mRNA_C-australica_Contig_10349.1.1 (mRNA) Chrysoparadoxa australica CS_1217

You are viewing an mRNA, more information available on the corresponding polypeptide page

Homology

BLAST of mRNA_C-australica_Contig_10349.1.1 vs. uniprot
Match: A0A222E052_9RHOB (Acetyltransferase (GNAT) domain protein n=2 Tax=Roseobacteraceae TaxID=2854170 RepID=A0A222E052_9RHOB)

HSP 1 Score: 322 bits (825), Expect = 3.250e-111
Identity = 158/167 (94.61%), Postives = 160/167 (95.81%), Query Frame = 1

Query:    1 LTAFTTPRLTVRPWEPVLDDTAARHLLEARLPTLLTPAVLEHLPPDFGPESGPCGIAHWIEARRKKAQVSLVERNSELIGLLFLFSPEGETTRHLGYLLCEDDWGQGYASELVQGLVAHLQNGPPQILHAGVSVDNPASACVLLKAGFSEDRPNTQDDIRRFTLAID 501
            +TAFTTP LTVRPWEPVLD TAARHLLEARLPTLLTPAVLEHLPPDFG ESGPCGIAHWIEARRKKAQVSLVERNSELIGLLFLFSPEGETTRHLGYLLCED WGQGYASELVQGLVAHLQNGPPQILHAGV+ DNPASA VLLKAGFSEDRPNTQDDIRRFT AID
Sbjct:    1 MTAFTTPHLTVRPWEPVLDVTAARHLLEARLPTLLTPAVLEHLPPDFGRESGPCGIAHWIEARRKKAQVSLVERNSELIGLLFLFSPEGETTRHLGYLLCEDGWGQGYASELVQGLVAHLQNGPPQILHAGVTFDNPASARVLLKAGFSEDRPNTQDDIRRFTFAID 167

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BLAST of mRNA_C-australica_Contig_10349.1.1 vs. uniprot
Match: A0A239E296_9RHOB (Protein N-acetyltransferase, RimJ/RimL family n=1 Tax=Antarctobacter heliothermus TaxID=74033 RepID=A0A239E296_9RHOB)

HSP 1 Score: 244 bits (622), Expect = 3.570e-80
Identity = 120/165 (72.73%), Postives = 133/165 (80.61%), Query Frame = 1

Query:    1 LTAFTTPRLTVRPWEPVLDDTAARHLLEARLPTLLTPAVLEHLPPDFGPESGPCGIAHWIEARRKKAQVSLVERNSELIGLLFLFSPEGETTRHLGYLLCEDDWGQGYASELVQGLVAHLQNGPPQILHAGVSVDNPASACVLLKAGFSEDRPNTQDDIRRFTLA 495
            +TAFTT RLT+ PWEPVLDD  ARHLLE RL TLLTPAVLEHLPP FGPE+GP G+ +WI  RR+KAQVSL+ R+S+LIGLLFLFSPEG+   HLGYLL  D WGQGYASELVQGL  HLQ+GPPQ LHAGV+ DNPASA VLLKAGF ED    +D IR F  A
Sbjct:    1 MTAFTTARLTIFPWEPVLDDAEARHLLETRLHTLLTPAVLEHLPPGFGPETGPQGMTNWISTRREKAQVSLINRDSDLIGLLFLFSPEGDNQCHLGYLLRADSWGQGYASELVQGLTTHLQHGPPQSLHAGVATDNPASARVLLKAGFKEDTSVAKDGIRSFRYA 165

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BLAST of mRNA_C-australica_Contig_10349.1.1 vs. uniprot
Match: UPI001C9626E4 (GNAT family N-acetyltransferase n=3 Tax=Rhodobacterales TaxID=204455 RepID=UPI001C9626E4)

HSP 1 Score: 198 bits (503), Expect = 3.400e-62
Identity = 94/166 (56.63%), Postives = 126/166 (75.90%), Query Frame = 1

