mRNA_C-australica_Contig_9690.1.1 (mRNA) Chrysoparadoxa australica CS_1217

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_C-australica_Contig_9690.1.1
Unique NamemRNA_C-australica_Contig_9690.1.1
TypemRNA
OrganismChrysoparadoxa australica CS_1217 (Chrysoparadoxa australica CS_1217)
Homology
BLAST of mRNA_C-australica_Contig_9690.1.1 vs. uniprot
Match: A0A836CBL7_9STRA (Myosin 29 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CBL7_9STRA)

HSP 1 Score: 353 bits (907), Expect = 6.560e-108
Identity = 196/291 (67.35%), Postives = 232/291 (79.73%), Query Frame = 1
Query:    1 VAEAMASARSDACLLVSAEGSLAGIVTDNDMTRRVVAKGIDPEATVDAVMTSNPKCVHMDDSAMEALGVMVERHFRHLPVTGKDGTVTGLLDIAKCLYDAISRMERV-AKKSTDDGDGSAAQMAA----MAQAMATGGRRGMSAAQAAAMKAMMDKMFGGDGIQTLDDVLASKGRAIFVRPGDSVRSAAEAMADCRKAVLVVERGVLVGIFTPKDMLNRVLAKNLSPDETMVSDVMTPNPDSVLPELTVLDALHQMHECRYLHLPVVTDGGRVVGLVDVMEIINATVGKEG 858
            VA AMA A+ DACLLV  +GSL GI+TDND+TRRV+AKGID E +V +VMT +P+CV M+DSAMEALGVM+ERHFRHLPVT   G VTG+LDIAKCLYDAI+R+ERV AK S+   D  + Q A     +  AM    R+GMS+AQAA M+ +M +MFG +G  +L DVL S G+A+FV P D+VR AA AMAD RKAV+VVERG LVGI TPKD+LNRVLAK+ SPD+T+VSDVMTPNPDSV  ++ VLDALHQMHE RYLHLPVV   GRV+GLVDVMEIINAT+GKEG
Sbjct: 1877 VAAAMAGAKVDACLLVGEDGSLHGIITDNDLTRRVIAKGIDVEDSVASVMTQSPRCVVMEDSAMEALGVMIERHFRHLPVTDASGAVTGVLDIAKCLYDAITRLERVMAKHSSHSQDLKSGQGAEALKQLTMAMKQHNRKGMSSAQAATMQMLMMQMFGDEGEPSLQDVLKSAGQAVFVSPRDTVRDAATAMADGRKAVVVVERGKLVGILTPKDLLNRVLAKDRSPDDTLVSDVMTPNPDSVPADMPVLDALHQMHEQRYLHLPVVDANGRVMGLVDVMEIINATIGKEG 2167          
BLAST of mRNA_C-australica_Contig_9690.1.1 vs. uniprot
Match: A0A7S3M8U3_9STRA (Hypothetical protein (Fragment) n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3M8U3_9STRA)

HSP 1 Score: 262 bits (669), Expect = 3.470e-82
Identity = 159/295 (53.90%), Postives = 209/295 (70.85%), Query Frame = 1
Query:    1 VAEAMASARSDACLLVSAEGSLAGIVTDNDMTRRVVAKG-IDPEATVDAVMTSNPKCVHMDDSAMEALGVMVERHFRHLPVTGKDGTVTGLLDIAKCLYDAISRMERVA----KKSTDDGDGSAAQMA-AMAQAM--ATGGRRGMSAAQAAAMKAMMDKMFGGDGIQTLDDVLASKGRAIFVRPGDSVRSAAEAMADCRKAVLVVE--RGV-LVGIFTPKDMLNRVLAKNLSPDETMVSDVMTPNPDSVLPELTVLDALHQMHECRYLHLPVVTDGGRVVGLVDVMEIINATVGK 852
