mRNA_C-australica_Contig_9690.1.1 (mRNA) Chrysoparadoxa australica CS_1217
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Overview
Homology
BLAST of mRNA_C-australica_Contig_9690.1.1 vs. uniprot
Match: A0A836CBL7_9STRA (Myosin 29 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CBL7_9STRA) HSP 1 Score: 353 bits (907), Expect = 6.560e-108 Identity = 196/291 (67.35%), Postives = 232/291 (79.73%), Query Frame = 1
Query: 1 VAEAMASARSDACLLVSAEGSLAGIVTDNDMTRRVVAKGIDPEATVDAVMTSNPKCVHMDDSAMEALGVMVERHFRHLPVTGKDGTVTGLLDIAKCLYDAISRMERV-AKKSTDDGDGSAAQMAA----MAQAMATGGRRGMSAAQAAAMKAMMDKMFGGDGIQTLDDVLASKGRAIFVRPGDSVRSAAEAMADCRKAVLVVERGVLVGIFTPKDMLNRVLAKNLSPDETMVSDVMTPNPDSVLPELTVLDALHQMHECRYLHLPVVTDGGRVVGLVDVMEIINATVGKEG 858
VA AMA A+ DACLLV +GSL GI+TDND+TRRV+AKGID E +V +VMT +P+CV M+DSAMEALGVM+ERHFRHLPVT G VTG+LDIAKCLYDAI+R+ERV AK S+ D + Q A + AM R+GMS+AQAA M+ +M +MFG +G +L DVL S G+A+FV P D+VR AA AMAD RKAV+VVERG LVGI TPKD+LNRVLAK+ SPD+T+VSDVMTPNPDSV ++ VLDALHQMHE RYLHLPVV GRV+GLVDVMEIINAT+GKEG
Sbjct: 1877 VAAAMAGAKVDACLLVGEDGSLHGIITDNDLTRRVIAKGIDVEDSVASVMTQSPRCVVMEDSAMEALGVMIERHFRHLPVTDASGAVTGVLDIAKCLYDAITRLERVMAKHSSHSQDLKSGQGAEALKQLTMAMKQHNRKGMSSAQAATMQMLMMQMFGDEGEPSLQDVLKSAGQAVFVSPRDTVRDAATAMADGRKAVVVVERGKLVGILTPKDLLNRVLAKDRSPDDTLVSDVMTPNPDSVPADMPVLDALHQMHEQRYLHLPVVDANGRVMGLVDVMEIINATIGKEG 2167
BLAST of mRNA_C-australica_Contig_9690.1.1 vs. uniprot
Match: A0A7S3M8U3_9STRA (Hypothetical protein (Fragment) n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3M8U3_9STRA) HSP 1 Score: 262 bits (669), Expect = 3.470e-82 Identity = 159/295 (53.90%), Postives = 209/295 (70.85%), Query Frame = 1
Query: 1 VAEAMASARSDACLLVSAEGSLAGIVTDNDMTRRVVAKG-IDPEATVDAVMTSNPKCVHMDDSAMEALGVMVERHFRHLPVTGKDGTVTGLLDIAKCLYDAISRMERVA----KKSTDDGDGSAAQMA-AMAQAM--ATGGRRGMSAAQAAAMKAMMDKMFGGDGIQTLDDVLASKGRAIFVRPGDSVRSAAEAMADCRKAVLVVE--RGV-LVGIFTPKDMLNRVLAKNLSPDETMVSDVMTPNPDSVLPELTVLDALHQMHECRYLHLPVVTDGGRVVGLVDVMEIINATVGK 852
VA+ MA R DA LL+ AEG+L+GI+TDND+TRRV+A + + V AVMT NPKCV DSA++AL +MV+ FRHLPV + G V GLLDIAKCLYDAIS +E+V + S DG G+ MA AM +AM A GGR G + Q A++AMM+ MFGG+ + TL +L G+ V PG ++ A++ MA+ RK VLV++ RG L+GI TPKD+LNRV+AK LSPDET+VS+VMTPNPD V +LT+L+AL +M+E +YLHLPV GRV+G+VDVME++ +T G
