mRNA_C-australica_Contig_1033.1.10 (mRNA) Chrysoparadoxa australica CS_1217

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_C-australica_Contig_1033.1.10
Unique NamemRNA_C-australica_Contig_1033.1.10
TypemRNA
OrganismChrysoparadoxa australica CS_1217 (Chrysoparadoxa australica CS_1217)
Homology
BLAST of mRNA_C-australica_Contig_1033.1.10 vs. uniprot
Match: D8LCZ8_ECTSI (3-methyl-2-oxobutanoate hydroxymethyltransferase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LCZ8_ECTSI)

HSP 1 Score: 460 bits (1184), Expect = 3.260e-157
Identity = 229/306 (74.84%), Postives = 266/306 (86.93%), Query Frame = 3
Query:  396 MDVLRVARESNRKLTMATAYSYPSALHVCRAGMDMLLVGDSVGMVELGYDTTQPVTVEEMLHHCKAVARGAKTPLLIGDLPFGSYEASPEQAHRTAIRFVKEGSMDAVKLEGGASRVEHIRRIVDGGIAVVGHVGLTPQSISVLGGFRAQGRTAVKARQLVDDALAVQDAGAFAVVVECVPSTVAKAITDAVEIPTIGIGAGGSTSGQVLVYHDMLGMLQHPHHAQFVPKFCKRFANVGEQVNAGLLAYRAEVESGVYPGSAYSPYTMSSKEEHSLAELLAKDELERQEKLALARKKLHDQDEYEV 1313
            MDV+++ R   RK+TM TAY YPSA+HVCRAG+D+LLVGDSVGMVELGYDTTQPVTV +MLHHCKAV RGA+TPL++ D+PFGSYE SP++A RTAIRFVKEG++DAVKLEGG +R EHIR++VDGGIAV+GHVGLTPQ+ISVLGGFRAQGRTAVKARQ+VDDALAVQ+AGAFAVVVECVPS VAKA+T+A+EIPTIGIGAG  TSGQVLVYHDMLGMLQHPHHAQFVP+FCK +A+VGE+V  GL  +R EVE GV+P   +SPY M + EE     LLAKDE ER E+LAL +K L +QDEYE 
Sbjct:    1 MDVVKIRRRGERKVTMVTAYDYPSAVHVCRAGIDILLVGDSVGMVELGYDTTQPVTVGDMLHHCKAVGRGARTPLVVADMPFGSYEVSPKEALRTAIRFVKEGNVDAVKLEGGKNRAEHIRKVVDGGIAVMGHVGLTPQAISVLGGFRAQGRTAVKARQVVDDALAVQEAGAFAVVVECVPSPVAKAVTEALEIPTIGIGAGPCTSGQVLVYHDMLGMLQHPHHAQFVPRFCKNYASVGEEVRRGLENFRREVEGGVFPQEEHSPYKMPAGEEQQFKRLLAKDEHERLERLALKKKALEEQDEYET 306          
BLAST of mRNA_C-australica_Contig_1033.1.10 vs. uniprot
Match: A0A835Z145_9STRA (3-methyl-2-oxobutanoate hydroxymethyltransferase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z145_9STRA)

HSP 1 Score: 402 bits (1034), Expect = 6.830e-135
Identity = 203/310 (65.48%), Postives = 243/310 (78.39%), Query Frame = 3
Query:  396 MDVLRVARESNRKLTMATAYSYPSALHVCRAGMDMLLVGDSVGMVELGYDTTQPVTVEEMLHHCKAVARGAKTPLLIGDLPFGSYEASPEQAHRTAIRFVKEGSMDAVKLEGGASRVEHIRRIVDGGIAVVGHVGLTPQSISVLGGFRAQGRTAVKARQLVDDALAVQDAGAFAVVVECVPSTVAKAITDAVEIPTIGIGAGGSTSGQVLVYHDMLGMLQHPHHAQFVPKFCKRFANVGEQVNAGLLAYRAEVESGVYPGSAYSPYTMSSKEEHSLAELLAKDELERQEKLALARKKLHDQDEYEVTKLY 1325
            M VL++ARE  RK+TM TAY YPS++HVC AG+D+ LVGDSVGMV LGY+TTQPVTVEEMLHHC+AV RGA  PLL+GD+PFGSYE SPEQA +TA RFVKEG +DAVKLEGG +R EHI+RIV+GG+AV+GHVGLTPQ+ISVLGGFRAQGR+ +            Q+AGAFAVV+ECVP+ V +AI DA+EIP IGIGAG  T GQVLVYHDMLG+L HPHH +  PKFCK FA+V  +V  GL AYR EVE+G +PG+A+SPY M+  EE +   LLA D  ER+E   L +KKL +QDE E  +LY
Sbjct:    1 MTVLKLAREKKRKITMVTAYDYPSSVHVCEAGIDIALVGDSVGMVTLGYETTQPVTVEEMLHHCRAVKRGAAGPLLVGDMPFGSYEVSPEQALQTAYRFVKEGGVDAVKLEGGRTRTEHIKRIVEGGVAVMGHVGLTPQAISVLGGFRAQGRSVI------------QEAGAFAVVLECVPAVVGRAIADALEIPVIGIGAGPHTDGQVLVYHDMLGILSHPHHQRMAPKFCKVFADVQTEVMKGLHAYRREVEAGAFPGAAHSPYAMTPAEEANFEHLLAHDARERREAAELTKKKLKEQDELEAVRLY 298          
BLAST of mRNA_C-australica_Contig_1033.1.10 vs. uniprot
Match: A0A7S2FBI3_9STRA (3-methyl-2-oxobutanoate hydroxymethyltransferase n=2 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2FBI3_9STRA)