            VA+ MA  R DA LL+ AEG+L+GI+TDND+TRRV+A   +  +  V AVMT NPKCV   DSA++AL +MV+  FRHLPV  + G V GLLDIAKCLYDAIS +E+V     + S  DG G+   MA AM +AM  A GGR G +  Q  A++AMM+ MFGG+ + TL  +L   G+   V PG ++  A++ MA+ RK VLV++  RG  L+GI TPKD+LNRV+AK LSPDET+VS+VMTPNPD V  +LT+L+AL +M+E +YLHLPV    GRV+G+VDVME++ +T G 
Sbjct:   54 VAKKMALNRVDAALLLDAEGALSGIITDNDVTRRVIAVSLVSSDTLVSAVMTKNPKCVQSADSALDALEMMVDNRFRHLPVMDEQGVVVGLLDIAKCLYDAISVLEKVQGGGEEGSEKDGAGTGNAMAKAMTEAMKKAAGGR-GTNKQQLLAIQAMMETMFGGE-VPTLRTILGGSGKVQSVLPGATITEASKLMAEMRKGVLVMDAKRGKELLGILTPKDLLNRVIAKGLSPDETLVSEVMTPNPDCVTGDLTLLEALREMYEHKYLHLPVREADGRVIGIVDVMELVCSTAGN 346          
BLAST of mRNA_C-australica_Contig_9690.1.1 vs. uniprot
Match: B7G2M6_PHATC (Predicted protein (Fragment) n=1 Tax=Phaeodactylum tricornutum (strain CCAP 1055/1) TaxID=556484 RepID=B7G2M6_PHATC)

HSP 1 Score: 253 bits (645), Expect = 4.090e-78
Identity = 152/291 (52.23%), Postives = 194/291 (66.67%), Query Frame = 1
Query:    1 VAEAMASARSDACLLVSAEGSLAGIVTDNDMTRRVVAKGIDPEAT-VDAVMTSNPKCVHMDDSAMEALGVMVERHFRHLPVTGKDGTVTGLLDIAKCLYDAISRMERVAKKSTDDGDGSAAQMAAMAQAMATGGRRGMSAAQAAAMKAM----MDKMFGGDGIQTLDDVLASKGRAIFVRPGDSVRSAAEAMADCRKAVLVVERGVLVGIFTPKDMLNRVLAKNLSPDETMVSDVMTPNPDSVLPELTVLDALHQMHECRYLHLPVVTDGGRVVGLVDVMEIINATVGKEG 858
            V++ ++S R  A L+VS +GSLAGI+TD D+TRRVVAK ID  AT V  VMT NP CV M DSAM+AL  MVE HFRHLPV    G+V GLLDIAKCL DAIS++ER ++K+    + +  QM A         ++G   AQAAA+KA+    M + FGG  + TL  +LA K     V P  S+R+    MAD RKA LVV+ G LVG+FT KDM++R +AK L  D T VS VMTP+P+ V P++TVL+AL  MH+ ++L LPV    GRVVGLVDVM++I+   G EG
Sbjct:   27 VSQTLSSKRGAASLVVSTDGSLAGIMTDTDITRRVVAKHIDTSATSVSEVMTPNPTCVAMSDSAMDALTTMVENHFRHLPVVDDQGSVVGLLDIAKCLNDAISKLERTSEKTNSAAEDAVKQMVA---------QQGAGGAQAAALKALLGNLMSQAFGGKQMPTLRSLLAGK-PGTLVDPSTSIRNCGLRMADSRKAALVVDDGELVGVFTFKDMMSRAVAKELDLDVTPVSQVMTPSPEFVSPDMTVLEALQSMHDNKFLTLPVCESDGRVVGLVDVMDVIHGCGGAEG 307          
BLAST of mRNA_C-australica_Contig_9690.1.1 vs. uniprot
Match: A0A7R9VL18_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9VL18_9STRA)

HSP 1 Score: 244 bits (624), Expect = 6.940e-76
Identity = 150/291 (51.55%), Postives = 189/291 (64.95%), Query Frame = 1
Query:    1 VAEAMASARSDACLLVSAEGSLAGIVTDNDMTRRVVAKGIDPEAT-VDAVMTSNPKCVHMDDSAMEALGVMVERHFRHLPVTGKDGTVTGLLDIAKCLYDAISRMERVAKKSTDDGDGSAAQMAAMAQAMATGGRRGMSAAQAAAMKAM----MDKMFGGDGIQTLDDVLASKGRAIFVRPGDSVRSAAEAMADCRKAVLVVERGVLVGIFTPKDMLNRVLAKNLSPDETMVSDVMTPNPDSVLPELTVLDALHQMHECRYLHLPVVTDGGRVVGLVDVMEIINATVGKEG 858