Sbjct: 54 VAKKMALNRVDAALLLDAEGALSGIITDNDVTRRVIAVSLVSSDTLVSAVMTKNPKCVQSADSALDALEMMVDNRFRHLPVMDEQGVVVGLLDIAKCLYDAISVLEKVQGGGEEGSEKDGAGTGNAMAKAMTEAMKKAAGGR-GTNKQQLLAIQAMMETMFGGE-VPTLRTILGGSGKVQSVLPGATITEASKLMAEMRKGVLVMDAKRGKELLGILTPKDLLNRVIAKGLSPDETLVSEVMTPNPDCVTGDLTLLEALREMYEHKYLHLPVREADGRVIGIVDVMELVCSTAGN 346
BLAST of mRNA_C-australica_Contig_9690.1.1 vs. uniprot
Match: B7G2M6_PHATC (Predicted protein (Fragment) n=1 Tax=Phaeodactylum tricornutum (strain CCAP 1055/1) TaxID=556484 RepID=B7G2M6_PHATC) HSP 1 Score: 253 bits (645), Expect = 4.090e-78 Identity = 152/291 (52.23%), Postives = 194/291 (66.67%), Query Frame = 1
Query: 1 VAEAMASARSDACLLVSAEGSLAGIVTDNDMTRRVVAKGIDPEAT-VDAVMTSNPKCVHMDDSAMEALGVMVERHFRHLPVTGKDGTVTGLLDIAKCLYDAISRMERVAKKSTDDGDGSAAQMAAMAQAMATGGRRGMSAAQAAAMKAM----MDKMFGGDGIQTLDDVLASKGRAIFVRPGDSVRSAAEAMADCRKAVLVVERGVLVGIFTPKDMLNRVLAKNLSPDETMVSDVMTPNPDSVLPELTVLDALHQMHECRYLHLPVVTDGGRVVGLVDVMEIINATVGKEG 858
V++ ++S R A L+VS +GSLAGI+TD D+TRRVVAK ID AT V VMT NP CV M DSAM+AL MVE HFRHLPV G+V GLLDIAKCL DAIS++ER ++K+ + + QM A ++G AQAAA+KA+ M + FGG + TL +LA K V P S+R+ MAD RKA LVV+ G LVG+FT KDM++R +AK L D T VS VMTP+P+ V P++TVL+AL MH+ ++L LPV GRVVGLVDVM++I+ G EG
Sbjct: 27 VSQTLSSKRGAASLVVSTDGSLAGIMTDTDITRRVVAKHIDTSATSVSEVMTPNPTCVAMSDSAMDALTTMVENHFRHLPVVDDQGSVVGLLDIAKCLNDAISKLERTSEKTNSAAEDAVKQMVA---------QQGAGGAQAAALKALLGNLMSQAFGGKQMPTLRSLLAGK-PGTLVDPSTSIRNCGLRMADSRKAALVVDDGELVGVFTFKDMMSRAVAKELDLDVTPVSQVMTPSPEFVSPDMTVLEALQSMHDNKFLTLPVCESDGRVVGLVDVMDVIHGCGGAEG 307
BLAST of mRNA_C-australica_Contig_9690.1.1 vs. uniprot
Match: A0A7R9VL18_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9VL18_9STRA) HSP 1 Score: 244 bits (624), Expect = 6.940e-76 Identity = 150/291 (51.55%), Postives = 189/291 (64.95%), Query Frame = 1
Query: 1 VAEAMASARSDACLLVSAEGSLAGIVTDNDMTRRVVAKGIDPEAT-VDAVMTSNPKCVHMDDSAMEALGVMVERHFRHLPVTGKDGTVTGLLDIAKCLYDAISRMERVAKKSTDDGDGSAAQMAAMAQAMATGGRRGMSAAQAAAMKAM----MDKMFGGDGIQTLDDVLASKGRAIFVRPGDSVRSAAEAMADCRKAVLVVERGVLVGIFTPKDMLNRVLAKNLSPDETMVSDVMTPNPDSVLPELTVLDALHQMHECRYLHLPVVTDGGRVVGLVDVMEIINATVGKEG 858
