Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Stop | 1 |
| Start | 1 |
| Model size | 1269 |
| Hectar predicted targeting category | other localisation |
| Exons | 8 |
| Cds size | 858 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1682586770.6089365-UTR-C-australica_Contig_1033:13245..13569 | 1682586770.6089365-UTR-C-australica_Contig_1033:13245..13569 | Chrysoparadoxa australica CS_1217 | UTR | C-australica_Contig_1033 13246..13569 - |
| 1682586770.7083852-UTR-C-australica_Contig_1033:15512..15599 | 1682586770.7083852-UTR-C-australica_Contig_1033:15512..15599 | Chrysoparadoxa australica CS_1217 | UTR | C-australica_Contig_1033 15513..15599 - |
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1682586770.6202443-CDS-C-australica_Contig_1033:13569..13686 | 1682586770.6202443-CDS-C-australica_Contig_1033:13569..13686 | Chrysoparadoxa australica CS_1217 | CDS | C-australica_Contig_1033 13570..13686 - |
| 1682586770.630863-CDS-C-australica_Contig_1033:13898..14023 | 1682586770.630863-CDS-C-australica_Contig_1033:13898..14023 | Chrysoparadoxa australica CS_1217 | CDS | C-australica_Contig_1033 13899..14023 - |
| 1682586770.641004-CDS-C-australica_Contig_1033:14196..14290 | 1682586770.641004-CDS-C-australica_Contig_1033:14196..14290 | Chrysoparadoxa australica CS_1217 | CDS | C-australica_Contig_1033 14197..14290 - |
| 1682586770.6504576-CDS-C-australica_Contig_1033:14476..14636 | 1682586770.6504576-CDS-C-australica_Contig_1033:14476..14636 | Chrysoparadoxa australica CS_1217 | CDS | C-australica_Contig_1033 14477..14636 - |
| 1682586770.6662405-CDS-C-australica_Contig_1033:14885..15001 | 1682586770.6662405-CDS-C-australica_Contig_1033:14885..15001 | Chrysoparadoxa australica CS_1217 | CDS | C-australica_Contig_1033 14886..15001 - |
| 1682586770.6776404-CDS-C-australica_Contig_1033:15073..15146 | 1682586770.6776404-CDS-C-australica_Contig_1033:15073..15146 | Chrysoparadoxa australica CS_1217 | CDS | C-australica_Contig_1033 15074..15146 - |
| 1682586770.6871593-CDS-C-australica_Contig_1033:15262..15309 | 1682586770.6871593-CDS-C-australica_Contig_1033:15262..15309 | Chrysoparadoxa australica CS_1217 | CDS | C-australica_Contig_1033 15263..15309 - |
| 1682586770.6982856-CDS-C-australica_Contig_1033:15386..15512 | 1682586770.6982856-CDS-C-australica_Contig_1033:15386..15512 | Chrysoparadoxa australica CS_1217 | CDS | C-australica_Contig_1033 15387..15512 - |
