mRNA_C-australica_Contig_10395.1.1 (mRNA) Chrysoparadoxa australica CS_1217
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Overview
Homology
BLAST of mRNA_C-australica_Contig_10395.1.1 vs. uniprot
Match: A0A222E6A2_9RHOB (NADH dehydrogenase subunit E n=3 Tax=Roseobacteraceae TaxID=2854170 RepID=A0A222E6A2_9RHOB) HSP 1 Score: 253 bits (646), Expect = 4.020e-85 Identity = 128/130 (98.46%), Postives = 130/130 (100.00%), Query Frame = 1
Query: 1 MRLFLTPILCLTLATPVWAKTPLSQVSEIDDGLMAIAIADEIRKNCDDISARMIRAYRQIQALEKRAKALGYSDDEIDTYVNSSAEKKRMRKKAETWLASKGVAASDEKALCKFGRDDIARGGPVGFFLR 390
MRLFLTPILCLTLATPVWAKTPL+QVSEIDDGLMAIAIADEIRKNC+DISARMIRAYRQIQALEKRAKALGYSDDEIDTYVNSSAEKKRMRKKAETWLASKGVAASDEKALCKFGRDDIARGGPVGFFLR
Sbjct: 1 MRLFLTPILCLTLATPVWAKTPLNQVSEIDDGLMAIAIADEIRKNCNDISARMIRAYRQIQALEKRAKALGYSDDEIDTYVNSSAEKKRMRKKAETWLASKGVAASDEKALCKFGRDDIARGGPVGFFLR 130
BLAST of mRNA_C-australica_Contig_10395.1.1 vs. uniprot
Match: A0A0B3S6N0_9RHOB (Uncharacterized protein n=2 Tax=Mameliella TaxID=1434019 RepID=A0A0B3S6N0_9RHOB) HSP 1 Score: 201 bits (512), Expect = 1.090e-64 Identity = 101/130 (77.69%), Postives = 111/130 (85.38%), Query Frame = 1
Query: 1 MRLFLTPILCLTLATPVWAKTPLSQVSEIDDGLMAIAIADEIRKNCDDISARMIRAYRQIQALEKRAKALGYSDDEIDTYVNSSAEKKRMRKKAETWLASKGVAASDEKALCKFGRDDIARGGPVGFFLR 390
MRL LT I+C+TLA P AK PL +VSEIDDGLMAIAIADEIRKNCDD+ RM+RAYRQI+ALEKRAKALGYS+ EID YV S EKKRMR KAETWLASKGV D +ALCKFGRDDI+RGGPVG+FLR
Sbjct: 1 MRLILTSIVCMTLALPAVAKPPLREVSEIDDGLMAIAIADEIRKNCDDLQPRMVRAYRQIKALEKRAKALGYSETEIDDYVKSDKEKKRMRGKAETWLASKGVNPKDTRALCKFGRDDISRGGPVGYFLR 130
BLAST of mRNA_C-australica_Contig_10395.1.1 vs. uniprot
Match: UPI001C450967 (DUF5333 family protein n=2 Tax=Rhodobacterales TaxID=204455 RepID=UPI001C450967) HSP 1 Score: 197 bits (502), Expect = 3.630e-63 Identity = 98/130 (75.38%), Postives = 113/130 (86.92%), Query Frame = 1
Query: 1 MRLFLTPILCLTLATPVWAKTPLSQVSEIDDGLMAIAIADEIRKNCDDISARMIRAYRQIQALEKRAKALGYSDDEIDTYVNSSAEKKRMRKKAETWLASKGVAASDEKALCKFGRDDIARGGPVGFFLR 390
MRL LT LCLT A P AK PLS+V EIDDGLMAIAIAD+IRK CD+I+ RM+RAYRQI+ALE RAKALGYS++EID YV+S AEKKRMRKKAE+WLA++GV A D+ ALC+FGRDDIARGGP+GFFLR
Sbjct: 1 MRLILTSALCLTFALPAAAKPPLSEVREIDDGLMAIAIADDIRKRCDEINPRMVRAYRQIKALESRAKALGYSEEEIDRYVSSDAEKKRMRKKAESWLATQGVNAKDKGALCQFGRDDIARGGPIGFFLR 130
BLAST of mRNA_C-australica_Contig_10395.1.1 vs. uniprot
Match: A0A238K1G4_9RHOB (Uncharacterized protein n=1 Tax=Maliponia aquimaris TaxID=1673631 RepID=A0A238K1G4_9RHOB) HSP 1 Score: 196 bits (497), Expect = 2.100e-62 Identity = 101/130 (77.69%), Postives = 111/130 (85.38%), Query Frame = 1
Query: 1 MRLFLTPILCLTLATPVWAKTPLSQVSEIDDGLMAIAIADEIRKNCDDISARMIRAYRQIQALEKRAKALGYSDDEIDTYVNSSAEKKRMRKKAETWLASKGVAASDEKALCKFGRDDIARGGPVGFFLR 390
MRL LT LCL LA P AK PL +VSEIDDGLMAIAIADEIRK CDDI+ARMIRA QI+ LEKRAKALGYSDDEID YVNSSAEKKRMR+KAE +LA++GV A D+KALC++GRD IA GGPVGFFLR