V + +A+ R DA LLV +G LAGIVTD D+TRRVVAK +DP +T V AVMT++P CV M DSAM+AL MVE HFRHLPV +G V GLLDIAKCL DAIS++ER +KS + + QMA + +G AQAA ++ + M + FG TL +LA K A V+P ++ A + MA+ RKA LVVE G LVGIF KDM++R +AK L D T VS VMTPNP+SV PE TVL+AL MH+ ++L LPV G VVGLVDVM++I G +G
Sbjct: 51 VTQMLANKRGDAALLVGPDGGLAGIVTDTDITRRVVAKHVDPSSTSVSAVMTASPTCVSMTDSAMDALATMVENHFRHLPVVDDNGAVVGLLDIAKCLNDAISKLERAQEKSGSAAEDAVKQMANL---------QGAGGAQAAMLQQLLGPLMSQAFGDKASPTLRSLLAGK-PATVVQPNTTLLEAGQVMAEARKAALVVEDGELVGIFGFKDMMSRAVAKELPLDLTNVSSVMTPNPESVSPETTVLEALQVMHDNKFLTLPVCETNGTVVGLVDVMDVIYGCGGVDG 331
BLAST of mRNA_C-australica_Contig_9690.1.1 vs. uniprot
Match: A0A7S2PMW1_9STRA (Hypothetical protein (Fragment) n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2PMW1_9STRA) HSP 1 Score: 244 bits (624), Expect = 8.030e-76 Identity = 152/292 (52.05%), Postives = 195/292 (66.78%), Query Frame = 1
Query: 1 VAEAMASARSDACLLVSAEGSLAGIVTDNDMTRRVVAKGIDPEAT-VDAVMTSNPKCVHMDDSAMEALGVMVERHFRHLPVTGKDGTVTGLLDIAKCLYDAISRMERVAKKSTDDGDGSAAQMAAMAQAMATGGRRGMSAAQAAAMKAM----MDKMFGGDG-IQTLDDVLASKGRAIFVRPGDSVRSAAEAMADCRKAVLVVERGVLVGIFTPKDMLNRVLAKNLSPDETMVSDVMTPNPDSVLPELTVLDALHQMHECRYLHLPVVTDGGRVVGLVDVMEIINATVGKEG 858
V +AS R DA L+ SA G LAGI+TD D+TRRVVAK I+PE+T + +VMT+NP CV M DSAM+ALG MVE HFRHLPV +G V GLLDIAKCL DAIS++E+ +S DG+ +A + MA GG AQAAA++A+ M + FG G TL +LA K A V P ++R MA+ RKA LVVE G LVGIF KDM++R +AK L + T VS VMTP+P++V P++TVL+AL MH+ ++L LPV +GG VVG+VDVM++I G EG
Sbjct: 45 VTRMLASKRGDAALITSANGGLAGIITDTDVTRRVVAKYIEPESTSISSVMTANPTCVAMSDSAMDALGTMVENHFRHLPVVDDNGGVVGLLDIAKCLNDAISKLEK--SESKKDGNAAADAVKQMASLQGAGG------AQAAALQALLGPLMAQAFGNTGGSPTLRSLLAGK-PATIVSPQTNLRDTGIKMAEARKASLVVEDGRLVGIFGFKDMMSRAVAKGLPLESTPVSQVMTPDPETVSPDITVLEALQLMHDNKFLTLPVCEEGGEVVGVVDVMDVIYGCGGAEG 327
BLAST of mRNA_C-australica_Contig_9690.1.1 vs. uniprot
Match: A0A7S3M7R0_9STRA (Hypothetical protein (Fragment) n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3M7R0_9STRA) HSP 1 Score: 239 bits (610), Expect = 2.140e-73 Identity = 143/288 (49.65%), Postives = 191/288 (66.32%), Query Frame = 1
