mRNA_C-australica_Contig_1032.5.1 (mRNA) Chrysoparadoxa australica CS_1217

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_C-australica_Contig_1032.5.1
Unique NamemRNA_C-australica_Contig_1032.5.1
TypemRNA
OrganismChrysoparadoxa australica CS_1217 (Chrysoparadoxa australica CS_1217)
Homology
BLAST of mRNA_C-australica_Contig_1032.5.1 vs. uniprot
Match: A0A835YYS7_9STRA (Protein-synthesizing GTPase n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A835YYS7_9STRA)

HSP 1 Score: 762 bits (1968), Expect = 8.590e-269
Identity = 387/468 (82.69%), Postives = 426/468 (91.03%), Query Frame = 3
Query: 1035 KQSHLKVQDLSTLDPSKLTPLSPEVISRQATINIGTIGHVAHGKSTVVKSISGVQTVRFKNELERNITIKLGYANAKIFKAEVEAAEGADKDADAAHEKPGSYCSKGSAHADTFQERGKTWNLQRHVSFVDCPGHDILMATMLNGAAVMDAALLLVAGNEPCPQPQTSEHLAAVEIMRLQNIIILQNKVDLVKSDQAHAQYEQIKKFVAGTVADDAPIVPVSAVMSYNLDVVCEYICRNIPIPLRDFTSKPRLIVIRSFDVNKPGEEIMDICGGVAGGSIVQGVLRVGDEIEIRPGIVTKDADGNVKCESIFSRILSLYAEQNDLQYAVPGGLIGVGTKASSVDPTLTRADRLVGQVLGLKGYLPDVYTEVEISYYLLRRLLGVKTSEGSKQAKVQKLAKQEILMVNIGSTASGGKVLAIKQDLAKILLTQPVCTQEGEKIALSRRVDKHWRLIGWGQIRRGSKIAAS 2438
            +Q HL  QDLSTLDP+KLTPL+PEVISRQATINIGTIGHVAHGKSTVVK+ISGVQTVRFKNELERNITIKLGYANAK++ A+  A EG          + G+Y S+GSAHAD F+E GK W+LQRHVSFVDCPGHDILMATMLNGAAVMDAALLLVAGNEPCPQPQTSEHLAAVEIMRLQNIIILQNKVDLVK DQA  Q+EQIK+FVAGTVAD+API+P+SAVM YN+DVVCEYIC NIPIP+RDFTS PRLIVIRSFD+NKPGEE+  + GGVAGGSI+QG+LR+GDEIE+RPGIVTK++DG+VKCE I S+ILSLYAEQNDLQ+AVPGGLIGVGT+   +DPTLTRADRLVGQVLGL+G LPDV+TEVEIS+YLLRRLLGVKT EG KQAKVQKL KQEILMVNIGSTASGGKVLA+K DLAKILLTQPVCT+EGEKIALSRRVDKHWRLIGWGQIRRGSKIA +
Sbjct:   39 RQDHLAKQDLSTLDPAKLTPLTPEVISRQATINIGTIGHVAHGKSTVVKAISGVQTVRFKNELERNITIKLGYANAKVYNAQEGAREG----------ELGNYTSRGSAHADVFEENGKQWHLQRHVSFVDCPGHDILMATMLNGAAVMDAALLLVAGNEPCPQPQTSEHLAAVEIMRLQNIIILQNKVDLVKQDQALLQHEQIKRFVAGTVADNAPIIPISAVMRYNVDVVCEYICNNIPIPVRDFTSVPRLIVIRSFDINKPGEEVAGLRGGVAGGSILQGILRLGDEIEVRPGIVTKNSDGSVKCEPIMSKILSLYAEQNDLQFAVPGGLIGVGTR---IDPTLTRADRLVGQVLGLRGQLPDVFTEVEISFYLLRRLLGVKTQEGGKQAKVQKLQKQEILMVNIGSTASGGKVLAVKGDLAKILLTQPVCTEEGEKIALSRRVDKHWRLIGWGQIRRGSKIAVA 493          
BLAST of mRNA_C-australica_Contig_1032.5.1 vs. uniprot
Match: A0A6S9GDD6_HETAK (Protein-synthesizing GTPase n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6S9GDD6_HETAK)

HSP 1 Score: 726 bits (1875), Expect = 4.910e-255
Identity = 377/474 (79.54%), Postives = 417/474 (87.97%), Query Frame = 3
Query: 1017 GDGRQKKQSHLKVQDLSTLDPSKLTPLSPEVISRQATINIGTIGHVAHGKSTVVKSISGVQTVRFKNELERNITIKLGYANAKIFKAEVEAAEGADKDADAAHEKPGSYCSKGSAHADTFQERGKTWNLQRHVSFVDCPGHDILMATMLNGAAVMDAALLLVAGNEPCPQPQTSEHLAAVEIMRLQNIIILQNKVDLVKSDQAHAQYEQIKKFVAGTVADDAPIVPVSAVMSYNLDVVCEYICRNIPIPLRDFTSKPRLIVIRSFDVNKPGEEIMDICGGVAGGSIVQGVLRVGDEIEIRPGIVTKDADGNVKCESIFSRILSLYAEQNDLQYAVPGGLIGVGTKASSVDPTLTRADRLVGQVLGLKGYLPDVYTEVEISYYLLRRLLGVKTSEGSKQAKVQKLAKQEILMVNIGSTASGGKVLAIKQDLAKILLTQPVCTQEGEKIALSRRVDKHWRLIGWGQIRRGSKIAAS 2438
            GDG  K  SHL VQDL+TLD ++LTPL+PEVISRQATINIGTIGHVAHGKSTVVK+ISGVQTVRFKNELERNITIKLGYANAKI+KA             A  E  GSY S GS+  D F+E GKTW L RHVSFVDCPGHDILMATMLNGAAVMDAALLLVAGNEPCPQPQTSEHLAAVEIMRLQNIIILQNKVDLVK +QA AQ+EQIK+FVAGTVAD AP+VPVSAV+ YN+DVVCEY+ +++P+P+RDFTS PRLIVIRSFDVNKPGE +  + GGVAGGSI+QGVLRVGDEIE+RPGIV KDA+G VKC  IFS+++SLYAE NDLQYAVPGGLIGVGT+   +DPTLTRADRLVGQVLG +G LP V+TE+EIS+YLLRRLLGVKT EG KQAKVQKL+K EILMVNIGSTA+GGKVLA+K+DLAK+LLTQPVCTQEGEKIALSRRVDKHWRLIGWGQIRRGSK+  S
Sbjct:   20 GDG--KGSSHLAVQDLATLDVTQLTPLTPEVISRQATINIGTIGHVAHGKSTVVKAISGVQTVRFKNELERNITIKLGYANAKIYKA-------------AGEEGMGSYRSWGSSKPDRFEEGGKTWELVRHVSFVDCPGHDILMATMLNGAAVMDAALLLVAGNEPCPQPQTSEHLAAVEIMRLQNIIILQNKVDLVKQEQALAQHEQIKRFVAGTVADAAPVVPVSAVLKYNIDVVCEYLAKDVPVPVRDFTSVPRLIVIRSFDVNKPGESVEGLRGGVAGGSILQGVLRVGDEIEVRPGIVAKDANGGVKCTPIFSKVVSLYAEANDLQYAVPGGLIGVGTR---IDPTLTRADRLVGQVLGTRGNLPSVFTEIEISFYLLRRLLGVKTQEGGKQAKVQKLSK-EILMVNIGSTATGGKVLAVKEDLAKVLLTQPVCTQEGEKIALSRRVDKHWRLIGWGQIRRGSKLEIS 474          
BLAST of mRNA_C-australica_Contig_1032.5.1 vs. uniprot
Match: A0A7S2MPR4_9STRA (Protein-synthesizing GTPase n=3 Tax=Lithodesmiaceae TaxID=49247 RepID=A0A7S2MPR4_9STRA)

