mRNA_C-australica_Contig_10341.1.1 (mRNA) Chrysoparadoxa australica CS_1217
You are viewing an mRNA, more information available on the corresponding polypeptide page
Overview
Homology
BLAST of mRNA_C-australica_Contig_10341.1.1 vs. uniprot
Match: UPI0003739EDF (OmpA family protein n=1 Tax=Balneola vulgaris TaxID=287535 RepID=UPI0003739EDF) HSP 1 Score: 286 bits (733), Expect = 7.500e-93 Identity = 140/142 (98.59%), Postives = 141/142 (99.30%), Query Frame = 1 Query: 49 MKHGWILLLSLLLIPLTPLNAQTQDEKVWMSLNVGHHQYDGDYANEMMQFDVAKDLSGGFGLHFFLNNSFDLNYTFDFGSLDNDYPPETFRKYFFANNLNLQFNFANDIIFRKDAPLQPFIGAGAGATYFTGGSEDVADNVS 474 MKHGWILLLSLLLIPLTPLNAQTQDEKVWMSLNVGHHQYDGDYANEMMQFDVAKDLSGGFGLHFFLNNSFD+NYTFDFGSLDNDYPPETFRKYFFANNLNLQFNFANDIIFRKDAPLQPFIGAGAGATYFTGGSEDV DNVS Sbjct: 1 MKHGWILLLSLLLIPLTPLNAQTQDEKVWMSLNVGHHQYDGDYANEMMQFDVAKDLSGGFGLHFFLNNSFDINYTFDFGSLDNDYPPETFRKYFFANNLNLQFNFANDIIFRKDAPLQPFIGAGAGATYFTGGSEDVDDNVS 142
BLAST of mRNA_C-australica_Contig_10341.1.1 vs. uniprot
Match: A0A3F3I5G1_9BACT (OmpA-like domain-containing protein n=4 Tax=Bacteroidetes/Chlorobi group TaxID=68336 RepID=A0A3F3I5G1_9BACT) HSP 1 Score: 144 bits (362), Expect = 8.280e-38 Identity = 66/123 (53.66%), Postives = 83/123 (67.48%), Query Frame = 1 Query: 106 NAQTQDEKVWMSLNVGHHQYDGDYANEMMQFDVAKDLSGGFGLHFFLNNSFDLNYTFDFGSLDNDYPPETFRKYFFANNLNLQFNFANDIIFRKDAPLQPFIGAGAGATYFTGGSEDVADNVS 474 NAQT + K W+S NVG+HQYDGD NEM FD+ KD+SGG G+H +LN SF+ NY ++G LD DY F KYF NN FN AN I+ ++D+ +QPF+G GA TYF G E + DNVS Sbjct: 20 NAQTSENKTWLSFNVGNHQYDGDLGNEMTAFDILKDVSGGIGVHQYLNKSFNFNYALNYGLLDTDYGSNRFSKYFLNNNFTAHFNLANGIVLKEDSWIQPFVGTGASLTYFFGEQESIDDNVS 142
BLAST of mRNA_C-australica_Contig_10341.1.1 vs. uniprot
Match: A0A1B6Y7X2_9BACT (OmpA-like domain-containing protein n=2 Tax=Balneola sp. EhC07 TaxID=1849360 RepID=A0A1B6Y7X2_9BACT) HSP 1 Score: 138 bits (347), Expect = 1.060e-35 Identity = 65/121 (53.72%), Postives = 87/121 (71.90%), Query Frame = 1 Query: 109 AQTQDEKVWMSLNVGHHQYDGDYANEMMQFDVAKDLSGGFGLHFFLNNSFDLNYTFDFGSLDNDYPPETFRKYFFANNLNLQFNFANDIIFRKDAPLQPFIGAGAGATYFTGGSEDVADNV 471 Q D K W+SLN+G HQYDGD+ NE+ + +V D+S G G+H +LNN+FDLNY F++GSLD D FRK F +NNL + FN ANDIIF+KDA ++PFIGAG G +YF G + ++D + Sbjct: 11 GQNSDSKTWISLNIGTHQYDGDFTNEIFKPEVYTDVSVGLGVHRYLNNTFDLNYEFNYGSLDTDNMDPGFRKLFLSNNLMIDFNLANDIIFKKDAFVRPFIGAGYGVSYFFGKNNSISDEL 131
BLAST of mRNA_C-australica_Contig_10341.1.1 vs. uniprot
Match: A0A3D1G9M7_9BACT (OmpA-like domain-containing protein n=1 Tax=Balneolaceae bacterium TaxID=2053516 RepID=A0A3D1G9M7_9BACT) HSP 1 Score: 124 bits (311), Expect = 1.830e-30 Identity = 56/122 (45.90%), Postives = 85/122 (69.67%), Query Frame = 1 Query: 109 AQTQDEKVWMSLNVGHHQYDGDYANEMMQFDVAKDLSGGFGLHFFLNNSFDLNYTFDFGSLDNDYPPETFRKYFFANNLNLQFNFANDIIFRKDAPLQPFIGAGAGATYFTGGSEDVADNVS 474 AQT+D W+S++VGHH+Y+GDY+NEM FD+ KD++ G GLH ++N++FD YT + GSLD DY F+K+F+ NN ++ AN + +++ ++PF+ GAG T FTG E + +NVS Sbjct: 30 AQTKDNPTWLSVSVGHHEYNGDYSNEMFHFDIPKDMTAGIGLHHYINSNFDFLYTLNLGSLDTDYGTR-FKKFFWNNNFQFKYKLANGSLLSEESKVKPFLTLGAGLTAFTGKDEAIDNNVS 150
