Homology
BLAST of mRNA_C-australica_Contig_977.1.1 vs. uniprot
Match:
A0A836CA23_9STRA (NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 7 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CA23_9STRA)
HSP 1 Score: 357 bits (915), Expect = 5.760e-119
Identity = 183/282 (64.89%), Postives = 213/282 (75.53%), Query Frame = 1
Query: 94 LAIHAQNAGVGKMIKPQRIVIVRHGESMGNLDETAYGTIPDWLIPLTKQGHEDARNTGRL-----------VKQHVRDGPVFFYTSPYLRTKQTLAGMVEAFTSNEIIGVREEPRLTEQQFGNFQNXXXXXXXXXERARFGRFYYRFPEGESGLDVYNRATSFIATMFRDFANPLIARDDITVIIVTHGLTLRLLVMRWFRYSILEFESTFNPPNGGFVVMERRNN----------------PEGEGEAWYELTKESLEMINLKPQSAEGLSLPKLLSQLPK 858
L I++ + G K++KP+RI+IVRHGESMGNLDE+ Y +PDW IPLTKQG+ DAR G+ +K+HV D P+F YTSPYLRTKQTLAGMVEAF +N I+GVREEPRLTEQQFGNFQN ERARFGRFYYRFPEGESGLDVYNRATSFIATMFRDF+N IARDD+ V+IVTHGLTLRL+VMRWF+YSI +FE+T+NPPNGG VVMERR P+G EAWYELT ESL++INLKPQ G SL +LLS+LP+
Sbjct: 66 LGIYSADHGHRKLVKPERIIIVRHGESMGNLDESTYVHVPDWKIPLTKQGYRDARLAGQKXXXXXXXXXXKIKEHVGDKPLFIYTSPYLRTKQTLAGMVEAFDTNYIVGVREEPRLTEQQFGNFQNLATIRDSKQERARFGRFYYRFPEGESGLDVYNRATSFIATMFRDFSNEQIARDDLNVVIVTHGLTLRLMVMRWFQYSIADFENTYNPPNGGHVVMERRGGECARLQRTSEAHRGKGPKGGSEAWYELTPESLDLINLKPQRQFG-SLWRLLSELPQ 346
BLAST of mRNA_C-australica_Contig_977.1.1 vs. uniprot
Match:
A0A6H5JRP2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRP2_9PHAE)
HSP 1 Score: 336 bits (862), Expect = 7.510e-112
Identity = 172/274 (62.77%), Postives = 202/274 (73.72%), Query Frame = 1
Query: 73 PHADQNSLAIHAQNAGVGKMIKPQRIVIVRHGESMGNLDETAYGTIPDWLIPLTKQGHEDARNTGRLVKQHVRDGPVFFYTSPYLRTKQTLAGMVEAFTSNEIIGVREEPRLTEQQFGNFQNXXXXXXXXXERARFGRFYYRFPEGESGLDVYNRATSFIATMFRDFANPLIARDDITVIIVTHGLTLRLLVMRWFRYSILEFESTFNPPNGGFVVMERRNNPEGEGEA-------------WYELTKESLEMINLKPQSAEGLSLPKLLSQLP 855
PH+DQ SL + + + G +++KP+RI+IVRHGES+GN DE+ Y +PDW IPLTK+G + + G +K+++ D P+F YTSPYLRTKQTLAGMVEAF +N I+GVREEPRLTEQQFGNFQN ERARFGRFYYRFP+GESGLDVYNRATSFIATMFRDFAN IARDD+ VIIVTHGLTLRLLVMRWF+YSI +FE T NP NG FVVMER+ + + WYELT ES IN K Q G SL KLLS+LP
Sbjct: 19 PHSDQESLGLFSGD-GKRRVVKPERIIIVRHGESLGNRDESTYVHVPDWKIPLTKKGFGEGQKAGEKIKEYIGDKPLFIYTSPYLRTKQTLAGMVEAFDTNYIVGVREEPRLTEQQFGNFQNLATIVNSKAERARFGRFYYRFPQGESGLDVYNRATSFIATMFRDFANESIARDDLNVIIVTHGLTLRLLVMRWFQYSIADFEETLNPENGSFVVMERKEKEDTDSRFFKDVSAERRDLRHWYELTPESRAHINFKEQQQFG-SLWKLLSELP 290