HSP 1 Score: 383 bits (984), Expect = 2.210e-127
Identity = 192/307 (62.54%), Postives = 240/307 (78.18%), Query Frame = 3
Query:  405 LRVARESNRKLTMATAYSYPSALHVCRAGMDMLLVGDSVGMVELGYDTTQPVTVEEMLHHCKAVARGAKTPLLIGDLPFGSYEASPEQAHRTAIRFVKEGSMDAVKLEGGASRVEHIRRIVDGGIAVVGHVGLTPQSISVLGGFRAQGRTAVKARQLVDDALAVQDAGAFAVVVECVPSTVAKAITDAVEIPTIGIGAGGSTSGQVLVYHDMLGMLQHPHHAQFVPKFCKRFANVGEQVNAGLLAYRAEVESGVYPGSAYSPYTMSSKEEHSLAELLAKDELERQEKLALARKKLHDQDEYEVTKLY 1325
            L   +   ++++M TAY+YPSA+ V  A +D++LVGDSVGMVELGY+TTQPVT+E+MLHH KAV RG +  L++ DLPFGSYE SP QA ++A R VKEG  DAVKLEGG  R +  R IV GGIAV+GH+GLTPQ+ISV+GGFRAQGRT VKAR L+DDALA+QDAG FA+V+ECVP  VA+ IT+++EIPTIGIGAG  T+GQVLVYHDMLGML HPHH QFVPKFCK++A VG  +  GL A++++V+ G++P   ++PY MS KEE    EL+A+DE  RQ KL  A K+L D DEYE T +Y
Sbjct:    2 LLAMKRRGKRISMVTAYNYPSAVQVDLANIDVVLVGDSVGMVELGYETTQPVTLEDMLHHAKAVKRGVERSLIVVDLPFGSYEISPAQALQSAYRCVKEGGADAVKLEGGRDRADTCRSIVKGGIAVMGHIGLTPQAISVIGGFRAQGRTGVKARALLDDALALQDAGVFALVLECVPPQVAQVITESLEIPTIGIGAGPHTTGQVLVYHDMLGMLSHPHHEQFVPKFCKKYAEVGHAIRFGLDAFKSDVDQGLFPADEFTPYKMSDKEEIKFRELVAEDEGVRQSKLTRASKRLKDADEYEATHIY 308          
BLAST of mRNA_C-australica_Contig_1033.1.10 vs. uniprot
Match: W7TQW2_9STRA (3-methyl-2-oxobutanoate hydroxymethyltransferase n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TQW2_9STRA)

HSP 1 Score: 384 bits (986), Expect = 9.590e-127
Identity = 196/314 (62.42%), Postives = 242/314 (77.07%), Query Frame = 3
Query:  384 KTTVMDVLRVARESNRKLTMATAYSYPSALHVCRAGMDMLLVGDSVGMVELGYDTTQPVTVEEMLHHCKAVARGAKTPLLIGDLPFGSYEASPEQAHRTAIRFVKEGSMDAVKLEGGASRVEHIRRIVDGGIAVVGHVGLTPQSISVLGGFRAQGRTAVKARQLVDDALAVQDAGAFAVVVECVPSTVAKAITDAVEIPTIGIGAGGSTSGQVLVYHDMLGMLQHPHHAQFVPKFCKRFANVGEQVNAGLLAYRAEVESGVYPGSAYSPYTMSSKEEHSLAELLAKDELERQEKLALARKKLHDQDEYEVTKLY 1325
            K +V+D+L   R+ N++++M TAY YPSALHV  AG+D++L GDSV MVELGYDTTQPV +E+MLHHCKAVARG K  L++GD+PFGSYE S E A   A RF+KEG  DAVK+EGG  R   + +IV  GIAV+GHVGLTPQ+ISVLGGFRAQGRTAVKAR LVDDALA+Q+AGAFAVVVECVP+ VA+AIT+A+EIPTIGIGAG  T GQVLV+HDMLGM  HPHH  FVP+FCKR+A +G  +  GL +++ +VE+G +P  AYSPY M + E  +   L+A+D   RQ +   A ++L   DEYE  KLY
Sbjct:   61 KMSVLDLLHKKRK-NQRISMVTAYDYPSALHVDLAGIDIVLCGDSVAMVELGYDTTQPVDMEQMLHHCKAVARGTKRSLIVGDMPFGSYEVSEELAMTNAFRFIKEGFTDAVKIEGGRDRAHIVEKIVKNGIAVMGHVGLTPQAISVLGGFRAQGRTAVKARGLVDDALALQEAGAFAVVVECVPAPVAQAITEALEIPTIGIGAGPHTCGQVLVFHDMLGMTTHPHHEAFVPRFCKRYAQLGNVIREGLESFKQDVEAGTFPSEAYSPYKMPAAELRAFQALMAQDATSRQTQAHRAAERLKQSDEYEQIKLY 373          
BLAST of mRNA_C-australica_Contig_1033.1.10 vs. uniprot
Match: A0A4D9CXI1_9STRA (3-methyl-2-oxobutanoate hydroxymethyltransferase n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CXI1_9STRA)

HSP 1 Score: 377 bits (968), Expect = 3.420e-125
Identity = 191/295 (64.75%), Postives = 228/295 (77.29%), Query Frame = 3
Query:  441 MATAYSYPSALHVCRAGMDMLLVGDSVGMVELGYDTTQPVTVEEMLHHCKAVARGAKTPLLIGDLPFGSYEASPEQAHRTAIRFVKEGSMDAVKLEGGASRVEHIRRIVDGGIAVVGHVGLTPQSISVLGGFRAQGRTAVKARQLVDDALAVQDAGAFAVVVECVPSTVAKAITDAVEIPTIGIGAGGSTSGQVLVYHDMLGMLQHPHHAQFVPKFCKRFANVGEQVNAGLLAYRAEVESGVYPGSAYSPYTMSSKEEHSLAELLAKDELERQEKLALARKKLHDQDEYEVTKLY 1325
