mRNA_C-australica_Contig_10445.1.1 (mRNA) Chrysoparadoxa australica CS_1217
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Overview
Homology
BLAST of mRNA_C-australica_Contig_10445.1.1 vs. uniprot
Match: UPI001FF15E2D (right-handed parallel beta-helix repeat-containing protein n=1 Tax=Muricauda sp. F6463D TaxID=2926409 RepID=UPI001FF15E2D) HSP 1 Score: 135 bits (339), Expect = 2.670e-34 Identity = 65/128 (50.78%), Postives = 90/128 (70.31%), Query Frame = 1
Query: 10 EMRTSILIIFCFLATLPGAIS-----QSDKTDIYVSPVGSDANPGTMELPLLTLKGARDHVRQIKALARGDVNVWFRRGEYFLNETVVFSLEDSGNDDLAITYSAYPGEKPVFSSGKEIKGWEKVNND 378
+++T I FL + + S +++KT+IYVSP G+DANPGT ELPL TL A++HVR+IK+ +GD+NVW R G+Y L+ETVVF LEDSG + I Y AYP EKPVF+S IK W+K++++
Sbjct: 5 KIKTDKNFILLFLTVIVISFSACNNEKNNKTNIYVSPQGNDANPGTKELPLATLNAAKNHVRKIKSSTKGDINVWLRGGKYNLDETVVFGLEDSGEGESMIIYQAYPDEKPVFTSDVPIKSWKKLDSE 132
BLAST of mRNA_C-australica_Contig_10445.1.1 vs. uniprot
Match: A0A2E1AWH9_9FLAO (Peptidase n=1 Tax=Muricauda sp. TaxID=192149 RepID=A0A2E1AWH9_9FLAO) HSP 1 Score: 118 bits (295), Expect = 2.530e-28 Identity = 66/137 (48.18%), Postives = 85/137 (62.04%), Query Frame = 1
Query: 13 MRTSILIIFCFLATLP---GAISQSDKT---DIYVSPVGSDANPGTM--------ELPLLTLKGARDHVRQIKALARGDVNVWFRRGEYFLNETVVFSLEDSGNDDLAITYSAYPGEKPVFSSGKEIKGWEKVNNDL 381
M SI I +A + G I+Q+D+T D YVSP GSD GT+ + P TL+ ARD VR++K A D+ V R G Y L ET+VF LEDSG ++ +ITY+AYPGE+P+FSSG+EI GW KV DL
Sbjct: 1 MLKSIFAIVFLIAGISFSHGQITQADQTKKADFYVSPTGSDNWSGTLSEPNALGTDGPFATLEAARDAVRELKKSADKDILVLVRNGIYILRETIVFGLEDSGTENASITYAAYPGEQPIFSSGQEITGWTKVTQDL 137
BLAST of mRNA_C-australica_Contig_10445.1.1 vs. uniprot
Match: UPI001C0EBB59 (hypothetical protein n=1 Tax=Formosa algae TaxID=225843 RepID=UPI001C0EBB59) HSP 1 Score: 109 bits (272), Expect = 5.090e-28 Identity = 63/126 (50.00%), Postives = 78/126 (61.90%), Query Frame = 1
Query: 25 ILIIFCFLATLPG-AISQSD-KTDIYVSPVGSDANPGTMELP--------LLTLKGARDHVRQIKALARGDVNVWFRRGEYFLNETVVFSLEDSGNDDLAITYSAYPGEKPVFSSGKEIKGWEKVN 372
I+++ C A+ G A S++D K D YVS GSD GT+E P TL+ ARD VR +K + D+ V R G Y L ETVVF LEDSG D+ ITY+AYPGE PVFSSG+EI W+K N
Sbjct: 16 IIVLACITASCNGIAQSKTDNKADFYVSTEGSDNWSGTLEKPNAKGTDGPFATLEQARDAVRLLKKSKQIDIKVLIREGVYPLKETVVFGLEDSGEDESIITYAAYPGETPVFSSGQEINDWKKCN 141
BLAST of mRNA_C-australica_Contig_10445.1.1 vs. uniprot
Match: A0A6N4WV44_9BACT (Unannotated n=3 Tax=Lentimonas TaxID=417293 RepID=A0A6N4WV44_9BACT) HSP 1 Score: 115 bits (288), Expect = 2.240e-27 Identity = 64/140 (45.71%), Postives = 82/140 (58.57%), Query Frame = 1
Query: 1 TNLEMRTSI---LIIFCFLATLPGAISQSD--KTDIYVSPVGSDANPGTM--------ELPLLTLKGARDHVRQIKALARGDVNVWFRRGEYFLNETVVFSLEDSGNDDLAITYSAYPGEKPVFSSGKEIKGWEKVNNDL 381
TN+ + S L + + L ++ +D + D Y P GSDA GT+ + P TL+ ARD VR +K GD+ V R G Y L+ETVVF LEDSG+ + ITY+AYPGE PVFSSGKEIKGW+KV L