HSP 1 Score: 704 bits (1818), Expect = 3.670e-246
Identity = 364/479 (75.99%), Postives = 412/479 (86.01%), Query Frame = 3
Query: 1029 QKKQSHLKVQDLSTLDPSKLTPLSPEVISRQATINIGTIGHVAHGKSTVVKSISGVQTVRFKNELERNITIKLGYANAKIFKA-------EVEAAEGADKDADAAHEKPGSYCSKGSAHADTF--QERGKTWNLQRHVSFVDCPGHDILMATMLNGAAVMDAALLLVAGNEPCPQPQTSEHLAAVEIMRLQNIIILQNKVDLVKSDQAHAQYEQIKKFVAGTVADDAPIVPVSAVMSYNLDVVCEYICRNIPIPLRDFTSKPRLIVIRSFDVNKPGEEIMDICGGVAGGSIVQGVLRVGDEIEIRPGIVTKDADGN---VKCESIFSRILSLYAEQNDLQYAVPGGLIGVGTKASSVDPTLTRADRLVGQVLGLKGYLPDVYTEVEISYYLLRRLLGVKTSEGSKQAKVQKLAKQEILMVNIGSTASGGKVLAIKQDLAKILLTQPVCTQEGEKIALSRRVDKHWRLIGWGQIRRGSKI 2429
            +KKQ HL  QD  T+DPSKLT LSPEVISRQATIN+GTIGHVAHGKSTVVK+ISGVQTVRFKNELERNITIKLGYANAKI+K        E E+ EG   D     ++ G Y S+GS+H DTF  ++ G T++L+RHVSFVDCPGHDILMATMLNGAAVMDAALLLVAGNE CPQPQTSEHLAAVEIMRL+NIIILQNKVDLVK D A AQ+EQI+KFVAGTVAD AP++P+SAV+ +N+DVVCEY+   IP+P+RDFTS PRLIVIRSFDVNKPG+++ D+ GGVAGGSI+QGVLRVGDEIE+RPGIV +  DG+   + C  IFSR+ SLYAE NDLQ+AVPGGLIGVGT+   +DPTLTRADRLVGQVLGLKG LPDV+ E+EISYYLLRRLLGVKTS+G KQAKVQKL + EILMVNIGSTA+GGKV A+K DLAKI LT PVCTQEGEKIALSRRVDKHWRLIGWGQIR+G+KI
Sbjct:   11 EKKQPHLMAQDAKTVDPSKLTALSPEVISRQATINVGTIGHVAHGKSTVVKAISGVQTVRFKNELERNITIKLGYANAKIYKGGPLASEDEKESTEGEGGDEGVQRQQGGFYTSRGSSHPDTFTDEKTGITYHLRRHVSFVDCPGHDILMATMLNGAAVMDAALLLVAGNETCPQPQTSEHLAAVEIMRLENIIILQNKVDLVKPDAALAQHEQIRKFVAGTVADSAPVIPISAVLKHNIDVVCEYLVHRIPVPMRDFTSVPRLIVIRSFDVNKPGQDVQDLQGGVAGGSILQGVLRVGDEIEVRPGIVDRSPDGDGTSMVCSPIFSRVSSLYAESNDLQFAVPGGLIGVGTR---IDPTLTRADRLVGQVLGLKGQLPDVFAEMEISYYLLRRLLGVKTSDGGKQAKVQKLQRAEILMVNIGSTATGGKVQAVKGDLAKIALTTPVCTQEGEKIALSRRVDKHWRLIGWGQIRKGTKI 486          
BLAST of mRNA_C-australica_Contig_1032.5.1 vs. uniprot
Match: A0A7S2S9W6_9STRA (Protein-synthesizing GTPase n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2S9W6_9STRA)

HSP 1 Score: 696 bits (1797), Expect = 5.550e-243
Identity = 367/488 (75.20%), Postives = 421/488 (86.27%), Query Frame = 3
Query: 1014 GGDGRQKKQSHLKVQDLSTLDPSKLTPLSPEVISRQATINIGTIGHVAHGKSTVVKSISGVQTVRFKNELERNITIKLGYANAKIFK----AEVEAAEGADKDADAAHEKP------GSYCSKGSAHADTF--QERGKTWNLQRHVSFVDCPGHDILMATMLNGAAVMDAALLLVAGNEPCPQPQTSEHLAAVEIMRLQNIIILQNKVDLVKSDQAHAQYEQIKKFVAGTVADDAPIVPVSAVMSYNLDVVCEYICRNIPIPLRDFTSKPRLIVIRSFDVNKPGEEIMDICGGVAGGSIVQGVLRVGDEIEIRPGIVTKD--ADG--NVKCESIFSRILSLYAEQNDLQYAVPGGLIGVGTKASSVDPTLTRADRLVGQVLGLKGYLPDVYTEVEISYYLLRRLLGVKTSEGSKQAKVQKLAKQEILMVNIGSTASGGKVLAIKQDLAKILLTQPVCTQEGEKIALSRRVDKHWRLIGWGQIRRGSKI 2429
            GG   +KKQ+HL  Q+ STL+PSKLT LSPEVISRQATINIGTIGHVAHGKSTVVK+ISGVQTVRFK+ELERNITIKLGYANAKI+K    A+ +A+E  +++ +   E+       G Y S+GS+H D F  ++ G T+ L+RHVSFVDCPGHDILMATMLNGAAVMDAA+LLVAGNE CPQPQTSEHLAAVEIMRL+NI+ILQNKVDLVK D A AQ+EQI+KFVAGTVAD API+P+SAV+ YN+DVVCEYI   IP+P RDF S PRLIVIRSFDVNKPG+++ ++ GGVAGGSI+QGVLRVGDEIE+RPGIV+K   ADG   ++C  IFSRI SLYAE NDL+YAVPGGLIGVGT+   +DPTLTRADRLVGQVLGLKG+LPDV++E+EISYYLLRRLLGVKTS+G KQAKVQKL+K EILMVNIGSTA+GGKV A+K DLAKI LTQPVCT EGEKIALSRRVDKHWRLIGWGQIR+G+KI
Sbjct:    2 GGTEFEKKQTHLMAQNASTLEPSKLTALSPEVISRQATINIGTIGHVAHGKSTVVKAISGVQTVRFKSELERNITIKLGYANAKIYKGDTIAKPDASEAKNENEEEVEEEVTNCQLGGFYTSRGSSHPDMFVDEKTGITYRLRRHVSFVDCPGHDILMATMLNGAAVMDAAMLLVAGNETCPQPQTSEHLAAVEIMRLENILILQNKVDLVKPDAALAQHEQIRKFVAGTVADSAPIIPISAVLKYNIDVVCEYIVHKIPVPTRDFLSVPRLIVIRSFDVNKPGQDVSNLQGGVAGGSILQGVLRVGDEIEVRPGIVSKSETADGAPTMRCSPIFSRISSLYAESNDLEYAVPGGLIGVGTR---IDPTLTRADRLVGQVLGLKGHLPDVFSEIEISYYLLRRLLGVKTSDGGKQAKVQKLSKSEILMVNIGSTATGGKVQAVKGDLAKIGLTQPVCTTEGEKIALSRRVDKHWRLIGWGQIRKGNKI 486          
BLAST of mRNA_C-australica_Contig_1032.5.1 vs. uniprot
Match: K3WE95_GLOUD (Protein-synthesizing GTPase n=29 Tax=Oomycota TaxID=4762 RepID=K3WE95_GLOUD)

