Homology
BLAST of mRNA_C-australica_Contig_9779.1.1 vs. uniprot
Match:
A0A4Y9R2C8_9BACT (Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B n=2 Tax=Cyclobacteriaceae TaxID=563798 RepID=A0A4Y9R2C8_9BACT)
HSP 1 Score: 394 bits (1013), Expect = 4.470e-133
Identity = 196/285 (68.77%), Postives = 230/285 (80.70%), Query Frame = 1
Query: 1 IHVISLGHPGVMPLLNKKAVEYAVMMGISTGCDITRFGFFDRKNYFYPDLPKGYQITQDKTPICTNGALEVELKDGTLINVLINRIHLEEDAGKLIHLVGENDSLVDLNRAGVPLIEIVTEPCIHSSKAASAFLTEIRKIVRYLHICDGNMEEGSLRCDANVSVMLKDADELGKKVEVKNMNSIKNVAKAIEHEVERQIELLEDGTEIISETRTYDVSSGKTSGMRTKEELNDYRYFPEPDLSPLEISDEWLAAIKSKISILPNDLTIELESKYGLGPEDASQLT 855
I VI+LGHPG +P +NKKA+EYAV MG++ C+ITR F RKNYFYPDLPKGYQITQDK PIC G + + L DG+ + +NRIHLEEDAGK IHL GE D+LVD NRAG PLIEIVTEP I++S+ A AFLTEI+K+V+YL ICDGNMEEGSLRCDANVSVMLK A ELGKKVEVKNMNS +NV +AIEHE ER + +LE+G EIISETRT+D ++G TSGMRTKEELNDYRYFPEPDLSP+ IS+EWL +I+S + LP DL + +YGL DAS LT
Sbjct: 44 ISVITLGHPGTLPKVNKKAIEYAVKMGLACHCEITRTNIFSRKNYFYPDLPKGYQITQDKGPICVGGKVPIRLADGSTREIQLNRIHLEEDAGKSIHLDGEPDTLVDFNRAGTPLIEIVTEPNIYTSEEAYAFLTEIKKLVKYLDICDGNMEEGSLRCDANVSVMLKGAKELGKKVEVKNMNSFRNVVRAIEHEFERMVGMLEEGKEIISETRTFDANTGTTSGMRTKEELNDYRYFPEPDLSPVVISEEWLQSIQSAMPTLPRDLYKKFTEEYGLPDYDASFLT 328
BLAST of mRNA_C-australica_Contig_9779.1.1 vs. uniprot
Match:
A0A2E8MYA6_9RICK (Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B n=3 Tax=Bacteria TaxID=2 RepID=A0A2E8MYA6_9RICK)
HSP 1 Score: 393 bits (1010), Expect = 1.270e-132
Identity = 191/285 (67.02%), Postives = 230/285 (80.70%), Query Frame = 1
Query: 1 IHVISLGHPGVMPLLNKKAVEYAVMMGISTGCDITRFGFFDRKNYFYPDLPKGYQITQDKTPICTNGALEVELKDGTLINVLINRIHLEEDAGKLIHLVGENDSLVDLNRAGVPLIEIVTEPCIHSSKAASAFLTEIRKIVRYLHICDGNMEEGSLRCDANVSVMLKDADELGKKVEVKNMNSIKNVAKAIEHEVERQIELLEDGTEIISETRTYDVSSGKTSGMRTKEELNDYRYFPEPDLSPLEISDEWLAAIKSKISILPNDLTIELESKYGLGPEDASQLT 855
+ VISLGHPGVMP LNKKAVEYA+ MG++ C I+ + FFDRKNYFYPDLPKGYQ+TQDKTPIC G + V D +++NRIHLEEDAGK IH+ G+ +SL+DLNRAGVPLIEIVTEP IHS++ A AFL E+R+IVRYL ICDGNMEEGSLRCDANVSV LK A ELGKKVE+KNMNSIK+V +AIEHE ERQI+L+EDG EI+SETRT+D+++G++SGMRTKEELNDYRYFPEPDLSP+ +++ WL I LP++ + + YGL DA LT
Sbjct: 44 VSVISLGHPGVMPKLNKKAVEYAIRMGLACDCKISEYQFFDRKNYFYPDLPKGYQVTQDKTPICVGGKVPVYYGDNIHSEIILNRIHLEEDAGKSIHVEGQKNSLIDLNRAGVPLIEIVTEPVIHSAEEAGAFLGEVRRIVRYLGICDGNMEEGSLRCDANVSVKLKGAKELGKKVELKNMNSIKSVIRAIEHETERQIDLIEDGEEILSETRTFDINTGRSSGMRTKEELNDYRYFPEPDLSPIHVTEAWLHEIADTQPTLPSEFRRKFQEDYGLSLYDAEVLT 328