Sbjct: 3 TNVALSASYPMQLYLILIITLLVSSVCNADSIQADFYCHPQGSDAWSGTLAEPNMTGTDGPFATLERARDAVRGLKQRQSGDIQVLLRGGTYLLSETVVFGLEDSGSSESTITYAAYPGETPVFSSGKEIKGWKKVTGSL 142
BLAST of mRNA_C-australica_Contig_10445.1.1 vs. uniprot
Match: UPI001C068FE5 (right-handed parallel beta-helix repeat-containing protein n=2 Tax=Flavobacteriaceae TaxID=49546 RepID=UPI001C068FE5) HSP 1 Score: 114 bits (286), Expect = 4.160e-27 Identity = 60/127 (47.24%), Postives = 78/127 (61.42%), Query Frame = 1
Query: 25 ILIIFCFLATLPGAISQSDKTDIYVSPVGSDANPGTMELPLL--------TLKGARDHVRQIKALARGDVNVWFRRGEYFLNETVVFSLEDSGNDDLAITYSAYPGEKPVFSSGKEIKGWEKVNNDL 381
+L + A +S + D YVS GSD GT+E P L TL+ ARD VR++K D+ V+ R G Y L ETVVF L+DSG D+L+ITY AYPGE P+FSSG+EI GW+KV +D+
Sbjct: 8 LLTLIISFACNSSDMSAQNNADFYVSTQGSDDWSGTLETPNLEGTDGPFATLERARDAVRKLKKKKSDDITVFIREGVYPLKETVVFGLKDSGEDNLSITYEAYPGETPIFSSGQEINGWKKVTDDI 134
BLAST of mRNA_C-australica_Contig_10445.1.1 vs. uniprot
Match: UPI001FF130A0 (right-handed parallel beta-helix repeat-containing protein n=1 Tax=Cellulophaga sp. F20128 TaxID=2926413 RepID=UPI001FF130A0) HSP 1 Score: 114 bits (286), Expect = 4.180e-27 Identity = 61/134 (45.52%), Postives = 79/134 (58.96%), Query Frame = 1
Query: 13 MRTSILIIFCFLATLPGAISQSD---KTDIYVSPVGSDANPGTM--------ELPLLTLKGARDHVRQIKALARGDVNVWFRRGEYFLNETVVFSLEDSGNDDLAITYSAYPGEKPVFSSGKEIKGWEKVNNDL 381
M+ +++I + +SQ+ K D+Y+S GSD GT+ + P TL ARD VR +K + V R G Y LN+TVVF LEDSG + ITY+AYPGEKPVFSSGKEIKGW+KV +L
Sbjct: 1 MKRQLILILTLMFGSFNCVSQTSLNSKADLYISTKGSDTWSGTLASPNSQKTDGPFATLARARDEVRHLKKRKSEHIVVHIREGNYLLNKTVVFGLEDSGEGEYTITYAAYPGEKPVFSSGKEIKGWKKVTTEL 134
BLAST of mRNA_C-australica_Contig_10445.1.1 vs. uniprot
Match: A0A6C2U7S0_9BACT (Beta_helix domain-containing protein n=1 Tax=Pontiella desulfatans TaxID=2750659 RepID=A0A6C2U7S0_9BACT) HSP 1 Score: 114 bits (284), Expect = 7.780e-27 Identity = 59/127 (46.46%), Postives = 77/127 (60.63%), Query Frame = 1
Query: 25 ILIIFCFLATLPGAISQSDKTDIYVSPVGSDANPGTM--------ELPLLTLKGARDHVRQIKALARGDVNVWFRRGEYFLNETVVFSLEDSGNDDLAITYSAYPGEKPVFSSGKEIKGWEKVNNDL 381
++++ L G + D Y+SP GSDA GT+ + P TL+ ARD VR +K D+ V R G Y L +TVVF LEDSG+D +ITY+AYPGE PVFSSG+EIKGW+KV+ L
Sbjct: 8 LILLGMLLLVSVGGFAAPPPADFYLSPNGSDAWSGTLAEPNAQGTDGPFATLERARDAVRTLKKSTSADIEVLVREGTYLLEKTVVFGLEDSGDDTRSITYAAYPGETPVFSSGREIKGWKKVSGRL 134
BLAST of mRNA_C-australica_Contig_10445.1.1 vs. uniprot
Match: A0A2K2ZEF5_9FLAO (Peptidase n=2 Tax=Formosa algae TaxID=225843 RepID=A0A2K2ZEF5_9FLAO) HSP 1 Score: 113 bits (283), Expect = 1.060e-26 Identity = 60/134 (44.78%), Postives = 81/134 (60.45%), Query Frame = 1
Query: 13 MRTSILIIFCFLATLPGAISQSD---KTDIYVSPVGSDANPGTMELP--------LLTLKGARDHVRQIKALARGDVNVWFRRGEYFLNETVVFSLEDSGNDDLAITYSAYPGEKPVFSSGKEIKGWEKVNNDL 381
