mRNA_C-australica_Contig_9.9.1 (mRNA) Chrysoparadoxa australica CS_1217

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_C-australica_Contig_9.9.1
Unique NamemRNA_C-australica_Contig_9.9.1
TypemRNA
OrganismChrysoparadoxa australica CS_1217 (Chrysoparadoxa australica CS_1217)
Homology
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BLAST of mRNA_C-australica_Contig_9.9.1 vs. uniprot
Match: D7FVV6_ECTSI (Prohibitin n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FVV6_ECTSI)

HSP 1 Score: 387 bits (994), Expect = 2.750e-133
Identity = 206/273 (75.46%), Postives = 240/273 (87.91%), Query Frame = 1 
Query:   28 DKALRAVAQAGTIVATSAAIGQFCLYNVDAGQRGVIFDRFSGVKDDVAGEGTHFLIPGIQTPIIMDVRARPRVINSVTGTKDLQMANISLRVLSRPDEKELPKIYKQLGTDFDDRVLPSIGNEVLKAVVAKYNAEELLSKRENVSERVRQEITARAKHFNLILDDISITHLTFGREFTKAIENKQVAQQEAERQVYVVAKSEQEKQAAIIRAEGEAEAAVLISKALKDSGVGLIEVRRIDAAKQVAETLASARNVTYLPSGQNQSMLLGLNNA 846
            +K L+ V++ G +VA +AA  + CL+NVD GQR VIFDRF GVK+ V GEGTHF+IP +Q PII+DVRARPR INS+TGTKDLQMANISLRVLSRP E ELP+IY++LGTDFDDRVLPS+GNEVLKAVVAKYNAEELLSKRE+VS R+R E+T RAK F+LI+DD+SITHLTFG EFTKAIENKQVAQQEAERQVYVVA S+QE+ AAIIRAEGEAEAA LIS ALK+SG+GLIEVRRID AK++A TLA++RN+TYLP+G   +MLLGLN A
Sbjct:    3 EKLLQNVSRLGGVVAIAAAT-EMCLFNVDGGQRAVIFDRFQGVKEAVVGEGTHFMIPIVQKPIIIDVRARPRTINSITGTKDLQMANISLRVLSRPLESELPRIYQELGTDFDDRVLPSLGNEVLKAVVAKYNAEELLSKRESVSTRIRDELTHRAKQFHLIMDDVSITHLTFGHEFTKAIENKQVAQQEAERQVYVVALSDQERLAAIIRAEGEAEAAELISAALKESGIGLIEVRRIDTAKEIALTLATSRNITYLPTGGGSNMLLGLNTA 274
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BLAST of mRNA_C-australica_Contig_9.9.1 vs. uniprot
Match: A0A835Z1F2_9STRA (Prohibitin n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z1F2_9STRA)

HSP 1 Score: 384 bits (987), Expect = 3.430e-132
Identity = 208/268 (77.61%), Postives = 232/268 (86.57%), Query Frame = 1 
Query:   28 DKALRAVAQAGTIVATSAAIGQFCLYNVDAGQRGVIFDRFSGVKDDVAGEGTHFLIPGIQTPIIMDVRARPRVINSVTGTKDLQMANISLRVLSRPDEKELPKIYKQLGTDFDDRVLPSIGNEVLKAVVAKYNAEELLSKRENVSERVRQEITARAKHFNLILDDISITHLTFGREFTKAIENKQVAQQEAERQVYVVAKSEQEKQAAIIRAEGEAEAAVLISKALKDSGVGLIEVRRIDAAKQVAETLASARNVTYLPSGQNQSMLL 831
            D+ L A  + G +VA +AA+   CLY VD G+R VIFDR +GVKDDV GEGTHFLIPG+QTPIIMDVR R RVINSVTGTKDLQ ANISLRVLSRPDE +L  I+KQLG D+DDRVLPS+GNEVLKAVVAKYNAEELLSKRE VS +VR+EI ARAK FNLILDD+SITHLTFGREFTKAIENKQVAQQEAERQVY+V KSEQE+QAA+IRAEGEAEAA LIS ALK SG GLIEVRRIDAAK++AETLA+ R VTYLP+GQ  + +L
Sbjct:    3 DRLLSAATRVGVLVAGAAAV-DLCLYTVDGGERAVIFDRLAGVKDDVVGEGTHFLIPGLQTPIIMDVRDRARVINSVTGTKDLQTANISLRVLSRPDEAKLALIFKQLGQDYDDRVLPSLGNEVLKAVVAKYNAEELLSKRETVSHQVREEIMARAKQFNLILDDVSITHLTFGREFTKAIENKQVAQQEAERQVYLVQKSEQERQAAVIRAEGEAEAADLISNALKSSGSGLIEVRRIDAAKEIAETLANGRGVTYLPAGQGGANML 269
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BLAST of mRNA_C-australica_Contig_9.9.1 vs. uniprot
Match: A0A7S2XWM3_9STRA (Prohibitin n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XWM3_9STRA)

HSP 1 Score: 348 bits (892), Expect = 9.540e-118
Identity = 186/274 (67.88%), Postives = 223/274 (81.39%), Query Frame = 1 