            M TAY YPSALHV  AG+D++L GDSV MVELGYDTTQPV +E+MLHHCKAVARG K  L++GD+PFGSYE S E A   A RF+KEG  DAVK+EGG  R   + +IV  GIAV+GHVGLTPQ+ISVLGGFRAQGRTAVKAR LVDDALA+Q+AGAFAVVVECVP+ VA+AIT+A+EIPTIGIGAG  T GQVLVYHDMLGM  HPHH  FVP+FCKR+A +G  +  GL +++ +VE+G +P  AYSPY M + E  +   L+A+D   RQ +   A ++L   DEYE  KLY
Sbjct:    1 MVTAYDYPSALHVDLAGIDIVLCGDSVAMVELGYDTTQPVDMEQMLHHCKAVARGTKRSLIVGDMPFGSYEVSEELAMTNAFRFIKEGFTDAVKIEGGRDRAHIVEKIVKNGIAVMGHVGLTPQAISVLGGFRAQGRTAVKARGLVDDALALQEAGAFAVVVECVPAPVAQAITEALEIPTIGIGAGPHTCGQVLVYHDMLGMTTHPHHEAFVPRFCKRYAQLGNVIREGLESFKQDVEAGTFPSEAYSPYKMPAAELRAFQALMAQDATSRQTQAHRAAERLKQSDEYEQIKLY 295          
BLAST of mRNA_C-australica_Contig_1033.1.10 vs. uniprot
Match: A0A7S3QJH1_9STRA (3-methyl-2-oxobutanoate hydroxymethyltransferase n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3QJH1_9STRA)

HSP 1 Score: 380 bits (976), Expect = 5.450e-124
Identity = 189/321 (58.88%), Postives = 244/321 (76.01%), Query Frame = 3
Query:  417 RESNRKLTMATAYSYPSALHVCRAGMDMLLVGDSVGMVELGYDTTQPVTVEEMLHHCKAVARG--------------AKTPLLIGDLPFGSYEASP-EQAHRTAIRFVKEGSMDAVKLEGGAS-RVEHIRRIVDGGIAVVGHVGLTPQSISVLGGFRAQGRTAVKARQLVDDALAVQDAGAFAVVVECVPSTVAKAITDAVEIPTIGIGAGGSTSGQVLVYHDMLGMLQHPHHAQFVPKFCKRFANVGEQVNAGLLAYRAEVESGVYPGSAYSPYTMSSKEEHSLAELLAKDELERQEKLALARKKLHDQDEYEVTKLY*G 1331
            +   +K+TM TAY +PSA+HV RA +DM+LVGDS  MVELGYDTTQP+T+++MLHHC+AV RG              AKTPLL+GD+PFGSYE +  + A + A RFVKEG MDA+KLEGG+  R + I+ +V+GG+AV+GH+GLTPQ+ISV+GGFRAQGRTA +AR+++D+AL +QDAGAF+VV+ECVPS VAKA+T+ +EIPTIGIGAGG TSGQVLVYHDMLGM+ HPHH +F+PKFCK +A VG  +  GL A++ EVE G +PG  YSPY M+  E+ +   LL +D +ER+ K   A +K+   DEYE   LY G
Sbjct:  137 KRRGKKITMVTAYDFPSAMHVQRANIDMILVGDSAAMVELGYDTTQPITLDQMLHHCQAVKRGVEASINGIKSKMEKAKTPLLVGDMPFGSYEYNDLDIALKNAYRFVKEGGMDAIKLEGGSKHRAKTIKHVVEGGVAVMGHIGLTPQAISVIGGFRAQGRTAARAREMIDEALRLQDAGAFSVVLECVPSNVAKAVTETLEIPTIGIGAGGGTSGQVLVYHDMLGMMSHPHHQEFMPKFCKSYAQVGHAITEGLDAFKKEVEDGTFPGEEYSPYLMNDDEKRAFEVLLEQDSIERERKHEEATRKMKQADEYEQLSLYGG 457          
BLAST of mRNA_C-australica_Contig_1033.1.10 vs. uniprot
Match: A0A7S2XAE6_9EUKA (3-methyl-2-oxobutanoate hydroxymethyltransferase (Fragment) n=2 Tax=Lotharella TaxID=74819 RepID=A0A7S2XAE6_9EUKA)

HSP 1 Score: 375 bits (962), Expect = 3.260e-123
Identity = 188/317 (59.31%), Postives = 238/317 (75.08%), Query Frame = 3
Query:  384 KTTVMDVLRVARESNRKLTMATAYSYPSALHVCRAGMDMLLVGDSVGMVELGYDTTQPVTVEEMLHHCKAVARGAKTPLLIGDLPFGSYEASPEQAHRTAIRFVKEGSMDAVKLEGGASRVEHIRRIVDGGIAVVGHVGLTPQSISVLGGFRAQGRTAVKARQLVDDALAVQDAGAFAVVVECVPSTVAKAITDAVEIPTIGIGAGGSTSGQVLVYHDMLGMLQHPHHAQFVPKFCKRFANVGEQVNAGLLAYRAEVESGVYPG-SAYSPYTMSSKEEHSLAELLAKDELERQEKLALARKKLHDQDEYEVTKLY*G 1331
            K + M+++   R   R +TM TAY YPSALH   AG+D++LVGDS GMVELGYDTTQPVT++EMLHH KAV RGAK PL++GDLPFG+YE SPEQA RTA RFVKE  +D VK+EGG        ++V+GG+AV+GH+GLTPQ ISVLGGFRAQGRTA+KAR+LVDDALA++DAG FA+V+ECVP  V +AIT+A+EIPTIGIG+G  T+GQVLVYHDMLGM  HPH+  F PKFCK+F ++GE +  GL  ++ EVESG +P    +SPY MS+KE+    E++         K  +  +K+ + DEY+V  LY G
