mRNA_C-australica_Contig_1033.1.10 (mRNA) Chrysoparadoxa australica CS_1217
You are viewing an mRNA, more information available on the corresponding polypeptide page
Overview
Homology
BLAST of mRNA_C-australica_Contig_1033.1.10 vs. uniprot
Match: D8LCZ8_ECTSI (3-methyl-2-oxobutanoate hydroxymethyltransferase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LCZ8_ECTSI) HSP 1 Score: 460 bits (1184), Expect = 3.260e-157 Identity = 229/306 (74.84%), Postives = 266/306 (86.93%), Query Frame = 3 Query: 396 MDVLRVARESNRKLTMATAYSYPSALHVCRAGMDMLLVGDSVGMVELGYDTTQPVTVEEMLHHCKAVARGAKTPLLIGDLPFGSYEASPEQAHRTAIRFVKEGSMDAVKLEGGASRVEHIRRIVDGGIAVVGHVGLTPQSISVLGGFRAQGRTAVKARQLVDDALAVQDAGAFAVVVECVPSTVAKAITDAVEIPTIGIGAGGSTSGQVLVYHDMLGMLQHPHHAQFVPKFCKRFANVGEQVNAGLLAYRAEVESGVYPGSAYSPYTMSSKEEHSLAELLAKDELERQEKLALARKKLHDQDEYEV 1313 MDV+++ R RK+TM TAY YPSA+HVCRAG+D+LLVGDSVGMVELGYDTTQPVTV +MLHHCKAV RGA+TPL++ D+PFGSYE SP++A RTAIRFVKEG++DAVKLEGG +R EHIR++VDGGIAV+GHVGLTPQ+ISVLGGFRAQGRTAVKARQ+VDDALAVQ+AGAFAVVVECVPS VAKA+T+A+EIPTIGIGAG TSGQVLVYHDMLGMLQHPHHAQFVP+FCK +A+VGE+V GL +R EVE GV+P +SPY M + EE LLAKDE ER E+LAL +K L +QDEYE Sbjct: 1 MDVVKIRRRGERKVTMVTAYDYPSAVHVCRAGIDILLVGDSVGMVELGYDTTQPVTVGDMLHHCKAVGRGARTPLVVADMPFGSYEVSPKEALRTAIRFVKEGNVDAVKLEGGKNRAEHIRKVVDGGIAVMGHVGLTPQAISVLGGFRAQGRTAVKARQVVDDALAVQEAGAFAVVVECVPSPVAKAVTEALEIPTIGIGAGPCTSGQVLVYHDMLGMLQHPHHAQFVPRFCKNYASVGEEVRRGLENFRREVEGGVFPQEEHSPYKMPAGEEQQFKRLLAKDEHERLERLALKKKALEEQDEYET 306
BLAST of mRNA_C-australica_Contig_1033.1.10 vs. uniprot
Match: A0A835Z145_9STRA (3-methyl-2-oxobutanoate hydroxymethyltransferase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z145_9STRA) HSP 1 Score: 402 bits (1034), Expect = 6.830e-135 Identity = 203/310 (65.48%), Postives = 243/310 (78.39%), Query Frame = 3 Query: 396 MDVLRVARESNRKLTMATAYSYPSALHVCRAGMDMLLVGDSVGMVELGYDTTQPVTVEEMLHHCKAVARGAKTPLLIGDLPFGSYEASPEQAHRTAIRFVKEGSMDAVKLEGGASRVEHIRRIVDGGIAVVGHVGLTPQSISVLGGFRAQGRTAVKARQLVDDALAVQDAGAFAVVVECVPSTVAKAITDAVEIPTIGIGAGGSTSGQVLVYHDMLGMLQHPHHAQFVPKFCKRFANVGEQVNAGLLAYRAEVESGVYPGSAYSPYTMSSKEEHSLAELLAKDELERQEKLALARKKLHDQDEYEVTKLY 1325 M VL++ARE RK+TM TAY YPS++HVC AG+D+ LVGDSVGMV LGY+TTQPVTVEEMLHHC+AV RGA PLL+GD+PFGSYE SPEQA +TA RFVKEG +DAVKLEGG +R EHI+RIV+GG+AV+GHVGLTPQ+ISVLGGFRAQGR+ + Q+AGAFAVV+ECVP+ V +AI DA+EIP IGIGAG T GQVLVYHDMLG+L HPHH + PKFCK FA+V +V GL AYR EVE+G +PG+A+SPY