Query:    1 LTAFTTPRLTVRPWEPVLDDTAARHLLEARLPTLLTPAVLEHLPPDFGPESGPCGIAHWIEARRKKAQVSLVERNSELIGLLFLFSPEGETTRHLGYLLCEDDWGQGYASELVQGLVAHLQNGPPQILHAGVSVDNPASACVLLKAGFSEDRPNTQDDIRRFTLAI 498
            +T FT+ RLTV PW   L D  AR  L+ RL T+LTPAVL+HLPPDF P++GP  ++ WI+ R ++AQVSL+E + +LIGLLFLF P+    RHLGYLL +  WG+GYA+EL+ GL+ HL+  PPQ++ AGV+++NPASA VLLKAGF+E +P+  +DIRRF L +
Sbjct:    1 MTGFTSRRLTVHPWNAALSDPVARSALQDRLATMLTPAVLKHLPPDFAPDAGPDAMSRWIDQRAERAQVSLIETDHQLIGLLFLFRPDPSGPRHLGYLLDQSAWGKGYATELLHGLIDHLRTQPPQVIEAGVAMENPASARVLLKAGFTEQKPD--NDIRRFRLEL 164

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BLAST of mRNA_C-australica_Contig_10349.1.1 vs. uniprot
Match: A0A238JPM5_9RHOB (N-acetyltransferase domain-containing protein n=1 Tax=Maliponia aquimaris TaxID=1673631 RepID=A0A238JPM5_9RHOB)

HSP 1 Score: 149 bits (376), Expect = 4.220e-43
Identity = 78/151 (51.66%), Postives = 98/151 (64.90%), Query Frame = 1

Query:   49 VLDDTAARHLLEARLPTLLTPAVLEHLPPDFGPESGPCGIAHWIEARRKKAQVSLVERNSELIGLLFLFSPE-GETTRHLGYLLCEDDWGQGYASELVQGLVAHLQNGPPQILHAGVSVDNPASACVLLKAGFSEDRPNTQDDIRRFTLAI 498
            +LDD A R  LE RL  +LTP VL HLP DF P  GP  +  WI  RR +AQV +VER+++LIGLLFLF P+   T  HLGYL  E+ WGQGYA+EL+ GL+A L+   P  L A V+  NPASA VL K+GF  D+      + RF L++
Sbjct:    1 MLDDPALRPSLETRLARMLTPLVLAHLPSDFPPGHGPNAMGDWIATRRARAQVFVVERDADLIGLLFLFRPDPASTDLHLGYLFAEEAWGQGYATELLSGLLAQLRPQAPLTLRASVTTGNPASARVLRKSGFRSDKDQPDKGLLRFHLSL 151

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BLAST of mRNA_C-australica_Contig_10349.1.1 vs. uniprot
Match: UPI001C605389 (GNAT family N-acetyltransferase n=1 Tax=Mameliella sp. CS4 TaxID=2862329 RepID=UPI001C605389)

HSP 1 Score: 143 bits (360), Expect = 1.930e-40
Identity = 84/164 (51.22%), Postives = 95/164 (57.93%), Query Frame = 1

Query:    1 LTAFTTPRLTVRPWEPVLDDTAARHLLEARLPTLLTPAVLEHLPPDFGPESGPCGIAHWIEARRKKAQVSLVERNSELIGLLFLFS-PEGETT-RHLGYLLCEDDWGQGYASELVQGLVAHLQNGPPQILHAGVSVDNPASACVLLKAGFSEDRPNTQDDIRRF 486
            +T FTT RL V PW   LDD A R  LE RL  +LTP VL  LPP    +  P  I +WI AR   + V LVE    L+GLL LFS PE  +   HLGYL  E+ WG+GYA+ELVQGL AHL    P  L AGV   NPASA VL K+GF  D      D  RF
Sbjct:    1 MTGFTTSRLRVTPWAAALDDPATRPALEHRLARILTPPVLRPLPPSVQLDGTPSQITNWIAARHTASNVWLVETGETLVGLLMLFSDPERVSDCAHLGYLFAEEAWGKGYATELVQGLAAHLDETAPMTLLAGVDRTNPASARVLEKSGFLPDPETPTADTLRF 164

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BLAST of mRNA_C-australica_Contig_10349.1.1 vs. uniprot
Match: A0A6F8QFD4_9RHOB (N-acetyltransferase domain-containing protein n=7 Tax=Roseobacteraceae TaxID=2854170 RepID=A0A6F8QFD4_9RHOB)

HSP 1 Score: 140 bits (354), Expect = 1.560e-39
Identity = 86/164 (52.44%), Postives = 98/164 (59.76%), Query Frame = 1