Query:   28 DKALRAVAQAGTIVATSAAIGQFCLYNVDAGQRGVIFDRFSGVKDDVAGEGTHFLIPGIQTPIIMDVRARPRVINSVTGTKDLQMANISLRVLSRPDEKELPKIYKQLGTDFDDRVLPSIGNEVLKAVVAKYNAEELLSKRENVSERVRQEITARAKHFNLILDDISITHLTFGREFTKAIENKQVAQQEAERQVYVVAKSEQEKQAAIIRAEGEAEAAVLISKALKDSGVGLIEVRRIDAAKQVAETLASARNVTYLPSGQN--QSMLLGLNN 843
            ++ L  + + G        + +FCL  VD GQR VIFD+F G+  D  GEG HFLIP IQ P I+D+RARPRVINSVTGTKDLQM NISLRVLSRP+E ++  I++ LGTDFD+RVLPS+GNEVLKA+VA+YNAE+LL KR+ VSE++R+ +  RA  FNLILDD+SITHLTFGRE+ KAIE+KQVAQQEAERQ YVVAK++QE++AAIIRAEGEAEAA LISKAL  SG GLIEVRRIDAA++VAE LA+AR VTYLP GQ   Q++LLGLNN
Sbjct:    3 ERVLGLLTKIGLAATAGGVVVKFCLVTVDGGQRAVIFDKFKGILPDSCGEGMHFLIPIIQEPHILDIRARPRVINSVTGTKDLQMVNISLRVLSRPEEDKISHIFRTLGTDFDERVLPSLGNEVLKAIVAQYNAEDLLRKRDEVSEKIREALRKRAGAFNLILDDVSITHLTFGREYAKAIESKQVAQQEAERQQYVVAKADQERKAAIIRAEGEAEAATLISKALAGSGSGLIEVRRIDAAREVAENLAAARGVTYLPGGQGGGQNILLGLNN 276
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BLAST of mRNA_C-australica_Contig_9.9.1 vs. uniprot
Match: F0Y523_AURAN (Prohibitin n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y523_AURAN)

HSP 1 Score: 339 bits (870), Expect = 2.330e-114
Identity = 188/275 (68.36%), Postives = 220/275 (80.00%), Query Frame = 1 
Query:   25 MDKALRAVAQAGTIVATSAAIGQFCLYNVDAGQRGVIFDRFSGVKDDVAGEGTHFLIPGIQTPIIMDVRARPRVINSVTGTKDLQMANISLRVLSRPDEKELPKIYKQLGTDFDDRVLPSIGNEVLKAVVAKYNAEELLSKRENVSERVRQEITARAKHFNLILDDISITHLTFGREFTKAIENKQVAQQEAERQVYVVAKSEQEKQAAIIRAEGEAEAAVLISKALKDSGVGLIEVRRIDAAKQVAETLASARNVTYLPSGQNQ---SMLLGLN 840
            M+K L  VA+ G  VA  + IG  CLYNV+ G R V+FD   GV      EGT F IP +QTPIIMD+R+RPR I SVTGTKDLQM NI LRVLSRP E+ LPKIY  LGT+FDDRVLPS+GNEVLK+VVA+YNA++LLS RE +S+++R  +T RA+ FNLILDD+SITHL FG+EFT AIE KQVAQQEAERQ YVVAK+EQEK+AAIIRAEGEAEAA  ISKAL+  G GLIEVRRIDAA++VAETL+ AR VTYLPSG ++   +MLLGLN
Sbjct:    1 MEKVLTGVARLGMGVAGVSFIGSNCLYNVEGGHRAVMFDNIRGVLPKPISEGTGFKIPVLQTPIIMDIRSRPREIKSVTGTKDLQMVNIYLRVLSRPREEALPKIYMTLGTNFDDRVLPSLGNEVLKSVVAQYNADQLLSMREQISQQIRSTLTKRAEAFNLILDDVSITHLVFGKEFTSAIEQKQVAQQEAERQTYVVAKAEQEKKAAIIRAEGEAEAAATISKALEQCGSGLIEVRRIDAAREVAETLSRARGVTYLPSGGDKGGSNMLLGLN 275
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BLAST of mRNA_C-australica_Contig_9.9.1 vs. uniprot
Match: A0A7S0T017_9STRA (Prohibitin n=1 Tax=Chromulina nebulosa TaxID=96789 RepID=A0A7S0T017_9STRA)

HSP 1 Score: 332 bits (851), Expect = 1.620e-111
Identity = 175/245 (71.43%), Postives = 207/245 (84.49%), Query Frame = 1 
Query:   97 CLYNVDAGQRGVIFDRFSGVKDDVAGEGTHFLIPGIQTPIIMDVRARPRVINSVTGTKDLQMANISLRVLSRPDEKELPKIYKQLGTDFDDRVLPSIGNEVLKAVVAKYNAEELLSKRENVSERVRQEITARAKHFNLILDDISITHLTFGREFTKAIENKQVAQQEAERQVYVVAKSEQEKQAAIIRAEGEAEAAVLISKALKDSGVGLIEVRRIDAAKQVAETLASARNVTYLPSGQNQSMLL 831
            C+Y+VDAG R VIFD+  G++D V GEGTHF IP IQ PIIMD+R+RPR+INS TGTKDLQM NISLRVLSRP+E +LP IYK LG DFDDR+LPS+GNEVLKAVVA+YNAEELLSKR +VS ++R E+  RA  FNLILDD+SITHLTFG EF KAIE+KQVAQQEAE Q Y+VAK++QE++AAII AEGEAEAA +ISKA+  +G GL+EVRRIDAAK+VA TLA  RNV YLP+G++ S  L