M+ EE + LLA D ER+E L +KKL +QDE E +LY Sbjct: 1 MTVLKLAREKKRKITMVTAYDYPSSVHVCEAGIDIALVGDSVGMVTLGYETTQPVTVEEMLHHCRAVKRGAAGPLLVGDMPFGSYEVSPEQALQTAYRFVKEGGVDAVKLEGGRTRTEHIKRIVEGGVAVMGHVGLTPQAISVLGGFRAQGRSVI------------QEAGAFAVVLECVPAVVGRAIADALEIPVIGIGAGPHTDGQVLVYHDMLGILSHPHHQRMAPKFCKVFADVQTEVMKGLHAYRREVEAGAFPGAAHSPYAMTPAEEANFEHLLAHDARERREAAELTKKKLKEQDELEAVRLY 298
BLAST of mRNA_C-australica_Contig_1033.1.10 vs. uniprot
Match: A0A7S2FBI3_9STRA (3-methyl-2-oxobutanoate hydroxymethyltransferase n=2 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2FBI3_9STRA) HSP 1 Score: 383 bits (984), Expect = 2.210e-127 Identity = 192/307 (62.54%), Postives = 240/307 (78.18%), Query Frame = 3 Query: 405 LRVARESNRKLTMATAYSYPSALHVCRAGMDMLLVGDSVGMVELGYDTTQPVTVEEMLHHCKAVARGAKTPLLIGDLPFGSYEASPEQAHRTAIRFVKEGSMDAVKLEGGASRVEHIRRIVDGGIAVVGHVGLTPQSISVLGGFRAQGRTAVKARQLVDDALAVQDAGAFAVVVECVPSTVAKAITDAVEIPTIGIGAGGSTSGQVLVYHDMLGMLQHPHHAQFVPKFCKRFANVGEQVNAGLLAYRAEVESGVYPGSAYSPYTMSSKEEHSLAELLAKDELERQEKLALARKKLHDQDEYEVTKLY 1325 L + ++++M TAY+YPSA+ V A +D++LVGDSVGMVELGY+TTQPVT+E+MLHH KAV RG + L++ DLPFGSYE SP QA ++A R VKEG DAVKLEGG R + R IV GGIAV+GH+GLTPQ+ISV+GGFRAQGRT VKAR L+DDALA+QDAG FA+V+ECVP VA+ IT+++EIPTIGIGAG T+GQVLVYHDMLGML HPHH QFVPKFCK++A VG + GL A++++V+ G++P ++PY MS KEE EL+A+DE RQ KL A K+L D DEYE T +Y Sbjct: 2 LLAMKRRGKRISMVTAYNYPSAVQVDLANIDVVLVGDSVGMVELGYETTQPVTLEDMLHHAKAVKRGVERSLIVVDLPFGSYEISPAQALQSAYRCVKEGGADAVKLEGGRDRADTCRSIVKGGIAVMGHIGLTPQAISVIGGFRAQGRTGVKARALLDDALALQDAGVFALVLECVPPQVAQVITESLEIPTIGIGAGPHTTGQVLVYHDMLGMLSHPHHEQFVPKFCKKYAEVGHAIRFGLDAFKSDVDQGLFPADEFTPYKMSDKEEIKFRELVAEDEGVRQSKLTRASKRLKDADEYEATHIY 308
BLAST of mRNA_C-australica_Contig_1033.1.10 vs. uniprot
Match: W7TQW2_9STRA (3-methyl-2-oxobutanoate hydroxymethyltransferase n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TQW2_9STRA) HSP 1 Score: 384 bits (986), Expect = 9.590e-127 Identity = 196/314 (62.42%), Postives = 242/314 (77.07%), Query Frame = 3 Query: 384 KTTVMDVLRVARESNRKLTMATAYSYPSALHVCRAGMDMLLVGDSVGMVELGYDTTQPVTVEEMLHHCKAVARGAKTPLLIGDLPFGSYEASPEQAHRTAIRFVKEGSMDAVKLEGGASRVEHIRRIVDGGIAVVGHVGLTPQSISVLGGFRAQGRTAVKARQLVDDALAVQDAGAFAVVVECVPSTVAKAITDAVEIPTIGIGAGGSTSGQVLVYHDMLGMLQHPHHAQFVPKFCKRFANVGEQVNAGLLAYRAEVESGVYPGSAYSPYTMSSKEEHSLAELLAKDELERQEKLALARKKLHDQDEYEVTKLY 1325 K +V+D+L R+ N++++M TAY YPSALHV AG+D++L GDSV MVELGYDTTQPV +E+MLHHCKAVARG K L++GD+PFGSYE S E A A RF+KEG DAVK+EGG R + +IV GIAV+GHVGLTPQ+ISVLGGFRAQGRTAVKAR LVDDALA+Q+AGAFAVVVECVP+ VA+AIT+A+EIPTIGIGAG T GQVLV+HDMLGM HPHH FVP+FCKR+A +G + GL +++ +VE+G +P AYSPY M + E + L+A+D RQ + A ++L DEYE KLY Sbjct: 61 KMSVLDLLHKKRK-NQRISMVTAYDYPSALHVDLAGIDIVLCGDSVAMVELGYDTTQPVDMEQMLHHCKAVARGTKRSLIVGDMPFGSYEVSEELAMTNAFRFIKEGFTDAVKIEGGRDRAHIVEKIVKNGIAVMGHVGLTPQAISVLGGFRAQGRTAVKARGLVDDALALQEAGAFAVVVECVPAPVAQAITEALEIPTIGIGAGPHTCGQVLVFHDMLGMTTHPHHEAFVPRFCKRYAQLGNVIREGLESFKQDVEAGTFPSEAYSPYKMPAAELRAFQALMAQDATSRQTQAHRAAERLKQSDEYEQIKLY 373
BLAST of mRNA_C-australica_Contig_1033.1.10 vs. uniprot
Match: A0A4D9CXI1_9STRA (3-methyl-2-oxobutanoate hydroxymethyltransferase n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CXI1_9STRA) HSP 1 Score: 377 bits (968), Expect = 3.420e-125 Identity = 191/295 (64.75%), Postives = 228/295 (77.29%), Query Frame = 3 Query: 441 MATAYSYPSALHVCRAGMDMLLVGDSVGMVELGYDTTQPVTVEEMLHHCKAVARGAKTPLLIGDLPFGSYEASPEQAHRTAIRFVKEGSMDAVKLEGGASRVEHIRRIVDGGIAVVGHVGLTPQSISVLGGFRAQGRTAVKARQLVDDALAVQDAGAFAVVVECVPSTVAKAITDAVEIPTIGIGAGGSTSGQVLVYHDMLGMLQHPHHAQFVPKFCKRFANVGEQVNAGLLAYRAEVESGVYPGSAYSPYTMSSKEEHSLAELLAKDELERQEKLALARKKLHDQDEYEVTKLY 1325 M TAY YPSALHV AG+D++L GDSV MVELGYDTTQPV +E+MLHHCKAVARG K L++GD+PFGSYE S E A A RF+KEG DAVK+EGG R + +IV GIAV+GHVGLTPQ+ISVLGGFRAQGRTAVKAR LVDDALA+Q+AGAFAVVVECVP+ VA+AIT+A+EIPTIGIGAG T GQVLVYHDMLGM HPHH FVP+FCKR+A +G + GL +++ +VE+G +P AYSPY M + E + L+A+D RQ + A ++L DEYE KLY Sbjct: 1 MVTAYDYPSALHVDLAGIDIVLCGDSVAMVELGYDTTQPVDMEQMLHHCKAVARGTKRSLIVGDMPFGSYEVSEELAMTNAFRFIKEGFTDAVKIEGGRDRAHIVEKIVKNGIAVMGHVGLTPQAISVLGGFRAQGRTAVKARGLVDDALALQEAGAFAVVVECVPAPVAQAITEALEIPTIGIGAGPHTCGQVLVYHDMLGMTTHPHHEAFVPRFCKRYAQLGNVIREGLESFKQDVEAGTFPSEAYSPYKMPAAELRAFQALMAQDATSRQTQAHRAAERLKQSDEYEQIKLY 295
BLAST of mRNA_C-australica_Contig_1033.1.10 vs. uniprot
Match: A0A7S3QJH1_9STRA (3-methyl-2-oxobutanoate hydroxymethyltransferase n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3QJH1_9STRA) HSP 1 Score: 380 bits (976), Expect = 5.450e-124 Identity = 189/321 (58.88%), Postives = 244/321 (76.01%), Query Frame = 3 Query: 417 RESNRKLTMATAYSYPSALHVCRAGMDMLLVGDSVGMVELGYDTTQPVTVEEMLHHCKAVARG--------------AKTPLLIGDLPFGSYEASP-EQAHRTAIRFVKEGSMDAVKLEGGAS-RVEHIRRIVDGGIAVVGHVGLTPQSISVLGGFRAQGRTAVKARQLVDDALAVQDAGAFAVVVECVPSTVAKAITDAVEIPTIGIGAGGSTSGQVLVYHDMLGMLQHPHHAQFVPKFCKRFANVGEQVNAGLLAYRAEVESGVYPGSAYSPYTMSSKEEHSLAELLAKDELERQEKLALARKKLHDQDEYEVTKLY*G 