BLAST of mRNA_C-australica_Contig_977.1.1 vs. uniprot
Match:
D7FZ54_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZ54_ECTSI)
HSP 1 Score: 318 bits (816), Expect = 1.660e-104
Identity = 153/236 (64.83%), Postives = 186/236 (78.81%), Query Frame = 1
Query: 73 PHADQNSLAIHAQNAGVGKMIKPQRIVIVRHGESMGNLDETAYGTIPDWLIPLTKQGHEDARNTGRLVKQHVRDGPVFFYTSPYLRTKQTLAGMVEAFTSNEIIGVREEPRLTEQQFGNFQNXXXXXXXXXERARFGRFYYRFPEGESGLDVYNRATSFIATMFRDFANPLIARDDITVIIVTHGLTLRLLVMRWFRYSILEFESTFNPPNGGFVVMERRNNPEGEGEAWYELTKE 780
PH+DQ SL + + + G +++KP+RI+IVRHGES+GN DE+ Y +PDW IPLTK+G + + G +K+++ D P+F YTSPYLRTKQTLAGMVEAF +N I+GVREEPRLTEQQFGNFQN ERARFGRFYYRFP+GESGLDVYNRATSFIATMFRDFAN IARDD+ VIIVTHGLTLRLLVMRWF+YSI +FE T NP NG FVVMER+ + + + +++ E
Sbjct: 97 PHSDQESLGLFSGD-GKRRVVKPERIIIVRHGESLGNRDESTYVHVPDWKIPLTKKGFGEGQKAGEKIKEYIGDKPLFIYTSPYLRTKQTLAGMVEAFDTNYIVGVREEPRLTEQQFGNFQNLATIVNSKAERARFGRFYYRFPQGESGLDVYNRATSFIATMFRDFANESIARDDLNVIIVTHGLTLRLLVMRWFQYSIADFEETLNPENGSFVVMERKEKEDTDSRFFKDVSAE 331
BLAST of mRNA_C-australica_Contig_977.1.1 vs. uniprot
Match:
A0A7S1XZK9_9STRA (Hypothetical protein n=4 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XZK9_9STRA)
HSP 1 Score: 295 bits (755), Expect = 4.870e-94
Identity = 151/269 (56.13%), Postives = 189/269 (70.26%), Query Frame = 1
Query: 130 MIKPQRIVIVRHGESMGNLDETAYGTIPDWLIPLTKQGHEDARNTGRLVKQHVRDGPVFFYTSPYLRTKQTLAG----------------------------MVEAFTSNEIIGVREEPRLTEQQFGNFQNXXXXXXXXXERARFGRFYYRFPEGESGLDVYNRATSFIATMFRDFANPLIARDDITVIIVTHGLTLRLLVMRWFRYSILEFESTFNPPNGGFVVMERRNNPEGEGEAWYELTKESLEMINLKPQSAEGLSLPKLLSQL 852
+++P RI++VRHGES GN+D AY PDW IPLTK+G +DAR G+ +K+ V D P++ YTSPYLRTKQTLAG MV A+ +NEI+GVREEPRLTEQQFGNFQN +R RFGRFY+RFPEGESGLDVYNR TSFIAT+FRDF+N IAR+D+ VIIVTHGLTLRL +MR+F Y+I +FE+++NP NG FVVM+R+ PEG+ +WYEL E E +NL PQ+ G SL K+L ++
Sbjct: 79 IVRPARIILVRHGESAGNVDPQAYVNTPDWKIPLTKKGWKDARLAGQQIKEIVGDSPIYIYTSPYLRTKQTLAGKGSPQPRSLPLSLAPLPLSSTRPPAPPGMVGAWDTNEIVGVREEPRLTEQQFGNFQNVTNVKESREQRTRFGRFYFRFPEGESGLDVYNRVTSFIATLFRDFSNKDIAREDLDVIIVTHGLTLRLFLMRFFHYTIHDFENSYNPNNGAFVVMQRQEGPEGQ--SWYELMPEGREALNLPPQNGVG-SLWKILQEM 344