Sbjct:   25 CIYDVDAGTRAVIFDKVRGIQDKVVGEGTHFKIPIIQDPIIMDIRSRPRIINSSTGTKDLQMVNISLRVLSRPNESKLPLIYKTLGIDFDDRILPSLGNEVLKAVVAQYNAEELLSKRAHVSLQIRTELLERASKFNLILDDVSITHLTFGTEFAKAIEHKQVAQQEAETQAYLVAKADQERKAAIILAEGEAEAANMISKAMSAAGNGLVEVRRIDAAKEVAGTLAKGRNVIYLPNGKDGSNFL 269
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BLAST of mRNA_C-australica_Contig_9.9.1 vs. uniprot
Match: A0A7S3M2D1_9STRA (Prohibitin n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3M2D1_9STRA)

HSP 1 Score: 323 bits (829), Expect = 3.670e-108
Identity = 179/274 (65.33%), Postives = 214/274 (78.10%), Query Frame = 1 
Query:   40 RAVAQAGTIVATSAAIG---QFCLYNVDAGQRGVIFDRFSGVKDDVAGEGTHFLIPGIQTPIIMDVRARPRVINSVTGTKDLQMANISLRVLSRPDEKELPKIYKQLGTDFDDRVLPSIGNEVLKAVVAKYNAEELLSKRENVSERVRQEITARAKHFNLILDDISITHLTFGREFTKAIENKQVAQQEAERQVYVVAKSEQEKQAAIIRAEGEAEAAVLISKALKDSGVGLIEVRRIDAAKQVAETLASARNVTYLPS---GQNQSMLLGLNN 843
            R V  A TI   S   G   +F  Y+VDAG R VIFD+  G++  V GEGTHF IP IQ PIIMD+R+RPR I+SVTGTKDLQM NISLRVLSRP E +L  IY+ LGTDFDDRVLPS+GNEVLK+VVA+YNAEELLSKR  VS  +R+ +  RA  FNLILDD+SITHLTFG+EF +AIE+KQVAQQEAE Q YVVAK++QE++AA+IRAEGEAEAA LIS+A+  +G GLIEVRRID AK VA+ ++ +RN+TYLPS   G N  + +G NN
Sbjct:    3 RIVGAASTIAMASVVTGIAIEFFTYDVDAGNRAVIFDKIQGIQQTVKGEGTHFKIPFIQVPIIMDIRSRPRSIHSVTGTKDLQMVNISLRVLSRPKEDQLATIYQTLGTDFDDRVLPSLGNEVLKSVVAQYNAEELLSKRALVSHGIREALVERAAKFNLILDDVSITHLTFGKEFARAIEHKQVAQQEAETQAYVVAKADQERKAAVIRAEGEAEAANLISEAMLKAGNGLIEVRRIDTAKDVAQIVSRSRNITYLPSSKGGSNMLLNVGGNN 276
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BLAST of mRNA_C-australica_Contig_9.9.1 vs. uniprot
Match: A0A7S3LRB7_9STRA (Prohibitin n=2 Tax=Aplanochytrium stocchinoi TaxID=215587 RepID=A0A7S3LRB7_9STRA)

HSP 1 Score: 319 bits (817), Expect = 2.790e-106
Identity = 172/268 (64.18%), Postives = 212/268 (79.10%), Query Frame = 1 
Query:   37 LRAVAQAGTIVATSAAIGQFCLYNVDAGQRGVIFDRFSGVKDDVAGEGTHFLIPGIQTPIIMDVRARPRVINSVTGTKDLQMANISLRVLSRPDEKELPKIYKQLGTDFDDRVLPSIGNEVLKAVVAKYNAEELLSKRENVSERVRQEITARAKHFNLILDDISITHLTFGREFTKAIENKQVAQQEAERQVYVVAKSEQEKQAAIIRAEGEAEAAVLISKALKDSGVGLIEVRRIDAAKQVAETLASARNVTYLPSGQN-QSMLLGL 837
            L  VAQA   V     +GQ CLYNVD G+R VIF+RF GV+    GEGTH  IP I  P I D+R++PR+IN+ TGTKDLQM NI+LRVLSRPDE  LPKI++ +G DFD+RVLPSIGNEVLKAVVA+YNA++LL+ RE VS ++   +T RAK+F+LILDD+SITHLTFG++FT A+E KQVA Q+AER  +VV K+EQEK+ ++I AEGEAEAA LIS AL+ SG GLIEVRRIDA+K +AETLA +RNVTYLPSG+   +MLL +
Sbjct:   10 LTRVAQAALGVGLVGFVGQECLYNVDGGERAVIFNRFRGVEPKTIGEGTHLRIPMIDYPNIFDIRSKPRIINTTTGTKDLQMVNIALRVLSRPDEAMLPKIFQDIGKDFDERVLPSIGNEVLKAVVAQYNADQLLTMREKVSAQINDTLTQRAKNFHLILDDVSITHLTFGKDFTIAVEAKQVALQDAERSKFVVMKAEQEKKVSVIEAEGEAEAAQLISAALQKSGRGLIEVRRIDASKDIAETLAKSRNVTYLPSGKGGNNMLLNI 277
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BLAST of mRNA_C-australica_Contig_9.9.1 vs. uniprot
Match: W7TLA3_9STRA (Prohibitin n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TLA3_9STRA)

HSP 1 Score: 318 bits (815), Expect = 4.740e-106
Identity = 165/271 (60.89%), Postives = 215/271 (79.34%), Query Frame = 1 
