mRNA_C-australica_Contig_10333.1.1 (mRNA) Chrysoparadoxa australica CS_1217
You are viewing an mRNA, more information available on the corresponding polypeptide page
Overview
Homology
BLAST of mRNA_C-australica_Contig_10333.1.1 vs. uniprot
Match: A0A1F3H6Q1_9BACT (Heparinase n=3 Tax=Bacteroidetes TaxID=976 RepID=A0A1F3H6Q1_9BACT) HSP 1 Score: 195 bits (495), Expect = 7.810e-56 Identity = 103/184 (55.98%), Postives = 133/184 (72.28%), Query Frame = 1 Query: 1 INLSKIIMFVFLIIAIASCNKDEFE----DIDLSKAGHPRILLLANEEDQIKELIDRDEAMRKIHAAIMRESNRILGRDPLKRVMVGRRLLGTSRELLKRSFFLSYAYRMTGEDRFLQRAEKELVAVAQFSDWNPSHFLDVAEMTTGMAIGYDWLFEHLSSSARSQIRDAIKSKGIEPSFDSKY 540 IN ++ L+ ++C+K+E E D++ +K GHPRI+LL EE QIKELI D +K+H AI+ E N I+ + L+RVM GRRLLGTSRELL+R FFLSY YRMT R+L++AEKE++AV++F+DWNPSHFLDVAEMT G+AIGYDWLF L S R I+ AI KG+ PS +SKY Sbjct: 3 INSIILLCLFILLFGGSTCDKNEPETGQTDVENNKTGHPRIMLLEGEEAQIKELIAGDATWKKMHDAIIGECNVIITKPELERVMTGRRLLGTSRELLRRVFFLSYGYRMTANKRYLEKAEKEMLAVSRFTDWNPSHFLDVAEMTMGVAIGYDWLFNGLPDSTRETIKQAIVQKGLNPSKESKY 186
BLAST of mRNA_C-australica_Contig_10333.1.1 vs. uniprot
Match: A0A355IXN2_9BACT (Heparinase n=2 Tax=Bacteroidetes TaxID=976 RepID=A0A355IXN2_9BACT) HSP 1 Score: 192 bits (488), Expect = 7.740e-55 Identity = 97/173 (56.07%), Postives = 129/173 (74.57%), Query Frame = 1 Query: 16 IIMFVFLIIAIASCNKDEFEDIDLSKAGHPRILLLANEEDQIKELIDRDEAMRKIHAAIMRESNRILGRDPLKRVMVGRRLLGTSRELLKRSFFLSYAYRMTGEDRFLQRAEKELVAVAQFSDWNPSHFLDVAEMTTGMAIGYDWLFEHLSSSARSQIRDAIKSKGIEPSFDS 534 ++ F FLI + +C K+E E D ++ HPRILLL EE I++ I +K+H AI+ E I+ + P++R+ +GRRLL SRE L+R F+LSYAYRMTG+D++LQRAEKE++AVA FSDWNPSHFLDVAEMT GMAIGYDWL++ LS+ +R I++AI +KGI PS DS Sbjct: 8 LLTFFFLIFSSFACEKNEGETQDEKESSHPRILLLKGEEQLIEQSIAASPVWKKMHDAILVECAYIIAKPPVERIQIGRRLLDKSRECLRRVFYLSYAYRMTGQDKYLQRAEKEMLAVAGFSDWNPSHFLDVAEMTMGMAIGYDWLYDKLSAESRETIKNAILNKGINPSLDS 180
BLAST of mRNA_C-australica_Contig_10333.1.1 vs. uniprot
Match: UPI001F3C451A (heparinase II/III family protein n=2 Tax=unclassified Maribellus TaxID=2678353 RepID=UPI001F3C451A) HSP 1 Score: 192 bits (487), Expect = 1.100e-54 Identity = 98/172 (56.98%), Postives = 127/172 (73.84%), Query Frame = 1 Query: 31 FLIIAIASCNKDEFEDI--DLSKAGHPRILLLANEEDQIKELIDRDEAMRKIHAAIMRESNRILGRDPLKRVMVGRRLLGTSRELLKRSFFLSYAYRMTGEDRFLQRAEKELVAVAQFSDWNPSHFLDVAEMTTGMAIGYDWLFEHLSSSARSQIRDAIKSKGIEPSFDSKY 540 F++ + C KD+ E+ + HPRILLL EE QIK+LI D K+H AI+ E ++IL + P++RV++GRRLL SRE L+R F+LSYAYRMTG++ + RAE EL+AVA+FSDWNPSHFLDVAEMT GMAIGYDWL++ L +R +I +AI SKG+ PSFDSKY Sbjct: 13 FMLFSSFGCVKDDAENNQGEAKSINHPRILLLKGEEQQIKDLIASDPTWAKMHQAILTECSKILAKSPVERVLIGRRLLDKSRECLRRVFYLSYAYRMTGKEVYFIRAESELLAVAEFSDWNPSHFLDVAEMTMGMAIGYDWLYDKLPEDSREKISEAIVSKGLYPSFDSKY 184