BLAST of mRNA_C-australica_Contig_977.1.1 vs. uniprot
Match:
A0A7S2SR22_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SR22_9STRA)
HSP 1 Score: 273 bits (699), Expect = 1.600e-87
Identity = 131/246 (53.25%), Postives = 175/246 (71.14%), Query Frame = 1
Query: 130 MIKPQRIVIVRHGESMGNLDETAYGTIPDWLIPLTKQGHEDARNTGRLVKQHVRDGPVFFYTSPYLRTKQTLAGMVEAFTSNEIIGVREEPRLTEQQFGNFQNXXXXXXXXXERARFGRFYYRFPEGESGLDVYNRATSFIATMFRDFANPLIARD-----DITVIIVTHGLTLRLLVMRWFRYSILEFESTFNPPNGGFVVMERRNNPEGEGEAWYELTKESLEMINLKPQSAEGLSLPKLLSQL 852
+++P+RI +VRHGES+GN+ Y +PDW I LT++G E A+ TG + + + PVFFYTSPY RTK+TL MV F ++I+GVREEPRLTEQQFGNFQN ER+ +GRFYYRFP+GESG DVY R ++F+ ++RD AN + + D+ V+IV+HGLTLRLL+MRWF+Y+I +FE + NPPN FVVMERR + G WYELT+ESL+++N P +G SL KL+S+L
Sbjct: 38 LVRPKRIFVVRHGESLGNISPEVYINVPDWRISLTEEGKEQAKATGSKISHIIGEDPVFFYTSPYRRTKETLQSMVTEFEQSDIVGVREEPRLTEQQFGNFQNLDEIQICKVERSSYGRFYYRFPQGESGFDVYTRVSTFLPDLYRDAANAELFGEGQTARDLNVVIVSHGLTLRLLLMRWFQYTISDFEQSHNPPNAAFVVMERREDQAHTGREWYELTEESLKLLNYSPPEHKG-SLWKLMSEL 282
BLAST of mRNA_C-australica_Contig_977.1.1 vs. uniprot
Match:
A0A4D9D0Z6_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D0Z6_9STRA)
HSP 1 Score: 273 bits (699), Expect = 2.850e-85
Identity = 134/231 (58.01%), Postives = 164/231 (71.00%), Query Frame = 1
Query: 127 KMIKPQRIVIVRHGESMGNLDETAYGTIPDWLIPLTKQGHEDARNTGRLVKQHVRDGPVFFYTSPYLRTKQTLAGMVEAFTSNEIIGVREEPRLTEQQFGNFQNXXXXXXXXXERARFGRFYYRFPEGESGLDVYNRATSFIATMFRDFANPLIARDDITVIIVTHGLTLRLLVMRWFRYSILEFESTFNPPNGGFVVMERRNNPEG--EGEAWYELTKESLEMINLKPQS 813
++ KP RI++VRHGES GN+DE Y PDW +PL+ GHE AR TGR +K V D P++ YTSPY RTKQTL+ ++E+F N +GVREEPR+TEQQFGNFQ ER FGRFY+RFP GESGLDVY R TSFI+TMFRDFA+ I R D+ ++IVTHGLTLRLL+MRWF+ ++ FEST NPPNG FVVM R+ P G G YE+ ES +I+L S
Sbjct: 171 QITKPHRIILVRHGESTGNVDERVYVETPDWKVPLSPIGHEQARQTGRQLKALVGDEPLYIYTSPYRRTKQTLSNILESFEDNLKVGVREEPRITEQQFGNFQCQQLMQQAKKERCNFGRFYFRFPNGESGLDVYTRVTSFISTMFRDFADGHICRPDLNIVIVTHGLTLRLLLMRWFKLTVDTFESTTNPPNGSFVVMTRKEGPRGGRSGGGVYEMAPESAALISLSCDS 401
BLAST of mRNA_C-australica_Contig_977.1.1 vs. uniprot
Match:
A0A7S3XT41_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XT41_HETAK)
HSP 1 Score: 245 bits (625), Expect = 2.220e-77