Query:    1 LTAFTTPRLTVRPWEPVLDDTAARHLLEARLPTLLTPAVLEHLPPDFGPESGPCGIAHWIEARRKKAQVSLVERNSELIGLLFLFS-PEG-ETTRHLGYLLCEDDWGQGYASELVQGLVAHLQNGPPQILHAGVSVDNPASACVLLKAGFSEDRPNTQDDIRRF 486
            +T F T RL V PWE  L+D A+R  LE RL  +LT  VL  LPP    +     IA+WI ARR  + V LVE +  LIGLL LFS PEG E   HLGYL  E+ WG+GYA+ELVQGL AHL       L AGV   NPASA VL K+GF  D   T  D  RF
Sbjct:    1 MTGFATERLRVTPWEAALNDPASRPALEERLAQILTRPVLRPLPPSVQLDETEKRIANWIAARRVVSDVWLVETDGILIGLLMLFSDPEGDEDCAHLGYLFAEEAWGKGYATELVQGLAAHLDGTARITLLAGVDRANPASARVLEKSGFRPDPETTSADTLRF 164

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BLAST of mRNA_C-australica_Contig_10349.1.1 vs. uniprot
Match: A0A238KLL6_9RHOB (N-acetyltransferase domain-containing protein n=1 Tax=Pelagimonas varians TaxID=696760 RepID=A0A238KLL6_9RHOB)

HSP 1 Score: 132 bits (331), Expect = 9.040e-36
Identity = 75/167 (44.91%), Postives = 92/167 (55.09%), Query Frame = 1

Query:    7 AFTTPRLTVRPWEPVLDDTAARHLLEARLPTLLTPAVLEHLPPDFGPESGPCGIAHWIEARRKKAQVSLVERNSELIGLLFLFSP---EGETTRHLGYLLCEDDWGQGYASELVQGLVAHLQNGPPQILHAGVSVDNPASACVLLKAGFSEDRPNTQDDIRRFTLAI 498
            AF+T RL V PW   L D  A   L+  L  +LT  VL+HLP        P  I  WI  R + A + LV  ++ L+GL+FLF P         HLGYLL E+ WG+GYA+ELV GLVA L  GP   L  GV+  NPASA VLLKAGF      + D+I  F   +
Sbjct:   18 AFSTDRLQVVPWAKTLADPDAFRGLQTALTAMLTKPVLQHLPEQLQLSDAPDAIETWIADRDQSAAIHLVSASNVLVGLMFLFRPVQTAATDPMHLGYLLGEEAWGKGYATELVSGLVAALSTGPLMTLQGGVAAGNPASAKVLLKAGFERSPQKSTDEIEIFQRVV 184

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BLAST of mRNA_C-australica_Contig_10349.1.1 vs. uniprot
Match: UPI0014561A25 (GNAT family N-acetyltransferase n=1 Tax=Primorskyibacter sp. XY-301 TaxID=2562685 RepID=UPI0014561A25)

HSP 1 Score: 131 bits (330), Expect = 9.100e-36
Identity = 79/152 (51.97%), Postives = 95/152 (62.50%), Query Frame = 1

Query:   10 FTTPRLTVRPWEPVLDDTAARHLLEARLPTLLTPAVLEHLPPDFGPESGPCGIAHWIEARRKKAQVSLVERNSE--LIGLLFLF----SPEGETTRHLGYLLCEDDWGQGYASELVQGLVAHLQNGPPQILHAGVSVDNPASACVLLKAGFS 447
            F+TPRL VR W   L   +AR  LEA L ++LTP VL HLPP     SGP GI  WI+AR+ ++ V ++E  +E  L GLL L     +PE  T  H+GYLL +  WGQGYASELV GLV   Q   P  L  GV + NPASA VLLKAGF+
Sbjct:    9 FSTPRLIVRHWRSDLAAPSARAALEAALSSVLTPPVLAHLPPSMQLSSGPQGIGCWIDARQAESTVFVIETRAEVTLAGLLILAPDQCNPEAPTV-HIGYLLAQSAWGQGYASELVAGLVEACQAHAPLKLVGGVDLGNPASARVLLKAGFA 159

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BLAST of mRNA_C-australica_Contig_10349.1.1 vs. uniprot
Match: A0A0W7WQF2_9RHOB (N-acetyltransferase domain-containing protein n=1 Tax=Ponticoccus marisrubri TaxID=1685382 RepID=A0A0W7WQF2_9RHOB)

