mRNA_C-australica_Contig_10308.1.1 (mRNA) Chrysoparadoxa australica CS_1217
You are viewing an mRNA, more information available on the corresponding polypeptide page
Overview
Homology
BLAST of mRNA_C-australica_Contig_10308.1.1 vs. uniprot
Match: A0A350PD98_9BACT (Four helix bundle protein n=3 Tax=Bacteria TaxID=2 RepID=A0A350PD98_9BACT) HSP 1 Score: 155 bits (391), Expect = 1.960e-46 Identity = 81/120 (67.50%), Postives = 96/120 (80.00%), Query Frame = 1 Query: 1 MANRK-YDLEERLITFSIEIINLSEELPKTYVGIHFAKQITRSGTSPAFQYAEASAAESRKDFIHKLKIGLKELRETFVCLKIIKSKPLVNSEELEWLLKECNELISIFNSSIKTAKKNL 357 M N+ ++L++R+I FS+ I+ + E LPK+Y G HFAKQ+ RSGTSPAFQY EA AAESRKDFIHKLKIG KELRETFVCL IIK PL +SE LE L EC+ELI+IF+ SI TAKKNL Sbjct: 1 MKNKNSFNLQDRIINFSLLIMKIVEGLPKSYTGQHFAKQLVRSGTSPAFQYGEAQAAESRKDFIHKLKIGQKELRETFVCLTIIKKHPLSSSELLEIALTECDELIAIFHKSIGTAKKNL 120
BLAST of mRNA_C-australica_Contig_10308.1.1 vs. uniprot
Match: A0A3D1G8B9_9BACT (Four helix bundle protein n=1 Tax=Balneolaceae bacterium TaxID=2053516 RepID=A0A3D1G8B9_9BACT) HSP 1 Score: 151 bits (381), Expect = 6.130e-45 Identity = 73/119 (61.34%), Postives = 94/119 (78.99%), Query Frame = 1 Query: 1 MANRKYDLEERLITFSIEIINLSEELPKTYVGIHFAKQITRSGTSPAFQYAEASAAESRKDFIHKLKIGLKELRETFVCLKIIKSKPLVNSEELEWLLKECNELISIFNSSIKTAKKNL 357 M NR +DL++RLI FS+ I+ + + LPKTY G HFAKQ+ RSGTSPAFQY EA +AESRKDFIHK+KIG KEL E+++CL+IIK PL+ SE L+ + EC+EL +IF+ SI TA+ NL Sbjct: 1 MKNRNFDLQDRLIKFSLLIMKVVDNLPKTYAGQHFAKQLVRSGTSPAFQYGEAKSAESRKDFIHKVKIGKKELGESYICLQIIKQHPLLESEILDGAINECDELSAIFHKSIATARNNL 119
BLAST of mRNA_C-australica_Contig_10308.1.1 vs. uniprot
Match: UPI000CD7F64E (four helix bundle protein n=1 Tax=Gracilimonas amylolytica TaxID=1749045 RepID=UPI000CD7F64E) HSP 1 Score: 151 bits (381), Expect = 6.730e-45 Identity = 76/118 (64.41%), Postives = 92/118 (77.97%), Query Frame = 1 Query: 4 ANRKYDLEERLITFSIEIINLSEELPKTYVGIHFAKQITRSGTSPAFQYAEASAAESRKDFIHKLKIGLKELRETFVCLKIIKSKPLVNSEELEWLLKECNELISIFNSSIKTAKKNL 357 R YDLE+RLI FSI II+L E+LPK+Y G +FA Q+ RSGTSPAF Y+EA +AESRKDF+HK KI LKELRE+ C+KIIK KPL+ + L+ LL EC ELISIF SI TAK+N+ Sbjct: 6 TKRVYDLEDRLIRFSINIISLIEKLPKSYTGKYFANQLVRSGTSPAFHYSEAKSAESRKDFVHKFKIALKELRESSTCMKIIKRKPLLKDQLLDDLLAECEELISIFVKSISTAKQNM 123
BLAST of mRNA_C-australica_Contig_10308.1.1 vs. uniprot
Match: A0A2D9FZ42_9BACT (Four helix bundle protein n=2 Tax=Balneolaceae TaxID=1813606 RepID=A0A2D9FZ42_9BACT) HSP 1 Score: 150 bits (380), Expect = 9.270e-45 Identity = 73/119 (61.34%), Postives = 93/119 (78.15%), Query Frame = 1 Query: 1 MANRKYDLEERLITFSIEIINLSEELPKTYVGIHFAKQITRSGTSPAFQYAEASAAESRKDFIHKLKIGLKELRETFVCLKIIKSKPLVNSEELEWLLKECNELISIFNSSIKTAKKNL 357 M N+KYDL+ RLI F+I I+ + E LPK Y G HF Q+ RSGT+PAF Y EA AAESRKDF+HK+KIGLKELRE+F+ L IIK KPL+ ++ + L+EC+ELISIF +SI TAK+N+ Sbjct: 1 MKNQKYDLQNRLIKFAILIMEVVEMLPKNYTGRHFKNQLVRSGTAPAFHYGEAQAAESRKDFVHKMKIGLKELRESFIALTIIKEKPLLEDQKADLALRECDELISIFFTSIDTAKRNM 119