BLAST of mRNA_C-australica_Contig_10333.1.1 vs. uniprot
Match: A0A2D0N9S0_9BACT (Heparinase n=1 Tax=Flavilitoribacter nigricans DSM 23189 = NBRC 102662 TaxID=1122177 RepID=A0A2D0N9S0_9BACT) HSP 1 Score: 187 bits (475), Expect = 5.920e-53 Identity = 91/169 (53.85%), Postives = 127/169 (75.15%), Query Frame = 1 Query: 37 IIAIASCNKD-EFEDIDLSKAGHPRILLLANEEDQIKELIDRDEAMRKIHAAIMRESNRILGRDPLKRVMVGRRLLGTSRELLKRSFFLSYAYRMTGEDRFLQRAEKELVAVAQFSDWNPSHFLDVAEMTTGMAIGYDWLFEHLSSSARSQIRDAIKSKGIEPSFDSKY 540 ++ +++C K+ I + HP++LLL EE+QI LID D +++H AI++ N+ ++ L+R ++GRRLL SRE ++R F+LSYAYRMTG++RFL RAE E++AVA FSDWNPSHFLDVAEMT GMAIGYDWL+ L S+R++IR AI++KG+EPSFD+ Y Sbjct: 15 LLTLSACKKEASTPPISNDQGNHPQLLLLEGEEEQIHTLIDTDPVWQEVHFAILQACNKFFKKELLERKLIGRRLLSVSRECIRRVFYLSYAYRMTGDERFLARAEAEMLAVAGFSDWNPSHFLDVAEMTMGMAIGYDWLYHDLPESSRTKIRQAIRTKGLEPSFDNNY 183
BLAST of mRNA_C-australica_Contig_10333.1.1 vs. uniprot
Match: A0A6M0IJR4_9BACT (Heparinase n=1 Tax=Spirosoma agri TaxID=1987381 RepID=A0A6M0IJR4_9BACT) HSP 1 Score: 181 bits (460), Expect = 9.050e-51 Identity = 90/147 (61.22%), Postives = 116/147 (78.91%), Query Frame = 1 Query: 100 HPRILLLANEEDQIKELIDRDEAMRKIHAAIMRESNRILGRDPLKRVMVGRRLLGTSRELLKRSFFLSYAYRMTGEDRFLQRAEKELVAVAQFSDWNPSHFLDVAEMTTGMAIGYDWLFEHLSSSARSQIRDAIKSKGIEPSFDSKY 540 HPRILLL EE+ IK I D+ K+H AI+ ES+ +L PL+R+ +GRRLL TSRE L+R FFLSYA+RMT +D++L+RAEKEL+A++ FSDWNP+HFLDVAEMT ++IGYDWL+ LS S+RS I++AI KG+EPS DSKY Sbjct: 37 HPRILLLKGEEEAIKRTIGADKTWDKLHLAILTESDVLLESAPLERIQIGRRLLSTSREALRRLFFLSYAWRMTHQDKYLKRAEKELLALSAFSDWNPTHFLDVAEMTMAVSIGYDWLYNDLSESSRSVIKEAILKKGLEPSLDSKY 183
BLAST of mRNA_C-australica_Contig_10333.1.1 vs. uniprot
Match: A0A6I6JR38_9BACT (DUF4962 domain-containing protein n=2 Tax=Maribellus TaxID=2678352 RepID=A0A6I6JR38_9BACT) HSP 1 Score: 181 bits (459), Expect = 1.060e-50 Identity = 95/173 (54.91%), Postives = 119/173 (68.79%), Query Frame = 1 Query: 22 MFVFLIIAIASCNKDEFEDIDLSKAGHPRILLLANEEDQIKELIDRDEAMRKIHAAIMRESNRILGRDPLKRVMVGRRLLGTSRELLKRSFFLSYAYRMTGEDRFLQRAEKELVAVAQFSDWNPSHFLDVAEMTTGMAIGYDWLFEHLSSSARSQIRDAIKSKGIEPSFDSKY 540 +F+F I + SC + K+GHP ILLL EE I+ I+ E K+H AI+ ES IL + +R+ +GRRLLGTSRE L+R F+LSYAYRMTG+DRF +RAEKE+V A FSDWNPSHFLDV EMT +AIGYDWLF+ LS ++ I+ AI KGIEPSF+ Y Sbjct: 10 VFIFFIAFLISCQE---------KSGHPGILLLDGEEKSIQNQIESSETWGKVHEAIIGESENILQSELHERIKIGRRLLGTSREYLRRVFYLSYAYRMTGDDRFAKRAEKEMVKAAGFSDWNPSHFLDVGEMTMALAIGYDWLFDELSEESKEIIKKAIVEKGIEPSFNEDY 173