Sbjct:   51 KMSAMELIAKRRRGER-ITMVTAYDYPSALHCDLAGIDVVLVGDSCGMVELGYDTTQPVTIDEMLHHAKAVVRGAKHPLIVGDLPFGTYEVSPEQAQRTAYRFVKEAGVDCVKMEGGRKMAPFASKVVNGGVAVMGHIGLTPQHISVLGGFRAQGRTAIKARELVDDALALEDAGCFAIVIECVPPQVGEAITEALEIPTIGIGSGPGTTGQVLVYHDMLGMTVHPHYKAFTPKFCKKFVDLGETIRQGLEGFKREVESGSFPSLQDHSPYKMSNKEQAMFEEMMKXXXXXXXXKHVINAEKMKNSDEYDVLNLYGG 366          
BLAST of mRNA_C-australica_Contig_1033.1.10 vs. uniprot
Match: A0A7S2UK27_9STRA (3-methyl-2-oxobutanoate hydroxymethyltransferase n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2UK27_9STRA)

HSP 1 Score: 367 bits (941), Expect = 5.020e-121
Identity = 189/297 (63.64%), Postives = 229/297 (77.10%), Query Frame = 3
Query:  441 MATAYSYPSALHVCRAGMDMLLVGDSVGMVELGYDTTQPVTVEEMLHHCKAVARGAKTPLLIGDLPFGSYEASPEQ-AHRTAIRFVKEGSMDAVKLEGGA-SRVEHIRRIVDGGIAVVGHVGLTPQSISVLGGFRAQGRTAVKARQLVDDALAVQDAGAFAVVVECVPSTVAKAITDAVEIPTIGIGAGGSTSGQVLVYHDMLGMLQHPHHAQFVPKFCKRFANVGEQVNAGLLAYRAEVESGVYPGSAYSPYTMSSKEEHSLAELLAKDELERQEKLALARKKLHDQDEYEVTKLY 1325
            M TAY YPSALHV RAGMD+LLVGDS  MVELGYDTTQP+T+++MLHHC+AV RGA   LL+ D+PFG+YE S    A R A R +KE  MDAVKLEGG+ +R   +R +V+GG+AV+GHVGLTPQ+ISV+GGFRAQGRTA +AR L+D+AL ++DAGAFAVV+ECVP  VA+AIT ++EIPTIGIGAG  TSGQVLVYHDMLGML HPHH QF+PKFCKR+A VG  +  GL  ++A+VESG +PG+ YSPY M+  E+    +LLA D  ER+       KKL   DEYE   LY
Sbjct:    1 MVTAYDYPSALHVDRAGMDVLLVGDSCAMVELGYDTTQPMTLDQMLHHCQAVKRGASRSLLVADMPFGTYEYSDTDIALRNAYRLIKEAGMDAVKLEGGSKARATTVRTLVEGGVAVMGHVGLTPQAISVIGGFRAQGRTATRARALLDEALRLEDAGAFAVVLECVPGNVAEAITKSLEIPTIGIGAGAGTSGQVLVYHDMLGMLSHPHHEQFMPKFCKRYAQVGHAIKDGLEEFKADVESGEFPGNEYSPYKMNESEKELFDDLLASDADERKLHHEDNAKKLKQADEYEQLSLY 297          
BLAST of mRNA_C-australica_Contig_1033.1.10 vs. uniprot
Match: A0A448ZNZ8_9STRA (3-methyl-2-oxobutanoate hydroxymethyltransferase n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448ZNZ8_9STRA)

HSP 1 Score: 365 bits (938), Expect = 1.760e-119
Identity = 189/313 (60.38%), Postives = 237/313 (75.72%), Query Frame = 3
Query:  405 LRVARESNRKLTMATAYSYPSALHVCRAGMDMLLVGDSVGMVELGYDTTQPVTVEEMLHHCKAVARGAKTP----LLIGDLPFGSYE-ASPEQAHRTAIRFVKEGSMDAVKLEGGA-SRVEHIRRIVDGGIAVVGHVGLTPQSISVLGGFRAQGRTAVKARQLVDDALAVQDAGAFAVVVECVPSTVAKAITDAVEIPTIGIGAGGSTSGQVLVYHDMLGMLQHPHHAQFVPKFCKRFANVGEQVNAGLLAYRAEVESGVYPGSAYSPYTMSSKEEHSLAELLAKDELERQEKLALARKKLHDQDEYEVTKLY 1325
            L   +   +K+TM TAY +PSA HV RAG+DM+LVGDSV MVELG++TTQ V+++ M+HHC++V RG +      +L+GD+PFG+YE    + A R A RFVKE   DAVKLEGG+  R +  ++IVDGG+AV+GHVGLTPQ+ISV+GGFRAQGRTAV+ARQL+DDAL +QDAG F+VV+ECVP+ VA AIT+ +EIPTIGIGAGG TSGQVLV+HDMLGML HPHH QFVPKFCK++A VG  +  GL  ++AEVES  +PG+ YSPY MS  E+ +   LL  D  ER+ K  +A  KL   DEYE  KLY
Sbjct:   54 LNAKKRKGKKITMVTAYDFPSAAHVGRAGIDMVLVGDSVAMVELGHETTQNVSIDSMIHHCQSVKRGLELADSGSMLVGDMPFGTYEYEDTDVALRNAYRFVKEAGCDAVKLEGGSIHRAKTAQKIVDGGVAVMGHVGLTPQAISVIGGFRAQGRTAVRARQLLDDALRLQDAGCFSVVLECVPANVAAAITETLEIPTIGIGAGGDTSGQVLVFHDMLGMLSHPHHQQFVPKFCKKYAQVGHAIQDGLSRFKAEVESETFPGTEYSPYLMSDGEKEAFDALLESDAEERRIKHDVAATKLSQADEYETLKLY 366          
BLAST of mRNA_C-australica_Contig_1033.1.10 vs. uniprot