BLAST of mRNA_C-australica_Contig_10308.1.1 vs. uniprot
Match: A0A521FGS9_9BACT (Four helix bundle protein n=1 Tax=Gracilimonas mengyeensis TaxID=1302730 RepID=A0A521FGS9_9BACT) HSP 1 Score: 143 bits (360), Expect = 9.330e-42 Identity = 71/119 (59.66%), Postives = 91/119 (76.47%), Query Frame = 1 Query: 1 MANRKYDLEERLITFSIEIINLSEELPKTYVGIHFAKQITRSGTSPAFQYAEASAAESRKDFIHKLKIGLKELRETFVCLKIIKSKPLVNSEELEWLLKECNELISIFNSSIKTAKKNL 357 M +K+DLEERLI F++ + +SE+LPKTY+G H ++Q+ R GTSPAF Y+EA +AESRKDF+HKLKIGLKELRE+ +KII+ KPL+ L LKEC ELISIF SI+T K N+ Sbjct: 1 MNYKKFDLEERLIQFALNTLEVSEKLPKTYIGKHLSQQLVRCGTSPAFHYSEAKSAESRKDFVHKLKIGLKELRESSTNMKIIQRKPLLTDPILNKTLKECEELISIFVKSIQTTKGNM 119
BLAST of mRNA_C-australica_Contig_10308.1.1 vs. uniprot
Match: A0A3F3I3V0_9BACT (Four helix bundle protein n=7 Tax=Bacteroidetes/Chlorobi group TaxID=68336 RepID=A0A3F3I3V0_9BACT) HSP 1 Score: 143 bits (360), Expect = 9.620e-42 Identity = 76/118 (64.41%), Postives = 93/118 (78.81%), Query Frame = 1 Query: 1 MANRKYDLEERLITFSIEIINLSEELPKTYVGIHFAKQITRSGTSPAFQYAEASAAESRKDFIHKLKIGLKELRETFVCLKIIKSKPLVNSEELEWLLKECNELISIFNSSIKTAKKN 354 M R+Y+L+ RLI FSI II +SE+LPK YVG HF+KQ+ RSGTSPAFQ AEA +AES KDFIHKLKIG+KELRET V L+II K L + ++ LKEC+EL++IF SSI+TAK N Sbjct: 1 MKARQYNLQNRLIEFSISIIEVSEKLPKNYVGQHFSKQLIRSGTSPAFQQAEAQSAESSKDFIHKLKIGIKELRETKVNLEIISRKFLPSEVIVQNTLKECDELVAIFYSSIRTAKAN 118
BLAST of mRNA_C-australica_Contig_10308.1.1 vs. uniprot
Match: A0A1F3DRZ6_9BACT (Four helix bundle protein n=1 Tax=Bacteroidetes bacterium GWA2_30_7 TaxID=1797313 RepID=A0A1F3DRZ6_9BACT) HSP 1 Score: 142 bits (357), Expect = 2.750e-41 Identity = 75/115 (65.22%), Postives = 89/115 (77.39%), Query Frame = 1 Query: 13 KYDLEERLITFSIEIINLSEELPKTYVGIHFAKQITRSGTSPAFQYAEASAAESRKDFIHKLKIGLKELRETFVCLKIIKSKPLVN-SEELEWLLKECNELISIFNSSIKTAKKN 354 KYDLEERLI F+I ++ +SE LP T G H A Q+ RSGTSPAF Y EA AAES KDFIHK+ + LKELRET +CLKII KPL+N S++++ LKECNELI+IF SIKTAK N Sbjct: 4 KYDLEERLIRFAIRMLEVSELLPNTKAGNHIAGQLVRSGTSPAFNYGEAQAAESAKDFIHKMGVVLKELRETGICLKIIILKPLINPSDKIKSDLKECNELIAIFTKSIKTAKTN 118
BLAST of mRNA_C-australica_Contig_10308.1.1 vs. uniprot
Match: A0A0B0ECL1_9BACT (Uncharacterized protein n=2 Tax=Candidatus Brocadiales TaxID=1127829 RepID=A0A0B0ECL1_9BACT) HSP 1 Score: 142 bits (357), Expect = 3.110e-41 Identity = 73/121 (60.33%), Postives = 93/121 (76.86%), Query Frame = 1 Query: 10 RKYDLEERLITFSIEIINLSEELPKTYVGIHFAKQITRSGTSPAFQYAEASAAESRKDFIHKLKIGLKELRETFVCLKIIKSKPLVN-SEELEWLLKECNELISIFNSSIKTAKKNLSSIK 369 +KYDLE+RLI F+I II L EELPKT G H A Q+ R GTSPA Y E ++ES+KDFIHK+KI LKELRET +CLKII+ KPL+ S+ + ++KECNELISIF SS++TA+K+ +K Sbjct: 5 KKYDLEDRLIEFAIRIIELVEELPKTRAGNHIAGQLIRCGTSPALNYGEVQSSESQKDFIHKMKIILKELRETNICLKIIERKPLIKQSQRRDKIIKECNELISIFVSSVRTAQKSKERVK 125