            V + +A+ R DA LLV  +G LAGIVTD D+TRRVVAK +DP +T V AVMT++P CV M DSAM+AL  MVE HFRHLPV   +G V GLLDIAKCL DAIS++ER  +KS    + +  QMA +         +G   AQAA ++ +    M + FG     TL  +LA K  A  V+P  ++  A + MA+ RKA LVVE G LVGIF  KDM++R +AK L  D T VS VMTPNP+SV PE TVL+AL  MH+ ++L LPV    G VVGLVDVM++I    G +G
Sbjct:   51 VTQMLANKRGDAALLVGPDGGLAGIVTDTDITRRVVAKHVDPSSTSVSAVMTASPTCVSMTDSAMDALATMVENHFRHLPVVDDNGAVVGLLDIAKCLNDAISKLERAQEKSGSAAEDAVKQMANL---------QGAGGAQAAMLQQLLGPLMSQAFGDKASPTLRSLLAGK-PATVVQPNTTLLEAGQVMAEARKAALVVEDGELVGIFGFKDMMSRAVAKELPLDLTNVSSVMTPNPESVSPETTVLEALQVMHDNKFLTLPVCETNGTVVGLVDVMDVIYGCGGVDG 331          
BLAST of mRNA_C-australica_Contig_9690.1.1 vs. uniprot
Match: A0A7S2PMW1_9STRA (Hypothetical protein (Fragment) n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2PMW1_9STRA)

HSP 1 Score: 244 bits (624), Expect = 8.030e-76
Identity = 152/292 (52.05%), Postives = 195/292 (66.78%), Query Frame = 1
Query:    1 VAEAMASARSDACLLVSAEGSLAGIVTDNDMTRRVVAKGIDPEAT-VDAVMTSNPKCVHMDDSAMEALGVMVERHFRHLPVTGKDGTVTGLLDIAKCLYDAISRMERVAKKSTDDGDGSAAQMAAMAQAMATGGRRGMSAAQAAAMKAM----MDKMFGGDG-IQTLDDVLASKGRAIFVRPGDSVRSAAEAMADCRKAVLVVERGVLVGIFTPKDMLNRVLAKNLSPDETMVSDVMTPNPDSVLPELTVLDALHQMHECRYLHLPVVTDGGRVVGLVDVMEIINATVGKEG 858
            V   +AS R DA L+ SA G LAGI+TD D+TRRVVAK I+PE+T + +VMT+NP CV M DSAM+ALG MVE HFRHLPV   +G V GLLDIAKCL DAIS++E+   +S  DG+ +A  +  MA     GG      AQAAA++A+    M + FG  G   TL  +LA K  A  V P  ++R     MA+ RKA LVVE G LVGIF  KDM++R +AK L  + T VS VMTP+P++V P++TVL+AL  MH+ ++L LPV  +GG VVG+VDVM++I    G EG
Sbjct:   45 VTRMLASKRGDAALITSANGGLAGIITDTDVTRRVVAKYIEPESTSISSVMTANPTCVAMSDSAMDALGTMVENHFRHLPVVDDNGGVVGLLDIAKCLNDAISKLEK--SESKKDGNAAADAVKQMASLQGAGG------AQAAALQALLGPLMAQAFGNTGGSPTLRSLLAGK-PATIVSPQTNLRDTGIKMAEARKASLVVEDGRLVGIFGFKDMMSRAVAKGLPLESTPVSQVMTPDPETVSPDITVLEALQLMHDNKFLTLPVCEEGGEVVGVVDVMDVIYGCGGAEG 327          
BLAST of mRNA_C-australica_Contig_9690.1.1 vs. uniprot
Match: A0A7S3M7R0_9STRA (Hypothetical protein (Fragment) n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3M7R0_9STRA)

HSP 1 Score: 239 bits (610), Expect = 2.140e-73