Match: A0A7S2N560_9STRA (3-methyl-2-oxobutanoate hydroxymethyltransferase (Fragment) n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2N560_9STRA)

HSP 1 Score: 367 bits (942), Expect = 4.510e-119
Identity = 189/312 (60.58%), Postives = 239/312 (76.60%), Query Frame = 3
Query:  384 KTTVMDVLRVARESNRKLTMATAYSYPSALHVCRAGMDMLLVGDSVGMVELGYDTTQPVTVEEMLHHCKAVARGAKT-PLLIGDLPFGSYE-ASPEQAHRTAIRFVKEGSMDAVKLEGG-ASRVEHIRRIVDGGIAVVGHVGLTPQSISVLGGFRAQGRTAVKARQLVDDALAVQDAGAFAVVVECVPSTVAKAITDAVEIPTIGIGAGGSTSGQVLVYHDMLGMLQHPHHAQFVPKFCKRFANVGEQVNAGLLAYRAEVESGVYPGSAYSPYTMSSKEEHSLAELLAKDELERQEKLALARKKLHDQDEYE 1310
            K T + +    R  N K+TM TAY YPSA+HV RAG+D++LVGDS  MVELG++TTQP+T++EM+HHCKAV RGA   PLL+GD+P GSYE    + A R A R +K+G MDAVKLEGG A+R    +++V+GG+AV+GHVGLTPQ+ISV+GGFRAQGRTA +AR L+D+A+ +QDAGAFA+V+ECVP+ VAK ITD +EIPTIGIGAG  TSGQVLV+HDMLGML HPHH +FVPKFCKR+A VG  +  GL  +R +VE G +P   YSPY M+ +E+ +   LLAKDE +R+ K     KKL + DEYE
Sbjct:  133 KVTTLSLTSKKRHGN-KITMVTAYDYPSAVHVDRAGIDIVLVGDSCAMVELGFETTQPITLDEMIHHCKAVKRGAPNRPLLVGDMPLGSYEYEDSDVALRNAYRMLKDGGMDAVKLEGGSAARANTTKKLVEGGVAVMGHVGLTPQAISVIGGFRAQGRTATRARSLLDEAMRLQDAGAFAIVLECVPANVAKVITDTLEIPTIGIGAGAGTSGQVLVFHDMLGMLSHPHHEEFVPKFCKRYARVGHYITKGLEEFRHDVEQGDFPSEEYSPYVMTEEEKEAFDLLLAKDEEDRRTKHDETIKKLTEADEYE 443          
The following BLAST results are available for this feature:
BLAST of mRNA_C-australica_Contig_1033.1.10 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LCZ8_ECTSI3.260e-15774.843-methyl-2-oxobutanoate hydroxymethyltransferase n... [more]
A0A835Z145_9STRA6.830e-13565.483-methyl-2-oxobutanoate hydroxymethyltransferase n... [more]
A0A7S2FBI3_9STRA2.210e-12762.543-methyl-2-oxobutanoate hydroxymethyltransferase n... [more]
W7TQW2_9STRA9.590e-12762.423-methyl-2-oxobutanoate hydroxymethyltransferase n... [more]
A0A4D9CXI1_9STRA3.420e-12564.753-methyl-2-oxobutanoate hydroxymethyltransferase n... [more]
A0A7S3QJH1_9STRA5.450e-12458.883-methyl-2-oxobutanoate hydroxymethyltransferase n... [more]
A0A7S2XAE6_9EUKA3.260e-12359.313-methyl-2-oxobutanoate hydroxymethyltransferase (... [more]
A0A7S2UK27_9STRA5.020e-12163.643-methyl-2-oxobutanoate hydroxymethyltransferase n... [more]
A0A448ZNZ8_9STRA1.760e-11960.383-methyl-2-oxobutanoate hydroxymethyltransferase n... [more]
A0A7S2N560_9STRA4.510e-11960.583-methyl-2-oxobutanoate hydroxymethyltransferase (... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-australica_Contig_1033contigC-australica_Contig_1033:279..3476 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Chrysoparadoxa australica CS_1217 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D8LCZ8
Preferred namePANB
PFAMsPantoate_transf
Model size1605
Max annot lvl2759|Eukaryota
KEGG rclassRC00022,RC00200
KEGG koko:K00606
KEGG ReactionR01226
KEGG Pathwayko00770,ko01100,ko01110,map00770,map01100,map01110
KEGG ModuleM00119
Hectar predicted targeting categorymitochondrion
Exons13
Evalue4e-160
EggNOG OGsCOG0413@1|root,KOG2949@2759|Eukaryota
Ec32 ortholog descriptionPyruvate/Phosphoenolpyruvate kinase-like domain
Ec32 orthologEc-01_001700.1
EC2.1.2.11
Description3-methyl-2-oxobutanoate hydroxymethyltransferase activity