1331 + +K+TM TAY +PSA+HV RA +DM+LVGDS MVELGYDTTQP+T+++MLHHC+AV RG AKTPLL+GD+PFGSYE + + A + A RFVKEG MDA+KLEGG+ R + I+ +V+GG+AV+GH+GLTPQ+ISV+GGFRAQGRTA +AR+++D+AL +QDAGAF+VV+ECVPS VAKA+T+ +EIPTIGIGAGG TSGQVLVYHDMLGM+ HPHH +F+PKFCK +A VG + GL A++ EVE G +PG YSPY M+ E+ + LL +D +ER+ K A +K+ DEYE LY G Sbjct: 137 KRRGKKITMVTAYDFPSAMHVQRANIDMILVGDSAAMVELGYDTTQPITLDQMLHHCQAVKRGVEASINGIKSKMEKAKTPLLVGDMPFGSYEYNDLDIALKNAYRFVKEGGMDAIKLEGGSKHRAKTIKHVVEGGVAVMGHIGLTPQAISVIGGFRAQGRTAARAREMIDEALRLQDAGAFSVVLECVPSNVAKAVTETLEIPTIGIGAGGGTSGQVLVYHDMLGMMSHPHHQEFMPKFCKSYAQVGHAITEGLDAFKKEVEDGTFPGEEYSPYLMNDDEKRAFEVLLEQDSIERERKHEEATRKMKQADEYEQLSLYGG 457
BLAST of mRNA_C-australica_Contig_1033.1.10 vs. uniprot
Match: A0A7S2XAE6_9EUKA (3-methyl-2-oxobutanoate hydroxymethyltransferase (Fragment) n=2 Tax=Lotharella TaxID=74819 RepID=A0A7S2XAE6_9EUKA) HSP 1 Score: 375 bits (962), Expect = 3.260e-123 Identity = 188/317 (59.31%), Postives = 238/317 (75.08%), Query Frame = 3 Query: 384 KTTVMDVLRVARESNRKLTMATAYSYPSALHVCRAGMDMLLVGDSVGMVELGYDTTQPVTVEEMLHHCKAVARGAKTPLLIGDLPFGSYEASPEQAHRTAIRFVKEGSMDAVKLEGGASRVEHIRRIVDGGIAVVGHVGLTPQSISVLGGFRAQGRTAVKARQLVDDALAVQDAGAFAVVVECVPSTVAKAITDAVEIPTIGIGAGGSTSGQVLVYHDMLGMLQHPHHAQFVPKFCKRFANVGEQVNAGLLAYRAEVESGVYPG-SAYSPYTMSSKEEHSLAELLAKDELERQEKLALARKKLHDQDEYEVTKLY*G 1331 K + M+++ R R +TM TAY YPSALH AG+D++LVGDS GMVELGYDTTQPVT++EMLHH KAV RGAK PL++GDLPFG+YE SPEQA RTA RFVKE +D VK+EGG ++V+GG+AV+GH+GLTPQ ISVLGGFRAQGRTA+KAR+LVDDALA++DAG FA+V+ECVP V +AIT+A+EIPTIGIG+G T+GQVLVYHDMLGM HPH+ F PKFCK+F ++GE + GL ++ EVESG +P +SPY MS+KE+ E++ K + +K+ + DEY+V LY G Sbjct: 51 KMSAMELIAKRRRGER-ITMVTAYDYPSALHCDLAGIDVVLVGDSCGMVELGYDTTQPVTIDEMLHHAKAVVRGAKHPLIVGDLPFGTYEVSPEQAQRTAYRFVKEAGVDCVKMEGGRKMAPFASKVVNGGVAVMGHIGLTPQHISVLGGFRAQGRTAIKARELVDDALALEDAGCFAIVIECVPPQVGEAITEALEIPTIGIGSGPGTTGQVLVYHDMLGMTVHPHYKAFTPKFCKKFVDLGETIRQGLEGFKREVESGSFPSLQDHSPYKMSNKEQAMFEEMMKXXXXXXXXKHVINAEKMKNSDEYDVLNLYGG 366
BLAST of mRNA_C-australica_Contig_1033.1.10 vs. uniprot