M+ ++ +F + +++Q++ K D YVS GSD+ GT+ P TL+ ARD VR +K D+ V+ R G Y LN+TVVF LEDSG + ITY+AYPGE PVFSSGKEI GW+KV D+
Sbjct: 1 MKHYLIFMFTLIIISMTSVAQTESAEKADFYVSTKGSDSWSGTLSAPNAKGSDGPFATLERARDAVRDLKKKTSKDITVFVRDGVYQLNKTVVFDLEDSGEGESTITYAAYPGETPVFSSGKEINGWKKVTTDI 134
BLAST of mRNA_C-australica_Contig_10445.1.1 vs. uniprot
Match: UPI0018EECB93 (hypothetical protein n=1 Tax=Cellulophaga sp. L1A9 TaxID=2686362 RepID=UPI0018EECB93) HSP 1 Score: 104 bits (259), Expect = 8.490e-26 Identity = 56/108 (51.85%), Postives = 66/108 (61.11%), Query Frame = 1
Query: 82 KTDIYVSPVGSDANPGTMELP--------LLTLKGARDHVRQIKALARGDVNVWFRRGEYFLNETVVFSLEDSGNDDLAITYSAYPGEKPVFSSGKEIKGWEKVNNDL 381
D YVS GSDA GT++ P TL A++ VR +K D+ V R G Y LN+TVVF LEDSG ITY+AYP EKPVFSSGKEI+GWEKV D+
Sbjct: 30 NADFYVSTSGSDAWSGTLDRPNSQGTDGPFATLDQAKNAVRTLKKSKSQDIVVLIRDGIYKLNKTVVFGLEDSGEGKSTITYAAYPSEKPVFSSGKEIQGWEKVTTDI 137
BLAST of mRNA_C-australica_Contig_10445.1.1 vs. uniprot
Match: A0A1B1Y5P3_9FLAO (Peptidase n=1 Tax=Wenyingzhuangia fucanilytica TaxID=1790137 RepID=A0A1B1Y5P3_9FLAO) HSP 1 Score: 110 bits (276), Expect = 9.350e-26 Identity = 63/127 (49.61%), Postives = 75/127 (59.06%), Query Frame = 1
Query: 25 ILIIFCFLATLPGAISQSDKTDIYVSPVGSD------ANPGTM--ELPLLTLKGARDHVRQIKALARGDVNVWFRRGEYFLNETVVFSLEDSGNDDLAITYSAYPGEKPVFSSGKEIKGWEKVNNDL 381
IL I L +QS K D Y+S GSD A+P + P TL A++ VR +K D+ V R G Y LN TVVF LEDSG +D+ ITY+AYPGE PVFSSGKEIKGWEKV D+
Sbjct: 4 ILFISLMLVVSISCFAQS-KADFYISTEGSDDWSGKLASPNEQGTDGPFATLTHAKEAVRTLKKTKLTDIIVLIREGVYKLNNTVVFGLEDSGQEDMTITYAAYPGETPVFSSGKEIKGWEKVTKDI 129 The following BLAST results are available for this feature:
BLAST of mRNA_C-australica_Contig_10445.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-australica_Contig_10445.1.1 >prot_C-australica_Contig_10445.1.1 ID=prot_C-australica_Contig_10445.1.1|Name=mRNA_C-australica_Contig_10445.1.1|organism=Chrysoparadoxa australica CS_1217|type=polypeptide|length=124bp MRTSILIIFCFLATLPGAISQSDKTDIYVSPVGSDANPGTMELPLLTLKGback to top mRNA from alignment at C-australica_Contig_10445:54..437- Legend: UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-australica_Contig_10445.1.1 ID=mRNA_C-australica_Contig_10445.1.1|Name=mRNA_C-australica_Contig_10445.1.1|organism=Chrysoparadoxa australica CS_1217|type=mRNA|length=384bp|location=Sequence derived from alignment at C-australica_Contig_10445:54..437- (Chrysoparadoxa australica CS_1217)back to top Coding sequence (CDS) from alignment at C-australica_Contig_10445:54..437- >mRNA_C-australica_Contig_10445.1.1 ID=mRNA_C-australica_Contig_10445.1.1|Name=mRNA_C-australica_Contig_10445.1.1|organism=Chrysoparadoxa australica CS_1217|type=CDS|length=372bp|location=Sequence derived from alignment at C-australica_Contig_10445:54..437- (Chrysoparadoxa australica CS_1217)back to top |