Cds size1083
COG categoryH
BRITEko00000,ko00001,ko00002,ko01000
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1682586770.7393143-UTR-C-australica_Contig_1033:278..5231682586770.7393143-UTR-C-australica_Contig_1033:278..523Chrysoparadoxa australica CS_1217UTRC-australica_Contig_1033 279..523 +
1682586770.897982-UTR-C-australica_Contig_1033:3199..34761682586770.897982-UTR-C-australica_Contig_1033:3199..3476Chrysoparadoxa australica CS_1217UTRC-australica_Contig_1033 3200..3476 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1682586770.7520556-CDS-C-australica_Contig_1033:523..5941682586770.7520556-CDS-C-australica_Contig_1033:523..594Chrysoparadoxa australica CS_1217CDSC-australica_Contig_1033 524..594 +
1682586770.759914-CDS-C-australica_Contig_1033:678..7711682586770.759914-CDS-C-australica_Contig_1033:678..771Chrysoparadoxa australica CS_1217CDSC-australica_Contig_1033 679..771 +
1682586770.7697628-CDS-C-australica_Contig_1033:886..9531682586770.7697628-CDS-C-australica_Contig_1033:886..953Chrysoparadoxa australica CS_1217CDSC-australica_Contig_1033 887..953 +
1682586770.7792528-CDS-C-australica_Contig_1033:1085..11991682586770.7792528-CDS-C-australica_Contig_1033:1085..1199Chrysoparadoxa australica CS_1217CDSC-australica_Contig_1033 1086..1199 +
1682586770.7885246-CDS-C-australica_Contig_1033:1317..14081682586770.7885246-CDS-C-australica_Contig_1033:1317..1408Chrysoparadoxa australica CS_1217CDSC-australica_Contig_1033 1318..1408 +
1682586770.800049-CDS-C-australica_Contig_1033:1563..16241682586770.800049-CDS-C-australica_Contig_1033:1563..1624Chrysoparadoxa australica CS_1217CDSC-australica_Contig_1033 1564..1624 +
1682586770.8087049-CDS-C-australica_Contig_1033:1707..17771682586770.8087049-CDS-C-australica_Contig_1033:1707..1777Chrysoparadoxa australica CS_1217CDSC-australica_Contig_1033 1708..1777 +
1682586770.81684-CDS-C-australica_Contig_1033:1866..19601682586770.81684-CDS-C-australica_Contig_1033:1866..1960Chrysoparadoxa australica CS_1217CDSC-australica_Contig_1033 1867..1960 +
1682586770.832074-CDS-C-australica_Contig_1033:2028..21411682586770.832074-CDS-C-australica_Contig_1033:2028..2141Chrysoparadoxa australica CS_1217CDSC-australica_Contig_1033 2029..2141 +
1682586770.8409479-CDS-C-australica_Contig_1033:2423..25221682586770.8409479-CDS-C-australica_Contig_1033:2423..2522Chrysoparadoxa australica CS_1217CDSC-australica_Contig_1033 2424..2522 +
1682586770.8587196-CDS-C-australica_Contig_1033:2717..27611682586770.8587196-CDS-C-australica_Contig_1033:2717..2761Chrysoparadoxa australica CS_1217CDSC-australica_Contig_1033 2718..2761 +
1682586770.8711517-CDS-C-australica_Contig_1033:2966..30591682586770.8711517-CDS-C-australica_Contig_1033:2966..3059Chrysoparadoxa australica CS_1217CDSC-australica_Contig_1033 2967..3059 +
1682586770.883064-CDS-C-australica_Contig_1033:3126..31991682586770.883064-CDS-C-australica_Contig_1033:3126..3199Chrysoparadoxa australica CS_1217CDSC-australica_Contig_1033 3127..3199 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_C-australica_Contig_1033.1.10prot_C-australica_Contig_1033.1.10Chrysoparadoxa australica CS_1217polypeptideC-australica_Contig_1033 524..3199 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_C-australica_Contig_1033.1.10

