDRNAWRKYEFETNYTFRDKQAQTLMKVPGQIGGQPFDLSDLDACEVLLLDQCDQVQIDSLSNCRVFIGPCSESVFVRNCTNCVFTVACKQLRTRDSSQCSFYLYSLTDPIIETSKQMQFAPFNGAYNGIERHFADARLEPTNNHWSQVYDFNDPDKTGDNWKILAQNEEAAPW 186
BLAST of mRNA_C-australica_Contig_98.14.2 vs. uniprot
Match: F0WY75_9STRA (Uncharacterized protein AlNc14C373G11135 n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0WY75_9STRA) HSP 1 Score: 191 bits (485), Expect = 3.680e-51 Identity = 89/185 (48.11%), Postives = 122/185 (65.95%), Query Frame = 2 Query: 101 FTATDGTVFTDRGAWRKHEFETQYTFKNKTGETLVKSPGKISGQPFDLAGLHECEIQLLDHSEQVQCDEVTKSRVFIAACCEALFVRDCSDCVFVAXXXXXXXXXXXXXXXYLYSKTEPIIETSTGIKFGQFNGAYKEHAAHLKEANLTTP-NLWFAVFDFNDDHKTGENWSLMEKEEE-APVWR 649
FTA+DGT F DR WRK+EFET YTF+NK ETL+K PG I GQPFD++ L +C + LLDH++QVQ D V +++F+ ++F+R+CSDCVF YLYS T PIIETS+ ++F FNG Y++ + +EA L NLW V+DFND +K+G NW L+ +EEE + +W+
Sbjct: 4 FTASDGTQFKDRNEWRKYEFETNYTFRNKAQETLIKGPGSICGQPFDVSDLKDCVVMLLDHTDQVQVDHVAATKMFLGPSSTSVFIRNCSDCVFTIACKQLRFRDCNNCTVYLYSFTAPIIETSSDMRFAPFNGIYRQLSKQFEEARLDPHCNLWSQVYDFNDPNKSGHNWRLLRQEEEDSDIWK 188
BLAST of mRNA_C-australica_Contig_98.14.2 vs. uniprot
Match: A0A7S2MCN5_9STRA (Hypothetical protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2MCN5_9STRA) HSP 1 Score: 197 bits (500), Expect = 1.530e-50 Identity = 115/230 (50.00%), Postives = 154/230 (66.96%), Query Frame = 2 Query: 101 FTATDGTVFTDRGAWRKHEFETQYTFKNKTGET-----LVKSPGKISGQPFDLAGLHECEIQLLDHSEQVQCDEVTKSRVFIAACCEALFVRDCSDCVFVAXXXXXXXXXXXXXXXYLYSKTEPIIETSTGIKFGQFNGAYKEHAAHLKEANLTTP-NLWFAVFDFNDDHKTGENWSLMEKEEEAPVWRPLDDGAEVAVPRVKKGSIAVPTNSDGEGTQSFGIGAMMQGA 772
FTA+DGT FT +++E + +YTF+ ++GE L + +I GQPF+L L CE+ LLDHSEQ DE+T+ RVFI ACCE++F+R+C DC F XXXXXXXXXXXXXXXYL+S +EP+IE STG+ F FNGAY +HA HL++A L N WF V DFND+ KTG++W +M +E+E +W PL +E+ VPRV+ GS + G SF +G + A
Sbjct: 33 FTASDGTEFTTEKKCKRYEMKIRYTFEGESGEANEMRILRRGSSEIDGQPFELFKLEFCEVLLLDHSEQTTADELTQCRVFIGACCESVFIRNCRDCTFTVXXXXXXXXXXXXXXXYLHSMSEPVIELSTGMVFAPFNGAYPDHAQHLRDAGLEADKNRWFEVHDFNDEKKTGDHWKIMAREDEEGLWTPLG-ASELVVPRVEAGSRSEKGEGGDGGMISFALGTSQEEA 261
BLAST of mRNA_C-australica_Contig_98.14.2 vs. uniprot
Match: A0A7S2VWT6_9STRA (Hypothetical protein (Fragment) n=1 Tax=Triparma pacifica TaxID=91992 RepID=A0A7S2VWT6_9STRA) HSP 1 Score: 193 bits (490), Expect = 3.480e-50 Identity = 118/222 (53.15%), Postives = 138/222 (62.16%), Query Frame = 2 Query: 116 GTVFTDRGAWRKHEFETQYTFKNKTGE-------------TLVKSPGKISGQPFDLAGLHECEIQLLDHSEQVQCDEVTKSRVFIAACCEALFVRDCSDCVFVAXXXXXXXXXXXXXXXYLYSKTEPIIETSTGIKFGQFNGAYKEHAAHLKEANLTTP-NLWFAVFDFNDDHKTGENWSLMEKEEE-APVWRPLDDGAEVAVPRVKKGSIAVPTNS-DGEG 733