Identity = 123/192 (64.06%), Postives = 147/192 (76.56%), Query Frame = 1
Query: 292 DGPVFFYTSPYLRTKQTLAGMVEAFTSNEIIGVREEPRLTEQQFGNFQNXXXXXXXXXERARFGRFYYRFPEGESGLDVYNRATSFIATMFRDFANPLIARDDITVIIVTHGLTLRLLVMRWFRYSILEFESTFNPPNGGFVVMERRNNPEGEGEAWYELTKESLEMINLKPQSAEGLSLPKLLSQLPKVSK 867
D P+ FY SPY RTKQTLAGM+ A +N+IIG REEPRLTEQQFGNFQN ERARFGRFYYRFP+GESGLDVYNR+TSFIATM RD ANP +AR + +IVTHGLTLRL +MRWF+YS+ +FE + NPPNGG V+ME+ ++P+G E WYELT +SLE++ K Q G SL KLL LP+V +
Sbjct: 1 DAPLLFYCSPYRRTKQTLAGMMGALETNDIIGAREEPRLTEQQFGNFQNVLTTRQSKDERARFGRFYYRFPQGESGLDVYNRSTSFIATMHRDMANPALARPGLHSVIVTHGLTLRLFLMRWFQYSVEDFEESHNPPNGGVVIMEKVSDPQGRHE-WYELTDDSLELLKFKRQHRYG-SLWKLLDGLPQVDE 190
BLAST of mRNA_C-australica_Contig_977.1.1 vs. uniprot
Match:
A0A7S0SR39_9STRA (Hypothetical protein n=1 Tax=Chromulina nebulosa TaxID=96789 RepID=A0A7S0SR39_9STRA)
HSP 1 Score: 242 bits (617), Expect = 9.950e-75
Identity = 115/207 (55.56%), Postives = 153/207 (73.91%), Query Frame = 1
Query: 121 VGKMIKPQRIVIVRHGESMGNLDETAYGTIPDWLIPLTKQGHEDARNTGRLVKQHV-RDGPVFFYTSPYLRTKQTLAGMVEAFTSNEIIGVREEPRLTEQQFGNFQNXXXXXXXXXERARFGRFYYRFPEGESGLDVYNRATSFIATMFRDFANPLIAR---DDITVIIVTHGLTLRLLVMRWFRYSILEFESTFNPPNGGFVVMER 729
+ K+ P+RI++VRHGES+GN+DE AY ++PDW IPLT++G E A N G+ +K+ + + P+ Y SPY+RTKQT A M++ ++N +I VREEPRLTEQQFGNFQ ER +FGRFYYRFP+GESGLDVY+R +SFI T+FR++A R +D +IIVTHGLTLRL +MRWF++S+ EFE+T NP NG +VM R
Sbjct: 39 MNKLRLPKRIILVRHGESLGNVDELAYCSMPDWKIPLTEKGKEQASNVGKKIKEIIGNNSPISVYLSPYIRTKQTFALMIKELSNNNVITVREEPRLTEQQFGNFQKAEDMIRYKKERGQFGRFYYRFPDGESGLDVYSRVSSFIGTLFREWAKEQSTRSNHEDNNIIIVTHGLTLRLFLMRWFQFSVSEFENTRNPNNGDIIVMNR 245
BLAST of mRNA_C-australica_Contig_977.1.1 vs. uniprot
Match:
A0A8J5XQ82_DIALT (Uncharacterized protein n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J5XQ82_DIALT)
HSP 1 Score: 231 bits (590), Expect = 4.030e-71
Identity = 112/227 (49.34%), Postives = 154/227 (67.84%), Query Frame = 1
Query: 136 KPQRIVIVRHGESMGNLDETAYGTIPDWLIPLTKQGHEDARNTGRLVKQHVR--DGPVFFYTSPYLRTKQTLAGMVEAFTSNEIIGVREEPRLTEQQFGNFQNXXXXXXXXXERARFGRFYYRFPEGESGLDVYNRATSFIATMFRD---FANPLIARDDITVIIVTHGLTLRLLVMRWFRYSILEFESTFNPPNGGFVVMERRNNPEGEGEAWYELTKESLEMINL 801