>prot_C-australica_Contig_1033.1.10 ID=prot_C-australica_Contig_1033.1.10|Name=mRNA_C-australica_Contig_1033.1.10|organism=Chrysoparadoxa australica CS_1217|type=polypeptide|length=361bp
MAALGSVRCRAFSIGVARSVRGGRFHTTETEPVHGGVTPPPPTKTVKTTV
MDVLRVARESNRKLTMATAYSYPSALHVCRAGMDMLLVGDSVGMVELGYD
TTQPVTVEEMLHHCKAVARGAKTPLLIGDLPFGSYEASPEQAHRTAIRFV
KEGSMDAVKLEGGASRVEHIRRIVDGGIAVVGHVGLTPQSISVLGGFRAQ
GRTAVKARQLVDDALAVQDAGAFAVVVECVPSTVAKAITDAVEIPTIGIG
AGGSTSGQVLVYHDMLGMLQHPHHAQFVPKFCKRFANVGEQVNAGLLAYR
AEVESGVYPGSAYSPYTMSSKEEHSLAELLAKDELERQEKLALARKKLHD
QDEYEVTKLY*
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mRNA from alignment at C-australica_Contig_1033:279..3476+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_C-australica_Contig_1033.1.10 ID=mRNA_C-australica_Contig_1033.1.10|Name=mRNA_C-australica_Contig_1033.1.10|organism=Chrysoparadoxa australica CS_1217|type=mRNA|length=3198bp|location=Sequence derived from alignment at C-australica_Contig_1033:279..3476+ (Chrysoparadoxa australica CS_1217)
TGGGCTCAGAAATGTCTCGTTAAGTCACTACCCTTTTGGTGGGCATTGGG AGAGAGTTGAGAGCTGCAAAAGAGGGAAACTCAGAACAGGCGTCTCTCAC TCGTATTCTGCTCCTGCAATCTTCACTTCTGCCTTTTAGACGCCCCCACT TCGCAATTTGACCATATTATTTGCTTCTTGGGCACTGTTGTGGGCTCTCC CCACCTCCCTGGCTTGCCTGAGCGGAGTAAACGCGCTAGACGAGGATGGC AGCCTTAGGGTCAGTGCGATGCAGGGCGTTTAGCATAGGGGTCGCCCGCA GCGTTCGCGGGGGGAGGTGATGCTCTACCCTCCTCCTTCCATCTCTTGAT GCGCCCTCCCTCACCATACCACCCTGCCAATCCAATGTCCCTCCACCCAG GTTCCACACGACTGAGACTGAGCCAGTGCATGGAGGGGTAACCCCTCCAC CCCCAACGAAGACTGTGAAGACGACAGTGATGGATGTGCTTAGGTAACTC CTGCCATTTAAAGCACCTTCCCACATAGCCACCCACACTAACCCCACGTG CATGGTCAGCTGTTGCAAGTGCTCAGCTGACTCTCTCCCGCCTCCTGCCC TCCTCCAGGGTTGCAAGGGAAAGTAACAGGAAGCTGACCATGGCCACAGC CTATAGCTACCCGTCAGCACTCCACGTATGCACACGTCCCCAGCAGCAGC CACACCAACAAGTCCACTAACCCCTTCCCGTGGCTTGACCACCTTCAAGC TATGATGTGTCAACACAAAGCTGAAGTCCATCATTCATACTCCCCCTCAT CCCTCAGGTGTGCCGAGCTGGGATGGACATGCTTCTGGTGGGAGACAGCG TGGGCATGGTGGAGCTCGGCTATGACACCACACAACCAGTAACTGTGGAG GAGATGCTGCATCACTGTAAGGTACGAGCAGTGCAGGTTTGGTGTCTCAG GACTGGCAAGTTTTAAGCCTCTGGCTCTCCCTTCTCTCTCTTAATCACCT CGCCTCTGAGCCAGCCTCACGATCACTCGTTCTCTGCAGGCTGTTGCACG TGGCGCTAAGACTCCACTGTTGATTGGTGACCTTCCCTTTGGCAGCTATG AAGCATCTCCTGAGCAAGCCCATCGGACAGGTAATAAATTGCCCAATACC AATGCGCTTTCAAGTGCTATCTTTTATTATTCAGTTTATCCTGTCCTCTT GCGGCTTGTCACCTCTGTGGTGCGTTTCTTTTCACCCTCTGCGCACCTCT TTATAACCCATTTGGCTGCATGCATGGCATCTCAGCCATAAGGTTTGTGA AGGAAGGCTCGATGGATGCTGTCAAGCTTGAGGGAGGGGCAAGCAGGTAT GCTTCTGCTTGGCACTGCACGCTTCACAACCCTGACACCTCACGCCTTAC GTACCTCCTCTTCCCTTCCATCTCTAAAGGGTAGAGCACATTCGGCGGAT AGTAGATGGTGGGATAGCTGTTGTGGGCCACGTGGGGCTAACTCCCCAGG TGAGAAATGACACCAAGTCACTTTAACTGATAACACCTCAACAGAAGAGT AGGAGCTCCTCTAACCTCAAGCTCCTACACGTCACCAGTCCATCAGCGTG CTGGGTGGCTTTCGAGCACAGGGAAGGACTGCTGTGAAGGCCAGGCAGCT GGTGGATGATGCACTTGCAGTACAGGATGCAGGTGCTCTGACTGCTCACA ACTTGACCAGCAAGGCTGCTTATGGCTGTTTTAATCACGAAAGATCACAG