Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Stop | 0 |
| Start | 1 |
| Model size | 855 |
| Hectar predicted targeting category | signal peptide |
| Exons | 4 |
| Cds size | 855 |
Relationships
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1682588842.9215155-CDS-C-australica_Contig_977:9871..10153 | 1682588842.9215155-CDS-C-australica_Contig_977:9871..10153 | Chrysoparadoxa australica CS_1217 | CDS | C-australica_Contig_977 9872..10153 - |
| 1682588842.9315524-CDS-C-australica_Contig_977:10338..10388 | 1682588842.9315524-CDS-C-australica_Contig_977:10338..10388 | Chrysoparadoxa australica CS_1217 | CDS | C-australica_Contig_977 10339..10388 - |
| 1682588842.941449-CDS-C-australica_Contig_977:10818..10911 | 1682588842.941449-CDS-C-australica_Contig_977:10818..10911 | Chrysoparadoxa australica CS_1217 | CDS | C-australica_Contig_977 10819..10911 - |
| 1682588842.9560642-CDS-C-australica_Contig_977:11025..11455 | 1682588842.9560642-CDS-C-australica_Contig_977:11025..11455 | Chrysoparadoxa australica CS_1217 | CDS | C-australica_Contig_977 11026..11455 - |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-australica_Contig_977.5.1 >prot_C-australica_Contig_977.5.1 ID=prot_C-australica_Contig_977.5.1|Name=mRNA_C-australica_Contig_977.5.1|organism=Chrysoparadoxa australica CS_1217|type=polypeptide|length=285bp
MYTVRTYVLSCTYLLPLAVKATHLLYAAVSSLLLHGSWAPSLAMDRSLFK
AAANQRARAGSSTKPKYRGKSKAELLALLKAKQAAQEQEKAAPVSPSGSS
KPVQPAQPAQPTQAASLPVGFFDQDENGGIQAESSPATQQMQQAWQEQGL
EQEGGTISAEGTLPADFFDAPTKSAPQAPKEKRKKLTPEQQADWGEFQTF
AAKVNKDEAEEEVGDEAIEMDTKLQVSCLLSIRLNKGVCSAFGTFAPHAI
YCVVSPTSSCHVLLECLFQEEREQLEQLTYMGRFA back to topmRNA from alignment at C-australica_Contig_977:9872..11455- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_C-australica_Contig_977.5.1 ID=mRNA_C-australica_Contig_977.5.1|Name=mRNA_C-australica_Contig_977.5.1|organism=Chrysoparadoxa australica CS_1217|type=mRNA|length=1584bp|location=Sequence derived from alignment at C-australica_Contig_977:9872..11455- (Chrysoparadoxa australica CS_1217)
ATGTATACTGTACGTACATATGTACTCTCCTGTACGTACCTCCTACCCTT
AGCGGTTAAGGCCACGCACCTCCTTTACGCTGCTGTGTCGTCTTTGCTCT
TGCATGGCTCTTGGGCTCCCTCCCTAGCCATGGACAGGTCACTATTCAAG
GCCGCAGCAAACCAGAGGGCACGGGCAGGGAGCAGCACCAAACCCAAGTA
CAGGGGAAAGAGTAAGGCTGAATTGCTGGCACTGCTAAAGGCCAAGCAGG
CAGCTCAAGAGCAAGAAAAGGCAGCCCCAGTATCCCCATCTGGAAGCTCC
AAACCTGTGCAGCCTGCGCAACCTGCGCAACCAACACAAGCGGCCTCGCT
TCCTGTGGGATTCTTTGATCAGGACGAGAATGGGGGCATTCAGGCGGAAA
GCAGCCCTGCAACACAGCAGATGCAGCAAGGTGGTGATGCATGGATGGCA