Identity = 143/288 (49.65%), Postives = 191/288 (66.32%), Query Frame = 1
Query:    1 VAEAMASARSDACLLVSAEGSLAGIVTDNDMTRRVVAKG-IDPEATVDAVMTSNPKCVHMDDSAMEALGVMVERHFRHLPVTGKDGTVTGLLDIAKCLYDAISRMERV-AKKSTDDGDGSAAQMAAMAQAM-ATGGRRGMSAAQAAAMKAMMDKMFGGDGIQTLDDVLASKGRAIFVRPGDSVRSAAEAMADCRKAVLVVERGV-LVGIFTPKDMLNRVLAKNLSPDETMVSDVMTPNPDSVLPELTVLDALHQMHECRYLHLPVVTDGGRVVGLVDVMEIINATVGK 852
            VA+ MA  R DA LL+ AEG+L+GI+TDND+TRRV+A   +  +  V AVMT NPKCV   DSA++AL +MV+  FRHLPV  + G V GLLD+AKCLYDAIS +E+V      D+ D SA     M  A+ + GG +  + AQ  AM+AMM ++FGG  + TL  ++        VR   ++R A   M + RK +LV++    LVGI TPKD+L RV+A + SPD T VS VMTPNPD V  +LT+L+AL +M+E +YLHLPV    GRV+G+VDVME++ +T G 
Sbjct:   54 VAKKMALNRVDAALLLDAEGALSGIITDNDVTRRVIAVSLVSSDTLVSAVMTKNPKCVQSADSALDALEMMVDNRFRHLPVMDEQGVVVGLLDVAKCLYDAISILEKVHGTDGADEADSSAVMAQVMTAALLSAGGAKHTNTAQVQAMQAMMAQVFGGS-VPTLRSIIGVGQALPSVRHTTNIREACAIMTEHRKGLLVLDEDEELVGIITPKDILTRVIAADKSPDITAVSSVMTPNPDCVTGDLTLLEALREMYEHKYLHLPVREADGRVIGIVDVMELVCSTAGN 340          
BLAST of mRNA_C-australica_Contig_9690.1.1 vs. uniprot
Match: C6JVY2_PHATR (Myosin 29 n=3 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=C6JVY2_PHATR)

HSP 1 Score: 253 bits (645), Expect = 9.100e-73
Identity = 152/291 (52.23%), Postives = 194/291 (66.67%), Query Frame = 1
Query:    1 VAEAMASARSDACLLVSAEGSLAGIVTDNDMTRRVVAKGIDPEAT-VDAVMTSNPKCVHMDDSAMEALGVMVERHFRHLPVTGKDGTVTGLLDIAKCLYDAISRMERVAKKSTDDGDGSAAQMAAMAQAMATGGRRGMSAAQAAAMKAM----MDKMFGGDGIQTLDDVLASKGRAIFVRPGDSVRSAAEAMADCRKAVLVVERGVLVGIFTPKDMLNRVLAKNLSPDETMVSDVMTPNPDSVLPELTVLDALHQMHECRYLHLPVVTDGGRVVGLVDVMEIINATVGKEG 858
            V++ ++S R  A L+VS +GSLAGI+TD D+TRRVVAK ID  AT V  VMT NP CV M DSAM+AL  MVE HFRHLPV    G+V GLLDIAKCL DAIS++ER ++K+    + +  QM A         ++G   AQAAA+KA+    M + FGG  + TL  +LA K     V P  S+R+    MAD RKA LVV+ G LVG+FT KDM++R +AK L  D T VS VMTP+P+ V P++TVL+AL  MH+ ++L LPV    GRVVGLVDVM++I+   G EG
Sbjct: 1814 VSQTLSSKRGAASLVVSTDGSLAGIMTDTDITRRVVAKHIDTSATSVSEVMTPNPTCVAMSDSAMDALTTMVENHFRHLPVVDDQGSVVGLLDIAKCLNDAISKLERTSEKTNSAAEDAVKQMVA---------QQGAGGAQAAALKALLGNLMSQAFGGKQMPTLRSLLAGK-PGTLVDPSTSIRNCGLRMADSRKAALVVDDGELVGVFTFKDMMSRAVAKELDLDVTPVSQVMTPSPEFVSPDMTVLEALQSMHDNKFLTLPVCESDGRVVGLVDVMDVIHGCGGAEG 2094          
BLAST of mRNA_C-australica_Contig_9690.1.1 vs. uniprot