BLAST of mRNA_C-australica_Contig_9779.1.1 vs. uniprot
Match:
A0A3D9KZ95_MARFU (Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B n=1 Tax=Marinoscillum furvescens DSM 4134 TaxID=1122208 RepID=A0A3D9KZ95_MARFU)
HSP 1 Score: 388 bits (997), Expect = 1.260e-130
Identity = 191/285 (67.02%), Postives = 228/285 (80.00%), Query Frame = 1
Query: 1 IHVISLGHPGVMPLLNKKAVEYAVMMGISTGCDITRFGFFDRKNYFYPDLPKGYQITQDKTPICTNGALEVELKDGTLINVLINRIHLEEDAGKLIHLVGENDSLVDLNRAGVPLIEIVTEPCIHSSKAASAFLTEIRKIVRYLHICDGNMEEGSLRCDANVSVMLKDADELGKKVEVKNMNSIKNVAKAIEHEVERQIELLEDGTEIISETRTYDVSSGKTSGMRTKEELNDYRYFPEPDLSPLEISDEWLAAIKSKISILPNDLTIELESKYGLGPEDASQLT 855
+ VISLGHPGVMP LN+KAVEYAV MG++ C+IT + +FDRKNYFYPDLPKGYQITQDKTPIC G + V + V +NRIHLEEDAGK IHL GE DSL+DLNRAGVPLIEIVTEP IHS + A AF+ E+R+IVRYL ICDGNMEEGSLRCDANVS+M DA ELG+KVE+KNMNSIK+V +AI HE++RQI + E+G EIISETRTYDV++G ++GMRTKEELNDYRYFPEPDLSPL I+ +WL +++S + +LP + YGL DA +T
Sbjct: 44 VSVISLGHPGVMPKLNEKAVEYAVRMGLACNCEITEYQYFDRKNYFYPDLPKGYQITQDKTPICVGGEVPVVYDETKHSTVKLNRIHLEEDAGKSIHLEGEPDSLIDLNRAGVPLIEIVTEPVIHSPEEAGAFVAEVRRIVRYLGICDGNMEEGSLRCDANVSIMPVDATELGRKVELKNMNSIKHVIRAIYHEMDRQIRMTENGEEIISETRTYDVATGDSTGMRTKEELNDYRYFPEPDLSPLHITKDWLESVRSAMPMLPAGFREKFRKSYGLSEYDAQVIT 328
BLAST of mRNA_C-australica_Contig_9779.1.1 vs. uniprot
Match:
UPI0018076ACC (Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatB n=1 Tax=Algoriphagus sp. TaxID=1872435 RepID=UPI0018076ACC)
HSP 1 Score: 387 bits (994), Expect = 3.360e-130
Identity = 191/285 (67.02%), Postives = 228/285 (80.00%), Query Frame = 1
Query: 1 IHVISLGHPGVMPLLNKKAVEYAVMMGISTGCDITRFGFFDRKNYFYPDLPKGYQITQDKTPICTNGALEVELKDGTLINVLINRIHLEEDAGKLIHLVGENDSLVDLNRAGVPLIEIVTEPCIHSSKAASAFLTEIRKIVRYLHICDGNMEEGSLRCDANVSVMLKDADELGKKVEVKNMNSIKNVAKAIEHEVERQIELLEDGTEIISETRTYDVSSGKTSGMRTKEELNDYRYFPEPDLSPLEISDEWLAAIKSKISILPNDLTIELESKYGLGPEDASQLT 855
I I+LGHPG +P +NKKA+EYAV MG++ +ITR+ F RKNYFYPDLPKGYQITQDK PIC G + + L DG+ ++ +NRIHLEEDAGK IHL GE D+LVD NRAG PLIEIVTEP I+SS+ A AFL+EI+K+V+YL ICDGNMEEGSLRCDAN+SVMLK A ELGKKVEVKNMNS +NV +AIEHE ER + LLE+G EIISETRT+D +G T+GMRTKEELNDYRYFPEPDLSP+ IS+EWL +I+ + LP DL + +YGL DA+ LT