Query:   25 MDKALRAVAQAGTIVATSAAIGQFCLYNVDAGQRGVIFDRFSGVKDDVAGEGTHFLIPGIQTPIIMDVRARPRVINSVTGTKDLQMANISLRVLSRPDEKELPKIYKQLGTDFDDRVLPSIGNEVLKAVVAKYNAEELLSKRENVSERVRQEITARAKHFNLILDDISITHLTFGREFTKAIENKQVAQQEAERQVYVVAKSEQEKQAAIIRAEGEAEAAVLISKALKDSGVGLIEVRRIDAAKQVAETLASARNVTYLPSGQNQSMLLGL 837
            M+  L  VA+ G  VA +A +G   L+NV+ G R V+FDRF GV      EGT  +IP +Q+  + DVR++PRVINSVTGTKDLQ  NISLRVLSRP E+ LP+I+ ++G DFD+RVLP +GNEVLKAVVA+YNAEELLSKRE +S+++R  +  RA+ F+LILDD+SITHLTF +EFTKAIE KQVA+Q+AERQ+Y+V +++QE++A +IRAEGEAEAA+ ISKA+ D G  LIE+RRIDAA+ +A+ L+ +RN+TYLP GQN  +LLGL
Sbjct:    1 MEALLGRVAKLGAGVAGAAFVGNNFLFNVEGGHRAVVFDRFKGVLPKPLAEGTSIVIPVLQSAFLFDVRSKPRVINSVTGTKDLQHVNISLRVLSRPVEQMLPEIFSKIGQDFDERVLPGVGNEVLKAVVAQYNAEELLSKREQISDQIRVNLIKRAREFHLILDDVSITHLTFSKEFTKAIEQKQVAEQDAERQMYIVQRADQERKAVVIRAEGEAEAAMKISKAVADFGTALIEIRRIDAARDIADILSKSRNITYLPGGQNSGLLLGL 271
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BLAST of mRNA_C-australica_Contig_9.9.1 vs. uniprot
Match: M1V582_CYAM1 (Prohibitin n=2 Tax=Cyanidiaceae TaxID=265316 RepID=M1V582_CYAM1)

HSP 1 Score: 318 bits (815), Expect = 6.220e-106
Identity = 164/276 (59.42%), Postives = 217/276 (78.62%), Query Frame = 1 
Query:    4 GKSVPGKMDKALRAVAQAGTIVATSAAIGQFCLYNVDAGQRGVIFDRFSGVKDDVAGEGTHFLIPGIQTPIIMDVRARPRVINSVTGTKDLQMANISLRVLSRPDEKELPKIYKQLGTDFDDRVLPSIGNEVLKAVVAKYNAEELLSKRENVSERVRQEITARAKHFNLILDDISITHLTFGREFTKAIENKQVAQQEAERQVYVVAKSEQEKQAAIIRAEGEAEAAVLISKALKDSGVGLIEVRRIDAAKQVAETLASARNVTYLPSGQNQSMLL 831
            G+    K+ K L   A+    +    ++ Q  LY V+ G R VIF+RF+GV+  V GEGTH  IP +Q PII DVR RPR I SVTGTKDLQM N++LRVLS+PD+++LP+IY +LG D+D+RVLPSIGNEVLKA+VA+YNAE+LL++RE VS ++R+ +TARAK F++ LDD+S+THLTFGREF +AIE KQVAQQEAER  Y+VA +EQE+QAAI RAEGE+EAA L+S+AL++SG G I++RRI+AA+++AETL+ A NV YLP+    ++LL
Sbjct:    5 GREAAAKLAKTLNTAAKYSIALGVLGSLLQTSLYTVEGGHRAVIFNRFTGVEQRVVGEGTHLRIPWVQKPIIYDVRTRPRTITSVTGTKDLQMVNLTLRVLSKPDKQQLPRIYSRLGVDYDERVLPSIGNEVLKAIVAQYNAEQLLTQREKVSRQIRETLTARAKSFDIELDDVSMTHLTFGREFAQAIEQKQVAQQEAERSRYIVAIAEQERQAAITRAEGESEAAALVSQALQESGAGFIQLRRIEAAREIAETLSKAPNVVYLPATHGTNILL 280
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BLAST of mRNA_C-australica_Contig_9.9.1 vs. uniprot
Match: A0A7S4EFZ4_9STRA (Prohibitin n=1 Tax=Pseudo-nitzschia australis TaxID=44445 RepID=A0A7S4EFZ4_9STRA)

HSP 1 Score: 316 bits (810), Expect = 3.450e-105
Identity = 171/266 (64.29%), Postives = 212/266 (79.70%), Query Frame = 1 
Query:   79 AAIGQF----CLYNVDAGQRGVIFDRF-SGVKDDVAGEGTHFLIPGIQTPIIMDVRARPRVINSVTGTKDLQMANISLRVLSRPDEKELPKIYKQLGTDFDDRVLPSIGNEVLKAVVAKYNAEELLSKRENVSERVRQEITARAKHFNLILDDISITHLTFGREFTKAIENKQVAQQEAERQVYVVAKSEQEKQAAIIRAEGEAEAAVLISKALKDSGVGLIEVRRIDAAKQVAETLASARNVTYLPS-------GQNQSMLLGLN 840
            A++G F    C+YNVD GQR V+FD+   G+  DV+GEGTHFLIP IQ PII D+R +PR I SVTGTKDLQM NI LRVL RP E ELP+IY++LGTDFD+RVLPSIGNEVLK++VA+YNA ELLSKR  VSER+R E+T RAK F+L  DD++ITHLTFGREF  AIE+KQVA QEAERQ +VV K+EQE+QA + RAEGEAEAA +I++A++ +G G+IEVRRIDAAK++A  LA++RNV YLP+       G   ++LLGL+
Sbjct:   16 ASVGAFTVNSCIYNVDGGQRAVMFDQLRGGILPDVSGEGTHFLIPMIQRPIIFDIRTKPREIPSVTGTKDLQMVNIKLRVLWRPTESELPQIYRELGTDFDERVLPSIGNEVLKSIVAQYNAVELLSKRAEVSERIRDEMTKRAKTFHLEFDDVAITHLTFGREFMTAIESKQVASQEAERQQWVVKKAEQERQAMVTRAEGEAEAATIITQAMEKTGNGIIEVRRIDAAKEIAGKLANSRNVVYLPNTGGSGGNGSGSNLLLGLD 281