HSP 1 Score: 129 bits (324), Expect = 5.990e-35
Identity = 76/154 (49.35%), Postives = 95/154 (61.69%), Query Frame = 1

Query:   10 FTTPRLTVRPWEPVLDDTAARHLLEARLPTLLTPAVLEHLPPDFGPESGPCGIAHWIEARRKKAQVSLVERNS--ELIGLLFLFSPEGETTR----HLGYLLCEDDWGQGYASELVQGLVAHLQNGPPQILHAGVSVDNPASACVLLKAGFSED 453
            F T RL V PW P L D A R  LE  L  LL+PAV  HLPP   P +G   +A WI ARR +++V LVE  +  +L+GLL L    GE ++    HLGYLL E  WGQGYA+E+++G+V  +    P +L AGV   NPASA VL+KAGF  D
Sbjct:    6 FETARLCVTPWGPRLSDGAGRAALEVALARLLSPAVTAHLPPALHPGTGAAAMAEWIAARRAESEVFLVEDKATGQLLGLLILAG--GEESKPPVLHLGYLLAEVAWGQGYATEVLRGVVEAVSARGPALLLAGVDPANPASARVLVKAGFQRD 157

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BLAST of mRNA_C-australica_Contig_10349.1.1 vs. uniprot
Match: A0A6B2P4C0_9RHOB (GNAT family N-acetyltransferase n=1 Tax=Aliiroseovarius sp. PrR006 TaxID=2706883 RepID=A0A6B2P4C0_9RHOB)

HSP 1 Score: 127 bits (319), Expect = 3.500e-34
Identity = 75/150 (50.00%), Postives = 91/150 (60.67%), Query Frame = 1

Query:   10 FTTPRLTVRPWEPVLDDTAARHLLEARLPTLLTPAVLEHLPPDFGPESGPCGIAHWIEARRKKAQVSLVE--RNSELIGLLFLF---SPEGETTRHLGYLLCEDDWGQGYASELVQGLVAHLQNGPPQILHAGVSVDNPASACVLLKAGF 444
            FTT RL+V  W  VL D A R  LEA L  LLTP VLEHLPP    E G   I+ WI+AR  +++V LVE  R S+L+GLL L    S   +T  H+GYL  +  WGQGYASE++ GL + ++   P  L  GV   N ASA VL KAGF
Sbjct:    6 FTTQRLSVFSWHDVLADPAMRASLEAELSGLLTPKVLEHLPPPLQLEGGKASISDWIDARSAESEVHLVEDLRTSDLLGLLILAEGASDPDQTVLHIGYLFAQHAWGQGYASEMLVGLCSVVEQDRPARLAGGVDRQNQASARVLQKAGF 155

The following BLAST results are available for this feature:

BLAST of mRNA_C-australica_Contig_10349.1.1 vs. uniprot

BLAST of mRNA_C-australica_Contig_10349.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25

ZOOM

x 1

POSITION

0


Match Name	E-value	Identity	Description
A0A222E052_9RHOB	3.250e-111	94.61	Acetyltransferase (GNAT) domain protein n=2 Tax=Ro...	[more]
A0A239E296_9RHOB	3.570e-80	72.73	Protein N-acetyltransferase, RimJ/RimL family n=1 ...	[more]
UPI001C9626E4	3.400e-62	56.63	GNAT family N-acetyltransferase n=3 Tax=Rhodobacte...	[more]
A0A238JPM5_9RHOB	4.220e-43	51.66	N-acetyltransferase domain-containing protein n=1 ...	[more]
UPI001C605389	1.930e-40	51.22	GNAT family N-acetyltransferase n=1 Tax=Mameliella...	[more]
A0A6F8QFD4_9RHOB	1.560e-39	52.44	N-acetyltransferase domain-containing protein n=7 ...	[more]
A0A238KLL6_9RHOB	9.040e-36	44.91	N-acetyltransferase domain-containing protein n=1 ...	[more]
UPI0014561A25	9.100e-36	51.97	GNAT family N-acetyltransferase n=1 Tax=Primorskyi...	[more]
A0A0W7WQF2_9RHOB	5.990e-35	49.35	N-acetyltransferase domain-containing protein n=1 ...	[more]
A0A6B2P4C0_9RHOB	3.500e-34	50.00	GNAT family N-acetyltransferase n=1 Tax=Aliiroseov...	[more]