HSP 1 Score: 695 bits (1793), Expect = 8.010e-243
Identity = 356/467 (76.23%), Postives = 405/467 (86.72%), Query Frame = 3
Query: 1038 QSHLKVQDLSTLDPSKLTPLSPEVISRQATINIGTIGHVAHGKSTVVKSISGVQTVRFKNELERNITIKLGYANAKIFKAEVEAAEGADKDADAAHEKPGSYCSKGSAHADTFQER---GKTWNLQRHVSFVDCPGHDILMATMLNGAAVMDAALLLVAGNEPCPQPQTSEHLAAVEIMRLQNIIILQNKVDLVKSDQAHAQYEQIKKFVAGTVADDAPIVPVSAVMSYNLDVVCEYICRNIPIPLRDFTSKPRLIVIRSFDVNKPGEEIMDICGGVAGGSIVQGVLRVGDEIEIRPGIVTKDADGNVKCESIFSRILSLYAEQNDLQYAVPGGLIGVGTKASSVDPTLTRADRLVGQVLGLKGYLPDVYTEVEISYYLLRRLLGVKTSEGSKQAKVQKLAKQEILMVNIGSTASGGKVLAIKQDLAKILLTQPVCTQEGEKIALSRRVDKHWRLIGWGQIRRGSKI 2429
            Q HL VQDL+ L   +LTPL+PEVISRQATINIGTIGHVAHGKSTVV++ISGVQTVRFKNELERNITIKLGYANAKI++AE     G              Y + GS+  D F +       W LQRHVSFVDCPGHDILMATMLNGAAVMDAALLLVAGNE CPQPQTSEHLAA+EIMRLQNIIILQNKVDL+K D A AQ+EQIKKFVAGTVA DAPI+P+SAV+ YN+DVVCEYICRNIPIP RDFTSKP+LIVIRSFDVNKPGE++ ++ GGVAGGSI++GVLRVGDEIE+RPGIV+KD +G + C  I+SRI+SL+AE+NDLQ+AVPGGLIGVGT+   +DPTLTR+DRLVGQVLGLKG LP V+TE+EI++YLL+RLLGVKT EGSK +KVQKL+K E+LMVNIGSTA+GGKVLA+KQDLAKILLT PVCTQEGEKIA+SRR+DKHWRLIGWGQIRRGS+I
Sbjct:    7 QKHLAVQDLAKLKVEELTPLTPEVISRQATINIGTIGHVAHGKSTVVRAISGVQTVRFKNELERNITIKLGYANAKIYRAENGTGIGC-------------YRAFGSSKPDRFVDEVDDNTVWVLQRHVSFVDCPGHDILMATMLNGAAVMDAALLLVAGNEVCPQPQTSEHLAAIEIMRLQNIIILQNKVDLIKEDAACAQHEQIKKFVAGTVAHDAPIIPISAVLKYNIDVVCEYICRNIPIPKRDFTSKPKLIVIRSFDVNKPGEDVENLKGGVAGGSILEGVLRVGDEIEVRPGIVSKDDEGKMTCVPIYSRIVSLFAEKNDLQFAVPGGLIGVGTR---IDPTLTRSDRLVGQVLGLKGSLPHVFTELEINFYLLKRLLGVKTQEGSKASKVQKLSKAEVLMVNIGSTATGGKVLAVKQDLAKILLTAPVCTQEGEKIAISRRIDKHWRLIGWGQIRRGSRI 457          
BLAST of mRNA_C-australica_Contig_1032.5.1 vs. uniprot
Match: A0A485L6X1_9STRA (Protein-synthesizing GTPase n=6 Tax=Saprolegniaceae TaxID=4764 RepID=A0A485L6X1_9STRA)

HSP 1 Score: 695 bits (1793), Expect = 9.620e-243
Identity = 357/466 (76.61%), Postives = 410/466 (87.98%), Query Frame = 3
Query: 1041 SHLKVQDLSTLDPSKLTPLSPEVISRQATINIGTIGHVAHGKSTVVKSISGVQTVRFKNELERNITIKLGYANAKIFKAEVEAAEGADKDADAAHEKPGS--YCSKGSAHADTF-QERGKTWNLQRHVSFVDCPGHDILMATMLNGAAVMDAALLLVAGNEPCPQPQTSEHLAAVEIMRLQNIIILQNKVDLVKSDQAHAQYEQIKKFVAGTVADDAPIVPVSAVMSYNLDVVCEYICRNIPIPLRDFTSKPRLIVIRSFDVNKPGEEIMDICGGVAGGSIVQGVLRVGDEIEIRPGIVTKDADGNVKCESIFSRILSLYAEQNDLQYAVPGGLIGVGTKASSVDPTLTRADRLVGQVLGLKGYLPDVYTEVEISYYLLRRLLGVKTSEGSKQAKVQKLAKQEILMVNIGSTASGGKVLAIKQDLAKILLTQPVCTQEGEKIALSRRVDKHWRLIGWGQIRRGSKI 2429
            S L VQDL+TLD   LTPL+PEVISRQATINIGTIGHVAHGKSTVVK+ISGVQTVRFKNELERNITIKLGYANAKI+++E +A + A  D DAA   P    Y + GS+  D F  ++G TW LQRHVSFVDCPGHDILMATMLNGAAVMDAALLL+AGNE CPQPQTSEHLAAVEIMRLQNIIILQNKVDL+K D A AQ+EQ+K+FVAGTVA +API+P+SAV+ YN+D+VCE+I RNIPIP RDFTSKP+LIVIRSFDVNKPG+++  + GGVAGGSI+QGVLR+GDEIE+RPGI +KD DG V C  IFSRI+SL AE+NDLQYAVPGGLIGVGT    +DPTLTR+DRLVGQVLGLKG LPDV+TE+EI++YLLRRLLGVKT+EGSK ++V+KL K E+LM+NIGST SG K+LA+K DLAKI+LTQPVCTQEGEKIALSRR+DKHWRLIGWG+IRRG+KI
Sbjct:    4 SPLAVQDLTTLDVKALTPLTPEVISRQATINIGTIGHVAHGKSTVVKAISGVQTVRFKNELERNITIKLGYANAKIYRSEPQAPKPASSD-DAAPAAPTGPMYSAFGSSKPDRFTDDKGVTWALQRHVSFVDCPGHDILMATMLNGAAVMDAALLLIAGNEVCPQPQTSEHLAAVEIMRLQNIIILQNKVDLIKPDAAKAQHEQVKQFVAGTVAANAPIIPISAVLKYNIDLVCEHIVRNIPIPRRDFTSKPKLIVIRSFDVNKPGQDVESLEGGVAGGSILQGVLRIGDEIEVRPGIFSKDDDGKVNCTPIFSRIVSLKAEKNDLQYAVPGGLIGVGTL---IDPTLTRSDRLVGQVLGLKGSLPDVFTELEINFYLLRRLLGVKTTEGSKGSRVEKLTKAEVLMINIGSTTSGAKILAVKADLAKIVLTQPVCTQEGEKIALSRRIDKHWRLIGWGEIRRGTKI 465          
BLAST of mRNA_C-australica_Contig_1032.5.1 vs. uniprot
Match: A0A7S4A8Q2_9STRA (Protein-synthesizing GTPase n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4A8Q2_9STRA)