BLAST of mRNA_C-australica_Contig_10341.1.1 vs. uniprot
Match: A0A1M5AI07_9BACT (Outer membrane protein OmpA n=1 Tax=Aliifodinibius roseus TaxID=1194090 RepID=A0A1M5AI07_9BACT) HSP 1 Score: 103 bits (256), Expect = 8.370e-23 Identity = 54/130 (41.54%), Postives = 82/130 (63.08%), Query Frame = 1 Query: 103 LNAQTQDEKVWMSLNVGHHQYDGDYANEMMQFDVAKDLSGGFGLHFFLNNSFDLNYTFDFGSLD--NDYPPE------TFRKYFFANNLNLQFNFANDIIFRKDAPLQPFIGAGAGATYFTGGSEDVADN 468 L+AQT+D WMS+++GH++YDGD NEM++++V D S G GLH +L+ SFD + ++G LD N P +F + NL L++ AN IF ++A LQPF+ AG G T + GGS+++ +N Sbjct: 19 LHAQTEDHPTWMSIHLGHNEYDGDLGNEMLEYEVDTDWSAGIGLHQYLSPSFDFDAILEYGYLDYKNQEDPNDVKAHNSFGTKYVNANLMLRYKLANGYIFSQNATLQPFLAAGVGVTPYFGGSDNIYEN 148
BLAST of mRNA_C-australica_Contig_10341.1.1 vs. uniprot
Match: A0A521AP86_9BACT (Outer membrane protein OmpA n=1 Tax=Aliifodinibius sediminis TaxID=1214077 RepID=A0A521AP86_9BACT) HSP 1 Score: 102 bits (253), Expect = 2.240e-22 Identity = 54/132 (40.91%), Postives = 81/132 (61.36%), Query Frame = 1 Query: 103 LNAQTQDEKVWMSLNVGHHQYDGDYANEMMQFDVAKDLSGGFGLHFFLNNSFDLNYTFDFGSLD----NDYPP----ETFRKYFFANNLNLQFNFANDIIFRKDAPLQPFIGAGAGATYFTGGSEDVADNVS 474 L AQT+D WMS+++GH++YDGD NEM++++V D S G G H +L+ SFD + ++G LD +D P +F + NL L++ AN IF +DA LQPF+ AG G T + GGS+++ + S Sbjct: 19 LQAQTEDRPTWMSIHIGHNEYDGDLGNEMLEYEVDTDWSAGIGFHQYLSPSFDFDAILEYGYLDYKNQDDSNPVKADNSFGTKYINANLMLRYKLANGYIFSEDATLQPFLAAGLGVTPYFGGSDNIYEGQS 150
BLAST of mRNA_C-australica_Contig_10341.1.1 vs. uniprot
Match: A0A2D4ZRJ8_9BACT (Cell envelope biogenesis protein OmpA n=3 Tax=Bacteroidetes/Chlorobi group TaxID=68336 RepID=A0A2D4ZRJ8_9BACT) HSP 1 Score: 92.0 bits (227), Expect = 7.980e-19 Identity = 49/137 (35.77%), Postives = 86/137 (62.77%), Query Frame = 1 Query: 40 GQIMKHGWILLLSLLLIPLTPLNAQTQDEKVWMSLNVGHHQYDGDYANEMMQFDVAKDLSGGFGLHFFLNNSFDLNYTFDFGSLDNDYPPETFRKYFFANNLNLQFNFANDIIFRKDAPLQPFIGAGAGATYFTGGS 450 +I+ +I+L L++ P+T NAQT ++K W+S+ +GHH+ D D +EM +F+V +D+ GG + +LN+SFD N+ G +D++Y +F +Y NL ++ FAN I K++ ++P++ AG G + + GS Sbjct: 3 NKIITGFFIMLCGLMISPIT--NAQTIEDKTWLSVYLGHHEVDVDGYSEMGKFNVPRDVGGGISIQRYLNDSFDANFGIYLGRVDHEYN-NSFSRYMVNTNLTARYKFANGYIIEKESTVRPYLLAGLGFSRYAEGS 136
BLAST of mRNA_C-australica_Contig_10341.1.1 vs. uniprot