+P+RIV+VRHGES+GNLDE Y T PDW+IPLT++G E+A GR + + + D VFFY SPYLR + TL MV +++GVREEPR++EQQFGN Q+ +R FGRFYYRFP+GES LDVY+R +SFIAT++RD + + ++ +++V HGL+ R +MRWF+ + +FE N PNG +VMER+ N GE WYEL++ES ++NL
Sbjct: 30 RPRRIVLVRHGESLGNLDEAVYTTTPDWMIPLTQRGIEEAMAAGRALNKLLAHPDANVFFYHSPYLRARMTLDEMVAQLDPQKVVGVREEPRISEQQFGNLQSVALMQEAKSDRNAFGRFYYRFPDGESALDVYSRVSSFIATVYRDVDSMRSQRVLTEETHIVMVAHGLSARTFIMRWFQLPVADFEKLANQPNGSLLVMERQQN--AAGEQWYELSQESWNLLNL 254
BLAST of mRNA_C-australica_Contig_977.1.1 vs. uniprot
Match:
A0A7S3QIR9_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3QIR9_9STRA)
HSP 1 Score: 228 bits (580), Expect = 2.600e-69
Identity = 109/225 (48.44%), Postives = 154/225 (68.44%), Query Frame = 1
Query: 136 KPQRIVIVRHGESMGNLDETAYGTIPDWLIPLTKQGHEDARNTGRLVKQHVRDGPVFFYTSPYLRTKQTLAGMVEAFTSNEIIGVREEPRLTEQQFGNFQNXXXXXXXXXERARFGRFYYRFPEGESGLDVYNRATSFIATMFRD---FANPLIARDDITVIIVTHGLTLRLLVMRWFRYSILEFESTFNPPNGGFVVMERRNNPEGEGEAWYELTKESLEMINL 801
+P RI+++RHGES+GN+D++AY PDW +PLT++G + + + G+ + V DG VFFY SPY RT+ T+ +++ ++II REEPR++EQQFGNFQN ER FGRFYYRF GE+GLDVY+R +SFI+T+ RD + D + V+IVTHGL+LRL +MRWF++ + EFE+T NP N VVM++R P G WYEL +++ E +NL
Sbjct: 61 RPTRIILIRHGESLGNVDDSAYVATPDWKVPLTERGRQQSFDAGKELADIVGDGQVFFYYSPYKRTRATVDELLKHINKSQIISTREEPRISEQQFGNFQNVEQVWESKKERHEFGRFYYRFKSGEAGLDVYSRVSSFISTLVRDCQQYQKAGYELDTVNVVIVTHGLSLRLFLMRWFQFGVEEFEATKNPDNAALVVMKKRCPPGGH--RWYELDEKNREELNL 283
The following BLAST results are available for this feature:
BLAST of mRNA_C-australica_Contig_977.1.1 vs. uniprot
Analysis Date: 2022-09-19 (
Diamond blastx: OGS1.0 vs UniRef90 )
Total hits: 25
0 1 Expect = 5.76e-119 / Id = 64.89 Expect = 7.51e-112 / Id = 62.77 Expect = 1.66e-104 / Id = 64.83 Expect = 4.87e-94 / Id = 56.13 Expect = 1.60e-87 / Id = 53.25 Expect = 2.85e-85 / Id = 58.01 Expect = 2.22e-77 / Id = 64.06 Expect = 9.95e-75 / Id = 55.56 Expect = 4.03e-71 / Id = 49.34 Expect = 2.60e-69 / Id = 48.44 Sequence A0A836CA23_9STRA A0A6H5JRP2_9PHAE D7FZ54_ECTSI A0A7S1XZK9_9STRA A0A7S2SR22_9STRA A0A4D9D0Z6_9STRA A0A7S3XT41_HETAK A0A7S0SR39_9STRA A0A8J5XQ82_DIALT A0A7S3QIR9_9STRA
Pages
back to top
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Property Name Value