G VF+DR WR +EFE YTFKN G T K P I GQPFD+A + +LD+++QVQ D V SR+FIA E++FVRDC DC FV XXXXXXXXYLYSKTEPIIETS+G+ FG FNGA+K H + A L NLWF VFDFND+ KTG NW LME E+E P W PL + E P VKKGSIA+P+ S DG G
Sbjct: 1 GKVFSDRQQWRLYEFELSYTFKNIVGPSPPAAQGTTAVPPTHTKLPNTIDGQPFDIADCTNATLLVLDNTDQVQVDNVKSSRIFIAGSSESVFVRDCVDCTFVVACKQLRTXXXXXXXXYLYSKTEPIIETSSGMAFGPFNGAFKGHKEVMGRAGLIPEHNLWFGVFDFNDEAKTGVNWRLMEDEKEWEPCWCPLGE-FENCCPNVKKGSIALPSQSGDGMG 221
BLAST of mRNA_C-australica_Contig_98.14.2 vs. uniprot
Match: A0A7S2SUK9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SUK9_9STRA) HSP 1 Score: 187 bits (474), Expect = 4.610e-49 Identity = 110/225 (48.89%), Postives = 140/225 (62.22%), Query Frame = 2 Query: 92 PMPFTATDGTVFTDRGAWRKHEFETQYTFKNKTGET-LVKSPGKISGQPFDLAGLHECEIQLLDHSEQVQCDEVTKSRVFIAACCEALFVRDCSDCVFVAXXXXXXXXXXXXXXXYLYSKTEPIIETSTGIKFGQFNGAYKEHAAHLKEANLTTP-NLWFAVFDFNDDHKTGENWSLMEKEEEAPVWRPLDDGAEVAVP-----RVKKGSIAVPTNSDGEGTQSF 745
P FTA+DGT FT R +RK+EF YTF +KTG+ L K PG I GQPFDL L +C + LLD ++Q+Q DE+ RVFI AC E+LFVR+CS+CVF XXXXXXXX LY +EPIIE ST +KF F+G Y E A H+++A L N W VFDFND+ KTG+NWS++ + + W P D AE AVP + + A+ + G G SF
Sbjct: 3 PTTFTASDGTKFTSRAEYRKYEFLLSYTFTSKTGDHGLRKEPGSIDGQPFDLTELKDCTVTLLDKTDQIQADELHNCRVFIGACGESLFVRNCSNCVFFTACKQLRTXXXXXXXXXLYCISEPIIELSTNMKFACFHGGYPEQATHMQQAGLDPRVNKWSMVFDFNDEAKTGKNWSVLRRAQYEDPWFPGGDVAEPAVPLLGPEEAARQAEAIAPSEQGGGMLSF 227 The following BLAST results are available for this feature:
BLAST of mRNA_C-australica_Contig_98.14.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-australica_Contig_98.14.2 >prot_C-australica_Contig_98.14.2 ID=prot_C-australica_Contig_98.14.2|Name=mRNA_C-australica_Contig_98.14.2|organism=Chrysoparadoxa australica CS_1217|type=polypeptide|length=646bp MPFTATDGTVFTDRGAWRKHEFETQYTFKNKTGETLVKSPGKISGQPFDLback to top mRNA from alignment at C-australica_Contig_98:37714..48129- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-australica_Contig_98.14.2 ID=mRNA_C-australica_Contig_98.14.2|Name=mRNA_C-australica_Contig_98.14.2|organism=Chrysoparadoxa australica CS_1217|type=mRNA|length=10416bp|location=Sequence derived from alignment at C-australica_Contig_98:37714..48129- (Chrysoparadoxa australica CS_1217)back to top Coding sequence (CDS) from alignment at C-australica_Contig_98:37714..48129- >mRNA_C-australica_Contig_98.14.2 ID=mRNA_C-australica_Contig_98.14.2|Name=mRNA_C-australica_Contig_98.14.2|organism=Chrysoparadoxa australica CS_1217|type=CDS|length=1938bp|location=Sequence derived from alignment at C-australica_Contig_98:37714..48129- (Chrysoparadoxa australica CS_1217)back to top |