Match: A0A7R9VME7_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9VME7_9STRA)

HSP 1 Score: 244 bits (624), Expect = 2.060e-72
Identity = 150/291 (51.55%), Postives = 189/291 (64.95%), Query Frame = 1
Query:    1 VAEAMASARSDACLLVSAEGSLAGIVTDNDMTRRVVAKGIDPEAT-VDAVMTSNPKCVHMDDSAMEALGVMVERHFRHLPVTGKDGTVTGLLDIAKCLYDAISRMERVAKKSTDDGDGSAAQMAAMAQAMATGGRRGMSAAQAAAMKAM----MDKMFGGDGIQTLDDVLASKGRAIFVRPGDSVRSAAEAMADCRKAVLVVERGVLVGIFTPKDMLNRVLAKNLSPDETMVSDVMTPNPDSVLPELTVLDALHQMHECRYLHLPVVTDGGRVVGLVDVMEIINATVGKEG 858
            V + +A+ R DA LLV  +G LAGIVTD D+TRRVVAK +DP +T V AVMT++P CV M DSAM+AL  MVE HFRHLPV   +G V GLLDIAKCL DAIS++ER  +KS    + +  QMA +         +G   AQAA ++ +    M + FG     TL  +LA K  A  V+P  ++  A + MA+ RKA LVVE G LVGIF  KDM++R +AK L  D T VS VMTPNP+SV PE TVL+AL  MH+ ++L LPV    G VVGLVDVM++I    G +G
Sbjct:   38 VTQMLANKRGDAALLVGPDGGLAGIVTDTDITRRVVAKHVDPSSTSVSAVMTASPTCVSMTDSAMDALATMVENHFRHLPVVDDNGAVVGLLDIAKCLNDAISKLERAQEKSGSAAEDAVKQMANL---------QGAGGAQAAMLQQLLGPLMSQAFGDKASPTLRSLLAGK-PATVVQPNTTLLEAGQVMAEARKAALVVEDGELVGIFGFKDMMSRAVAKELPLDLTNVSSVMTPNPESVSPETTVLEALQVMHDNKFLTLPVCETNGTVVGLVDVMDVIYGCGGVDG 318          
BLAST of mRNA_C-australica_Contig_9690.1.1 vs. uniprot
Match: D7G6N9_ECTSI (Myosin 29 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G6N9_ECTSI)

HSP 1 Score: 245 bits (626), Expect = 3.290e-70
Identity = 157/301 (52.16%), Postives = 192/301 (63.79%), Query Frame = 1
Query:    1 VAEAMASARSDACLLVSAEGSLAGIVTDNDMTRRVVAKGIDPEAT-VDAVMTSNPKCVHMDDSAMEALGVMVERHFRHLPVTGKDGTVTGLLDIAKCLYDAISRMERVAKKST---DDGDGSAAQM------AAMAQAMATGGR---RGMSAAQAAAMKAMMDKMFGGDGI-QTLDDVLASKGRAIFVRPGDSVRSAAEAMADCRKAVLVVERGVLVGIFTPKDMLNRVLAKNLSPDETMVSDVMTPNPDSVLPELTVLDALHQMHECRYLHLPVVTD-GGRVVGLVDVMEIINATVGKEG 858
            VA  M+  R+DA LL    G + GIVTD+D+TRRV+A  + P+ T V  +MT+ P  V MD+SAMEALG+M++   RHLPV    G + GLLDIAKCLYDA+SR+E  AKK      DGDG           A M  A A  G+   +   A Q   M AM       +G  QTL DVLASK +  FVRP  +VR AA  +A  +KAVLVVE G L GIFTPKDM+NRV+ K L+P  T V  VMTPNPD   P +TV++AL QM E RYLHLPVV +  G V+G+VDVMEI+ ATVG+EG
Sbjct: 2641 VATEMSLKRTDAALLTK-RGRVVGIVTDHDLTRRVIALDMPPDRTPVRDIMTAEPAMVSMDESAMEALGLMIQNKTRHLPVMDAQGKIGGLLDIAKCLYDAVSRLEHAAKKKALEEGDGDGEVGSGSTVMIGAVMEAAKAMKGKASPKNQQALQELMMLAMTGSETEREGTNQTLADVLASKDKPEFVRPRHTVREAASVIASQKKAVLVVEEGELAGIFTPKDMMNRVITKKLNPGTTAVFSVMTPNPDGADPSMTVVEALQQMCENRYLHLPVVDERSGAVLGVVDVMEIVQATVGQEG 2940          