Stop 1
Start 0
Seed ortholog 2880.D7FZ54
PFAMs His_Phos_1
Model size 1009
Max annot lvl 2759|Eukaryota
Hectar predicted targeting category other localisation
GOs GO:0003674,GO:0003824,GO:0003993,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0005829,GO:0006793,GO:0006796,GO:0006810,GO:0006869,GO:0008150,GO:0008152,GO:0009987,GO:0010876,GO:0015850,GO:0015918,GO:0016311,GO:0016787,GO:0016788,GO:0016791,GO:0032365,GO:0032366,GO:0033036,GO:0042578,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044237,GO:0044424,GO:0044444,GO:0044464,GO:0046907,GO:0051179,GO:0051234,GO:0051641,GO:0051649,GO:0071702
Exons 7
Evalue 2.72e-105
EggNOG OGs 2CMFW@1|root,2QQ8J@2759|Eukaryota
Ec32 ortholog description Histidine phosphatase superfamily
Ec32 ortholog Ec-02_006330.1
Description Histidine phosphatase superfamily (branch 1)
Cds size 1008
COG category S
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Feature Name Unique Name Species Type Position
1682588842.9881237-CDS-C-australica_Contig_977:636..765 1682588842.9881237-CDS-C-australica_Contig_977:636..765 Chrysoparadoxa australica CS_1217 CDS C-australica_Contig_977 637..765 +
1682588842.9976842-CDS-C-australica_Contig_977:825..891 1682588842.9976842-CDS-C-australica_Contig_977:825..891 Chrysoparadoxa australica CS_1217 CDS C-australica_Contig_977 826..891 +
1682588843.0121243-CDS-C-australica_Contig_977:969..1122 1682588843.0121243-CDS-C-australica_Contig_977:969..1122 Chrysoparadoxa australica CS_1217 CDS C-australica_Contig_977 970..1122 +
1682588843.0276892-CDS-C-australica_Contig_977:1253..1402 1682588843.0276892-CDS-C-australica_Contig_977:1253..1402 Chrysoparadoxa australica CS_1217 CDS C-australica_Contig_977 1254..1402 +
1682588843.0437324-CDS-C-australica_Contig_977:1489..1634 1682588843.0437324-CDS-C-australica_Contig_977:1489..1634 Chrysoparadoxa australica CS_1217 CDS C-australica_Contig_977 1490..1634 +
1682588843.0553045-CDS-C-australica_Contig_977:1789..1885 1682588843.0553045-CDS-C-australica_Contig_977:1789..1885 Chrysoparadoxa australica CS_1217 CDS C-australica_Contig_977 1790..1885 +