The following BLAST results are available for this feature:
BLAST of mRNA_C-australica_Contig_9.9.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FVV6_ECTSI2.750e-13375.46Prohibitin n=2 Tax=Ectocarpus TaxID=2879 RepID=D7F... [more]
A0A835Z1F2_9STRA3.430e-13277.61Prohibitin n=1 Tax=Tribonema minus TaxID=303371 Re... [more]
A0A7S2XWM3_9STRA9.540e-11867.88Prohibitin n=1 Tax=Fibrocapsa japonica TaxID=94617... [more]
F0Y523_AURAN2.330e-11468.36Prohibitin n=1 Tax=Aureococcus anophagefferens Tax... [more]
A0A7S0T017_9STRA1.620e-11171.43Prohibitin n=1 Tax=Chromulina nebulosa TaxID=96789... [more]
A0A7S3M2D1_9STRA3.670e-10865.33Prohibitin n=1 Tax=Spumella elongata TaxID=89044 R... [more]
A0A7S3LRB7_9STRA2.790e-10664.18Prohibitin n=2 Tax=Aplanochytrium stocchinoi TaxID... [more]
W7TLA3_9STRA4.740e-10660.89Prohibitin n=2 Tax=Monodopsidaceae TaxID=425072 Re... [more]
M1V582_CYAM16.220e-10659.42Prohibitin n=2 Tax=Cyanidiaceae TaxID=265316 RepID... [more]
A0A7S4EFZ4_9STRA3.450e-10564.29Prohibitin n=1 Tax=Pseudo-nitzschia australis TaxI... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-australica_Contig_9contigC-australica_Contig_9:29942..31430 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Chrysoparadoxa australica CS_1217 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D7FVV6
Preferred namePHB
PFAMsBand_7
Model size860
Max annot lvl2759|Eukaryota
KEGG koko:K09228,ko:K17080
Hectar predicted targeting categoryother localisation
GOsGO:0000001,GO:0000003,GO:0000122,GO:0000302,GO:0000981,GO:0001067,GO:0001302,GO:0001541,GO:0001552,GO:0001558,GO:0001664,GO:0001666,GO:0001846,GO:0001848,GO:0001850,GO:0001851,GO:0001932,GO:0001933,GO:0001934,GO:0002082,GO:0002673,GO:0002682,GO:0002684,GO:0002697,GO:0002699,GO:0002920,GO:0002922,GO:0003006,GO:0003008,GO:0003674,GO:0003676,GO:0003677,GO:0003700,GO:0005102,GO:0005488,GO:0005515,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005730,GO:0005737,GO:0005739,GO:0005740,GO:0005741,GO:0005743,GO:0005746,GO:0005747,GO:0005768,GO:0005769,GO:0005773,GO:0005774,GO:0005886,GO:0005887,GO:0006139,GO:0006140,GO:0006259,GO:0006325,GO:0006355,GO:0006357,GO:0006457,GO:0006464,GO:0006476,GO:0006725,GO:0006807,GO:0006810,GO:0006811,GO:0006812,GO:0006816,GO:0006851,GO:0006950,GO:0006970,GO:0006979,GO:0006996,GO:0007005,GO:0007006,GO:0007007,GO:0007154,GO:0007165,GO:0007275,GO:0007276,GO:0007281,GO:0007283,GO:0007292,GO:0007548,GO:0007568,GO:0007569,GO:0007588,GO:0008022,GO:0008150,GO:0008152,GO:0008277,GO:0008285,GO:0008406,GO:0008585,GO:0009058,GO:0009059,GO:0009505,GO:0009507,GO:0009536,GO:0009628,GO:0009636,GO:0009651,GO:0009653,GO:0009719,GO:0009723,GO:0009725,GO:0009733,GO:0009755,GO:0009790,GO:0009791,GO:0009792,GO:0009889,GO:0009890,GO:0009891,GO:0009892,GO:0009893,GO:0009894,GO:0009895,GO:0009966,GO:0009967,GO:0009968,GO:0009986,GO:0009987,GO:0010033,GO:0010035,GO:0010243,GO:0010468,GO:0010556,GO:0010557,GO:0010558,GO:0010562,GO:0010563,GO:0010604,GO:0010605,GO:0010628,GO:0010629,GO:0010646,GO:0010647,GO:0010648,GO:0010941,GO:0010942,GO:0010944,GO:0010954,GO:0012505,GO:0014070,GO:0016020,GO:0016021,GO:0016043,GO:0016569,GO:0016570,GO:0016575,GO:0018130,GO:0019219,GO:0019220,GO:0019222,GO:0019438,GO:0019538,GO:0019866,GO:0019867,GO:0019898,GO:0019899,GO:0019953,GO:0022412,GO:0022414,GO:0022622,GO:0023051,GO:0023052,GO:0023056,GO:0023057,GO:0030001,GO:0030061,GO:0030154,GO:0030162,GO:0030308,GO:0030312,GO:0030421,GO:0030449,GO:0030518,GO:0030522,GO:0030964,GO:0031090,GO:0031099,GO:0031100,GO:0031224,GO:0031226,GO:0031312,GO:0031315,GO:0031323,GO:0031324,GO:0031325,GO:0031326,GO:0031327,GO:0031328,GO:0031347,GO:0031399,GO:0031400,GO:0031401,GO:0031410,GO:0031647,GO:0031871,GO:0031966,GO:0031967,GO:0031968,GO:0031974,GO:0031975,GO:0031981,GO:0031982,GO:0032101,GO:0032268,GO:0032269,GO:0032270,GO:0032501,GO:0032502,GO:0032504,GO:0032870,GO:0032989,GO:0032990,GO:0032991,GO:0033143,GO:0033144,GO:0033554,GO:0033993,GO:0034097,GO:0034220,GO:0034641,GO:0034645,GO:0034654,GO:0035601,GO:0035632,GO:0035902,GO:0036211,GO:0036293,GO:0036294,GO:0040008,GO:0040014,GO:0040018,GO:0042127,GO:0042176,GO:0042177,GO:0042221,GO:0042325,GO:0042326,GO:0042327,GO:0042493,GO:0042826,GO:0042981,GO:0043051,GO:0043066,GO:0043067,GO:0043069,GO:0043170,GO:0043209,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043401,GO:0043408,GO:0043409,GO:0043410,GO:0043412,GO:0043434,GO:0043467,GO:0044212,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044422,GO:0044424,GO:0044425,GO:0044428,GO:0044429,GO:0044437,GO:0044444,GO:0044446,GO:0044455,GO:0044459,GO:0044464,GO:0044703,GO:0045137,GO:0045271,GO:0045471,GO:0045745,GO:0045861,GO:0045862,GO:0045892,GO:0045893,GO:0045917,GO:0045926,GO:0045927,GO:0045934,GO:0045935,GO:0045936,GO:0045937,GO:0046483,GO:0046545,GO:0046660,GO:0046677,GO:0048232,GO:0048308,GO:0048311,GO:0048364,GO:0048468,GO:0048477,GO:0048513,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048527,GO:0048528,GO:0048545,GO:0048583,GO:0048584,GO:0048585,GO:0048608,GO:0048609,GO:0048638,GO:0048639,GO:0048731,GO:0048856,GO:0048869,GO:0050727,GO:0050776,GO:0050778,GO:0050789,GO:0050793,GO:0050794,GO:0050795,GO:0050821,GO:0050847,GO:0050896,GO:0051094,GO:0051128,GO:0051171,GO:0051172,GO:0051173,GO:0051174,GO:0051179,GO:0051234,GO:0051239,GO:0051240,GO:0051246,GO:0051247,GO:0051248,GO:0051252,GO:0051253,GO:0051254,GO:0051276,GO:0051301,GO:0051302,GO:0051640,GO:0051641,GO:0051646,GO:0051704,GO:0051716,GO:0051782,GO:0055085,GO:0060255,GO:0060259,GO:0060548,GO:0060765,GO:0060766,GO:0061024,GO:0061458,GO:0062012,GO:0065007,GO:0065008,GO:0070013,GO:0070372,GO:0070373,GO:0070374,GO:0070469,GO:0070482,GO:0070584,GO:0070588,GO:0070613,GO:0070741,GO:0070838,GO:0070887,GO:0071310,GO:0071345,GO:0071354,GO:0071383,GO:0071396,GO:0071407,GO:0071453,GO:0071456,GO:0071495,GO:0071704,GO:0071731,GO:0071840,GO:0071897,GO:0071944,GO:0072511,GO:0080090,GO:0080134,GO:0090304