BLAST of mRNA_C-australica_Contig_10308.1.1 vs. uniprot
Match: A0A1F3IN57_9BACT (Four helix bundle protein n=1 Tax=Bacteroidetes bacterium GWF2_33_16 TaxID=1797341 RepID=A0A1F3IN57_9BACT) HSP 1 Score: 140 bits (354), Expect = 8.890e-41 Identity = 76/118 (64.41%), Postives = 91/118 (77.12%), Query Frame = 1 Query: 4 ANRKYDLEERLITFSIEIINLSEELPKTYVGIHFAKQITRSGTSPAFQYAEASAAESRKDFIHKLKIGLKELRETFVCLKIIKSKPLVNS-EELEWLLKECNELISIFNSSIKTAKKN 354 +NRKYDLEERLI FS+ II L E LP T VG H Q+ RSGTSPAF Y EA +AES DFIHK+K+ LKELRET + +KIIK KPL+NS E ++ LKEC+ELI+IF SI+TA+KN Sbjct: 5 SNRKYDLEERLIEFSLLIIRLVEMLPDTRVGSHIGGQLLRSGTSPAFNYGEAQSAESINDFIHKMKVCLKELRETKISMKIIKRKPLLNSIEVIDNSLKECDELIAIFVKSIETAQKN 122
BLAST of mRNA_C-australica_Contig_10308.1.1 vs. uniprot
Match: UPI001BC5A397 (Four helix bundle protein n=1 Tax=Ignavibacteriales bacterium TaxID=2049428 RepID=UPI001BC5A397) HSP 1 Score: 140 bits (353), Expect = 1.150e-40 Identity = 79/117 (67.52%), Postives = 88/117 (75.21%), Query Frame = 1 Query: 7 NRKYDLEERLITFSIEIINLSEELPKTYVGIHFAKQITRSGTSPAFQYAEASAAESRKDFIHKLKIGLKELRETFVCLKIIKSKPLVNS-EELEWLLKECNELISIFNSSIKTAKKN 354 NR YDLEERLI F++ II+L E+LP +G H QI RSGTSPA Y EA AAES+ DFIHK+KI LKELRET V LKII KPLVN+ E E LLKEC+ELISIF SI TAKKN Sbjct: 6 NRIYDLEERLIQFALGIISLVEKLPDNKIGNHIGGQILRSGTSPALNYGEAQAAESKTDFIHKMKICLKELRETRVSLKIIIRKPLVNNITEAETLLKECSELISIFAKSIDTAKKN 122 The following BLAST results are available for this feature:
BLAST of mRNA_C-australica_Contig_10308.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-australica_Contig_10308.1.1 >prot_C-australica_Contig_10308.1.1 ID=prot_C-australica_Contig_10308.1.1|Name=mRNA_C-australica_Contig_10308.1.1|organism=Chrysoparadoxa australica CS_1217|type=polypeptide|length=125bp MANRKYDLEERLITFSIEIINLSEELPKTYVGIHFAKQITRSGTSPAFQYback to top mRNA from alignment at C-australica_Contig_10308:133..507+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-australica_Contig_10308.1.1 ID=mRNA_C-australica_Contig_10308.1.1|Name=mRNA_C-australica_Contig_10308.1.1|organism=Chrysoparadoxa australica CS_1217|type=mRNA|length=375bp|location=Sequence derived from alignment at C-australica_Contig_10308:133..507+ (Chrysoparadoxa australica CS_1217)back to top Coding sequence (CDS) from alignment at C-australica_Contig_10308:133..507+ >mRNA_C-australica_Contig_10308.1.1 ID=mRNA_C-australica_Contig_10308.1.1|Name=mRNA_C-australica_Contig_10308.1.1|organism=Chrysoparadoxa australica CS_1217|type=CDS|length=375bp|location=Sequence derived from alignment at C-australica_Contig_10308:133..507+ (Chrysoparadoxa australica CS_1217)back to top |