BLAST of mRNA_C-australica_Contig_9690.1.1 vs. uniprot
Match: A0A7S2W475_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2W475_9STRA)

HSP 1 Score: 226 bits (576), Expect = 4.190e-70
Identity = 130/251 (51.79%), Postives = 169/251 (67.33%), Query Frame = 1
Query:  121 DPEATVDAVMTSNPKCVHMDDSAMEALGVMVERHFRHLPVTGKDGTVTGLLDIAKCLYDAISRMERVAKKSTDDGDGSAAQMAAMAQAMATGGRRGMSAAQAAAMKAM----MDKMFGGDGIQTLDDVLASKGRAIFVRPGDSVRSAAEAMADCRKAVLVV-ERGVLVGIFTPKDMLNRVLAKNLSPDETMVSDVMTPNPDSVLPELTVLDALHQMHECRYLHLPVVTDGGRVVGLVDVMEIINATVGKEG 858
            DP   +  +MT NPKCV MDD A EAL +M++ HFRHLPV    G++  +LDIAKC+YDAIS++E++ K     GD S       A   AT G RGMS  QAA M+AM    M+KMFGG+  Q+L  +L  +  +  V P  +VR A + MA  +K V VV E G LVG+ T KDM NRVLAK LSPDET+V DVMTPNP++V PE ++L+ALH MH+ RYLHLPVV      VG+VD M++++A++G+EG
Sbjct:    5 DPAEPISEIMTKNPKCVSMDDDATEALVMMMDNHFRHLPVLDASGSIVAVLDIAKCMYDAISKIEKLEKHGKGSGDVS------QAVKQATRGIRGMSVDQAAVMQAMLGPLMEKMFGGNA-QSLGTILEKRDFSDSVPPEMTVREAGKVMASIKKGVGVVDESGALVGLLTLKDMNNRVLAKGLSPDETLVQDVMTPNPEAVAPETSLLEALHIMHDQRYLHLPVVEGENTAVGVVDAMDVMHASMGEEG 248          
The following BLAST results are available for this feature:
BLAST of mRNA_C-australica_Contig_9690.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A836CBL7_9STRA6.560e-10867.35Myosin 29 n=1 Tax=Tribonema minus TaxID=303371 Rep... [more]
A0A7S3M8U3_9STRA3.470e-8253.90Hypothetical protein (Fragment) n=1 Tax=Spumella e... [more]
B7G2M6_PHATC4.090e-7852.23Predicted protein (Fragment) n=1 Tax=Phaeodactylum... [more]
A0A7R9VL18_9STRA6.940e-7651.55Hypothetical protein (Fragment) n=1 Tax=Pseudictyo... [more]
A0A7S2PMW1_9STRA8.030e-7652.05Hypothetical protein (Fragment) n=1 Tax=Leptocylin... [more]
A0A7S3M7R0_9STRA2.140e-7349.65Hypothetical protein (Fragment) n=1 Tax=Spumella e... [more]
C6JVY2_PHATR9.100e-7352.23Myosin 29 n=3 Tax=Phaeodactylum tricornutum TaxID=... [more]
A0A7R9VME7_9STRA2.060e-7251.55Hypothetical protein (Fragment) n=1 Tax=Pseudictyo... [more]
D7G6N9_ECTSI3.290e-7052.16Myosin 29 n=1 Tax=Ectocarpus siliculosus TaxID=288... [more]