BLAST of mRNA_C-australica_Contig_10333.1.1 vs. uniprot
Match: A0A3B7MGF7_9BACT (DUF4962 domain-containing protein n=1 Tax=Paraflavitalea soli TaxID=2315862 RepID=A0A3B7MGF7_9BACT) HSP 1 Score: 181 bits (459), Expect = 1.280e-50 Identity = 89/148 (60.14%), Postives = 113/148 (76.35%), Query Frame = 1 Query: 97 GHPRILLLANEEDQIKELIDRDEAMRKIHAAIMRESNRILGRDPLKRVMVGRRLLGTSRELLKRSFFLSYAYRMTGEDRFLQRAEKELVAVAQFSDWNPSHFLDVAEMTTGMAIGYDWLFEHLSSSARSQIRDAIKSKGIEPSFDSKY 540 HPRILLL EE I++ I D RK+H AI+ ES+ I+ + P++R+ +GRRLL SRE ++R FFLSYAYR TG+ + QRAEKE++A+A FSDWNPSHFLDVAEMT MAIGYDWL++ LS +AR+ I++AI KGIEPS D KY Sbjct: 36 AHPRILLLKGEEKAIQKTIAADNNWRKVHQAILTESDAIVNKPPIERIQIGRRLLDKSREAIRRIFFLSYAYRTTGQSVYQQRAEKEMLAIAAFSDWNPSHFLDVAEMTMAMAIGYDWLYDQLSPAARTAIKEAILKKGIEPSLDPKY 183
BLAST of mRNA_C-australica_Contig_10333.1.1 vs. uniprot
Match: UPI00168BE4E7 (heparinase II/III family protein n=1 Tax=Spirosoma validum TaxID=2771355 RepID=UPI00168BE4E7) HSP 1 Score: 180 bits (457), Expect = 2.420e-50 Identity = 89/149 (59.73%), Postives = 117/149 (78.52%), Query Frame = 1 Query: 94 AGHPRILLLANEEDQIKELIDRDEAMRKIHAAIMRESNRILGRDPLKRVMVGRRLLGTSRELLKRSFFLSYAYRMTGEDRFLQRAEKELVAVAQFSDWNPSHFLDVAEMTTGMAIGYDWLFEHLSSSARSQIRDAIKSKGIEPSFDSKY 540 A HPRILLL + E I+ ID D+ ++H AI+ E + +L PL+R+ +GRRLL TSRE L+R FFLSYA+RMT +D++LQR EKEL+AV+ FSDWNP+HFLDVAEMT ++IGYDWL+ +LS S+RS I+ AI++KGIEPS D+KY Sbjct: 33 ADHPRILLLKDGEKGIQRTIDSDKTWAQMHQAILTECDALLAVAPLERIQIGRRLLSTSREALRRLFFLSYAWRMTRQDKYLQRGEKELLAVSNFSDWNPTHFLDVAEMTMAVSIGYDWLYPNLSESSRSTIKTAIRTKGIEPSLDTKY 181
BLAST of mRNA_C-australica_Contig_10333.1.1 vs. uniprot
Match: A0A286FIB6_9BACT (Heparinase II/III-like protein n=1 Tax=Spirosoma fluviale TaxID=1597977 RepID=A0A286FIB6_9BACT) HSP 1 Score: 180 bits (457), Expect = 2.450e-50 Identity = 87/148 (58.78%), Postives = 114/148 (77.03%), Query Frame = 1 Query: 97 GHPRILLLANEEDQIKELIDRDEAMRKIHAAIMRESNRILGRDPLKRVMVGRRLLGTSRELLKRSFFLSYAYRMTGEDRFLQRAEKELVAVAQFSDWNPSHFLDVAEMTTGMAIGYDWLFEHLSSSARSQIRDAIKSKGIEPSFDSKY 540 GHPR+LLL+ EED +K I D+ K+H AI+ E ++++G +PLKR+ +GRRLL SRE L+R F+LSYA+RMT + +LQRAE EL+ +A FSDWNP+HFLDVAEMT ++IGYDWL+ LS +RS I++AI KGIEPS DSKY Sbjct: 36 GHPRLLLLSGEEDALKRTISADKTWEKLHQAIVAECDQLVGIEPLKRIQIGRRLLDKSREALRRIFYLSYAWRMTHQLNYLQRAETELLTIAAFSDWNPTHFLDVAEMTMAVSIGYDWLYNDLSEQSRSTIKEAILKKGIEPSMDSKY 183