Sbjct: 44 ISTITLGHPGTLPKVNKKAIEYAVKMGLACHSEITRYNIFSRKNYFYPDLPKGYQITQDKGPICVGGIVPIRLSDGSAKDIQLNRIHLEEDAGKSIHLEGEADTLVDFNRAGTPLIEIVTEPAIYSSEEAYAFLSEIKKLVKYLDICDGNMEEGSLRCDANISVMLKGAKELGKKVEVKNMNSFRNVVRAIEHEFERMVTLLENGKEIISETRTFDADTGTTAGMRTKEELNDYRYFPEPDLSPVLISEEWLHSIQVDMPALPRDLYKKFVEEYGLPDYDAAFLT 328
BLAST of mRNA_C-australica_Contig_9779.1.1 vs. uniprot
Match:
A0A1I5CH64_9BACT (Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B n=4 Tax=Algoriphagus TaxID=246875 RepID=A0A1I5CH64_9BACT)
HSP 1 Score: 386 bits (992), Expect = 6.760e-130
Identity = 190/285 (66.67%), Postives = 227/285 (79.65%), Query Frame = 1
Query: 1 IHVISLGHPGVMPLLNKKAVEYAVMMGISTGCDITRFGFFDRKNYFYPDLPKGYQITQDKTPICTNGALEVELKDGTLINVLINRIHLEEDAGKLIHLVGENDSLVDLNRAGVPLIEIVTEPCIHSSKAASAFLTEIRKIVRYLHICDGNMEEGSLRCDANVSVMLKDADELGKKVEVKNMNSIKNVAKAIEHEVERQIELLEDGTEIISETRTYDVSSGKTSGMRTKEELNDYRYFPEPDLSPLEISDEWLAAIKSKISILPNDLTIELESKYGLGPEDASQLT 855
I VI+LGHPG +P +NKK VEYAV MG++ +ITRF F RKNYFYPDLPKGYQITQDK PIC G + ++L DGT ++ +NR+H+EEDAGK IHL GE D+ VD NRAG PLIEIV+EP +HS + A AFLTEI+K+V YL ICDGNMEEGSLRCDANVSVMLK A ELGKKVEVKNMNS +NV +AIEHE ER I LLE+G EI+SETRT+D +SG T+ MRTKE+LNDYRYFPEPDLSP+ IS+EWL++I+ ++ LP +L + YGL DAS LT
Sbjct: 44 ISVITLGHPGTLPKINKKVVEYAVKMGLACNSEITRFNIFSRKNYFYPDLPKGYQITQDKGPICVGGTVPIQLSDGTKRDIRLNRVHMEEDAGKSIHLAGETDTFVDFNRAGTPLIEIVSEPDMHSPEEAYAFLTEIKKLVEYLEICDGNMEEGSLRCDANVSVMLKGAKELGKKVEVKNMNSFRNVFRAIEHEHERIIGLLEEGKEIVSETRTFDANSGTTASMRTKEDLNDYRYFPEPDLSPVVISEEWLSSIQEQMPELPRELQSRFVNDYGLPDYDASFLT 328
BLAST of mRNA_C-australica_Contig_9779.1.1 vs. uniprot
Match:
UPI001F2AD4AB (Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatB n=2 Tax=Fulvivirga TaxID=396811 RepID=UPI001F2AD4AB)
HSP 1 Score: 385 bits (989), Expect = 1.860e-129
Identity = 188/285 (65.96%), Postives = 229/285 (80.35%), Query Frame = 1
Query: 1 IHVISLGHPGVMPLLNKKAVEYAVMMGISTGCDITRFGFFDRKNYFYPDLPKGYQITQDKTPICTNGALEVELKDGTLINVLINRIHLEEDAGKLIHLVGENDSLVDLNRAGVPLIEIVTEPCIHSSKAASAFLTEIRKIVRYLHICDGNMEEGSLRCDANVSVMLKDADELGKKVEVKNMNSIKNVAKAIEHEVERQIELLEDGTEIISETRTYDVSSGKTSGMRTKEELNDYRYFPEPDLSPLEISDEWLAAIKSKISILPNDLTIELESKYGLGPEDASQLT 855
+ VI+LGHPG +P LNKK VEYA+ MG++ CDI+R FDRKNYFYPDLPKGYQ+TQD+TPIC NG + V K+G ++++NRIH+EEDAGK IHL E DSLVD NRAGVPLIEIVTEP I SS+ A++FLTEIRK+VRYL ICDGNMEEGSLRCDAN+SVM K + LGKKVEVKNMNSI+NV +AI+HE+ERQI +E+G I SETRT+D ++G T+GMRTKEELNDYRYFP+PDLSPL +S+EWL I++ + LPN+L + +Y L DA LT