HSP 1 Score: 694 bits (1792), Expect = 1.050e-242
Identity = 357/466 (76.61%), Postives = 400/466 (85.84%), Query Frame = 3
Query: 1047 LKVQDLSTLDPSKLTPLSPEVISRQATINIGTIGHVAHGKSTVVKSISGVQTVRFKNELERNITIKLGYANAKIFKAEVEAAEGADKDADAAHEKPGSYCSKGSAHADTFQER-GKTWNLQRHVSFVDCPGHDILMATMLNGAAVMDAALLLVAGNEPCPQPQTSEHLAAVEIMRLQNIIILQNKVDLVKSDQAHAQYEQIKKFVAGTVADDAPIVPVSAVMSYNLDVVCEYICRNIPIPLRDFTSKPRLIVIRSFDVNKPGEEIMDICGGVAGGSIVQGVLRVGDEIEIRPGIVTKDADGNVKCESIFSRILSLYAEQNDLQYAVPGGLIGVGTKASSVDPTLTRADRLVGQVLGLKGYLPDVYTEVEISYYLLRRLLGVKTSEGSKQAKVQKLAKQEILMVNIGSTASGGKVLAIKQDLAKILLTQPVCTQEGEKIALSRRVDKHWRLIGWGQIRRGSKIAASA 2441
            L VQD   LDP+ LTP +PEVISRQAT+NIGTIGHVAHGKSTVVK+ISGVQTVRFKNELERNITIKLGYANAKI+K   E               PG++CS+GSA  D F++  G  W L RHVSFVDCPGHDILMATMLNGAAVMDAALLLVAGNEPCPQPQTSEHLAAVEIMRL+NI+ILQNKVDLVK DQA AQ+EQI+KFVAGTVA DAP++P+SAV+ YN+D VCEY+   IP P+RDFTS PRLIVIRSFDVNKPGE++ ++ GGVAGGSI+QGVLR+ DE+E+RPGIVTKDA G V    I+SR+ SL AE+N L+YAVPGGLIGVGT    +DPTLTRADRLVGQVLGLKG LPDV+ EVEIS+YLLRRLLGVKTSEG+KQAKVQKL KQEILMVNIGSTA+GGKVLA+K DLAKILLTQPVCT EGEKIALSRRVDKHWRLIGWGQIRRG+++  +A
Sbjct:    8 LAVQDRRALDPAALTPDTPEVISRQATVNIGTIGHVAHGKSTVVKAISGVQTVRFKNELERNITIKLGYANAKIYKRVAE------------RPGPGNFCSRGSATPDAFEDGDGARWALARHVSFVDCPGHDILMATMLNGAAVMDAALLLVAGNEPCPQPQTSEHLAAVEIMRLENILILQNKVDLVKPDQARAQHEQIRKFVAGTVAGDAPVIPISAVLKYNIDAVCEYVAHAIPTPVRDFTSTPRLIVIRSFDVNKPGEDVANLKGGVAGGSILQGVLRLEDEVEVRPGIVTKDAAGAVTATPIYSRVASLLAERNRLEYAVPGGLIGVGTH---IDPTLTRADRLVGQVLGLKGRLPDVFIEVEISFYLLRRLLGVKTSEGAKQAKVQKLQKQEILMVNIGSTATGGKVLAVKADLAKILLTQPVCTTEGEKIALSRRVDKHWRLIGWGQIRRGARVEVAA 458          
BLAST of mRNA_C-australica_Contig_1032.5.1 vs. uniprot
Match: A0A6U4HRZ6_9STRA (Protein-synthesizing GTPase n=4 Tax=Phaeomonas parva TaxID=124430 RepID=A0A6U4HRZ6_9STRA)

HSP 1 Score: 695 bits (1794), Expect = 2.120e-242
Identity = 354/465 (76.13%), Postives = 404/465 (86.88%), Query Frame = 3
Query: 1035 KQSHLKVQDLSTLDPSKLTPLSPEVISRQATINIGTIGHVAHGKSTVVKSISGVQTVRFKNELERNITIKLGYANAKIFKAEVEAAEGADKDADAAHEKPGSYCSKGSAHADTFQERGKTWNLQRHVSFVDCPGHDILMATMLNGAAVMDAALLLVAGNEPCPQPQTSEHLAAVEIMRLQNIIILQNKVDLVKSDQAHAQYEQIKKFVAGTVADDAPIVPVSAVMSYNLDVVCEYICRNIPIPLRDFTSKPRLIVIRSFDVNKPGEEIMDICGGVAGGSIVQGVLRVGDEIEIRPGIVTKDADGNVKCESIFSRILSLYAEQNDLQYAVPGGLIGVGTKASSVDPTLTRADRLVGQVLGLKGYLPDVYTEVEISYYLLRRLLGVKTSEGSKQAKVQKLAKQEILMVNIGSTASGGKVLAIKQDLAKILLTQPVCTQEGEKIALSRRVDKHWRLIGWGQIRRGSKI 2429
            +Q HL VQDL+TLD + LTP +PEVISRQATINIGTIGHVAHGKSTVV+S+SGVQTVRFKNEL RNITIKLGYANAK++KA            DAA   PG+Y SKGSAH D F+E GKTW LQRHVSFVDCPGHDILMATMLNGAAVMDAALLL+AGNEPCPQPQTSEHLAAVEIMRLQ+IIILQNKVDLVK + A AQ++QI++FVAGTVAD AP++P+SAV+ YN+DV+CEY+   +P P RDF S PRLIVIRSFDVNKPG E  ++ GGVAGGSI+QGVLRVGD IEIRPGI++K+ DG+++ E I+S + SLYAEQNDLQYAVPGGLIGVGT    +DPTLTRADRLVGQVLGL+  LP ++TEVEIS+YLL+RLLGVKTSEGSKQ KV KL K E LMVNIGSTA+GG+V+A+K++ AKILLTQPVCTQEGEKIALSRRVDKHWRLIGWGQIRRG++I
Sbjct:   33 RQDHLAVQDLATLDVTTLTPSTPEVISRQATINIGTIGHVAHGKSTVVRSVSGVQTVRFKNELVRNITIKLGYANAKLYKAR-----------DAAPGVPGNYRSKGSAHPDVFEEDGKTWELQRHVSFVDCPGHDILMATMLNGAAVMDAALLLIAGNEPCPQPQTSEHLAAVEIMRLQHIIILQNKVDLVKEEDALAQHQQIRRFVAGTVADSAPVIPMSAVLKYNVDVLCEYLVHRVPEPRRDFLSVPRLIVIRSFDVNKPGMEAAELRGGVAGGSILQGVLRVGDRIEIRPGILSKNNDGSMRAEPIYSVVKSLYAEQNDLQYAVPGGLIGVGTL---IDPTLTRADRLVGQVLGLRDQLPSIFTEVEISFYLLKRLLGVKTSEGSKQTKVGKLKKDETLMVNIGSTATGGRVVAVKKEKAKILLTQPVCTQEGEKIALSRRVDKHWRLIGWGQIRRGTRI 483          
BLAST of mRNA_C-australica_Contig_1032.5.1 vs. uniprot
Match: A0A1V9ZGR8_9STRA (Protein-synthesizing GTPase n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9ZGR8_9STRA)