,GO:0090696,GO:0097159,GO:0097305,GO:0097366,GO:0097708,GO:0098588,GO:0098655,GO:0098660,GO:0098662,GO:0098732,GO:0098796,GO:0098798,GO:0098800,GO:0098803,GO:0098805,GO:0099402,GO:0140110,GO:1900542,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901576,GO:1901652,GO:1901698,GO:1901700,GO:1902494,GO:1902531,GO:1902532,GO:1902533,GO:1902679,GO:1902680,GO:1903317,GO:1903319,GO:1903506,GO:1903507,GO:1903508,GO:1903578,GO:1903998,GO:1990204,GO:2000112,GO:2000113,GO:2000257,GO:2000259,GO:2000322,GO:2000323,GO:2001141
Exons4
Evalue4.18e-134
EggNOG OGsCOG0330@1|root,KOG3083@2759|Eukaryota
Ec32 ortholog descriptionProhibitin complex subunit 1
Ec32 orthologEc-01_002300.1
Descriptionprohibitin
Cds size825
COG categoryO
BRITEko00000,ko03000,ko03029,ko04147
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_C-australica_Contig_9.9.1prot_C-australica_Contig_9.9.1Chrysoparadoxa australica CS_1217polypeptideC-australica_Contig_9 29966..31419 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1682588751.3854845-UTR-C-australica_Contig_9:29941..299651682588751.3854845-UTR-C-australica_Contig_9:29941..29965Chrysoparadoxa australica CS_1217UTRC-australica_Contig_9 29942..29965 +
1682588751.4352946-UTR-C-australica_Contig_9:31419..314301682588751.4352946-UTR-C-australica_Contig_9:31419..31430Chrysoparadoxa australica CS_1217UTRC-australica_Contig_9 31420..31430 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1682588751.3989205-CDS-C-australica_Contig_9:29965..300271682588751.3989205-CDS-C-australica_Contig_9:29965..30027Chrysoparadoxa australica CS_1217CDSC-australica_Contig_9 29966..30027 +
1682588751.4072976-CDS-C-australica_Contig_9:30307..306171682588751.4072976-CDS-C-australica_Contig_9:30307..30617Chrysoparadoxa australica CS_1217CDSC-australica_Contig_9 30308..30617 +
1682588751.4165237-CDS-C-australica_Contig_9:30730..309431682588751.4165237-CDS-C-australica_Contig_9:30730..30943Chrysoparadoxa australica CS_1217CDSC-australica_Contig_9 30731..30943 +
1682588751.4258285-CDS-C-australica_Contig_9:31179..314191682588751.4258285-CDS-C-australica_Contig_9:31179..31419Chrysoparadoxa australica CS_1217CDSC-australica_Contig_9 31180..31419 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_C-australica_Contig_9.9.1

>prot_C-australica_Contig_9.9.1 ID=prot_C-australica_Contig_9.9.1|Name=mRNA_C-australica_Contig_9.9.1|organism=Chrysoparadoxa australica CS_1217|type=polypeptide|length=275bp
MDKALRAVAQAGTIVATSAAIGQFCLYNVDAGQRGVIFDRFSGVKDDVAG
EGTHFLIPGIQTPIIMDVRARPRVINSVTGTKDLQMANISLRVLSRPDEK
ELPKIYKQLGTDFDDRVLPSIGNEVLKAVVAKYNAEELLSKRENVSERVR
QEITARAKHFNLILDDISITHLTFGREFTKAIENKQVAQQEAERQVYVVA
KSEQEKQAAIIRAEGEAEAAVLISKALKDSGVGLIEVRRIDAAKQVAETL
ASARNVTYLPSGQNQSMLLGLNNA*
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mRNA from alignment at C-australica_Contig_9:29942..31430+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_C-australica_Contig_9.9.1 ID=mRNA_C-australica_Contig_9.9.1|Name=mRNA_C-australica_Contig_9.9.1|organism=Chrysoparadoxa australica CS_1217|type=mRNA|length=1489bp|location=Sequence derived from alignment at C-australica_Contig_9:29942..31430+ (Chrysoparadoxa australica CS_1217)