TCTTTGCCCACATTGTTTTGCCTCCGTAGCACCCTGCTGCCGTTCCAAGT
CAAGTCAAGCTGCTCACTCATATTTTTTCCTGTCTTCATTGCAGCATGGC
AGGAGCAAGGGCTTGAGCAGGAAGGTGGTACAATCAGTGCAGAGGGCACC
CTTCCTGCTGACTTCTTCGACGCGCCCACAAAATCAGGTCTCCCCCTATT
CTCTCATTCATCATTTCTTTTTTGTTTCCTCACACTGGAAGAACACCCGT
ACCATGGACCCTCCTATCTATCATTAACCCAGAATCATCACTCCTGTTCA
CCGACCAACTGCTGAATTCCCTGCAATTTGCCTTTTCCTATAACCTCTTG
CTTACCACTAGGATCACCACCCTTTGTTGCTCACTCACTACCCACTGCTG
GATACGTTGAAAACCATGCCTTACCGAAGTGATTCATTCTCTGAGACTTA
GCAGCAGCAGTAAGACCTTGAATTGAACACTGTTTAATCTTTCCTCTTTC
TTTCTTTCCCATCTCCTGATGGCCCATTTACTCTTTAACAACCTATCTCA
CTGAGCATCTCAAACACACACCAACTGTGCCATAACTTGACTCCACTGCA
CACCTTGCTTGGCTTAGCCCCTCAGGCTCCCAAGGAGAAGCGAAAGAAGC
TTACTCCTGAGCAGCAGGTCATCTTTTGCGCCTTGTGCTTGTTTTTTTTT
TTTTGTGCGGAACAGATCCTCAATAGCAATTGCCTTGGCTAGATTGCAGT
GCGACTCCCCTCATGAGGCTCGATGAAGCTCATCACTCCTTTATGGCTCT
TGGCAAGCCATAGTTGATTCATATCTCACGCCTTCCACCTCAATTTGTAT
AGGCTGATTGGGGGGAGTTTCAAACATTTGCTGCCAAAGTTAATAAGGAC
GAAGCTGAAGAGGAAGTGGGGGACGAGGCAATAGAGATGGACACCAAGCT
GCAAGTTAGTTGTCTCTTAAGTATCAGATTGAACAAGGGGGTTTGCTCTG
CTTTTGGGACATTTGCCCCACATGCCATATATTGCGTGGTGAGCCCCACA
AGCTCATGCCACGTTCTCCTTGAATGCTTGTTTCAGGAGGAGCGAGAGCA
GTTGGAGCAGCTTACGTACATGGGCCGCTTTGCA back to topCoding sequence (CDS) from alignment at C-australica_Contig_977:9872..11455- >mRNA_C-australica_Contig_977.5.1 ID=mRNA_C-australica_Contig_977.5.1|Name=mRNA_C-australica_Contig_977.5.1|organism=Chrysoparadoxa australica CS_1217|type=CDS|length=855bp|location=Sequence derived from alignment at C-australica_Contig_977:9872..11455- (Chrysoparadoxa australica CS_1217)
ATGTATACTGTACGTACATATGTACTCTCCTGTACGTACCTCCTACCCTT
AGCGGTTAAGGCCACGCACCTCCTTTACGCTGCTGTGTCGTCTTTGCTCT
TGCATGGCTCTTGGGCTCCCTCCCTAGCCATGGACAGGTCACTATTCAAG
GCCGCAGCAAACCAGAGGGCACGGGCAGGGAGCAGCACCAAACCCAAGTA
CAGGGGAAAGAGTAAGGCTGAATTGCTGGCACTGCTAAAGGCCAAGCAGG
CAGCTCAAGAGCAAGAAAAGGCAGCCCCAGTATCCCCATCTGGAAGCTCC
AAACCTGTGCAGCCTGCGCAACCTGCGCAACCAACACAAGCGGCCTCGCT
TCCTGTGGGATTCTTTGATCAGGACGAGAATGGGGGCATTCAGGCGGAAA
GCAGCCCTGCAACACAGCAGATGCAGCAAGCATGGCAGGAGCAAGGGCTT
GAGCAGGAAGGTGGTACAATCAGTGCAGAGGGCACCCTTCCTGCTGACTT
CTTCGACGCGCCCACAAAATCAGCCCCTCAGGCTCCCAAGGAGAAGCGAA
AGAAGCTTACTCCTGAGCAGCAGGCTGATTGGGGGGAGTTTCAAACATTT
GCTGCCAAAGTTAATAAGGACGAAGCTGAAGAGGAAGTGGGGGACGAGGC
AATAGAGATGGACACCAAGCTGCAAGTTAGTTGTCTCTTAAGTATCAGAT
TGAACAAGGGGGTTTGCTCTGCTTTTGGGACATTTGCCCCACATGCCATA
TATTGCGTGGTGAGCCCCACAAGCTCATGCCACGTTCTCCTTGAATGCTT
GTTTCAGGAGGAGCGAGAGCAGTTGGAGCAGCTTACGTACATGGGCCGCT
TTGCA back to top
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