Query: 1 VAEAMASARSDACLLVSAEGSLAGIVTDNDMTRRVVAKG-IDPEATVDAVMTSNPKCVHMDDSAMEALGVMVERHFRHLPVTGKDGTVTGLLDIAKCLYDAISRMERV-AKKSTDDGDGSAAQMAAMAQAM-ATGGRRGMSAAQAAAMKAMMDKMFGGDGIQTLDDVLASKGRAIFVRPGDSVRSAAEAMADCRKAVLVVERGV-LVGIFTPKDMLNRVLAKNLSPDETMVSDVMTPNPDSVLPELTVLDALHQMHECRYLHLPVVTDGGRVVGLVDVMEIINATVGK 852
VA+ MA R DA LL+ AEG+L+GI+TDND+TRRV+A + + V AVMT NPKCV DSA++AL +MV+ FRHLPV + G V GLLD+AKCLYDAIS +E+V D+ D SA M A+ + GG + + AQ AM+AMM ++FGG + TL ++ VR ++R A M + RK +LV++ LVGI TPKD+L RV+A + SPD T VS VMTPNPD V +LT+L+AL +M+E +YLHLPV GRV+G+VDVME++ +T G
Sbjct: 54 VAKKMALNRVDAALLLDAEGALSGIITDNDVTRRVIAVSLVSSDTLVSAVMTKNPKCVQSADSALDALEMMVDNRFRHLPVMDEQGVVVGLLDVAKCLYDAISILEKVHGTDGADEADSSAVMAQVMTAALLSAGGAKHTNTAQVQAMQAMMAQVFGGS-VPTLRSIIGVGQALPSVRHTTNIREACAIMTEHRKGLLVLDEDEELVGIITPKDILTRVIAADKSPDITAVSSVMTPNPDCVTGDLTLLEALREMYEHKYLHLPVREADGRVIGIVDVMELVCSTAGN 340
BLAST of mRNA_C-australica_Contig_9690.1.1 vs. uniprot
Match: C6JVY2_PHATR (Myosin 29 n=3 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=C6JVY2_PHATR) HSP 1 Score: 253 bits (645), Expect = 9.100e-73 Identity = 152/291 (52.23%), Postives = 194/291 (66.67%), Query Frame = 1
Query: 1 VAEAMASARSDACLLVSAEGSLAGIVTDNDMTRRVVAKGIDPEAT-VDAVMTSNPKCVHMDDSAMEALGVMVERHFRHLPVTGKDGTVTGLLDIAKCLYDAISRMERVAKKSTDDGDGSAAQMAAMAQAMATGGRRGMSAAQAAAMKAM----MDKMFGGDGIQTLDDVLASKGRAIFVRPGDSVRSAAEAMADCRKAVLVVERGVLVGIFTPKDMLNRVLAKNLSPDETMVSDVMTPNPDSVLPELTVLDALHQMHECRYLHLPVVTDGGRVVGLVDVMEIINATVGKEG 858
V++ ++S R A L+VS +GSLAGI+TD D+TRRVVAK ID AT V VMT NP CV M DSAM+AL MVE HFRHLPV G+V GLLDIAKCL DAIS++ER ++K+ + + QM A ++G AQAAA+KA+ M + FGG + TL +LA K V P S+R+ MAD RKA LVV+ G LVG+FT KDM++R +AK L D T VS VMTP+P+ V P++TVL+AL MH+ ++L LPV GRVVGLVDVM++I+ G EG
Sbjct: 1814 VSQTLSSKRGAASLVVSTDGSLAGIMTDTDITRRVVAKHIDTSATSVSEVMTPNPTCVAMSDSAMDALTTMVENHFRHLPVVDDQGSVVGLLDIAKCLNDAISKLERTSEKTNSAAEDAVKQMVA---------QQGAGGAQAAALKALLGNLMSQAFGGKQMPTLRSLLAGK-PGTLVDPSTSIRNCGLRMADSRKAALVVDDGELVGVFTFKDMMSRAVAKELDLDVTPVSQVMTPSPEFVSPDMTVLEALQSMHDNKFLTLPVCESDGRVVGLVDVMDVIHGCGGAEG 2094
BLAST of mRNA_C-australica_Contig_9690.1.1 vs. uniprot
Match: A0A7R9VME7_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9VME7_9STRA) HSP 1 Score: 244 bits (624), Expect = 2.060e-72 Identity = 150/291 (51.55%), Postives = 189/291 (64.95%), Query Frame = 1