Sbjct: 44 VSVITLGHPGTLPKLNKKVVEYAIKMGLACNCDISREQIFDRKNYFYPDLPKGYQLTQDRTPICMNGHVTVFPKNGESRDIVLNRIHIEEDAGKSIHLAEETDSLVDFNRAGVPLIEIVTEPAIRSSEEANSFLTEIRKLVRYLDICDGNMEEGSLRCDANISVMPKGSSTLGKKVEVKNMNSIRNVQRAIDHEIERQIAEIENGNAIFSETRTFDAATGTTAGMRTKEELNDYRYFPDPDLSPLIVSEEWLKEIEASMPSLPNELLAKYVKEYSLPEYDAQVLT 328
BLAST of mRNA_C-australica_Contig_9779.1.1 vs. uniprot
Match:
UPI00040A0066 (Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatB n=1 Tax=Adhaeribacter aquaticus TaxID=299567 RepID=UPI00040A0066)
HSP 1 Score: 385 bits (989), Expect = 1.920e-129
Identity = 186/285 (65.26%), Postives = 230/285 (80.70%), Query Frame = 1
Query: 1 IHVISLGHPGVMPLLNKKAVEYAVMMGISTGCDITRFGFFDRKNYFYPDLPKGYQITQDKTPICTNGALEVELKDGTLINVLINRIHLEEDAGKLIHLVGENDSLVDLNRAGVPLIEIVTEPCIHSSKAASAFLTEIRKIVRYLHICDGNMEEGSLRCDANVSVMLKDADELGKKVEVKNMNSIKNVAKAIEHEVERQIELLEDGTEIISETRTYDVSSGKTSGMRTKEELNDYRYFPEPDLSPLEISDEWLAAIKSKISILPNDLTIELESKYGLGPEDASQLT 855
I I+LGHPG +P +NKKAV+YA+ MG++T C ITR +FDRKNYFYPDLPKGYQITQDKTPIC G ++++L +G + +NRIH+EEDAGK +HL GE ++L+DLNRAGVPLIEIV+EP IH+S+ A +FLTEI+K+VRYL ICDGNMEEGSLRCDANVSVMLK A++ G KVEVKNMNS +NV +AI+HE+ERQI LLE G I SETR +D ++G TSG R+KE LNDYRYFPEPDL+P+ ISDEWL IKS++ LP++L +YGL DA+ LT
Sbjct: 43 ISAITLGHPGTLPKMNKKAVDYAIKMGLATNCSITRHNYFDRKNYFYPDLPKGYQITQDKTPICKKGHVDIQLSNGQEKTIRLNRIHMEEDAGKSMHLAGETETLIDLNRAGVPLIEIVSEPDIHNSEEAYSFLTEIKKLVRYLDICDGNMEEGSLRCDANVSVMLKGAEKFGVKVEVKNMNSFRNVQRAIDHEIERQIALLEAGETIESETRGFDANTGTTSGQRSKETLNDYRYFPEPDLTPMVISDEWLERIKSEMPSLPHELYARFTKEYGLPEYDANVLT 327
BLAST of mRNA_C-australica_Contig_9779.1.1 vs. uniprot
Match:
L8K1L0_9BACT (Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B n=1 Tax=Fulvivirga imtechensis AK7 TaxID=1237149 RepID=L8K1L0_9BACT)
HSP 1 Score: 385 bits (988), Expect = 2.640e-129
Identity = 191/285 (67.02%), Postives = 225/285 (78.95%), Query Frame = 1
Query: 1 IHVISLGHPGVMPLLNKKAVEYAVMMGISTGCDITRFGFFDRKNYFYPDLPKGYQITQDKTPICTNGALEVELKDGTLINVLINRIHLEEDAGKLIHLVGENDSLVDLNRAGVPLIEIVTEPCIHSSKAASAFLTEIRKIVRYLHICDGNMEEGSLRCDANVSVMLKDADELGKKVEVKNMNSIKNVAKAIEHEVERQIELLEDGTEIISETRTYDVSSGKTSGMRTKEELNDYRYFPEPDLSPLEISDEWLAAIKSKISILPNDLTIELESKYGLGPEDASQLT 855