Sbjct: 1 MRLILTSFLCLCLALPASAKPPLREVSEIDDGLMAIAIADEIRKTCDDINARMIRALSQIKELEKRAKALGYSDDEIDDYVNSSAEKKRMRQKAEAYLAAQGVNAKDKKALCRYGRDQIASGGPVGFFLR 130
BLAST of mRNA_C-australica_Contig_10395.1.1 vs. uniprot
Match: A0A0W7WET1_9RHOB (Uncharacterized protein n=1 Tax=Ponticoccus marisrubri TaxID=1685382 RepID=A0A0W7WET1_9RHOB) HSP 1 Score: 154 bits (390), Expect = 4.110e-46 Identity = 83/130 (63.85%), Postives = 95/130 (73.08%), Query Frame = 1
Query: 1 MRLFLTPILCLTLATPVWAKTPLSQVSEIDDGLMAIAIADEIRKNCDDISARMIRAYRQIQALEKRAKALGYSDDEIDTYVNSSAEKKRMRKKAETWLASKGVAASDEKALCKFGRDDIARGGPVGFFLR 390
MRL L + LA P AK PLSQV IDD LMAIAIADEIRK CD I+ARMIRA +I +L AKALGY++DEID Y +S AEKKRMR KAE +LAS+GV A DE ALC+FGRD+IAR +G LR
Sbjct: 1 MRLIPALALLIALAAPAAAKPPLSQVRAIDDALMAIAIADEIRKTCDGINARMIRAMSRINSLRAEAKALGYTNDEIDAYTSSKAEKKRMRSKAEAYLASQGVDARDEAALCRFGRDEIARNTAIGSLLR 130
BLAST of mRNA_C-australica_Contig_10395.1.1 vs. uniprot
Match: A0A7W6DX09_9RHOB (Uncharacterized protein n=1 Tax=Sagittula marina TaxID=943940 RepID=A0A7W6DX09_9RHOB) HSP 1 Score: 152 bits (384), Expect = 3.360e-45 Identity = 79/130 (60.77%), Postives = 95/130 (73.08%), Query Frame = 1
Query: 1 MRLFLTPILCLTLATPVWAKTPLSQVSEIDDGLMAIAIADEIRKNCDDISARMIRAYRQIQALEKRAKALGYSDDEIDTYVNSSAEKKRMRKKAETWLASKGVAASDEKALCKFGRDDIARGGPVGFFLR 390
MRL LCL LA P +AK L +V EIDD LM IAIADEIRK CDDI+ARMIRA+ Q+ LE RAK+LGYS DEID YV+S +EK+RMR+KA WLA++GV A D+KALC FG+ I + +G LR
Sbjct: 1 MRLIPVLTLCLALAAPAFAKPHLREVPEIDDTLMQIAIADEIRKTCDDINARMIRAFAQVTQLESRAKSLGYSSDEIDDYVSSKSEKRRMREKASGWLAAQGVKADDDKALCAFGKAQIKKDTYIGSLLR 130
BLAST of mRNA_C-australica_Contig_10395.1.1 vs. uniprot
Match: X6L4C1_9RHOB (Uncharacterized protein n=1 Tax=Rhodobacteraceae bacterium PD-2 TaxID=1169855 RepID=X6L4C1_9RHOB) HSP 1 Score: 146 bits (369), Expect = 6.430e-43 Identity = 77/130 (59.23%), Postives = 92/130 (70.77%), Query Frame = 1
Query: 1 MRLFLTPILCLTLATPVWAKTPLSQVSEIDDGLMAIAIADEIRKNCDDISARMIRAYRQIQALEKRAKALGYSDDEIDTYVNSSAEKKRMRKKAETWLASKGVAASDEKALCKFGRDDIARGGPVGFFLR 390
MRL ++ A AK PL V +ID+GLMAIAIADEIRK CD I R+IRA Q+ L+ AK +GYS+DEID YV S AEK+RMRKKAE +L+S+GV A D ALC +G+ DIARGGPVG FLR
Sbjct: 1 MRLIPAALILAMTAVQAQAKPPLRDVPQIDNGLMAIAIADEIRKKCDGIEPRLIRAMSQLNTLKGMAKDMGYSNDEIDDYVTSKAEKERMRKKAEAYLSSQGVNAKDRAALCAYGKADIARGGPVGSFLR 130
BLAST of mRNA_C-australica_Contig_10395.1.1 vs. uniprot
Match: A0A8J7WB39_9RHOB (DUF5333 domain-containing protein n=1 Tax=Aestuariicoccus sp. KMU-90 TaxID=2827239 RepID=A0A8J7WB39_9RHOB) HSP 1 Score: 142 bits (359), Expect = 2.130e-41 Identity = 76/130 (58.46%), Postives = 92/130 (70.77%), Query Frame = 1
Query: 1 MRLFLTPILCLTLATPVWAKTPLSQVSEIDDGLMAIAIADEIRKNCDDISARMIRAYRQIQALEKRAKALGYSDDEIDTYVNSSAEKKRMRKKAETWLASKGVAASDEKALCKFGRDDIARGGPVGFFLR 390
MRL T +LC LA P AK PL V+EID+ LMAIAIADEIRK CD I+AR+I AY I AL+ RA++LGY++DEID YV S +EK RMR KA +LASKGV A D+ LC FG+ +IA +G LR