Query: 1 VAEAMASARSDACLLVSAEGSLAGIVTDNDMTRRVVAKGIDPEAT-VDAVMTSNPKCVHMDDSAMEALGVMVERHFRHLPVTGKDGTVTGLLDIAKCLYDAISRMERVAKKSTDDGDGSAAQMAAMAQAMATGGRRGMSAAQAAAMKAM----MDKMFGGDGIQTLDDVLASKGRAIFVRPGDSVRSAAEAMADCRKAVLVVERGVLVGIFTPKDMLNRVLAKNLSPDETMVSDVMTPNPDSVLPELTVLDALHQMHECRYLHLPVVTDGGRVVGLVDVMEIINATVGKEG 858
V + +A+ R DA LLV +G LAGIVTD D+TRRVVAK +DP +T V AVMT++P CV M DSAM+AL MVE HFRHLPV +G V GLLDIAKCL DAIS++ER +KS + + QMA + +G AQAA ++ + M + FG TL +LA K A V+P ++ A + MA+ RKA LVVE G LVGIF KDM++R +AK L D T VS VMTPNP+SV PE TVL+AL MH+ ++L LPV G VVGLVDVM++I G +G
Sbjct: 38 VTQMLANKRGDAALLVGPDGGLAGIVTDTDITRRVVAKHVDPSSTSVSAVMTASPTCVSMTDSAMDALATMVENHFRHLPVVDDNGAVVGLLDIAKCLNDAISKLERAQEKSGSAAEDAVKQMANL---------QGAGGAQAAMLQQLLGPLMSQAFGDKASPTLRSLLAGK-PATVVQPNTTLLEAGQVMAEARKAALVVEDGELVGIFGFKDMMSRAVAKELPLDLTNVSSVMTPNPESVSPETTVLEALQVMHDNKFLTLPVCETNGTVVGLVDVMDVIYGCGGVDG 318
BLAST of mRNA_C-australica_Contig_9690.1.1 vs. uniprot
Match: D7G6N9_ECTSI (Myosin 29 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G6N9_ECTSI) HSP 1 Score: 245 bits (626), Expect = 3.290e-70 Identity = 157/301 (52.16%), Postives = 192/301 (63.79%), Query Frame = 1
Query: 1 VAEAMASARSDACLLVSAEGSLAGIVTDNDMTRRVVAKGIDPEAT-VDAVMTSNPKCVHMDDSAMEALGVMVERHFRHLPVTGKDGTVTGLLDIAKCLYDAISRMERVAKKST---DDGDGSAAQM------AAMAQAMATGGR---RGMSAAQAAAMKAMMDKMFGGDGI-QTLDDVLASKGRAIFVRPGDSVRSAAEAMADCRKAVLVVERGVLVGIFTPKDMLNRVLAKNLSPDETMVSDVMTPNPDSVLPELTVLDALHQMHECRYLHLPVVTD-GGRVVGLVDVMEIINATVGKEG 858
VA M+ R+DA LL G + GIVTD+D+TRRV+A + P+ T V +MT+ P V MD+SAMEALG+M++ RHLPV G + GLLDIAKCLYDA+SR+E AKK DGDG A M A A G+ + A Q M AM +G QTL DVLASK + FVRP +VR AA +A +KAVLVVE G L GIFTPKDM+NRV+ K L+P T V VMTPNPD P +TV++AL QM E RYLHLPVV + G V+G+VDVMEI+ ATVG+EG
Sbjct: 2641 VATEMSLKRTDAALLTK-RGRVVGIVTDHDLTRRVIALDMPPDRTPVRDIMTAEPAMVSMDESAMEALGLMIQNKTRHLPVMDAQGKIGGLLDIAKCLYDAVSRLEHAAKKKALEEGDGDGEVGSGSTVMIGAVMEAAKAMKGKASPKNQQALQELMMLAMTGSETEREGTNQTLADVLASKDKPEFVRPRHTVREAASVIASQKKAVLVVEEGELAGIFTPKDMMNRVITKKLNPGTTAVFSVMTPNPDGADPSMTVVEALQQMCENRYLHLPVVDERSGAVLGVVDVMEIVQATVGQEG 2940
BLAST of mRNA_C-australica_Contig_9690.1.1 vs. uniprot