HSP 1 Score: 687 bits (1773), Expect = 8.230e-240
Identity = 352/464 (75.86%), Postives = 403/464 (86.85%), Query Frame = 3
Query: 1041 SHLKVQDLSTLDPSKLTPLSPEVISRQATINIGTIGHVAHGKSTVVKSISGVQTVRFKNELERNITIKLGYANAKIFKAEVEAAEGADKDADAAHEKPGSYCSKGSAHADTF-QERGKTWNLQRHVSFVDCPGHDILMATMLNGAAVMDAALLLVAGNEPCPQPQTSEHLAAVEIMRLQNIIILQNKVDLVKSDQAHAQYEQIKKFVAGTVADDAPIVPVSAVMSYNLDVVCEYICRNIPIPLRDFTSKPRLIVIRSFDVNKPGEEIMDICGGVAGGSIVQGVLRVGDEIEIRPGIVTKDADGNVKCESIFSRILSLYAEQNDLQYAVPGGLIGVGTKASSVDPTLTRADRLVGQVLGLKGYLPDVYTEVEISYYLLRRLLGVKTSEGSKQAKVQKLAKQEILMVNIGSTASGGKVLAIKQDLAKILLTQPVCTQEGEKIALSRRVDKHWRLIGWGQIRRGSKI 2429
            S L VQDLS LD + LTP++PEVISRQATINIGTIGHVAHGKSTVVK+I+GVQTVRF+ ELERNITIKLGYANAKI+++E    E     A AA  +P  Y   GS+ AD F  + G +W LQRHVSFVDCPGHD+LMATMLNGAAVMDAALLLVAGNEPCPQPQTSEHLAAVEIMRLQNIIILQNKVDL+K D A AQ EQ+K+FVAGT+A++API+P++AV+ YN+DVVCEYI RNIPIP RDF S+P+LI+IRSFDVNKPGEE+ ++ GGVAGGSI+QGVLR+GDEIE+RPGI TKD DGNV+C SIFSRI+SL AE N+LQYAVPGGLIGVGT    +DPTLTR+DRLVGQVLGLKG LPD+YTE+EI++YLLRRLLGVKTSE SK +KVQKL K E+LM+NIGST +G KV+A+K DLAKILLTQPVCTQ  EKIALSRR+ KHWRLIGWG+IRRG KI
Sbjct:    5 SQLAVQDLSALDQTTLTPITPEVISRQATINIGTIGHVAHGKSTVVKAIAGVQTVRFQKELERNITIKLGYANAKIYRSEPSGVE-----AGAAPARP-KYAGFGSSMADRFTDDNGVSWALQRHVSFVDCPGHDVLMATMLNGAAVMDAALLLVAGNEPCPQPQTSEHLAAVEIMRLQNIIILQNKVDLIKPDAAKAQREQVKQFVAGTIANEAPIIPIAAVLKYNIDVVCEYIVRNIPIPRRDFVSRPKLIIIRSFDVNKPGEEVENLHGGVAGGSILQGVLRIGDEIEVRPGICTKDKDGNVQCMSIFSRIVSLKAENNELQYAVPGGLIGVGTL---MDPTLTRSDRLVGQVLGLKGSLPDIYTELEINFYLLRRLLGVKTSEDSKASKVQKLTKAEVLMINIGSTTTGAKVIAVKDDLAKILLTQPVCTQVKEKIALSRRIGKHWRLIGWGEIRRGVKI 459          
BLAST of mRNA_C-australica_Contig_1032.5.1 vs. uniprot
Match: F0Y3F3_AURAN (Protein-synthesizing GTPase n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y3F3_AURAN)