GTGCCTTCGCTGTTGTGGTGGAGTGTGTGCCATCTACTGTGGCCAAAGCC ATAACGGACGCTGTGGAGATACCAACCATAGGAATAGGCGCGGGGGGGAG CACTTCAGGGCAGGTACTTGGGTACCCTCCATCCCAGTAGGTATCCAGTA GTAGTGATGGAACCTTTCCAGAAGGTTCCAGAAGGGGCCGTTGGTAACGA TGTTTTATGGAGTCTTGACCTGCACCTGACTTATGCAATAGTGGATGTAT ACCTGGCTGGTAGTCGGGAACATCATGTGACGCATGTATCATCATACTTT ATTTTTCCCTTCCTGCCATTGCTATCATTGCCGTCATTACCAATTGCCGT CGACCCAGCTGGTAAACCCCTCTCAACCCAACTCTCCTCATGCAGGTTCT TGTGTACCACGACATGCTCGGGATGCTGCAGCACCCTCATCACGCTCAGT TTGTCCCAAAGTTTTGCAAGCGATTCGCAAACGTGGGGGAGCAGGTACTA GAGCAGCCCCACCGCTTTCCCTTCTCTCACGAATGTCTCATGTGCTACTT CGTTTCACACCTCCCTAGCCTGATACCAGGACAACATGCAATGCACTCTA GTGGCACACTCTGTGCTCACTTGGAACGCCTTTTCCTGCCACCAGCCCTC CCATTCTAACCACAACTCCAAACACCATGCACTGACTAGGTCAACGCTGG TCTCCTTGCTTATCGCGCAGAAGTGGAGAGCGGGTAAGTCTTTTTCAGCC TGATGGCACATTAGAGCATTGGACCAGCTCCTTGATATGCTGCATGACAG TGCCCTCCCACATGAAAACACATTAGCAAGCCCCTCTCTAGTGTGTACTT ATCTACAACTAAGGCCTTTAGGAGAGAGAGTAGCCAGCTGTACTGTTCAG TTCAGGGGCAGTAACCGCTGTGCCCGCTCCCCCACCAGGGTCTATCCTGG GTCAGCGTACTCTCCATACACTATGTCCTCCAAGGAAGAGCACAGCTTAG CAGAGTTGCTCGCTAAGGATGAGCTGGAGAGGTGAGTTTGACTTGCCCCA ACATGCTTGTTCCACATGCATTTTAATTGTGGCTTGCATGATCCACAGGC AGGAGAAGCTTGCTCTGGCTAGGAAGAAATTGCATGACCAAGATGAATAT GAAGTGACCAAACTCTACTGAGGATGATGACTGGCAACTCATAAATAGAT GTCTGTTCAGCGGAATTGTGGACATGATGGCATGGGCAGGAACACTAACA TTGGTGCTAATTTTCTGCTGGAAGGCTTCCCGCTGGCGCTGTGGTGGTGA TACTGCCCATGCCAACAACTCCTCTGAGTCCCTTTGCTGAATGATGAACA TTACTCGAGACATGCCACAGAATCGCTCCAAGGATTCTTAACTGCCAGGA AGGCCAATCTACGCTGAGTGGGATGGATATCTGTGTGTTAGTGGACTG
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Coding sequence (CDS) from alignment at C-australica_Contig_1033:279..3476+

>mRNA_C-australica_Contig_1033.1.10 ID=mRNA_C-australica_Contig_1033.1.10|Name=mRNA_C-australica_Contig_1033.1.10|organism=Chrysoparadoxa australica CS_1217|type=CDS|length=1083bp|location=Sequence derived from alignment at C-australica_Contig_1033:279..3476+ (Chrysoparadoxa australica CS_1217)
ATGGCAGCCTTAGGGTCAGTGCGATGCAGGGCGTTTAGCATAGGGGTCGC
CCGCAGCGTTCGCGGGGGGAGGTTCCACACGACTGAGACTGAGCCAGTGC
ATGGAGGGGTAACCCCTCCACCCCCAACGAAGACTGTGAAGACGACAGTG
ATGGATGTGCTTAGGGTTGCAAGGGAAAGTAACAGGAAGCTGACCATGGC
CACAGCCTATAGCTACCCGTCAGCACTCCACGTGTGCCGAGCTGGGATGG
ACATGCTTCTGGTGGGAGACAGCGTGGGCATGGTGGAGCTCGGCTATGAC
ACCACACAACCAGTAACTGTGGAGGAGATGCTGCATCACTGTAAGGCTGT
TGCACGTGGCGCTAAGACTCCACTGTTGATTGGTGACCTTCCCTTTGGCA
GCTATGAAGCATCTCCTGAGCAAGCCCATCGGACAGCCATAAGGTTTGTG
AAGGAAGGCTCGATGGATGCTGTCAAGCTTGAGGGAGGGGCAAGCAGGGT
AGAGCACATTCGGCGGATAGTAGATGGTGGGATAGCTGTTGTGGGCCACG
TGGGGCTAACTCCCCAGTCCATCAGCGTGCTGGGTGGCTTTCGAGCACAG
GGAAGGACTGCTGTGAAGGCCAGGCAGCTGGTGGATGATGCACTTGCAGT
ACAGGATGCAGGTGCCTTCGCTGTTGTGGTGGAGTGTGTGCCATCTACTG
TGGCCAAAGCCATAACGGACGCTGTGGAGATACCAACCATAGGAATAGGC
GCGGGGGGGAGCACTTCAGGGCAGGTTCTTGTGTACCACGACATGCTCGG
GATGCTGCAGCACCCTCATCACGCTCAGTTTGTCCCAAAGTTTTGCAAGC
GATTCGCAAACGTGGGGGAGCAGGTCAACGCTGGTCTCCTTGCTTATCGC
GCAGAAGTGGAGAGCGGGGTCTATCCTGGGTCAGCGTACTCTCCATACAC
TATGTCCTCCAAGGAAGAGCACAGCTTAGCAGAGTTGCTCGCTAAGGATG
AGCTGGAGAGGCAGGAGAAGCTTGCTCTGGCTAGGAAGAAATTGCATGAC
CAAGATGAATATGAAGTGACCAAACTCTACTGA
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