Match: A0A7S2UK27_9STRA (3-methyl-2-oxobutanoate hydroxymethyltransferase n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2UK27_9STRA) HSP 1 Score: 367 bits (941), Expect = 5.020e-121 Identity = 189/297 (63.64%), Postives = 229/297 (77.10%), Query Frame = 3 Query: 441 MATAYSYPSALHVCRAGMDMLLVGDSVGMVELGYDTTQPVTVEEMLHHCKAVARGAKTPLLIGDLPFGSYEASPEQ-AHRTAIRFVKEGSMDAVKLEGGA-SRVEHIRRIVDGGIAVVGHVGLTPQSISVLGGFRAQGRTAVKARQLVDDALAVQDAGAFAVVVECVPSTVAKAITDAVEIPTIGIGAGGSTSGQVLVYHDMLGMLQHPHHAQFVPKFCKRFANVGEQVNAGLLAYRAEVESGVYPGSAYSPYTMSSKEEHSLAELLAKDELERQEKLALARKKLHDQDEYEVTKLY 1325 M TAY YPSALHV RAGMD+LLVGDS MVELGYDTTQP+T+++MLHHC+AV RGA LL+ D+PFG+YE S A R A R +KE MDAVKLEGG+ +R +R +V+GG+AV+GHVGLTPQ+ISV+GGFRAQGRTA +AR L+D+AL ++DAGAFAVV+ECVP VA+AIT ++EIPTIGIGAG TSGQVLVYHDMLGML HPHH QF+PKFCKR+A VG + GL ++A+VESG +PG+ YSPY M+ E+ +LLA D ER+ KKL DEYE LY Sbjct: 1 MVTAYDYPSALHVDRAGMDVLLVGDSCAMVELGYDTTQPMTLDQMLHHCQAVKRGASRSLLVADMPFGTYEYSDTDIALRNAYRLIKEAGMDAVKLEGGSKARATTVRTLVEGGVAVMGHVGLTPQAISVIGGFRAQGRTATRARALLDEALRLEDAGAFAVVLECVPGNVAEAITKSLEIPTIGIGAGAGTSGQVLVYHDMLGMLSHPHHEQFMPKFCKRYAQVGHAIKDGLEEFKADVESGEFPGNEYSPYKMNESEKELFDDLLASDADERKLHHEDNAKKLKQADEYEQLSLY 297
BLAST of mRNA_C-australica_Contig_1033.1.10 vs. uniprot
Match: A0A448ZNZ8_9STRA (3-methyl-2-oxobutanoate hydroxymethyltransferase n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448ZNZ8_9STRA) HSP 1 Score: 365 bits (938), Expect = 1.760e-119 Identity = 189/313 (60.38%), Postives = 237/313 (75.72%), Query Frame = 3 Query: 405 LRVARESNRKLTMATAYSYPSALHVCRAGMDMLLVGDSVGMVELGYDTTQPVTVEEMLHHCKAVARGAKTP----LLIGDLPFGSYE-ASPEQAHRTAIRFVKEGSMDAVKLEGGA-SRVEHIRRIVDGGIAVVGHVGLTPQSISVLGGFRAQGRTAVKARQLVDDALAVQDAGAFAVVVECVPSTVAKAITDAVEIPTIGIGAGGSTSGQVLVYHDMLGMLQHPHHAQFVPKFCKRFANVGEQVNAGLLAYRAEVESGVYPGSAYSPYTMSSKEEHSLAELLAKDELERQEKLALARKKLHDQDEYEVTKLY 1325 L + +K+TM TAY +PSA HV RAG+DM+LVGDSV MVELG++TTQ V+++ M+HHC++V RG + +L+GD+PFG+YE + A R A RFVKE DAVKLEGG+ R + ++IVDGG+AV+GHVGLTPQ+ISV+GGFRAQGRTAV+ARQL+DDAL +QDAG F+VV+ECVP+ VA AIT+ +EIPTIGIGAGG TSGQVLV+HDMLGML HPHH QFVPKFCK++A VG + GL ++AEVES +PG+ YSPY MS E+ + LL D ER+ K +A KL DEYE KLY Sbjct: 54 LNAKKRKGKKITMVTAYDFPSAAHVGRAGIDMVLVGDSVAMVELGHETTQNVSIDSMIHHCQSVKRGLELADSGSMLVGDMPFGTYEYEDTDVALRNAYRFVKEAGCDAVKLEGGSIHRAKTAQKIVDGGVAVMGHVGLTPQAISVIGGFRAQGRTAVRARQLLDDALRLQDAGCFSVVLECVPANVAAAITETLEIPTIGIGAGGDTSGQVLVFHDMLGMLSHPHHQQFVPKFCKKYAQVGHAIQDGLSRFKAEVESETFPGTEYSPYLMSDGEKEAFDALLESDAEERRIKHDVAATKLSQADEYETLKLY 366
BLAST of mRNA_C-australica_Contig_1033.1.10 vs. uniprot