HSP 1 Score: 687 bits (1772), Expect = 1.560e-239
Identity = 358/467 (76.66%), Postives = 398/467 (85.22%), Query Frame = 3
Query: 1047 LKVQDLSTLDPSKLTPLSPEVISRQATINIGTIGHVAHGKSTVVKSISGVQTVRFKNELERNITIKLGYANAKIFKAEVEAAEGADKDADAAHEKPGSYCSKGSAHADTFQERGK--TWNLQRHVSFVDCPGHDILMATMLNGAAVMDAALLLVAGNEPCPQPQTSEHLAAVEIMRLQNIIILQNKVDLVKSDQAHAQYEQIKKFVAGTVADDAPIVPVSAVMSYNLDVVCEYICRNIPIPLRDFTSKPRLIVIRSFDVNKPGEEIMDICGGVAGGSIVQGVLRVGDEIEIRPGIVTKDADGNVKCESIFSRILSLYAEQNDLQYAVPGGLIGVGTKASSVDPTLTRADRLVGQVLGLKGYLPDVYTEVEISYYLLRRLLGVKTSEGSKQAKVQKLAKQEILMVNIGSTASGGKVLAIKQDLAKILLTQPVCTQEGEKIALSRRVDKHWRLIGWGQIRRGSKIAASA 2441
            L VQDL+TLD S L+P +PEVISRQATINIGTIGHVAHGKSTVVK+ISGVQTVRFKNELERNITIKLGYANAKI+K  V+   G           PG++ S GS+  D F +      W L RHVSFVDCPGHDILMATMLNGAAVMDAALLLVAGNEPCPQPQTSEHLAAVEIMRL+NIIILQNKVDLVK D A AQ+EQIKKFVAGTVAD API+P+SAV+ YN+D VCEY+   IP P RDF S PRLIVIRSFDVNKPGE++  + GGVAGGSI+QGVL++GDE+E+RPGIV KDA G V C  I+S+++SL+AE N LQYAVPGGLIGVGT    +DPTLTRADRLVGQVLGLK +LPDV+ EVEIS+YLLRRLLGVKTSEGSKQAKVQKL KQEILMVNIGSTA+GGKVLA+K DLAKILLTQPVCT EGEKIALSRRVDKHWRLIGWGQIRRG+++  +A
Sbjct:   18 LAVQDLATLDVSSLSPATPEVISRQATINIGTIGHVAHGKSTVVKAISGVQTVRFKNELERNITIKLGYANAKIYKR-VDEQPG-----------PGNFRSFGSSKPDAFTDPATKIAWKLVRHVSFVDCPGHDILMATMLNGAAVMDAALLLVAGNEPCPQPQTSEHLAAVEIMRLENIIILQNKVDLVKPDAALAQHEQIKKFVAGTVADAAPIIPISAVLKYNVDAVCEYLAHAIPTPARDFASLPRLIVIRSFDVNKPGEDVEHLKGGVAGGSILQGVLKMGDEVEVRPGIVKKDAQGTVSCTPIYSKVVSLFAESNALQYAVPGGLIGVGTH---IDPTLTRADRLVGQVLGLKAHLPDVFIEVEISFYLLRRLLGVKTSEGSKQAKVQKLQKQEILMVNIGSTATGGKVLAVKADLAKILLTQPVCTMEGEKIALSRRVDKHWRLIGWGQIRRGARVDINA 469          
The following BLAST results are available for this feature:
BLAST of mRNA_C-australica_Contig_1032.5.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835YYS7_9STRA8.590e-26982.69Protein-synthesizing GTPase n=2 Tax=Tribonema minu... [more]
A0A6S9GDD6_HETAK4.910e-25579.54Protein-synthesizing GTPase n=1 Tax=Heterosigma ak... [more]
A0A7S2MPR4_9STRA3.670e-24675.99Protein-synthesizing GTPase n=3 Tax=Lithodesmiacea... [more]
A0A7S2S9W6_9STRA5.550e-24375.20Protein-synthesizing GTPase n=1 Tax=Eucampia antar... [more]
K3WE95_GLOUD8.010e-24376.23Protein-synthesizing GTPase n=29 Tax=Oomycota TaxI... [more]
A0A485L6X1_9STRA9.620e-24376.61Protein-synthesizing GTPase n=6 Tax=Saprolegniacea... [more]
A0A7S4A8Q2_9STRA1.050e-24276.61Protein-synthesizing GTPase n=1 Tax=Pelagomonas ca... [more]
A0A6U4HRZ6_9STRA2.120e-24276.13Protein-synthesizing GTPase n=4 Tax=Phaeomonas par... [more]
A0A1V9ZGR8_9STRA8.230e-24075.86Protein-synthesizing GTPase n=1 Tax=Achlya hypogyn... [more]
F0Y3F3_AURAN1.560e-23976.66Protein-synthesizing GTPase n=1 Tax=Aureococcus an... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-australica_Contig_1032contigC-australica_Contig_1032:6015..10516 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Chrysoparadoxa australica CS_1217 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog112098.XP_008613264.1
Preferred nameeIF-2gamma
PFAMsChromo,GTP_EFTU,GTP_EFTU_D2,Pre-SET,SET,eIF2_C
Model size2544
Max annot lvl2759|Eukaryota
KEGG rclassRC00003,RC00060,RC00181,RC00496
KEGG koko:K03242,ko:K04257,ko:K11419
KEGG ReactionR03875,R03938,R04866,R04867
KEGG Pathwayko00310,ko03013,ko04740,map00310,map03013,map04740
Hectar predicted targeting categoryother localisation
GOsGO:0001731,GO:0002181,GO:0002183,GO:0003674,GO:0003676,GO:0003723,GO:0003743,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005850,GO:0006412,GO:0006413,GO:0006518,GO:0006807,GO:0008135,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016043,GO:0016282,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043603,GO:0043604,GO:0043614,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0065003,GO:0070993,GO:0071704,GO:0071826,GO:0071840,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904
Exons14
Evalue4.05e-254
EggNOG OGsCOG3276@1|root,KOG0466@2759|Eukaryota
Ec32 ortholog descriptionEIF2S3, gamma subunit of the eukaryotic translation initiation factor 2
Ec32 orthologEc-02_004090.1
EC2.1.1.43
Descriptiontranslation initiation factor activity
Cds size1473
COG categoryJ
BRITEko00000,ko00001,ko01000,ko03012,ko03036,ko04030
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_C-australica_Contig_1032.5.1prot_C-australica_Contig_1032.5.1Chrysoparadoxa australica CS_1217polypeptideC-australica_Contig_1032 6115..9545 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1682586770.1330335-UTR-C-australica_Contig_1032:6014..61141682586770.1330335-UTR-C-australica_Contig_1032:6014..6114Chrysoparadoxa australica CS_1217UTRC-australica_Contig_1032 6015..6114 -
1682586770.2819977-UTR-C-australica_Contig_1032:9545..105161682586770.2819977-UTR-C-australica_Contig_1032:9545..10516Chrysoparadoxa australica CS_1217UTRC-australica_Contig_1032 9546..10516 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1682586770.1455991-CDS-C-australica_Contig_1032:6114..62131682586770.1455991-CDS-C-australica_Contig_1032:6114..6213Chrysoparadoxa australica CS_1217CDSC-australica_Contig_1032 6115..6213 -
1682586770.1555486-CDS-C-australica_Contig_1032:6321..64501682586770.1555486-CDS-C-australica_Contig_1032:6321..6450Chrysoparadoxa australica CS_1217CDSC-australica_Contig_1032 6322..6450 -
1682586770.164025-CDS-C-australica_Contig_1032:6691..67631682586770.164025-CDS-C-australica_Contig_1032:6691..6763Chrysoparadoxa australica CS_1217CDSC-australica_Contig_1032 6692..6763 -
1682586770.1751454-CDS-C-australica_Contig_1032:6932..70161682586770.1751454-CDS-C-australica_Contig_1032:6932..7016Chrysoparadoxa australica CS_1217CDSC-australica_Contig_1032 6933..7016 -
1682586770.1843262-CDS-C-australica_Contig_1032:7124..72501682586770.1843262-CDS-C-australica_Contig_1032:7124..7250Chrysoparadoxa australica CS_1217CDSC-australica_Contig_1032 7125..7250 -
1682586770.1930032-CDS-C-australica_Contig_1032:7398..75051682586770.1930032-CDS-C-australica_Contig_1032:7398..7505Chrysoparadoxa australica CS_1217CDSC-australica_Contig_1032 7399..7505 -
1682586770.2016232-CDS-C-australica_Contig_1032:7591..76501682586770.2016232-CDS-C-australica_Contig_1032:7591..7650Chrysoparadoxa australica CS_1217CDSC-australica_Contig_1032 7592..7650 -
1682586770.2115047-CDS-C-australica_Contig_1032:7730..78361682586770.2115047-CDS-C-australica_Contig_1032:7730..7836Chrysoparadoxa australica CS_1217CDSC-australica_Contig_1032 7731..7836 -
1682586770.2214656-CDS-C-australica_Contig_1032:8015..80791682586770.2214656-CDS-C-australica_Contig_1032:8015..8079Chrysoparadoxa australica CS_1217CDSC-australica_Contig_1032 8016..8079 -
1682586770.2323909-CDS-C-australica_Contig_1032:8250..83491682586770.2323909-CDS-C-australica_Contig_1032:8250..8349Chrysoparadoxa australica CS_1217CDSC-australica_Contig_1032 8251..8349 -
1682586770.240661-CDS-C-australica_Contig_1032:8452..85671682586770.240661-CDS-C-australica_Contig_1032:8452..8567Chrysoparadoxa australica CS_1217CDSC-australica_Contig_1032 8453..8567 -
1682586770.2484713-CDS-C-australica_Contig_1032:8840..90251682586770.2484713-CDS-C-australica_Contig_1032:8840..9025Chrysoparadoxa australica CS_1217CDSC-australica_Contig_1032 8841..9025 -
1682586770.2663023-CDS-C-australica_Contig_1032:9092..92781682586770.2663023-CDS-C-australica_Contig_1032:9092..9278Chrysoparadoxa australica CS_1217CDSC-australica_Contig_1032 9093..9278 -
1682586770.2741694-CDS-C-australica_Contig_1032:9503..95451682586770.2741694-CDS-C-australica_Contig_1032:9503..9545Chrysoparadoxa australica CS_1217CDSC-australica_Contig_1032 9504..9545 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_C-australica_Contig_1032.5.1