BLAST of mRNA_C-australica_Contig_10333.1.1 vs. uniprot
Match: A0A7Y1V3Y0_9BACT (Heparinase n=1 Tax=Saprospiraceae bacterium TaxID=2202734 RepID=A0A7Y1V3Y0_9BACT) HSP 1 Score: 180 bits (456), Expect = 2.980e-50 Identity = 93/180 (51.67%), Postives = 125/180 (69.44%), Query Frame = 1 Query: 7 LSKIIMFVFLIIAIASCNKDEFEDI--DLSKAGHPRILLLANEEDQIKELIDRDEAMRKIHAAIMRESNRILGRDPLKRVMVGRRLLGTSRELLKRSFFLSYAYRMTGEDRFLQRAEKELVAVAQFSDWNPSHFLDVAEMTTGMAIGYDWLFEHLSSSARSQIRDAIKSKGIEPSFDSKY 540 + K+I+ F + + CNK + + + HP IL+ A+EE I +LI++D +HA+I++E NRILG++ LKR MVGRRLL TSRELL R F LSY +RMTG++RF +A +E++A A F+DWNPSHFLDVAEMT GMAIGYDWL++ LS R I +I KG+ PS+DS Y Sbjct: 1 MKKLILLCFSVATLVGCNKSSLDKPAEEHTLVEHPTILMHADEEAIISDLIEKDATWYSLHASILKECNRILGKEVLKRKMVGRRLLATSRELLSRVFQLSYGFRMTGDERFSLKAIEEMLAAAAFTDWNPSHFLDVAEMTMGMAIGYDWLYKELSEEDRKVISGSIAHKGLRPSYDSDY 180 The following BLAST results are available for this feature:
BLAST of mRNA_C-australica_Contig_10333.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-australica_Contig_10333.1.1 >prot_C-australica_Contig_10333.1.1 ID=prot_C-australica_Contig_10333.1.1|Name=mRNA_C-australica_Contig_10333.1.1|organism=Chrysoparadoxa australica CS_1217|type=polypeptide|length=173bp MFVFLIIAIASCNKDEFEDIDLSKAGHPRILLLANEEDQIKELIDRDEAMback to top mRNA from alignment at C-australica_Contig_10333:4..543- Legend: UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-australica_Contig_10333.1.1 ID=mRNA_C-australica_Contig_10333.1.1|Name=mRNA_C-australica_Contig_10333.1.1|organism=Chrysoparadoxa australica CS_1217|type=mRNA|length=540bp|location=Sequence derived from alignment at C-australica_Contig_10333:4..543- (Chrysoparadoxa australica CS_1217)back to top Coding sequence (CDS) from alignment at C-australica_Contig_10333:4..543- >mRNA_C-australica_Contig_10333.1.1 ID=mRNA_C-australica_Contig_10333.1.1|Name=mRNA_C-australica_Contig_10333.1.1|organism=Chrysoparadoxa australica CS_1217|type=CDS|length=519bp|location=Sequence derived from alignment at C-australica_Contig_10333:4..543- (Chrysoparadoxa australica CS_1217)back to top |