Match: UPI000399FF7F (OmpA family protein n=1 Tax=Balneola vulgaris TaxID=287535 RepID=UPI000399FF7F) HSP 1 Score: 84.7 bits (208), Expect = 3.010e-16 Identity = 43/114 (37.72%), Postives = 68/114 (59.65%), Query Frame = 1 Query: 109 AQTQDEKVWMSLNVGHHQYDGDYANEMMQFDVAKDLSGGFGLHFFLNNSFDLNYTFDFGSLDNDYPPETFRKYFFANNLNLQFNFANDIIFRKDAPLQPFIGAGAGATYFTGGS 450 AQT ++K W+S+ + H++ D D EM +F++ KD+ GG + +L+ SFDLN G +DN++ + F KY N+ ++ FAN I +DA +QPF+ G G +F GS Sbjct: 7 AQTIEDKTWISIFLSHNEIDADGYTEMGKFNIPKDMGGGIAIDRYLSPSFDLNAGLYLGRVDNEFTAQ-FSKYMINTNITAEYKFANGYIVEEDAAIQPFLLGGLGYAWFEKGS 119
BLAST of mRNA_C-australica_Contig_10341.1.1 vs. uniprot
Match: A0A3D2ICL6_9BACT (Uncharacterized protein (Fragment) n=1 Tax=Balneola sp. TaxID=2024824 RepID=A0A3D2ICL6_9BACT) HSP 1 Score: 71.2 bits (173), Expect = 4.250e-13 Identity = 38/106 (35.85%), Postives = 67/106 (63.21%), Query Frame = 1 Query: 28 SKLIGQIMKHGWILLLSLLLIPLTPLNAQTQDEKVWMSLNVGHHQYDGDYANEMMQFDVAKDLSGGFGLHFFLNNSFDLNYTFDFGSLDNDYPPETFRKYFFANNL 345 + + +I+ +I+L L++ P+T NAQT ++K W+S+ +GHH+ D D +EM +F+V +D+ GG + +LN+SFD N+ G +D++Y +F +Y NL Sbjct: 11 TDMFNKIITGFFIMLCGLMISPIT--NAQTIEDKTWLSVYLGHHEVDVDGYSEMGKFNVPRDVGGGISIQRYLNDSFDANFGIYLGRVDHEYN-NSFSRYMVNTNL 113
BLAST of mRNA_C-australica_Contig_10341.1.1 vs. uniprot
Match: A0A6M1SU11_9BACT (OmpA family protein n=1 Tax=Balneolaceae bacterium YR4-1 TaxID=2709311 RepID=A0A6M1SU11_9BACT) HSP 1 Score: 55.5 bits (132), Expect = 5.070e-6 Identity = 23/62 (37.10%), Postives = 39/62 (62.90%), Query Frame = 1 Query: 109 AQTQDEKVWMSLNVGHHQYDGDYANEMMQFDVAKDLSGGFGLHFFLNNSFDLNYTFDFGSLD 294 AQ+++ W++ +VGH +Y+GD+ NE++ F+V D + G L +L N FD + D+ LD Sbjct: 32 AQSRNRPTWITFSVGHQEYNGDFGNEILAFEVGYDWTLGLELDQYLGNLFDFELSMDYAELD 93 The following BLAST results are available for this feature:
BLAST of mRNA_C-australica_Contig_10341.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 10 ZOOMx 1POSITION0
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-australica_Contig_10341.1.1 >prot_C-australica_Contig_10341.1.1 ID=prot_C-australica_Contig_10341.1.1|Name=mRNA_C-australica_Contig_10341.1.1|organism=Chrysoparadoxa australica CS_1217|type=polypeptide|length=158bp MHILDSIDNSKLIGQIMKHGWILLLSLLLIPLTPLNAQTQDEKVWMSLNVback to top mRNA from alignment at C-australica_Contig_10341:2..475- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-australica_Contig_10341.1.1 ID=mRNA_C-australica_Contig_10341.1.1|Name=mRNA_C-australica_Contig_10341.1.1|organism=Chrysoparadoxa australica CS_1217|type=mRNA|length=474bp|location=Sequence derived from alignment at C-australica_Contig_10341:2..475- (Chrysoparadoxa australica CS_1217)back to top Coding sequence (CDS) from alignment at C-australica_Contig_10341:2..475- >mRNA_C-australica_Contig_10341.1.1 ID=mRNA_C-australica_Contig_10341.1.1|Name=mRNA_C-australica_Contig_10341.1.1|organism=Chrysoparadoxa australica CS_1217|type=CDS|length=474bp|location=Sequence derived from alignment at C-australica_Contig_10341:2..475- (Chrysoparadoxa australica CS_1217)back to top |