+ VI+LGHPG +P LNKK VEYA+ MG++ CDI+R FDRKNYFYPDLPKGYQITQD+TPIC G + V KDG N+ +NRIH+EEDAGK IHL E D+LVD NRAGVPLIEIVTEP I +S A AFLTE+R++VRYL ICDGNMEEGSLRCDAN+SVMLKDA E GKKVEVKNMNSI+NV +AI+HE+ERQI +E G I SETRT+D ++G TSGMRTKEELNDYRYFP+PDLSPL +S+EWL AI+ + LP +L + +Y L DA LT
Sbjct: 43 VSVITLGHPGTLPKLNKKVVEYAIKMGLACNCDISRTQIFDRKNYFYPDLPKGYQITQDRTPICRKGYVAVSPKDGEQRNIGLNRIHIEEDAGKSIHLPEEADTLVDFNRAGVPLIEIVTEPEIRTSDEAYAFLTEVRRLVRYLEICDGNMEEGSLRCDANISVMLKDAKEFGKKVEVKNMNSIRNVQRAIDHEIERQIMEIEKGNVIFSETRTFDANTGTTSGMRTKEELNDYRYFPDPDLSPLHVSEEWLKAIEESMPSLPRELFEKYVREYDLPEYDAQVLT 327
BLAST of mRNA_C-australica_Contig_9779.1.1 vs. uniprot
Match:
A0A654DWW1_9BACT (Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B n=1 Tax=Marinoscillum sp. 108 TaxID=2653151 RepID=A0A654DWW1_9BACT)
HSP 1 Score: 383 bits (983), Expect = 1.660e-128
Identity = 190/285 (66.67%), Postives = 226/285 (79.30%), Query Frame = 1
Query: 1 IHVISLGHPGVMPLLNKKAVEYAVMMGISTGCDITRFGFFDRKNYFYPDLPKGYQITQDKTPICTNGALEVELKDGTLINVLINRIHLEEDAGKLIHLVGENDSLVDLNRAGVPLIEIVTEPCIHSSKAASAFLTEIRKIVRYLHICDGNMEEGSLRCDANVSVMLKDADELGKKVEVKNMNSIKNVAKAIEHEVERQIELLEDGTEIISETRTYDVSSGKTSGMRTKEELNDYRYFPEPDLSPLEISDEWLAAIKSKISILPNDLTIELESKYGLGPEDASQLT 855
+ ISLGHPGVMP LN KAVEYA+ MG++ I+ + FFDRKNYFYPDLPKGYQITQDKTPIC G++ V V++NRIHLEEDAGK IHL GE D+L+DLNRAGVPLIEIVTEP I + + A AFLTE+RK+VRYL ICDGNMEEGS+RCDANVSVM +LGKKVEVKNMNSIKNV +AI HE++RQI LLE G EIISETRT+D ++G +SGMRTKEELNDYRYFPEPDLSPL ++ +WL I++++ +LP+D + E +YGL DA LT
Sbjct: 44 VSTISLGHPGVMPKLNIKAVEYAIKMGLACKSKISEYQFFDRKNYFYPDLPKGYQITQDKTPICIGGSVPVVYDGNQHSEVVLNRIHLEEDAGKSIHLEGETDTLIDLNRAGVPLIEIVTEPVIKTPEEAGAFLTEVRKLVRYLGICDGNMEEGSVRCDANVSVMRTTDTQLGKKVEVKNMNSIKNVVRAIYHEMDRQIALLEAGEEIISETRTFDANTGDSSGMRTKEELNDYRYFPEPDLSPLRVTSDWLEKIRAEMPLLPSDFKSKFEKEYGLSESDALVLT 328
BLAST of mRNA_C-australica_Contig_9779.1.1 vs. uniprot
Match:
A0A098LEY4_9BACT (Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B n=3 Tax=Sporocytophaga TaxID=1011 RepID=A0A098LEY4_9BACT)
HSP 1 Score: 382 bits (980), Expect = 4.420e-128
Identity = 186/285 (65.26%), Postives = 225/285 (78.95%), Query Frame = 1
Query: 1 IHVISLGHPGVMPLLNKKAVEYAVMMGISTGCDITRFGFFDRKNYFYPDLPKGYQITQDKTPICTNGALEVELKDGTLINVLINRIHLEEDAGKLIHLVGENDSLVDLNRAGVPLIEIVTEPCIHSSKAASAFLTEIRKIVRYLHICDGNMEEGSLRCDANVSVMLKDADELGKKVEVKNMNSIKNVAKAIEHEVERQIELLEDGTEIISETRTYDVSSGKTSGMRTKEELNDYRYFPEPDLSPLEISDEWLAAIKSKISILPNDLTIELESKYGLGPEDASQLT 855