GAGGGCAAATCCGTACCAGGGAAGATGGACAAGGCGTTGCGTGCTGTTGC
CCAGGCAGGGACAATCGTAGCTACCTCTGCCGCCATGTGAGTTGCTGGGG
ATGCTTGGTCCACAGGACCTTGAGTTGAGAAGAGGGCGTAAGGAAAGGAA
AGCAGGATGTTTGGTACTCCTAGATTAAGAGTCTTGCCCTGGGAGGGCTC
CTGGCTCGCATCGGATGTGAGCTCGAGGTTAGGTTAGGCTTTGCTGCTGG
CTGGCCCCTTCCGCATGTAGGGTGGGCGCGAATAAGCTTGGCAAGTGCCT
AATGGAGAAGGTCCATCCGCACCTTGCTTACCCAGTCCTAACATTCCCTC
CCTGAACACTTAACAGAGGACAGTTCTGCTTATACAATGTGGATGCGGGG
CAGCGGGGGGTGATTTTTGACAGGTTTTCAGGAGTAAAGGACGATGTGGC
TGGAGAGGGTACTCACTTCCTAATCCCGGGTATCCAGACGCCCATCATAA
TGGACGTACGGGCAAGACCGAGAGTGATCAACTCTGTGACGGGAACCAAG
GACTTGCAGATGGCAAACATCAGCCTTCGTGTGTTGAGTCGCCCTGATGA
GAAGGAGCTCCCTAAGATATACAAGCAGCTGGGGACAGACTTTGATGACA
GGGTGCTGCCTTCCATTGGAAATGAGGTGAGTTAGCCAACTTTTGGTGTG
AGAGGGAACTATTTGGGAGTAGTATAGTGCAATATTGACACATGACTCCC
CTACTTCCACTGAGGCTCTCGCTTCTCAACTCTCTTCAGGTTCTTAAGGC
AGTAGTTGCCAAGTATAATGCAGAGGAGCTGCTTAGTAAGCGTGAGAATG
TGAGCGAGAGAGTCAGGCAGGAGATCACCGCGCGGGCCAAGCACTTCAAC
CTGATCCTTGATGACATCAGCATCACCCACCTCACCTTTGGGAGAGAGTT
CACGAAGGCCATTGAGAATAAGCAGGTGGCACAGCAGGAGGCTGAACGAC
AGGTACGAAGAGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGAAACTT
AAGAGGGCATGAGAGCTCCTGGGAGGCTGGAGGCCACCTGATCTCTCAGT
CCTGCAGCTGAATTGCACCTCAAGTTACTGAATGTCTCTGCTTTGTTCTC
CTCCTCTACTCTACATTACTCAGCGCAGCAACATGTCATGCTTGCCATGC
CTTACTTGACTCTCTACCTCACTGCATTGCCGCCCCAGGTGTATGTAGTT
GCAAAGTCAGAGCAGGAGAAGCAGGCGGCCATCATCCGAGCAGAGGGAGA
GGCAGAGGCAGCCGTGCTCATCAGCAAGGCTCTCAAGGACAGTGGAGTTG
GGCTGATTGAAGTGAGGCGCATTGATGCTGCCAAGCAGGTGGCAGAGACG
CTGGCCAGTGCACGCAACGTCACGTACCTACCAAGTGGGCAGAACCAGTC
AATGCTCTTGGGCTTGAATAATGCATAGCTTTTGCATAC
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Coding sequence (CDS) from alignment at C-australica_Contig_9:29942..31430+

>mRNA_C-australica_Contig_9.9.1 ID=mRNA_C-australica_Contig_9.9.1|Name=mRNA_C-australica_Contig_9.9.1|organism=Chrysoparadoxa australica CS_1217|type=CDS|length=825bp|location=Sequence derived from alignment at C-australica_Contig_9:29942..31430+ (Chrysoparadoxa australica CS_1217)
ATGGACAAGGCGTTGCGTGCTGTTGCCCAGGCAGGGACAATCGTAGCTAC
CTCTGCCGCCATAGGACAGTTCTGCTTATACAATGTGGATGCGGGGCAGC
GGGGGGTGATTTTTGACAGGTTTTCAGGAGTAAAGGACGATGTGGCTGGA
GAGGGTACTCACTTCCTAATCCCGGGTATCCAGACGCCCATCATAATGGA
CGTACGGGCAAGACCGAGAGTGATCAACTCTGTGACGGGAACCAAGGACT
TGCAGATGGCAAACATCAGCCTTCGTGTGTTGAGTCGCCCTGATGAGAAG
GAGCTCCCTAAGATATACAAGCAGCTGGGGACAGACTTTGATGACAGGGT
GCTGCCTTCCATTGGAAATGAGGTTCTTAAGGCAGTAGTTGCCAAGTATA
ATGCAGAGGAGCTGCTTAGTAAGCGTGAGAATGTGAGCGAGAGAGTCAGG
CAGGAGATCACCGCGCGGGCCAAGCACTTCAACCTGATCCTTGATGACAT
CAGCATCACCCACCTCACCTTTGGGAGAGAGTTCACGAAGGCCATTGAGA
ATAAGCAGGTGGCACAGCAGGAGGCTGAACGACAGGTGTATGTAGTTGCA
AAGTCAGAGCAGGAGAAGCAGGCGGCCATCATCCGAGCAGAGGGAGAGGC
AGAGGCAGCCGTGCTCATCAGCAAGGCTCTCAAGGACAGTGGAGTTGGGC
TGATTGAAGTGAGGCGCATTGATGCTGCCAAGCAGGTGGCAGAGACGCTG
GCCAGTGCACGCAACGTCACGTACCTACCAAGTGGGCAGAACCAGTCAAT
GCTCTTGGGCTTGAATAATGCATAG
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