mRNA_C-australica_Contig_10393.1.1 (mRNA) Chrysoparadoxa australica CS_1217
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Overview
Homology
BLAST of mRNA_C-australica_Contig_10393.1.1 vs. uniprot
Match: A0A2E6H2W5_9PROT (Uncharacterized protein n=1 Tax=Halobacteriovorax sp. TaxID=2020862 RepID=A0A2E6H2W5_9PROT) HSP 1 Score: 135 bits (341), Expect = 3.310e-38 Identity = 65/136 (47.79%), Postives = 92/136 (67.65%), Query Frame = 1
Query: 28 VSCQAPRPTNLGVFEVEGKKILQKCPESPNCINSHFPEDKDHYLAPLKFQMEKEAARKLLLEVIKRDKSAKIITNDENYIHAEYTSSLLKFVDDVEFNLSDEGQIHFRSASRSGYSDLGVNKKRMSQISFYFYQNN 435
VSC AP P LGV + + L KCP+ PNC+ S F D++H+L P++ KE A + + ++ ++ SAKIIT +YIHAE+TS++ +F+DDVEF + ++HFRSASR G+SDLG NKKR+ I F F QN+
Sbjct: 14 VSCSAPMPKGLGVIDNQ----LSKCPDKPNCVTS-FKHDEEHFLEPIEIVSNKERAHQKITGILTKNSSAKIITTSPDYIHAEFTSAIFRFIDDVEFYFGIDKKVHFRSASRKGHSDLGANKKRIEDIRFKFQQND 144
BLAST of mRNA_C-australica_Contig_10393.1.1 vs. uniprot
Match: A0A2H0Q8X1_9PROT (Uncharacterized protein n=1 Tax=Bdellovibrionales bacterium CG11_big_fil_rev_8_21_14_0_20_38_13 TaxID=1973928 RepID=A0A2H0Q8X1_9PROT) HSP 1 Score: 134 bits (338), Expect = 1.660e-37 Identity = 67/142 (47.18%), Postives = 98/142 (69.01%), Query Frame = 1
Query: 10 LLVLVLVSCQAPRPTNLGVFEVEGKKILQKCPESPNCINSHFPEDKDHYLAPLKFQMEKEAARKLLLEVIKRDKSAKIITNDENYIHAEYTSSLLKFVDDVEFNLSDEGQIHFRSASRSGYSDLGVNKKRMSQISFYFYQNN 435
LL+L+L SCQ PTNLGV + + L+ CP+ PNC+ S+ ++ +++ P+K + E ++ +L ++ +DKSAKI+ ++ Y+ AEYTS+L KFVDDVEF + G +HFRSASR GYSDLG NK R+ I F F+QN+
Sbjct: 26 LLLLLLTSCQGTPPTNLGVHDNK----LRPCPDKPNCVVSYDFGEQKNFIEPIKSEEEPGRIKEKILGIVSKDKSAKIVEQNDTYLRAEYTSNLFKFVDDVEFWFGETGVVHFRSASRLGYSDLGANKDRIETIRFKFHQND 163
BLAST of mRNA_C-australica_Contig_10393.1.1 vs. uniprot
Match: A0A2N1RQF4_9SPIR (DUF1499 domain-containing protein n=1 Tax=Spirochaetae bacterium HGW-Spirochaetae-5 TaxID=2013837 RepID=A0A2N1RQF4_9SPIR) HSP 1 Score: 120 bits (302), Expect = 3.020e-32 Identity = 64/142 (45.07%), Postives = 90/142 (63.38%), Query Frame = 1
Query: 1 LLSLLVLVLVSCQAPRPTNLGVFEVEGKKILQKCPESPNCINSHFPEDKDHYLAPLKFQMEKEAARKLLLEVIKRDKSAKIITNDENYIHAEYTSSLLKFVDDVEFNLSDEGQ-IHFRSASRSGYSDLGVNKKRMSQISFYF 423
L+SL + +SC P ++GV + GK L CP+ PNC++S EDK H++ P + E A+ LLE +K KII++ +NYIHAEYTS + +FVDDVEF + D+ + +H RSASR GYSD+GVN KR+ + F
Sbjct: 8 LISLATVFAISCSGKTPGSIGVKD--GK--LAACPDKPNCVSS-MTEDKSHFIEPFTYSGSSEKAKSALLEAVKSQDRTKIISDSDNYIHAEYTSRIFRFVDDVEFLIDDKSKTVHVRSASRLGYSDMGVNGKRIESLRIIF 144
BLAST of mRNA_C-australica_Contig_10393.1.1 vs. uniprot
Match: A0A1G3QMV6_9SPIR (Uncharacterized protein n=1 Tax=Spirochaetes bacterium RBG_16_49_21 TaxID=1802195 RepID=A0A1G3QMV6_9SPIR) HSP 1 Score: 119 bits (298), Expect = 1.320e-31 Identity = 66/133 (49.62%), Postives = 84/133 (63.16%), Query Frame = 1
Query: 31 SCQAPRPTNLGVFEVEGKKILQKCPESPNCINSHFP-EDKDHYLAPLKFQMEKEAARKLLLEVIKRDKSAKIITNDENYIHAEYTSSLLKFVDDVEFNLSDEGQI-HFRSASRSGYSDLGVNKKRMSQISFYF 423