+ VI+L HPG +PLLNKK VEYA+ MG+++GC+I R FFDRKNYFYPDLPKGYQ TQDK PIC G + + +K+G + + +NRIH+E+DAGK +HL GE D+LVD NRAGVPLIEIVTEP I SS+ A +TEIRK+VRYL +CDGNMEEGS+RCDANVSVMLK A + GKKVE+KNMNSI+NV +AI+HE+ERQIEL+E G I SETR +D ++G T GMRTKEELNDYRYFPEPDL PL ISD WLA IK+ + LPN L + ++GL DA LT
Sbjct: 43 VSVITLAHPGTLPLLNKKVVEYAIKMGLASGCEINRVNFFDRKNYFYPDLPKGYQTTQDKAPICKGGEVVIRMKEGEKV-IRLNRIHMEDDAGKNLHLAGETDTLVDYNRAGVPLIEIVTEPDIRSSEEAFQVVTEIRKLVRYLEVCDGNMEEGSMRCDANVSVMLKGATQYGKKVEIKNMNSIRNVQRAIDHEIERQIELIEKGEAIFSETRMFDATTGSTYGMRTKEELNDYRYFPEPDLQPLHISDTWLADIKATMPSLPNFLYKKFTEEFGLPQYDAQVLT 326
The following BLAST results are available for this feature:
BLAST of mRNA_C-australica_Contig_9779.1.1 vs. uniprot
Analysis Date: 2022-09-19 (
Diamond blastx: OGS1.0 vs UniRef90 )
Total hits: 25
0 1 Expect = 4.47e-133 / Id = 68.77 Expect = 1.27e-132 / Id = 67.02 Expect = 1.26e-130 / Id = 67.02 Expect = 3.36e-130 / Id = 67.02 Expect = 6.76e-130 / Id = 66.67 Expect = 1.86e-129 / Id = 65.96 Expect = 1.92e-129 / Id = 65.26 Expect = 2.64e-129 / Id = 67.02 Expect = 1.66e-128 / Id = 66.67 Expect = 4.42e-128 / Id = 65.26 Sequence A0A4Y9R2C8_9BACT A0A2E8MYA6_9RICK A0A3D9KZ95_MARFU UPI0018076ACC A0A1I5CH64_9BACT UPI001F2AD4AB UPI00040A0066 L8K1L0_9BACT A0A654DWW1_9BACT A0A098LEY4_9BACT
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Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-australica_Contig_9779.1.1
>prot_C-australica_Contig_9779.1.1 ID=prot_C-australica_Contig_9779.1.1|Name=mRNA_C-australica_Contig_9779.1.1|organism=Chrysoparadoxa australica CS_1217|type=polypeptide|length=285bp
IHVISLGHPGVMPLLNKKAVEYAVMMGISTGCDITRFGFFDRKNYFYPDL PKGYQITQDKTPICTNGALEVELKDGTLINVLINRIHLEEDAGKLIHLVG ENDSLVDLNRAGVPLIEIVTEPCIHSSKAASAFLTEIRKIVRYLHICDGN MEEGSLRCDANVSVMLKDADELGKKVEVKNMNSIKNVAKAIEHEVERQIE LLEDGTEIISETRTYDVSSGKTSGMRTKEELNDYRYFPEPDLSPLEISDE WLAAIKSKISILPNDLTIELESKYGLGPEDASQLT back to top mRNA from alignment at C-australica_Contig_9779:2..856-
Legend: CDS polypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_C-australica_Contig_9779.1.1 ID=mRNA_C-australica_Contig_9779.1.1|Name=mRNA_C-australica_Contig_9779.1.1|organism=Chrysoparadoxa australica CS_1217|type=mRNA|length=855bp|location=Sequence derived from alignment at C-australica_Contig_9779:2..856- (Chrysoparadoxa australica CS_1217)ATTCATGTCATTTCATTGGGTCATCCTGGGGTGATGCCACTGCTCAACAA
