Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Stop | 0 |
| Start | 1 |
| Model size | 416 |
| Hectar predicted targeting category | signal peptide |
| Exons | 4 |
| Cds size | 396 |
Relationships
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1682586769.672992-CDS-C-australica_Contig_1032:1624..1651 | 1682586769.672992-CDS-C-australica_Contig_1032:1624..1651 | Chrysoparadoxa australica CS_1217 | CDS | C-australica_Contig_1032 1625..1651 - |
| 1682586769.6856048-CDS-C-australica_Contig_1032:1759..1836 | 1682586769.6856048-CDS-C-australica_Contig_1032:1759..1836 | Chrysoparadoxa australica CS_1217 | CDS | C-australica_Contig_1032 1760..1836 - |
| 1682586769.6973472-CDS-C-australica_Contig_1032:1908..2031 | 1682586769.6973472-CDS-C-australica_Contig_1032:1908..2031 | Chrysoparadoxa australica CS_1217 | CDS | C-australica_Contig_1032 1909..2031 - |
| 1682586769.7184834-CDS-C-australica_Contig_1032:2090..2259 | 1682586769.7184834-CDS-C-australica_Contig_1032:2090..2259 | Chrysoparadoxa australica CS_1217 | CDS | C-australica_Contig_1032 2091..2259 - |
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1682586769.7309682-UTR-C-australica_Contig_1032:2259..2279 | 1682586769.7309682-UTR-C-australica_Contig_1032:2259..2279 | Chrysoparadoxa australica CS_1217 | UTR | C-australica_Contig_1032 2260..2279 - |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-australica_Contig_1032.2.1 >prot_C-australica_Contig_1032.2.1 ID=prot_C-australica_Contig_1032.2.1|Name=mRNA_C-australica_Contig_1032.2.1|organism=Chrysoparadoxa australica CS_1217|type=polypeptide|length=132bp
MRLVHVTLLAALGGVAAEEAASLTTGGLMDASRVLHEMGSDQAKSFVDEV
LQGCDDDESQGAALCSRAAYFKGVMLRQEASEQAARAKGVDPAGCEPEAP
SAMAVESVLAFRDFFLNYELERKAVHLTDLED back to topmRNA from alignment at C-australica_Contig_1032:1625..2279- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_C-australica_Contig_1032.2.1 ID=mRNA_C-australica_Contig_1032.2.1|Name=mRNA_C-australica_Contig_1032.2.1|organism=Chrysoparadoxa australica CS_1217|type=mRNA|length=655bp|location=Sequence derived from alignment at C-australica_Contig_1032:1625..2279- (Chrysoparadoxa australica CS_1217)
GCCTGGGAGGGGTGGGGGGAATGAGGCTAGTGCATGTCACACTGTTGGCG
GCACTCGGCGGGGTTGCCGCCGAGGAGGCTGCTTCGCTCACTACTGGCGG
GCTGATGGACGCTTCAAGGGTGCTACACGAGATGGGGAGTGACCAGGCCA
AGAGCTTCGTGGACGAGGTCTTGCAGGGCTGTGATGATGGTAAGATTAAG
CCCAGGTGCATTGCCGAGGATACGGAGCTCTGACCCAATATGCTGCAGAT
GAGAGCCAGGGCGCAGCGCTTTGCAGCCGAGCAGCTTACTTCAAGGGGGT
CATGCTCAGACAGGAAGCATCAGAGCAGGCCGCAAGGGCAAAGGGCGTCG
ATCCTGCTGGTTGCGAGCCAGGTGACCTAACTTGTCCCATCTGCCATCCA
TACCAAGCCCTTCCTTACCCATTCTGATTGATCCCTACCACAGAGGCCCC
TTCAGCCATGGCAGTTGAGAGTGTCTTAGCATTTCGCGACTTCTTCCTCA
ACTATGAGTTGGAAAGGAAGGTAAGAGATTGAAAACGCAAGTTAGCTGCT
GGTTTCCTCTCTGTCACTGAATACCCAACCATCCCTGACCTGCTTGTCAC
ATTTTCTCCTGACTGCCAATGCTTGCAGGCAGTTCACCTAACCGACCTGG
AGGAC back to topCoding sequence (CDS) from alignment at C-australica_Contig_1032:1625..2279- >mRNA_C-australica_Contig_1032.2.1 ID=mRNA_C-australica_Contig_1032.2.1|Name=mRNA_C-australica_Contig_1032.2.1|organism=Chrysoparadoxa australica CS_1217|type=CDS|length=396bp|location=Sequence derived from alignment at C-australica_Contig_1032:1625..2279- (Chrysoparadoxa australica CS_1217)
ATGAGGCTAGTGCATGTCACACTGTTGGCGGCACTCGGCGGGGTTGCCGC
CGAGGAGGCTGCTTCGCTCACTACTGGCGGGCTGATGGACGCTTCAAGGG
TGCTACACGAGATGGGGAGTGACCAGGCCAAGAGCTTCGTGGACGAGGTC
TTGCAGGGCTGTGATGATGATGAGAGCCAGGGCGCAGCGCTTTGCAGCCG
AGCAGCTTACTTCAAGGGGGTCATGCTCAGACAGGAAGCATCAGAGCAGG
CCGCAAGGGCAAAGGGCGTCGATCCTGCTGGTTGCGAGCCAGAGGCCCCT
TCAGCCATGGCAGTTGAGAGTGTCTTAGCATTTCGCGACTTCTTCCTCAA
CTATGAGTTGGAAAGGAAGGCAGTTCACCTAACCGACCTGGAGGAC back to top
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