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-australica_Contig_1033.3.1 >prot_C-australica_Contig_1033.3.1 ID=prot_C-australica_Contig_1033.3.1|Name=mRNA_C-australica_Contig_1033.3.1|organism=Chrysoparadoxa australica CS_1217|type=polypeptide|length=286bp
MSDFNSRTKELLTYCNRTALSCIYCKEPKLAAAYYLLQKAYMVASQKLPA
SAGQDQIRQAQNWQASILNNLGCLYFELGGLEGSATWFAKAAKCCRDASP
PLADRIKVNAAMVLLQAGRHRQASILARRALEERAGKEDPAAGSAAEASG
SDGEELPRVGLTLQALQVEADVQEHDGAWLASLQLRDRAVAMSERHLADA
HIITSALQRAALKCSREVRRQDLRLWRRVDDGKKRNSLLHFGRRLGELSE
WSVLEGIESPVDLDDPMPVSFPPEFLKSSPPTMFA* back to topmRNA from alignment at C-australica_Contig_1033:13246..15599- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_C-australica_Contig_1033.3.1 ID=mRNA_C-australica_Contig_1033.3.1|Name=mRNA_C-australica_Contig_1033.3.1|organism=Chrysoparadoxa australica CS_1217|type=mRNA|length=2354bp|location=Sequence derived from alignment at C-australica_Contig_1033:13246..15599- (Chrysoparadoxa australica CS_1217)
GAGAGGAGAAAAACGAAGACATGAGAGCAGGGCCAGCCTGATGTCCCTTT
CATTATGCTTAGTCTGCATCACTAAACGATAAGGGAAATGAGCGACTTCA
ATAGCCGGACTAAGGAGCTCCTCACGTACTGCAATAGAACAGCTCTCAGC
TGCATTTATTGCAAGGAGCCAAAGCTCGCAGCTGCCTACTATCTGCTGCA
GAAAGCTTACATGGTACCCCTCAGCCTCTCTCGTGCTTTTACCTAACACC
ATCCTGCTACATAATCACATGATTCCTCTGTCCTTGGCAGGTTGCATCTC
AGAAGCTTCCAGCCTCAGCCGGGCAGGATCAAATTAGGTGAGTGAGCTTG
CAGCCTGAGCCTCAACATTTCATTTGGCCATAGCTTGCCACAGGCAGCCT
CGAGCTCAACGGCAGTGTTAGCCTACCTCAGCACTGCTATTTGCCCATTG
CAGGCAGGCACAGAACTGGCAGGCCAGCATCCTCAACAACCTTGGTTGCC
TCTATTTTGAGCTAGGAGGGCTTGAGGTAGGGCGTGTTTGAGCCCGCCCA
CCCACCCACTCCCATGTCATATTCCCTTACACCTCCCTTTCGCTGTAGGG
ATCGGCTACATGGTTTGCCAAAGCTGCCAAGTGTTGCAGGGACGCTTCAC
CACCACTTGCAGACAGGATAAAGGTGAATGCGGCAATGGTGTTGCTGCAA
GCTGGCAGGCACAGGTAAGACTAGTAGAGCAATAACTCGACTCAGCCTTT
ATGCCCGTACCGGGCTTGACACTGCAACATGTCTCATGCCGTACAACAGA
AACCAAACTCATCATGATATATTAGCTACCTCTCCATCAATCAACGAATG
GATGTGCTGGGTGCTTAGCTCGCTTTCTGCTGCGATGCATGCCTTTCCCA
TGCTGTGCATCACCTACCTACTCCCTCTCACTCCCGGCATTATCCTCTCA
TCCCACGCGATAGGCAAGCTTCCATCCTAGCCAGGAGGGCTCTGGAGGAG
CGGGCGGGGAAAGAAGATCCAGCTGCGGGGTCAGCTGCCGAGGCCTCAGG
GTCTGATGGGGAGGAGCTTCCTCGCGTGGGACTCACGCTCCAGGCACTTC
AAGTGGAGGCGGATGTGCAAGAGGTAAGCTAACAGAGCACACAAGCCTTC
TCTTTGCGCTAAACATGGTTCACTTCTTTCAGTTTGCTCCTTTGGGAGCT
TTTCTATCAAGCCAGTAGCTTCTAACCTTCCATGATGCTGGCATGCTGCT
CCCCCTAAAGCAAGCAACCTAGCTCATTCACGGGTCTTGGCATCTCCTGC
TCATCTCAGCACGATGGTGCATGGCTGGCCTCCCTGCAGCTCAGGGATCG