GAAAGCAGTAGAATATGCTGTGATGATGGGAATATCAACAGGCTGTGATA
TTACAAGGTTTGGCTTTTTTGATCGCAAGAATTATTTTTATCCTGATCTC
CCTAAAGGGTATCAGATTACTCAGGACAAAACACCAATATGTACCAATGG
TGCTTTAGAAGTTGAATTGAAGGATGGTACCCTTATTAATGTATTGATCA
ACAGGATTCACCTGGAAGAAGATGCGGGTAAATTGATCCATTTGGTAGGC
GAGAACGATTCGCTTGTTGACTTGAATCGGGCAGGAGTTCCCCTGATTGA
AATTGTGACCGAACCATGCATTCATTCTTCAAAAGCAGCCAGTGCTTTTC
TAACAGAGATCAGAAAAATCGTTAGGTATCTTCATATTTGTGATGGAAAC
ATGGAAGAAGGGTCATTGAGATGTGATGCCAATGTTTCTGTAATGTTGAA
AGATGCAGATGAGCTTGGGAAGAAAGTGGAAGTTAAAAACATGAACTCCA
TTAAAAATGTGGCCAAGGCCATAGAACATGAAGTAGAAAGGCAAATTGAG
TTGTTGGAGGATGGCACCGAGATTATTTCTGAAACCCGTACCTATGATGT
GTCCTCTGGTAAGACCTCAGGTATGCGAACCAAGGAGGAGCTCAATGACT
ATCGTTATTTTCCAGAGCCGGATTTAAGTCCATTAGAGATTAGTGATGAA
TGGCTGGCAGCCATTAAGAGTAAAATATCTATCCTTCCGAATGATTTAAC
AATTGAGTTGGAAAGTAAATATGGCCTAGGTCCGGAAGATGCTTCTCAGC
TTACG back to top Coding sequence (CDS) from alignment at C-australica_Contig_9779:2..856-
>mRNA_C-australica_Contig_9779.1.1 ID=mRNA_C-australica_Contig_9779.1.1|Name=mRNA_C-australica_Contig_9779.1.1|organism=Chrysoparadoxa australica CS_1217|type=CDS|length=855bp|location=Sequence derived from alignment at C-australica_Contig_9779:2..856- (Chrysoparadoxa australica CS_1217) ATTCATGTCATTTCATTGGGTCATCCTGGGGTGATGCCACTGCTCAACAA GAAAGCAGTAGAATATGCTGTGATGATGGGAATATCAACAGGCTGTGATA TTACAAGGTTTGGCTTTTTTGATCGCAAGAATTATTTTTATCCTGATCTC CCTAAAGGGTATCAGATTACTCAGGACAAAACACCAATATGTACCAATGG TGCTTTAGAAGTTGAATTGAAGGATGGTACCCTTATTAATGTATTGATCA ACAGGATTCACCTGGAAGAAGATGCGGGTAAATTGATCCATTTGGTAGGC GAGAACGATTCGCTTGTTGACTTGAATCGGGCAGGAGTTCCCCTGATTGA AATTGTGACCGAACCATGCATTCATTCTTCAAAAGCAGCCAGTGCTTTTC TAACAGAGATCAGAAAAATCGTTAGGTATCTTCATATTTGTGATGGAAAC ATGGAAGAAGGGTCATTGAGATGTGATGCCAATGTTTCTGTAATGTTGAA AGATGCAGATGAGCTTGGGAAGAAAGTGGAAGTTAAAAACATGAACTCCA TTAAAAATGTGGCCAAGGCCATAGAACATGAAGTAGAAAGGCAAATTGAG TTGTTGGAGGATGGCACCGAGATTATTTCTGAAACCCGTACCTATGATGT GTCCTCTGGTAAGACCTCAGGTATGCGAACCAAGGAGGAGCTCAATGACT ATCGTTATTTTCCAGAGCCGGATTTAAGTCCATTAGAGATTAGTGATGAA TGGCTGGCAGCCATTAAGAGTAAAATATCTATCCTTCCGAATGATTTAAC AATTGAGTTGGAAAGTAAATATGGCCTAGGTCCGGAAGATGCTTCTCAGC TTACG back to top