1682588843.063094-CDS-C-australica_Contig_977:2017..2287 1682588843.063094-CDS-C-australica_Contig_977:2017..2287 Chrysoparadoxa australica CS_1217 CDS C-australica_Contig_977 2018..2287 +
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-australica_Contig_977.1.1
>prot_C-australica_Contig_977.1.1 ID=prot_C-australica_Contig_977.1.1|Name=mRNA_C-australica_Contig_977.1.1|organism=Chrysoparadoxa australica CS_1217|type=polypeptide|length=336bp
SLAELRPRKGTRCYYASTRRMNYSPHADQNSLAIHAQNAGVGKMIKPQRI VIVRHGESMGNLDETAYGTIPDWLIPLTKQGHEDARNTGRLVKQHVRDGP VFFYTSPYLRTKQTLAGMVEAFTSNEIIGVREEPRLTEQQFGNFQNLQTI QSSKAERARFGRFYYRFPEGESGLDVYNRATSFIATMFRDFANPLIARDD ITVIIVTHGLTLRLLVMRWFRYSILEFESTFNPPNGGFVVMERRNNPEGE GEAWYELTKESLEMINLKPQSAEGLSLPKLLSQLPKVSKASLHYHLLHFS HFLFLLLQGGRGSPASDLHSSSIGWGTRRSAVMPR* back to top mRNA from alignment at C-australica_Contig_977:637..2287+
Legend: polypeptide CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_C-australica_Contig_977.1.1 ID=mRNA_C-australica_Contig_977.1.1|Name=mRNA_C-australica_Contig_977.1.1|organism=Chrysoparadoxa australica CS_1217|type=mRNA|length=1651bp|location=Sequence derived from alignment at C-australica_Contig_977:637..2287+ (Chrysoparadoxa australica CS_1217)TCCTTGGCAGAATTAAGGCCGCGGAAAGGTACAAGATGCTACTATGCCTC
AACGCGGCGAATGAATTACAGTCCCCATGCGGACCAGAACAGCTTAGCGA
TACATGCTCAGAATGCTGGGGTTGGCAAG GTTGTCTTGAAAGTTAAGCTT
GTACCTAAGTAGTTATAATTCTAATTGTCTTGCCGGTAGATGATCAAGCC
GCAACGCATTGTCATTGTGAGGCATGGTGAGAGTATGGGCAACCTAGATG
AAACG GTGAGCAACACAAGACACAGTTGCAATTGAAGTGCCACCCTAGTT
GCTCCACTCAAGAATTTATTGCCCTCTGCTCAGGCTTATGGAACCATCCC
AGACTGGCTCATCCCTTTAACCAAGCAAGGCCACGAGGATGCCAGGAACA
CTGGTCGACTGGTCAAGCAGCACGTCCGTGATGGACCTGTCTTTTTTTAC
ACAAGCCCATACCTGCGGACGAAGCAAACCCTCGCA GTGAGTGAACGCAG
TATGTTAGCGGTCTCGTTGCATGATGTCCCATCTTGAAGTGTTTCATAAG
AATGGAGCCAAGGATCAATCATCCTACCCACACGCTTGCCCCTTACACTT
GGCGGCCTCTTTTCCAGGGCATGGTAGAAGCGTTTACCTCGAATGAAATC
ATTGGTGTTCGGGAAGAGCCTCGCTTGACGGAGCAGCAGTTTGGGAACTT
CCAAAACTTGCAGACTATTCAGAGCTCCAAGGCTGAGCGTGCGCGTTTTG
GGAGGTTTTACTATCG GTGAGCTCCCACACATTTGGCGTAATTCAAGTAA
CCTATCTACCTAAAAAAACCTGCTCTCTCACGCCGTCCATGCTCTTGCGC
AAGGTTTCCAGAGGGTGAATCAGGGCTCGATGTGTATAATCGAGCGACAT
CATTCATCGCTACTATGTTTCGTGATTTTGCCAATCCATTGATTGCTCGG