SC RP+NLGV + L CP SPNC++S DK HY+ P K+ A++ L+EVI+ K AKII N +NYI AEY S+L +FVDDVEF D +I H RSASR GY D+GVN+KR+ +I F
Sbjct: 22 SCSGTRPSNLGVKD----GALNLCPGSPNCVSSQAAASDKVHYIEPFKYAGSSSGAKERLVEVIESMKRAKIIINKDNYIDAEYASALFRFVDDVEFYFDDAKRIIHVRSASRVGYGDMGVNRKRVERIRTLF 150
BLAST of mRNA_C-australica_Contig_10393.1.1 vs. uniprot
Match: UPI0019FC6190 (DUF1499 domain-containing protein n=1 Tax=Proteobacteria bacterium TaxID=1977087 RepID=UPI0019FC6190) HSP 1 Score: 116 bits (290), Expect = 2.020e-30 Identity = 61/135 (45.19%), Postives = 87/135 (64.44%), Query Frame = 1
Query: 19 LVLVSCQAPRPTNLGVFEVEGKKILQKCPESPNCINSHFPEDKDHYLAPLKFQMEKEAARKLLLEVIKRDKSAKIITNDENYIHAEYTSSLLKFVDDVEFNLSDEGQIHFRSASRSGYSDLGVNKKRMSQISFYF 423
++++SC RP N+G+ G+ L CP PNC++S D+DH +APL++Q EK AA K L ++++ + + I+ ENY+H E S+++ FVDDVEF E IH RSASR GY DLGVN+KR+ QI F
Sbjct: 12 MMIISCAGQRPANIGIHN--GR--LTDCPSKPNCVSSQAA-DEDHAVAPLRYQGEKVAAFKRLKKIVESSERSTIVAESENYLHIECKSAIMGFVDDVEFYFPKEKVIHVRSASRLGYFDLGVNRKRVEQIRKLF 141
BLAST of mRNA_C-australica_Contig_10393.1.1 vs. uniprot
Match: A0A3A4SIY2_9DELT (DUF1499 domain-containing protein n=1 Tax=Desulfobacteraceae bacterium TaxID=2049433 RepID=A0A3A4SIY2_9DELT) HSP 1 Score: 115 bits (288), Expect = 2.640e-30 Identity = 58/114 (50.88%), Postives = 79/114 (69.30%), Query Frame = 1
Query: 91 LQKCPESPNCINSHFPEDKDHYLAPLKFQMEKEAARKLLLEVIKRDKSAKIITNDENYIHAEYTSSLLKFVDDVEFNLSD-EGQIHFRSASRSGYSDLGVNKKRMSQISFYFYQ 429
L CP+SPNC++S F D HY+ PL+++ K AR+ LL ++ K K++T++E YIHAE+TS + +FVDDVEF L + E IH RSASR GYSDLG N+KR+ +I F Q
Sbjct: 23 LLPCPDSPNCVSS-FETDSAHYVEPLRYEGSKADARQKLLSILNTTKRVKVVTSEETYIHAEFTSLIFRFVDDVEFYLDEKEPVIHVRSASRVGYSDLGANRKRVEEIRRQFIQ 135
BLAST of mRNA_C-australica_Contig_10393.1.1 vs. uniprot
Match: V6HJ00_9LEPT (PF07386 family protein n=3 Tax=Leptospira TaxID=171 RepID=V6HJ00_9LEPT) HSP 1 Score: 115 bits (288), Expect = 4.060e-30 Identity = 63/132 (47.73%), Postives = 88/132 (66.67%), Query Frame = 1
Query: 34 CQAPRPTNLGVFEVEGKKILQKCPESPNCINSHFPE-DKDHYLAPLKFQMEKEAARKLLLEVIKRDKSAKIITNDENYIHAEYTSSLLKFVDDVEFNLS-DEGQIHFRSASRSGYSDLGVNKKRMSQISFYF 423
C RPTN+GV + GK L CP SPNC++S P D+ H ++PL +Q + E A+K L+EVI+ +I+T +YI+AE+TS +++VDDVEF + D+ IH RSASR GYSD+GVN+KR+ I F
Sbjct: 21 CSGTRPTNIGVKD--GK--LLACPNSPNCVSSQIPPTDEKHSISPLVYQSKSEEAKKKLVEVIRSLPRTEIVTEKNDYIYAEFTSFTMRYVDDVEFFFAPDQKTIHVRSASRLGYSDMGVNRKRIETIRELF 148
BLAST of mRNA_C-australica_Contig_10393.1.1 vs. uniprot
Match: A0A848ZI13_9DELT (DUF1499 domain-containing protein n=1 Tax=Desulfobacteraceae bacterium TaxID=2049433 RepID=A0A848ZI13_9DELT) HSP 1 Score: 112 bits (281), Expect = 3.390e-29 Identity = 61/134 (45.52%), Postives = 88/134 (65.67%), Query Frame = 1
Query: 13 LVLVLVSCQAPRPTNLGVFEVEGKKILQKCPESPNCINSHFPEDKDHYLAPLKFQMEKEAARKLLLEVIKRDKSAKIITNDENYIHAEYTSSLLKFVDDVEFNLSDEGQ-IHFRSASRSGYSDLGVNKKRMSQI 411
L +L +C A + T G + L CP+SPNC++S EDK HY+ PL + + ++ AR+ L+ VI K ++I+T + NYIHA + S L +FVDDVEF+ D+ + I RSASR+GYSDLGVN+KR+ +I