Pages

Sequences

The following sequences are available for this feature:

protein sequence
mRNA from alignment at C-australica_Contig_10349:321..824-
coding sequence from alignment at C-australica_Contig_10349:321..824-

protein sequence of mRNA_C-australica_Contig_10349.1.1

>prot_C-australica_Contig_10349.1.1 ID=prot_C-australica_Contig_10349.1.1|Name=mRNA_C-australica_Contig_10349.1.1|organism=Chrysoparadoxa australica CS_1217|type=polypeptide|length=168bp
LTAFTTPRLTVRPWEPVLDDTAARHLLEARLPTLLTPAVLEHLPPDFGPE
SGPCGIAHWIEARRKKAQVSLVERNSELIGLLFLFSPEGETTRHLGYLLC
EDDWGQGYASELVQGLVAHLQNGPPQILHAGVSVDNPASACVLLKAGFSE
DRPNTQDDIRRFTLAID*

mRNA from alignment at C-australica_Contig_10349:321..824-

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_C-australica_Contig_10349.1.1 ID=mRNA_C-australica_Contig_10349.1.1|Name=mRNA_C-australica_Contig_10349.1.1|organism=Chrysoparadoxa australica CS_1217|type=mRNA|length=504bp|location=Sequence derived from alignment at C-australica_Contig_10349:321..824- (Chrysoparadoxa australica CS_1217)
TTGACCGCGTTCACCACCCCACGCCTGACGGTTCGCCCATGGGAGCCCGT
ATTGGACGACACAGCGGCGCGCCACCTGTTGGAGGCACGTTTGCCCACCC
TGCTGACTCCTGCAGTGCTAGAGCACCTGCCGCCCGATTTCGGCCCGGAA
AGTGGCCCATGCGGCATTGCCCACTGGATCGAAGCCCGCCGCAAAAAGGC
GCAGGTCAGCCTTGTCGAACGAAACTCGGAGCTGATCGGCCTGCTGTTCC
TGTTTTCGCCCGAAGGCGAGACGACGCGCCACCTCGGCTACTTGCTGTGC
GAGGACGATTGGGGGCAAGGCTATGCCTCTGAATTGGTGCAGGGCCTTGT
GGCACACTTGCAGAACGGTCCGCCCCAGATCCTGCACGCTGGTGTTTCTG
TCGACAATCCGGCCTCCGCCTGCGTCTTGCTCAAGGCCGGGTTCAGCGAA
GACCGGCCCAACACGCAGGACGACATACGCAGGTTCACCCTTGCCATCGA
TTAA

Coding sequence (CDS) from alignment at C-australica_Contig_10349:321..824-

>mRNA_C-australica_Contig_10349.1.1 ID=mRNA_C-australica_Contig_10349.1.1|Name=mRNA_C-australica_Contig_10349.1.1|organism=Chrysoparadoxa australica CS_1217|type=CDS|length=504bp|location=Sequence derived from alignment at C-australica_Contig_10349:321..824- (Chrysoparadoxa australica CS_1217)
TTGACCGCGTTCACCACCCCACGCCTGACGGTTCGCCCATGGGAGCCCGT
ATTGGACGACACAGCGGCGCGCCACCTGTTGGAGGCACGTTTGCCCACCC
TGCTGACTCCTGCAGTGCTAGAGCACCTGCCGCCCGATTTCGGCCCGGAA
AGTGGCCCATGCGGCATTGCCCACTGGATCGAAGCCCGCCGCAAAAAGGC
GCAGGTCAGCCTTGTCGAACGAAACTCGGAGCTGATCGGCCTGCTGTTCC
TGTTTTCGCCCGAAGGCGAGACGACGCGCCACCTCGGCTACTTGCTGTGC
GAGGACGATTGGGGGCAAGGCTATGCCTCTGAATTGGTGCAGGGCCTTGT
GGCACACTTGCAGAACGGTCCGCCCCAGATCCTGCACGCTGGTGTTTCTG
TCGACAATCCGGCCTCCGCCTGCGTCTTGCTCAAGGCCGGGTTCAGCGAA
GACCGGCCCAACACGCAGGACGACATACGCAGGTTCACCCTTGCCATCGA
TTAA