Match: A0A7S2W475_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2W475_9STRA) HSP 1 Score: 226 bits (576), Expect = 4.190e-70 Identity = 130/251 (51.79%), Postives = 169/251 (67.33%), Query Frame = 1
Query: 121 DPEATVDAVMTSNPKCVHMDDSAMEALGVMVERHFRHLPVTGKDGTVTGLLDIAKCLYDAISRMERVAKKSTDDGDGSAAQMAAMAQAMATGGRRGMSAAQAAAMKAM----MDKMFGGDGIQTLDDVLASKGRAIFVRPGDSVRSAAEAMADCRKAVLVV-ERGVLVGIFTPKDMLNRVLAKNLSPDETMVSDVMTPNPDSVLPELTVLDALHQMHECRYLHLPVVTDGGRVVGLVDVMEIINATVGKEG 858
DP + +MT NPKCV MDD A EAL +M++ HFRHLPV G++ +LDIAKC+YDAIS++E++ K GD S A AT G RGMS QAA M+AM M+KMFGG+ Q+L +L + + V P +VR A + MA +K V VV E G LVG+ T KDM NRVLAK LSPDET+V DVMTPNP++V PE ++L+ALH MH+ RYLHLPVV VG+VD M++++A++G+EG
Sbjct: 5 DPAEPISEIMTKNPKCVSMDDDATEALVMMMDNHFRHLPVLDASGSIVAVLDIAKCMYDAISKIEKLEKHGKGSGDVS------QAVKQATRGIRGMSVDQAAVMQAMLGPLMEKMFGGNA-QSLGTILEKRDFSDSVPPEMTVREAGKVMASIKKGVGVVDESGALVGLLTLKDMNNRVLAKGLSPDETLVQDVMTPNPEAVAPETSLLEALHIMHDQRYLHLPVVEGENTAVGVVDAMDVMHASMGEEG 248 The following BLAST results are available for this feature:
BLAST of mRNA_C-australica_Contig_9690.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-australica_Contig_9690.1.1 >prot_C-australica_Contig_9690.1.1 ID=prot_C-australica_Contig_9690.1.1|Name=mRNA_C-australica_Contig_9690.1.1|organism=Chrysoparadoxa australica CS_1217|type=polypeptide|length=282bp MASARSDACLLVSAEGSLAGIVTDNDMTRRVVAKGIDPEATVDAVMTSNPback to top mRNA from alignment at C-australica_Contig_9690:1..858+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-australica_Contig_9690.1.1 ID=mRNA_C-australica_Contig_9690.1.1|Name=mRNA_C-australica_Contig_9690.1.1|organism=Chrysoparadoxa australica CS_1217|type=mRNA|length=858bp|location=Sequence derived from alignment at C-australica_Contig_9690:1..858+ (Chrysoparadoxa australica CS_1217)back to top Coding sequence (CDS) from alignment at C-australica_Contig_9690:1..858+ >mRNA_C-australica_Contig_9690.1.1 ID=mRNA_C-australica_Contig_9690.1.1|Name=mRNA_C-australica_Contig_9690.1.1|organism=Chrysoparadoxa australica CS_1217|type=CDS|length=846bp|location=Sequence derived from alignment at C-australica_Contig_9690:1..858+ (Chrysoparadoxa australica CS_1217)back to top |