Sbjct: 4 LTFILTACSANQTTKTGGTDDN----LSPCPKSPNCVSS-LSEDKSHYVEPLSYGVSQKEAREKLISVINSMKRSEIVTAEINYIHATFKSGLFRFVDDVEFSFDDQKKVIDVRSASRTGYSDLGVNRKRVEEI 132
BLAST of mRNA_C-australica_Contig_10393.1.1 vs. uniprot
Match: UPI001E36A2C7 (DUF1499 domain-containing protein n=3 Tax=Oleiphilus TaxID=141450 RepID=UPI001E36A2C7) HSP 1 Score: 114 bits (284), Expect = 3.450e-29 Identity = 60/132 (45.45%), Postives = 86/132 (65.15%), Query Frame = 1
Query: 19 LVLVSCQAPRPTNLGVFEVEGKKILQKCPESPNCINSHFPEDKDHYLAPLKFQMEKEAARKLLLEVIKRDKSAKIITNDENYIHAEYTSSLLKFVDDVEFNLSDEGQ-IHFRSASRSGYSDLGVNKKRMSQI 411
L+L +C RP LG E + LQ CP SPNC++S EDKDH++ + + K + + L++ I D+SA++I + YI+AEYTS+++++VDDVEF D Q IH RSASR G+SD GVN+ R+ QI
Sbjct: 42 LILSACTGTRPKQLG----EAQTSLQVCPSSPNCVSSLKDEDKDHFIESISYT-NKSSTHEALVKAINSDESAELIIKTDQYIYAEYTSAIMRYVDDVEFLFDDNQQRIHVRSASRLGHSDFGVNRDRIEQI 168
BLAST of mRNA_C-australica_Contig_10393.1.1 vs. uniprot
Match: A0A524PXM3_9BACT (DUF1499 domain-containing protein n=1 Tax=Chrysiogenales bacterium TaxID=2528039 RepID=A0A524PXM3_9BACT) HSP 1 Score: 112 bits (280), Expect = 6.030e-29 Identity = 61/138 (44.20%), Postives = 90/138 (65.22%), Query Frame = 1
Query: 13 LVLVLVSCQAPRPTNLGVFEVEGKKILQKCPESPNCINSHFPEDKDHYLAPLKFQMEKEAARKLLLEVIKRDKSAKIITNDENYIHAEYTSSLLKFVDDVEFNLSD-EGQIHFRSASRSGYSDLGVNKKRMSQISFYF 423
L+ V SC RP+N+G V+G+ L+ CPESPNC++S E H++ P+++ + AR+ LL +++ K A ++T +E Y+ AEY S+L +FVDDVEF D + IH RSASR GY D+GVN+KR+ +I F
Sbjct: 12 LMTVFFSCSGRRPSNIGA--VDGR--LRPCPESPNCVSSQA-EGVGHFIDPIRYSGDLAGAREKLLRIVRSMKRATVVTEEEGYLCAEYRSALFRFVDDVEFLFDDAKKMIHVRSASRVGYGDMGVNRKRIEKIRELF 144 The following BLAST results are available for this feature:
BLAST of mRNA_C-australica_Contig_10393.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-australica_Contig_10393.1.1 >prot_C-australica_Contig_10393.1.1 ID=prot_C-australica_Contig_10393.1.1|Name=mRNA_C-australica_Contig_10393.1.1|organism=Chrysoparadoxa australica CS_1217|type=polypeptide|length=147bp LLSLLVLVLVSCQAPRPTNLGVFEVEGKKILQKCPESPNCINSHFPEDKDback to top mRNA from alignment at C-australica_Contig_10393:3..443+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-australica_Contig_10393.1.1 ID=mRNA_C-australica_Contig_10393.1.1|Name=mRNA_C-australica_Contig_10393.1.1|organism=Chrysoparadoxa australica CS_1217|type=mRNA|length=441bp|location=Sequence derived from alignment at C-australica_Contig_10393:3..443+ (Chrysoparadoxa australica CS_1217)back to top Coding sequence (CDS) from alignment at C-australica_Contig_10393:3..443+ >mRNA_C-australica_Contig_10393.1.1 ID=mRNA_C-australica_Contig_10393.1.1|Name=mRNA_C-australica_Contig_10393.1.1|organism=Chrysoparadoxa australica CS_1217|type=CDS|length=441bp|location=Sequence derived from alignment at C-australica_Contig_10393:3..443+ (Chrysoparadoxa australica CS_1217)back to top |