TGCAGTGGCGATGAGCGAAAGGCACCTTGCCGATGCCCACATCATCACAT
CAGGTGAAGCTCCTACCCGTACTCCAACCCTTAGAACTAGCTGGCTAATT
CTGACCTCAACCAGTAGTCTAACTGGTTAACCCTAACCCAACCAAACCTA
GCCGAGCCCAGTCAAACAGCCTGCTGCATCTGTTAGCTCAGCTGCTGCTC
TTCTTCTCTTCTTCTCTGGACCTCAGCTCTTCAACGCGCAGCACTCAAAT
GCTCTCGCGAGGTGAGGCGGCAGGACCTGAGGTTGTGGCGGAGAGTTGAT
GATGGCAAGAAAAGGAACTCGCTGCTGCACTTCGGGAGAAGACTGGGGGA
GGTGGAGGACTTATCACTGACCTCGCCGTTGCTTTTCTAAATACCCCACT
AGGATCTGCTCACCTCGATGAAAGGCTGCTTCTGATTTCCTTCCAAGGAA
CTAACTAACCTGATTCTGAGTCACTGAAGGATTGAGATGACATAATAGCT
GGTGCACACCAATCAGTCGTTTGCTCACACAAAGCCCTAAACCCCTTCCC
CTTCCTGCAATAGCTGTCAGAGTGGAGCGTATTGGAAGGCATTGAGAGCC
CAGTGGATCTCGATGACCCCATGCCAGTCTCCTTTCCGCCAGAGTTTCTC
AAGAGCTCTCCCCCAACCATGTTTGCGTGACGCTGGGTCAGTAGCAACGC
TGGGCTGAGGACAACGAAGCATACAGAGAGGCCTCGCTTGACCCTTACTA
TGGCCTCTATGCTGAGCTTTAGCGATAGGATAACTGATAACTGTTGCCAA
GGCACCTGGCGATGAGTGCATGGTAGTCATGCAGCCATTGGGATTCGGGA
TAGAGCAAGTCAATTGAAGTGGCAAGGCTTTAGGTTGGTCAGGCGCCACG
ATGCAGGCAGCTCCATGGCCCGGCTGGAGGAGATTTCATGTCTTTGTCTA
TGAAAACTTGACTATGATGTATATATATTACAAGAAGTGTATGTGCACGA
AAAG back to topCoding sequence (CDS) from alignment at C-australica_Contig_1033:13246..15599- >mRNA_C-australica_Contig_1033.3.1 ID=mRNA_C-australica_Contig_1033.3.1|Name=mRNA_C-australica_Contig_1033.3.1|organism=Chrysoparadoxa australica CS_1217|type=CDS|length=858bp|location=Sequence derived from alignment at C-australica_Contig_1033:13246..15599- (Chrysoparadoxa australica CS_1217)
ATGAGCGACTTCAATAGCCGGACTAAGGAGCTCCTCACGTACTGCAATAG
AACAGCTCTCAGCTGCATTTATTGCAAGGAGCCAAAGCTCGCAGCTGCCT
ACTATCTGCTGCAGAAAGCTTACATGGTTGCATCTCAGAAGCTTCCAGCC
TCAGCCGGGCAGGATCAAATTAGGCAGGCACAGAACTGGCAGGCCAGCAT
CCTCAACAACCTTGGTTGCCTCTATTTTGAGCTAGGAGGGCTTGAGGGAT
CGGCTACATGGTTTGCCAAAGCTGCCAAGTGTTGCAGGGACGCTTCACCA
CCACTTGCAGACAGGATAAAGGTGAATGCGGCAATGGTGTTGCTGCAAGC
TGGCAGGCACAGGCAAGCTTCCATCCTAGCCAGGAGGGCTCTGGAGGAGC
GGGCGGGGAAAGAAGATCCAGCTGCGGGGTCAGCTGCCGAGGCCTCAGGG
TCTGATGGGGAGGAGCTTCCTCGCGTGGGACTCACGCTCCAGGCACTTCA
AGTGGAGGCGGATGTGCAAGAGCACGATGGTGCATGGCTGGCCTCCCTGC
AGCTCAGGGATCGTGCAGTGGCGATGAGCGAAAGGCACCTTGCCGATGCC
CACATCATCACATCAGCTCTTCAACGCGCAGCACTCAAATGCTCTCGCGA
GGTGAGGCGGCAGGACCTGAGGTTGTGGCGGAGAGTTGATGATGGCAAGA
AAAGGAACTCGCTGCTGCACTTCGGGAGAAGACTGGGGGAGCTGTCAGAG
TGGAGCGTATTGGAAGGCATTGAGAGCCCAGTGGATCTCGATGACCCCAT
GCCAGTCTCCTTTCCGCCAGAGTTTCTCAAGAGCTCTCCCCCAACCATGT
TTGCGTGA back to top
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