>prot_C-australica_Contig_1032.5.1 ID=prot_C-australica_Contig_1032.5.1|Name=mRNA_C-australica_Contig_1032.5.1|organism=Chrysoparadoxa australica CS_1217|type=polypeptide|length=491bp
MADFVEGAESKKDGGGDGRQKKQSHLKVQDLSTLDPSKLTPLSPEVISRQ
ATINIGTIGHVAHGKSTVVKSISGVQTVRFKNELERNITIKLGYANAKIF
KAEVEAAEGADKDADAAHEKPGSYCSKGSAHADTFQERGKTWNLQRHVSF
VDCPGHDILMATMLNGAAVMDAALLLVAGNEPCPQPQTSEHLAAVEIMRL
QNIIILQNKVDLVKSDQAHAQYEQIKKFVAGTVADDAPIVPVSAVMSYNL
DVVCEYICRNIPIPLRDFTSKPRLIVIRSFDVNKPGEEIMDICGGVAGGS
IVQGVLRVGDEIEIRPGIVTKDADGNVKCESIFSRILSLYAEQNDLQYAV
PGGLIGVGTKASSVDPTLTRADRLVGQVLGLKGYLPDVYTEVEISYYLLR
RLLGVKTSEGSKQAKVQKLAKQEILMVNIGSTASGGKVLAIKQDLAKILL
TQPVCTQEGEKIALSRRVDKHWRLIGWGQIRRGSKIAASA*
back to top

mRNA from alignment at C-australica_Contig_1032:6015..10516-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_C-australica_Contig_1032.5.1 ID=mRNA_C-australica_Contig_1032.5.1|Name=mRNA_C-australica_Contig_1032.5.1|organism=Chrysoparadoxa australica CS_1217|type=mRNA|length=4502bp|location=Sequence derived from alignment at C-australica_Contig_1032:6015..10516- (Chrysoparadoxa australica CS_1217)
CAGTCCGGGACCCCTCTTGCACCATCTGATAAAGCTCTCAATCGCCCTCT TCTTCCCCTCAACCTGAGTGAGGCAGGTAAAGCCACCAGAAGTGAGAGGG TTATTATATGGGTATAGGACGGGTTGTCTCTTCACATCGATCGAGGTTGG CAGCTGCCTAGCGACCATGTACAGCAGCCACTTAAACTAACGGCATGTGG AACCCTTTGAGGTGGGCCTTCAAGTGTCTAGGCACTCACCACCATCTCCA CGCCTCCGTCAGGAAGCTCTTTCAATGCCCCACACAAGCGCCTGTTGAAA TAAGCCTCGTTCCGTGCTTGTGCTCTGAAGTACCCACCATGCGCTTGGCC CTTGACCACAATCTTGGCCTCTGCATACCTGGAGAGCCAAGACAGAGTGA GGGGTGAGGGGTAATGAGCGGCGAGGATTGGGGCAGGCGTGTAAACTCTC TTAGGTGCAGCAGGCGGCGAGCCCCTCCTCTCGCCCCGAACAGGACTCCA CGAAACGTAGGCCCACACAAAGCAAGCCCTCCCTTCCAGAACAGCGCTAC CCTCTATGCCACACCTACACAAGAGCTGCAGCGCCTCTCAAGCAGTTGAA CATGAACATGAAGCCGCAACATCTGTCTCTCCTTGCAGGCAGAGCTCAAG ACTTACGTTTCTTCCCCATCAGCATCGCTAGCAGTCATGAAAGTTGGGCC TCTGCAGACCACCCCTCGAGTCTGGGTGTGTCTTTGGAGGAGAGGAGCAG GGCTCCCTGAGAGGGCACCAACAAAAGCATAGGTGGTGGGCAAGCACAGC GCTAGCACCCCCAACCCGATAAAGCCCTTCATAGCAGGAGTTTTGAAGGG CGGAAAGAGCCAAGATTTCTGGGTTTTACGTGGGCGTGGGCAATGGCCTC CCCATAGCCTTAAAGAGCGTTAAGGAGTCTTAGAGTGGAGGTGGGGTGGA CTGCGATCGGAAAACAACTCTATGGCCGATTTTGTGGAAGGCGCGGAGTC CAAGAAGGACGGGGTAAGCTCTGGGGCAGTGGTTAGAGGAGAGCTGGGGA GAGGTGGATTGGCCCCCGAGGGCGCACAGCTCCGTGTGATAGCTGGAACG AGTGCTCTGAGGCCCTGTGTTAGGTTGCATGCTTTCTTGGATGCCTGGAG CAAGCACGCTGCTCACCCAAGTATCATAATACTCCTGCCCATTGCCTTGA TGCTTGCAACTCAACTCTGCACCTGCTTCCTCCTGCAGGGTGGAGATGGA AGGCAAAAGAAACAATCTCACCTGAAGGTTCAGGACCTGAGCACTCTGGA TCCCTCCAAGCTCACACCCCTGTCGCCTGAGGTCATCAGCAGACAGGCCA CCATCAACATTGGAACTATTGGCCATGTGGCACACGGAAAGTCAACCGTA GTCAAGTCTATCTCAGGTGTACAGGTGAGTACTGCACTGGAAGAAAGCAA CCTCCCTTTAGCCAACCCTGCCCCATCCCACTCTCCTCCAGACGGTCCGT TTCAAGAATGAGTTGGAGCGTAACATCACAATCAAGCTCGGGTATGCCAA CGCTAAGATTTTCAAAGCTGAGGTAGAGGCTGCGGAAGGGGCAGACAAGG ATGCTGACGCTGCCCATGAGAAGCCGGGGAGCTATTGCTCAAAGGGATCT GCGCATGCTGACACTTTTCAAGAGAGGTGATGACGTTTGTGCATTTGTGC CTGTAGCCCCTAGCTCCTTTGATGTTGCATTCCTGGGGATTGTTCTGCTC TGTTGTCATTGCAAACCCGAGACATGCGTCCTCTTACCTGTGCGGCAACT CATATAAGTCATGTGATGCCGCCATTTGGCCATGTGATTAACCCAACCCA ACCCTTACATGGCATTGTTTTGCGTCAGCCAGCCCATTCTACCCTCGCTT ATCCCTTACCTGGTGCATGCCCTAACTCATCATCACTCATCACTCACAGG GGTAAGACTTGGAATCTGCAGCGCCACGTCAGCTTTGTTGACTGTCCAGG ACACGATATTCTCATGGCAACCATGCTTAACGGCGCTGCAGTCATGGATG CTGCACTGCTGCTGGTAATTTTAGTAGCTGATACCTTGATATGACTTGAG CTGGGAGCTGTAACCACTCTCTCACTCAGCATGATCTGATGGACTCGTTG GACCTGCTCAACATCAGGTGGCAGGGAATGAGCCGTGCCCACAACCTCAA ACATCGGAGCATCTGGCAGCAGTGGAGATCATGCGCCTACAGAACATTAT CATCCTGCAGAACAAGGCATGAACCATCCTACACCATTATCCATACATTT CTCAAAAGCTGTTGCTCTAACTGCTCAACCCATAAGATTTGCCTTTGCAT AACCTAAGAGAACAACTGCCCTTGGTTAAGGTGATCTACCCTCACCAGTT ATGTGTCCCTCAATTGGGCTGCTCCTTCTCATCTCAGGTGGACCTCGTGA AGAGTGACCAGGCTCATGCTCAGTATGAGCAAATCAAGAAGTTTGTTGCA GGTGAGGCCGAGGGACTTGCCCCTCTTTGCTTGTTGGCTCGGTCCAGCTT GCATGGCATGACTCACCTCCACGCTGTGCTTGACTCAATATTCACCGGTG TGAGCTGACTCAAAGCATGAGGCAAGCTCTTCGAGACCGAATGACCCAAA AGCCATTCCTTTCTCTTCCGTCCAAAACAGGCACAGTTGCTGATGATGCT CCAATAGTGCCCGTTAGCGCAGTCATGTCTTATAATCTAGATGTAGTATG CGAGTATATTTGCCGGAACATCCCAATCCCGCTCAGGTACCCCTGCACCC TCTCTCATTATTGCCTAACACTGCTGACGTAATGCCTGCCTGCCTGTTCA CCACCTCTGCTTCCAGGGACTTCACAAGCAAGCCCCGACTAATTGTCATC AGAAGCTTTGACGTCAACAAGCCAGGTAGCCCTGTGTCTCATCTCCTCTC ATTCACTTTGGTCCCTCTCCTCTCTTGACTCACCCTCAACACCCTGCTTC ACCCCGCTCAGGGGAGGAAATTATGGACATCTGTGGCGGTGTTGCGGGTG GATCTATTGTCCAAGGAGTTCTTAGGGTGGGTGATGAGATAGAGATCAGA CCAGGGATCGTCACAAAGGTAGGACCAGACTGCCCTGTTCTTGCTGCTAT AGCTACTCCTCGGGTGGTTGGTGCTCACTACCCCCACTTCACGAGTCACT TCACAAACCATGTCACATCACACATATCACCACCGCCGCATCATCATAAC CTCCCCTCCCCTCCAGGACGCTGACGGAAATGTAAAATGCGAGTCTATAT TCTCCCGCATCCTGTCTCTCTACGCCGAGCAGAATGACCTGCAGTACGCA GTGCCAGGAGGGCTTATCGGTGTGGGCACTAAGGCAAGCAGCGTTGTCCT GTCCTGGCCTGCATATGAGCATGCCGCAGCTCTCGCTCTACTGTGTCCTT TCACTCTCGAGCAGTGGCTGAAGATGTTTCTTTCCCTCTCCTTCCCACAG GTAGACCCTACTTTGACACGAGCTGATCGCCTAGTAGGGCAAGTATTAGG CCTCAAGGGATACCTTCCTGATGTTTACACAGAGGTAATACACTGCACAA CTTGGTTCCGACTCATCCATGCTATGGTTCTCTTCTCCATGTCTCCTTAA CTCCCACCAAAGCAAGCTTGACCAGCTTGGTGCGCTCCTGTTTTTGCGAG TGATTTCACATCCCTTTTGCTCTTACACAATACGTACTCCTTGCTGCGCA CAGGTGGAGATTAGTTACTACCTGCTGCGGCGTCTGCTAGGTGTCAAGAC GAGCGAGGGTAGCAAGCAAGCAAAGGTAAATGGAACTGGAACTGTTCTGT GAATCTGTTGGGCAACTCGAACTCATATCACAACGCCAGCCATGCTTCAC TCATCACTCAGGCACAGATTGTGGCACTATTTTTGCCTTGTTTTTGCCAC ACTTTACTTCCAGGCGGCATCCTTCTTCCGTTAGCCGCGTCTCTTGCTTT CCTTCGCATTCCACACACTTTCTCCCTTTCACTCACAATGTTTCCACTTG TTTTATTCCCTGCCAGGTCCAGAAGCTTGCCAAGCAGGAAATCCTTATGG TCAACATTGGATCAACCGCTAGCGGTGGGAAGGTCCTGGCTATCAAGCAA GACCTGGCAAAGATTCTTCTCACACAGCCTGTGTGCACACAAGAGGTAAG CGTGAGAGCCTCCCCAGTCACCCAGGCACCAGTGTGGCAATGCCTTAACC TACCCCTCAGCTGACTTAAGCGATCCCTCTGTTTATTTCTTTTCTTTTGC CAGGGCGAGAAGATTGCCTTATCCAGGCGAGTTGATAAGCACTGGAGGTT AATCGGATGGGGACAGATCAGGAGGGGCAGTAAGATCGCTGCCAGTGCGT AGGAGTGAAGTGAGTAGGGGTTAGGGGAGAGGCTGCTTTGGACCGGTGGT ATGGTTAGAGCTGCCCCTTTTTTTGCTTGCTCAAATGACTGAAATTGGAT GC
back to top