Sbjct: 1 MRLVPTVLLCAALALPAAAKPPLRDVAEIDNALMAIAIADEIRKTCDGINARLILAYTTINALKSRAESLGYTEDEIDAYVTSKSEKDRMRAKATAYLASKGVDAKDKGELCAFGKAEIASDSAIGRLLR 130
BLAST of mRNA_C-australica_Contig_10395.1.1 vs. uniprot
Match: A0A0P1GF53_9RHOB (Uncharacterized protein n=1 Tax=Tropicibacter naphthalenivorans TaxID=441103 RepID=A0A0P1GF53_9RHOB) HSP 1 Score: 142 bits (359), Expect = 2.130e-41 Identity = 74/130 (56.92%), Postives = 92/130 (70.77%), Query Frame = 1
Query: 1 MRLFLTPILCLTLATPVWAKTPLSQVSEIDDGLMAIAIADEIRKNCDDISARMIRAYRQIQALEKRAKALGYSDDEIDTYVNSSAEKKRMRKKAETWLASKGVAASDEKALCKFGRDDIARGGPVGFFLR 390
MRL T +LC+ LA P +AK PL V++ID+GLMAIAIADEIRK CD I AR+ A +I L +AKALGYS+ EID Y S +EK RMR KAE++LASKGV A + LC FGR +IA+G +G L+
Sbjct: 1 MRLIPTAVLCVALAAPAFAKVPLRDVADIDNGLMAIAIADEIRKECDGIDARLFTALGRINDLRNKAKALGYSNAEIDAYTKSKSEKDRMRAKAESYLASKGVDADNRDQLCAFGRAEIAKGTNIGSLLK 130
BLAST of mRNA_C-australica_Contig_10395.1.1 vs. uniprot
Match: UPI001C388D83 (DUF5333 family protein n=1 Tax=Thalassococcus sp. CAU 1522 TaxID=2851652 RepID=UPI001C388D83) HSP 1 Score: 142 bits (358), Expect = 3.420e-41 Identity = 73/127 (57.48%), Postives = 93/127 (73.23%), Query Frame = 1
Query: 7 LFLTPILCLTLATPVWAKTPLSQVSEIDDGLMAIAIADEIRKNCDDISARMIRAYRQIQALEKRAKALGYSDDEIDTYVNSSAEKKRMRKKAETWLASKGVAASDEKALCKFGRDDIARGGPVGFFL 387
L L +L LTLA P AK PL V++IDD LMA+AIADEIRK+C+DIS RMI+AY +++L+ A+ALGYSD+EI+ YV S AEK RMR KA+ WL ++GV D ALC FG+ +IARG +G L
Sbjct: 7 LVLPLVLGLTLAAPAAAKPPLRDVAKIDDHLMAVAIADEIRKSCEDISPRMIKAYSVLRSLKSDARALGYSDEEIEDYVTSKAEKARMRAKADAWLKARGVDPKDRAALCAFGKTEIARGSRIGELL 133 The following BLAST results are available for this feature:
BLAST of mRNA_C-australica_Contig_10395.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-australica_Contig_10395.1.1 >prot_C-australica_Contig_10395.1.1 ID=prot_C-australica_Contig_10395.1.1|Name=mRNA_C-australica_Contig_10395.1.1|organism=Chrysoparadoxa australica CS_1217|type=polypeptide|length=131bp MRLFLTPILCLTLATPVWAKTPLSQVSEIDDGLMAIAIADEIRKNCDDISback to top mRNA from alignment at C-australica_Contig_10395:370..762- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-australica_Contig_10395.1.1 ID=mRNA_C-australica_Contig_10395.1.1|Name=mRNA_C-australica_Contig_10395.1.1|organism=Chrysoparadoxa australica CS_1217|type=mRNA|length=393bp|location=Sequence derived from alignment at C-australica_Contig_10395:370..762- (Chrysoparadoxa australica CS_1217)back to top Coding sequence (CDS) from alignment at C-australica_Contig_10395:370..762- >mRNA_C-australica_Contig_10395.1.1 ID=mRNA_C-australica_Contig_10395.1.1|Name=mRNA_C-australica_Contig_10395.1.1|organism=Chrysoparadoxa australica CS_1217|type=CDS|length=393bp|location=Sequence derived from alignment at C-australica_Contig_10395:370..762- (Chrysoparadoxa australica CS_1217)back to top |