Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Stop | 1 |
| Start | 1 |
| Model size | 648 |
| Hectar predicted targeting category | other localisation |
| Exons | 4 |
| Cds size | 471 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1682588845.4430487-UTR-C-australica_Contig_98:575..584 | 1682588845.4430487-UTR-C-australica_Contig_98:575..584 | Chrysoparadoxa australica CS_1217 | UTR | C-australica_Contig_98 576..584 - |
| 1682588845.4877858-UTR-C-australica_Contig_98:1611..1614 | 1682588845.4877858-UTR-C-australica_Contig_98:1611..1614 | Chrysoparadoxa australica CS_1217 | UTR | C-australica_Contig_98 1612..1614 - |
| 1682588845.4982164-UTR-C-australica_Contig_98:1780..1945 | 1682588845.4982164-UTR-C-australica_Contig_98:1780..1945 | Chrysoparadoxa australica CS_1217 | UTR | C-australica_Contig_98 1781..1945 - |
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1682588845.4547877-CDS-C-australica_Contig_98:584..660 | 1682588845.4547877-CDS-C-australica_Contig_98:584..660 | Chrysoparadoxa australica CS_1217 | CDS | C-australica_Contig_98 585..660 - |
| 1682588845.4663653-CDS-C-australica_Contig_98:978..1098 | 1682588845.4663653-CDS-C-australica_Contig_98:978..1098 | Chrysoparadoxa australica CS_1217 | CDS | C-australica_Contig_98 979..1098 - |
| 1682588845.4769084-CDS-C-australica_Contig_98:1336..1611 | 1682588845.4769084-CDS-C-australica_Contig_98:1336..1611 | Chrysoparadoxa australica CS_1217 | CDS | C-australica_Contig_98 1337..1611 - |
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-australica_Contig_98.1.1 >prot_C-australica_Contig_98.1.1 ID=prot_C-australica_Contig_98.1.1|Name=mRNA_C-australica_Contig_98.1.1|organism=Chrysoparadoxa australica CS_1217|type=polypeptide|length=157bp
MKTQVATAVTTAAVPLPVPEPDSRLLSKSAPNRPSGRARCCDSEGDSDSS
SVSSVNGSVAGAGAGVATSSSGEEWVRSQLQLAAAARVERERIPEGMAPT
DTVTLPGSPPLSNKAGTVSTQKRRVLSQSCLRAKHGFTKFTISSKAQQLL
QQQGES* back to topmRNA from alignment at C-australica_Contig_98:576..1945- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_C-australica_Contig_98.1.1 ID=mRNA_C-australica_Contig_98.1.1|Name=mRNA_C-australica_Contig_98.1.1|organism=Chrysoparadoxa australica CS_1217|type=mRNA|length=1370bp|location=Sequence derived from alignment at C-australica_Contig_98:576..1945- (Chrysoparadoxa australica CS_1217)
GGGAGGGACGGAGGGCGTGAAAGTGACAGAGACATTGTGGCTGATGCCAA
GGGTGCTACCAGTTGCCGTGAAGTTGAAGTTGATGATGAGGAAGAGTCGC
CCTGGGATAAAGCCTTGGCGGAGAGGGACGTGGACCAAGGCGTAGAGTTC
GATGACTACAAAGAGGTGACTATACGGAAAGATGCGTGTGGCCTATGGTG
CACGTGACCTAAAGCAGCACGTGACCTAGCTTGTTTGTGTGGCTTGTTGC
ATAGACCAAGGCATGGCATAGTAGAGCGAGCATGAGGTGAAGCAGGCAAC
CCGCGTCATGCATGCCACGAATTCCCCACAGGATATGAAGACCCAAGTTG
CTACCGCTGTTACGACTGCTGCAGTACCATTACCTGTACCTGAACCAGAC
AGCAGGCTGCTGTCGAAGTCAGCACCAAATAGGCCATCAGGAAGAGCTAG
ATGCTGTGATAGTGAAGGTGACAGTGACTCATCAAGTGTAAGCAGCGTCA
ATGGCAGCGTGGCTGGAGCCGGAGCTGGAGTTGCCACGAGCAGCAGCGGT
GAGGAGTGGGTGAGGTCACAGCTGCAGCTAGCTGCTGCAGCCAGGGTGGA
GAGAGAAAGGTGAGTGCTGACAGTTCAGCTCTGCCAAGAGGCTCAGCACC
CTGCAACGACACCTGTCAACCACTGCCTGTCATGATCAAGGCCTCGTTGG
AAACGTTCGGCCCCTTCAAGTACTCGAGGGCATTCTCTTTCACCGATGGC
TACTTGAGTACCCAGAGCCCTGCAAGCTGCTGCTGCGGCCTCGCCAACCT
ACCCATTTACTAATAGTCTGCCTGTTATCCTCCACCTTGTCAACCAGAAT
TCCTGAGGGAATGGCTCCCACTGATACGGTGACCCTGCCAGGAAGCCCCC
CCCTCAGCAACAAGGCAGGCACAGTGAGCACCCAGAAGAGGAGGGTGCTC
TCGCAGTCATGCCTAAGGTATGGCGCTGCCTTGTTTTGAGTACTGTAAGC
CTGACGAGACTGAGAGGGGTGAGGCCTGCAGCATTAGGGGTCAGTCGTGA
GTGAGCTGTTAGGAGTGGCAGAGCGAGAGGTAACATTAGAGCACTGTGAG
ATCAGGTTGGTTGGCTTGGGTGGGACTTTGGTACCCACCCAGTGGCATTC
AACAGAGAGTCGTACAGGTAGCATACTGGTAGGTAAGGTATCTAATCCAA
GGCAGGGAAGTCTGGAGAACTTTTAGGCTCACCCACACTGAGCATTAATG
CCCTTGGCTAAAATCACTTCCTCCGCTTCCTCTAGGGCAAAACATGGCTT
CACTAAATTCACTATCTCCAGTAAGGCCCAGCAGCTGCTCCAGCAGCAGG
GGGAGAGCTAGATCCAGGGT back to topCoding sequence (CDS) from alignment at C-australica_Contig_98:576..1945- >mRNA_C-australica_Contig_98.1.1 ID=mRNA_C-australica_Contig_98.1.1|Name=mRNA_C-australica_Contig_98.1.1|organism=Chrysoparadoxa australica CS_1217|type=CDS|length=471bp|location=Sequence derived from alignment at C-australica_Contig_98:576..1945- (Chrysoparadoxa australica CS_1217)
ATGAAGACCCAAGTTGCTACCGCTGTTACGACTGCTGCAGTACCATTACC
TGTACCTGAACCAGACAGCAGGCTGCTGTCGAAGTCAGCACCAAATAGGC
CATCAGGAAGAGCTAGATGCTGTGATAGTGAAGGTGACAGTGACTCATCA
AGTGTAAGCAGCGTCAATGGCAGCGTGGCTGGAGCCGGAGCTGGAGTTGC
CACGAGCAGCAGCGGTGAGGAGTGGGTGAGGTCACAGCTGCAGCTAGCTG
CTGCAGCCAGGGTGGAGAGAGAAAGAATTCCTGAGGGAATGGCTCCCACT
GATACGGTGACCCTGCCAGGAAGCCCCCCCCTCAGCAACAAGGCAGGCAC
AGTGAGCACCCAGAAGAGGAGGGTGCTCTCGCAGTCATGCCTAAGGGCAA
AACATGGCTTCACTAAATTCACTATCTCCAGTAAGGCCCAGCAGCTGCTC
CAGCAGCAGGGGGAGAGCTAG back to top
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