A0A7S2W475_9STRA4.190e-7051.79Hypothetical protein (Fragment) n=1 Tax=Rhizochrom... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-australica_Contig_9690contigC-australica_Contig_9690:1..858 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Chrysoparadoxa australica CS_1217 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog2850.Phatr13833
PFAMsCBS
Model size858
Max annot lvl2836|Bacillariophyta
Hectar predicted targeting categoryother localisation
Exons1
Evalue3.27e-78
EggNOG OGsCOG0517@1|root,2QVK2@2759|Eukaryota,2XAAV@2836|Bacillariophyta
DescriptionDomain in cystathionine beta-synthase and other proteins.
Cds size846
COG categoryS
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1682588834.9966729-UTR-C-australica_Contig_9690:0..121682588834.9966729-UTR-C-australica_Contig_9690:0..12Chrysoparadoxa australica CS_1217UTRC-australica_Contig_9690 1..12 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1682588835.0092807-CDS-C-australica_Contig_9690:12..8581682588835.0092807-CDS-C-australica_Contig_9690:12..858Chrysoparadoxa australica CS_1217CDSC-australica_Contig_9690 13..858 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_C-australica_Contig_9690.1.1prot_C-australica_Contig_9690.1.1Chrysoparadoxa australica CS_1217polypeptideC-australica_Contig_9690 13..858 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_C-australica_Contig_9690.1.1

>prot_C-australica_Contig_9690.1.1 ID=prot_C-australica_Contig_9690.1.1|Name=mRNA_C-australica_Contig_9690.1.1|organism=Chrysoparadoxa australica CS_1217|type=polypeptide|length=282bp
MASARSDACLLVSAEGSLAGIVTDNDMTRRVVAKGIDPEATVDAVMTSNP
KCVHMDDSAMEALGVMVERHFRHLPVTGKDGTVTGLLDIAKCLYDAISRM
ERVAKKSTDDGDGSAAQMAAMAQAMATGGRRGMSAAQAAAMKAMMDKMFG
GDGIQTLDDVLASKGRAIFVRPGDSVRSAAEAMADCRKAVLVVERGVLVG
IFTPKDMLNRVLAKNLSPDETMVSDVMTPNPDSVLPELTVLDALHQMHEC
RYLHLPVVTDGGRVVGLVDVMEIINATVGKEG
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mRNA from alignment at C-australica_Contig_9690:1..858+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_C-australica_Contig_9690.1.1 ID=mRNA_C-australica_Contig_9690.1.1|Name=mRNA_C-australica_Contig_9690.1.1|organism=Chrysoparadoxa australica CS_1217|type=mRNA|length=858bp|location=Sequence derived from alignment at C-australica_Contig_9690:1..858+ (Chrysoparadoxa australica CS_1217)