GACGATATCACTGTTATCATTGTCACGCACGGGCTGACTTTAAGATTG GT
GAGTGCTAGCTAGCAGTAGTGAGGCAGCCCTTAGGTAGCCTTGCCGATGA
TGTGTTATGTTGTCAGCTGACTGGTAGCTGCAGGGATTGCCACTCCCGGT
GGCGCCTGACTCTCTCTGTAACAGCAACCTCTAATGCACCTGTTTATCTG
CAGCTTGTAATGCGGTGGTTTCGATACTCCATCCTTGAATTCGAGAGCAC
CTTCAACCCTCCCAATGGAGGCTTCGTTGTCATGGAAAGAAGAAACAAT G
TATGTCCAGAATTGGCTTTGGGATATAATTATGTAATTAGATCACAGGCT
TGGCCTCTCACGGGGCCCTTAGACATGAGCTAGCCTTGCTTCTCGCCTGT
TTTTCCTGCCTCACCCTAAGTTTTTTTCAAGCCTGAAGGTGAAGGTGAAG
CCTGGTACGAGCTTACGAAAGAATCCCTTGAGATGATCAACCTCAAGCCT
CAGAGTGCTGAGGGTTTGTCGTTGCCCAAGCTCTTATCTCAGCTACCCAA
GGTATCCAAGGCTTCTTTACACTACCATCTGCTGCACTTCTCTCACTTCC
TTTTTCTTCTCCTTCAAGGAGGAAGAGGGAGTCCTGCCTCAGACCTCCAT
AGCTCCAGTATTGGATGGGGAACCAGACGATCAGCTGTAATGCCACGCTG
A back to top Coding sequence (CDS) from alignment at C-australica_Contig_977:637..2287+
>mRNA_C-australica_Contig_977.1.1 ID=mRNA_C-australica_Contig_977.1.1|Name=mRNA_C-australica_Contig_977.1.1|organism=Chrysoparadoxa australica CS_1217|type=CDS|length=1008bp|location=Sequence derived from alignment at C-australica_Contig_977:637..2287+ (Chrysoparadoxa australica CS_1217) TCCTTGGCAGAATTAAGGCCGCGGAAAGGTACAAGATGCTACTATGCCTC AACGCGGCGAATGAATTACAGTCCCCATGCGGACCAGAACAGCTTAGCGA TACATGCTCAGAATGCTGGGGTTGGCAAGATGATCAAGCCGCAACGCATT GTCATTGTGAGGCATGGTGAGAGTATGGGCAACCTAGATGAAACGGCTTA TGGAACCATCCCAGACTGGCTCATCCCTTTAACCAAGCAAGGCCACGAGG ATGCCAGGAACACTGGTCGACTGGTCAAGCAGCACGTCCGTGATGGACCT GTCTTTTTTTACACAAGCCCATACCTGCGGACGAAGCAAACCCTCGCAGG CATGGTAGAAGCGTTTACCTCGAATGAAATCATTGGTGTTCGGGAAGAGC CTCGCTTGACGGAGCAGCAGTTTGGGAACTTCCAAAACTTGCAGACTATT CAGAGCTCCAAGGCTGAGCGTGCGCGTTTTGGGAGGTTTTACTATCGGTT TCCAGAGGGTGAATCAGGGCTCGATGTGTATAATCGAGCGACATCATTCA TCGCTACTATGTTTCGTGATTTTGCCAATCCATTGATTGCTCGGGACGAT ATCACTGTTATCATTGTCACGCACGGGCTGACTTTAAGATTGCTTGTAAT GCGGTGGTTTCGATACTCCATCCTTGAATTCGAGAGCACCTTCAACCCTC CCAATGGAGGCTTCGTTGTCATGGAAAGAAGAAACAATCCTGAAGGTGAA GGTGAAGCCTGGTACGAGCTTACGAAAGAATCCCTTGAGATGATCAACCT CAAGCCTCAGAGTGCTGAGGGTTTGTCGTTGCCCAAGCTCTTATCTCAGC TACCCAAGGTATCCAAGGCTTCTTTACACTACCATCTGCTGCACTTCTCT CACTTCCTTTTTCTTCTCCTTCAAGGAGGAAGAGGGAGTCCTGCCTCAGA CCTCCATAGCTCCAGTATTGGATGGGGAACCAGACGATCAGCTGTAATGC CACGCTGA back to top