Match: A0A7S2N560_9STRA (3-methyl-2-oxobutanoate hydroxymethyltransferase (Fragment) n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2N560_9STRA) HSP 1 Score: 367 bits (942), Expect = 4.510e-119 Identity = 189/312 (60.58%), Postives = 239/312 (76.60%), Query Frame = 3 Query: 384 KTTVMDVLRVARESNRKLTMATAYSYPSALHVCRAGMDMLLVGDSVGMVELGYDTTQPVTVEEMLHHCKAVARGAKT-PLLIGDLPFGSYE-ASPEQAHRTAIRFVKEGSMDAVKLEGG-ASRVEHIRRIVDGGIAVVGHVGLTPQSISVLGGFRAQGRTAVKARQLVDDALAVQDAGAFAVVVECVPSTVAKAITDAVEIPTIGIGAGGSTSGQVLVYHDMLGMLQHPHHAQFVPKFCKRFANVGEQVNAGLLAYRAEVESGVYPGSAYSPYTMSSKEEHSLAELLAKDELERQEKLALARKKLHDQDEYE 1310 K T + + R N K+TM TAY YPSA+HV RAG+D++LVGDS MVELG++TTQP+T++EM+HHCKAV RGA PLL+GD+P GSYE + A R A R +K+G MDAVKLEGG A+R +++V+GG+AV+GHVGLTPQ+ISV+GGFRAQGRTA +AR L+D+A+ +QDAGAFA+V+ECVP+ VAK ITD +EIPTIGIGAG TSGQVLV+HDMLGML HPHH +FVPKFCKR+A VG + GL +R +VE G +P YSPY M+ +E+ + LLAKDE +R+ K KKL + DEYE Sbjct: 133 KVTTLSLTSKKRHGN-KITMVTAYDYPSAVHVDRAGIDIVLVGDSCAMVELGFETTQPITLDEMIHHCKAVKRGAPNRPLLVGDMPLGSYEYEDSDVALRNAYRMLKDGGMDAVKLEGGSAARANTTKKLVEGGVAVMGHVGLTPQAISVIGGFRAQGRTATRARSLLDEAMRLQDAGAFAIVLECVPANVAKVITDTLEIPTIGIGAGAGTSGQVLVFHDMLGMLSHPHHEEFVPKFCKRYARVGHYITKGLEEFRHDVEQGDFPSEEYSPYVMTEEEKEAFDLLLAKDEEDRRTKHDETIKKLTEADEYE 443 The following BLAST results are available for this feature:
BLAST of mRNA_C-australica_Contig_1033.1.10 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-australica_Contig_1033.1.10 >prot_C-australica_Contig_1033.1.10 ID=prot_C-australica_Contig_1033.1.10|Name=mRNA_C-australica_Contig_1033.1.10|organism=Chrysoparadoxa australica CS_1217|type=polypeptide|length=361bp MAALGSVRCRAFSIGVARSVRGGRFHTTETEPVHGGVTPPPPTKTVKTTVback to top mRNA from alignment at C-australica_Contig_1033:279..3476+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-australica_Contig_1033.1.10 ID=mRNA_C-australica_Contig_1033.1.10|Name=mRNA_C-australica_Contig_1033.1.10|organism=Chrysoparadoxa australica CS_1217|type=mRNA|length=3198bp|location=Sequence derived from alignment at C-australica_Contig_1033:279..3476+ (Chrysoparadoxa australica CS_1217)back to top Coding sequence (CDS) from alignment at C-australica_Contig_1033:279..3476+ >mRNA_C-australica_Contig_1033.1.10 ID=mRNA_C-australica_Contig_1033.1.10|Name=mRNA_C-australica_Contig_1033.1.10|organism=Chrysoparadoxa australica CS_1217|type=CDS|length=1083bp|location=Sequence derived from alignment at C-australica_Contig_1033:279..3476+ (Chrysoparadoxa australica CS_1217)back to top |