GTGGCTGAAGCAATGGCCTCGGCAAGATCTGATGCTTGCTTACTTGTCAG TGCAGAGGGCTCTTTGGCTGGTATTGTCACGGACAATGATATGACAAGGA GAGTTGTGGCCAAGGGCATTGATCCTGAAGCTACTGTGGATGCTGTCATG ACTAGCAATCCCAAGTGTGTTCACATGGATGATAGTGCCATGGAGGCTCT TGGAGTTATGGTTGAACGTCACTTCAGGCACCTTCCCGTGACTGGTAAGG ATGGAACAGTCACTGGCTTGCTGGATATTGCCAAGTGCTTGTATGATGCC ATCTCACGAATGGAACGAGTTGCAAAGAAGAGCACTGATGATGGTGACGG CAGTGCAGCTCAAATGGCAGCAATGGCACAAGCTATGGCAACTGGTGGTA GAAGGGGCATGAGTGCAGCACAAGCTGCAGCAATGAAAGCTATGATGGAC AAGATGTTTGGTGGAGATGGTATCCAGACTCTTGACGATGTACTTGCCAG TAAAGGACGGGCAATATTTGTTCGTCCTGGCGATAGCGTTCGATCTGCAG CAGAAGCAATGGCTGATTGCCGCAAGGCGGTCTTGGTGGTGGAGAGAGGT GTCTTGGTTGGTATCTTCACTCCCAAAGACATGCTGAACCGTGTACTGGC CAAGAATCTTTCACCAGATGAGACCATGGTGTCTGATGTAATGACGCCCA ACCCTGACAGCGTGTTGCCAGAGCTCACTGTACTTGATGCATTGCATCAA ATGCATGAGTGCAGGTATCTGCACTTGCCAGTTGTCACTGATGGAGGAAG GGTTGTGGGCTTGGTTGATGTGATGGAGATTATCAACGCTACAGTTGGCA AGGAGGGC
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Coding sequence (CDS) from alignment at C-australica_Contig_9690:1..858+

>mRNA_C-australica_Contig_9690.1.1 ID=mRNA_C-australica_Contig_9690.1.1|Name=mRNA_C-australica_Contig_9690.1.1|organism=Chrysoparadoxa australica CS_1217|type=CDS|length=846bp|location=Sequence derived from alignment at C-australica_Contig_9690:1..858+ (Chrysoparadoxa australica CS_1217)
ATGGCCTCGGCAAGATCTGATGCTTGCTTACTTGTCAGTGCAGAGGGCTC
TTTGGCTGGTATTGTCACGGACAATGATATGACAAGGAGAGTTGTGGCCA
AGGGCATTGATCCTGAAGCTACTGTGGATGCTGTCATGACTAGCAATCCC
AAGTGTGTTCACATGGATGATAGTGCCATGGAGGCTCTTGGAGTTATGGT
TGAACGTCACTTCAGGCACCTTCCCGTGACTGGTAAGGATGGAACAGTCA
CTGGCTTGCTGGATATTGCCAAGTGCTTGTATGATGCCATCTCACGAATG
GAACGAGTTGCAAAGAAGAGCACTGATGATGGTGACGGCAGTGCAGCTCA
AATGGCAGCAATGGCACAAGCTATGGCAACTGGTGGTAGAAGGGGCATGA
GTGCAGCACAAGCTGCAGCAATGAAAGCTATGATGGACAAGATGTTTGGT
GGAGATGGTATCCAGACTCTTGACGATGTACTTGCCAGTAAAGGACGGGC
AATATTTGTTCGTCCTGGCGATAGCGTTCGATCTGCAGCAGAAGCAATGG
CTGATTGCCGCAAGGCGGTCTTGGTGGTGGAGAGAGGTGTCTTGGTTGGT
ATCTTCACTCCCAAAGACATGCTGAACCGTGTACTGGCCAAGAATCTTTC
ACCAGATGAGACCATGGTGTCTGATGTAATGACGCCCAACCCTGACAGCG
TGTTGCCAGAGCTCACTGTACTTGATGCATTGCATCAAATGCATGAGTGC
AGGTATCTGCACTTGCCAGTTGTCACTGATGGAGGAAGGGTTGTGGGCTT
GGTTGATGTGATGGAGATTATCAACGCTACAGTTGGCAAGGAGGGC
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