Coding sequence (CDS) from alignment at C-australica_Contig_1032:6015..10516-

>mRNA_C-australica_Contig_1032.5.1 ID=mRNA_C-australica_Contig_1032.5.1|Name=mRNA_C-australica_Contig_1032.5.1|organism=Chrysoparadoxa australica CS_1217|type=CDS|length=1473bp|location=Sequence derived from alignment at C-australica_Contig_1032:6015..10516- (Chrysoparadoxa australica CS_1217)
ATGGCCGATTTTGTGGAAGGCGCGGAGTCCAAGAAGGACGGGGGTGGAGA
TGGAAGGCAAAAGAAACAATCTCACCTGAAGGTTCAGGACCTGAGCACTC
TGGATCCCTCCAAGCTCACACCCCTGTCGCCTGAGGTCATCAGCAGACAG
GCCACCATCAACATTGGAACTATTGGCCATGTGGCACACGGAAAGTCAAC
CGTAGTCAAGTCTATCTCAGGTGTACAGACGGTCCGTTTCAAGAATGAGT
TGGAGCGTAACATCACAATCAAGCTCGGGTATGCCAACGCTAAGATTTTC
AAAGCTGAGGTAGAGGCTGCGGAAGGGGCAGACAAGGATGCTGACGCTGC
CCATGAGAAGCCGGGGAGCTATTGCTCAAAGGGATCTGCGCATGCTGACA
CTTTTCAAGAGAGGGGTAAGACTTGGAATCTGCAGCGCCACGTCAGCTTT
GTTGACTGTCCAGGACACGATATTCTCATGGCAACCATGCTTAACGGCGC
TGCAGTCATGGATGCTGCACTGCTGCTGGTGGCAGGGAATGAGCCGTGCC
CACAACCTCAAACATCGGAGCATCTGGCAGCAGTGGAGATCATGCGCCTA
CAGAACATTATCATCCTGCAGAACAAGGTGGACCTCGTGAAGAGTGACCA
GGCTCATGCTCAGTATGAGCAAATCAAGAAGTTTGTTGCAGGCACAGTTG
CTGATGATGCTCCAATAGTGCCCGTTAGCGCAGTCATGTCTTATAATCTA
GATGTAGTATGCGAGTATATTTGCCGGAACATCCCAATCCCGCTCAGGGA
CTTCACAAGCAAGCCCCGACTAATTGTCATCAGAAGCTTTGACGTCAACA
AGCCAGGGGAGGAAATTATGGACATCTGTGGCGGTGTTGCGGGTGGATCT
ATTGTCCAAGGAGTTCTTAGGGTGGGTGATGAGATAGAGATCAGACCAGG
GATCGTCACAAAGGACGCTGACGGAAATGTAAAATGCGAGTCTATATTCT
CCCGCATCCTGTCTCTCTACGCCGAGCAGAATGACCTGCAGTACGCAGTG
CCAGGAGGGCTTATCGGTGTGGGCACTAAGGCAAGCAGCGTAGACCCTAC
TTTGACACGAGCTGATCGCCTAGTAGGGCAAGTATTAGGCCTCAAGGGAT
ACCTTCCTGATGTTTACACAGAGGTGGAGATTAGTTACTACCTGCTGCGG
CGTCTGCTAGGTGTCAAGACGAGCGAGGGTAGCAAGCAAGCAAAGGTCCA
GAAGCTTGCCAAGCAGGAAATCCTTATGGTCAACATTGGATCAACCGCTA
GCGGTGGGAAGGTCCTGGCTATCAAGCAAGACCTGGCAAAGATTCTTCTC
ACACAGCCTGTGTGCACACAAGAGGGCGAGAAGATTGCCTTATCCAGGCG
AGTTGATAAGCACTGGAGGTTAATCGGATGGGGACAGATCAGGAGGGGCA
GTAAGATCGCTGCCAGTGCGTAG
back to top