mRNA_C-australica_Contig_10305.1.1 (mRNA) Chrysoparadoxa australica CS_1217
You are viewing an mRNA, more information available on the corresponding polypeptide page
Overview
Homology
BLAST of mRNA_C-australica_Contig_10305.1.1 vs. uniprot
Match: A0A7V8QI96_9GAMM (Tetratricopeptide repeat protein n=1 Tax=Ectothiorhodospiraceae bacterium WFHF3C12 TaxID=1914406 RepID=A0A7V8QI96_9GAMM) HSP 1 Score: 168 bits (425), Expect = 5.310e-48 Identity = 87/148 (58.78%), Postives = 113/148 (76.35%), Query Frame = 1 Query: 1 KITQALAQVYFDTGRGKAAADVYEKAAAVHPELTHEAAEFHRRAGQLFRALNLNARVRDPKEKMRQRVAILVELERYEQVAGAQASLNRVGLLEDQNIRYALAYSLFKAGKFDAAEAHLSRLTKGDLVRQATQLRQYMQECRSDPWLC 444 ++T LA Y D+G+ AA+++E+AA PEL EAAE HRRA QLFRALNLNARV D ++K++QR+AIL+EL+RYE VAG SL RVGLL+DQN+RYALAY+ FK+G F+ AE HLS+LT +L R+AT LR+ M+EC+ W C Sbjct: 239 RVTVELANAYLDSGQVVTAANLFEQAAVDDPELLSEAAELHRRARQLFRALNLNARVADQRKKLKQRLAILIELKRYELVAGMSGSLYRVGLLDDQNVRYALAYAHFKSGDFEIAEQHLSQLTDSELFRRATALRKAMEECQDARWKC 386
BLAST of mRNA_C-australica_Contig_10305.1.1 vs. uniprot
Match: A0A372BU13_9GAMM (Uncharacterized protein n=2 Tax=unclassified Wenzhouxiangella TaxID=2613841 RepID=A0A372BU13_9GAMM) HSP 1 Score: 151 bits (381), Expect = 1.920e-41 Identity = 74/148 (50.00%), Postives = 110/148 (74.32%), Query Frame = 1 Query: 1 KITQALAQVYFDTGRGKAAADVYEKAAAVHPELTHEAAEFHRRAGQLFRALNLNARVRDPKEKMRQRVAILVELERYEQVAGAQASLNRVGLLEDQNIRYALAYSLFKAGKFDAAEAHLSRLTKGDLVRQATQLRQYMQECRSDPWLC 444 ++ + LAQ + + + AAD+ +AA + P L EAAE +RRAG L +AL LNARV D +K++QR+AI +EL R++Q AG ++ L R GLL +++IRYALAY+LFK G+++ AE+HL+RLT+ DL R+A +LR+ M++CR +PWLC Sbjct: 242 RLARVLAQTWLELDKVLPAADILHEAARLDPALMAEAAELYRRAGWLMQALTLNARVIDQSKKLKQRLAIFIELGRFDQAAGMESDLVRTGLLNEEDIRYALAYALFKTGRYEQAESHLARLTQDDLFRKANELRRAMEQCRDEPWLC 389
BLAST of mRNA_C-australica_Contig_10305.1.1 vs. uniprot
Match: A0A3E1KAS4_9GAMM (Uncharacterized protein n=1 Tax=Wenzhouxiangella sediminis TaxID=1792836 RepID=A0A3E1KAS4_9GAMM) HSP 1 Score: 150 bits (380), Expect = 2.980e-41 Identity = 75/148 (50.68%), Postives = 109/148 (73.65%), Query Frame = 1 Query: 1 KITQALAQVYFDTGRGKAAADVYEKAAAVHPELTHEAAEFHRRAGQLFRALNLNARVRDPKEKMRQRVAILVELERYEQVAGAQASLNRVGLLEDQNIRYALAYSLFKAGKFDAAEAHLSRLTKGDLVRQATQLRQYMQECRSDPWLC 444 ++ + LAQ + D + AAD+ +AA + PEL EAAE +RRAG L +AL LNA+V D +K++QR+AI +EL R++Q AG + L R GLL +++IRYALAY+LFK G+++ AE+HLS LT+ DL R+A +LR+ M++CR +PWLC Sbjct: 247 RLARVLAQTWLDREQVLPAADILHEAARLDPELMAEAAELYRRAGWLMQALTLNAQVIDQAKKLKQRLAIFIELGRFDQAAGMEPDLVRTGLLSEEDIRYALAYALFKTGRYEQAESHLSLLTRNDLFRKANELRRAMEQCRDEPWLC 394
BLAST of mRNA_C-australica_Contig_10305.1.1 vs. uniprot
Match: A0A6B3W5J1_9GAMM (Tetratricopeptide repeat protein n=1 Tax=Wenzhouxiangella sp. XN201 TaxID=2710755 RepID=A0A6B3W5J1_9GAMM) HSP 1 Score: 150 bits (378), Expect = 5.330e-41 Identity = 73/148 (49.32%), Postives = 108/148 (72.97%), Query Frame = 1 Query: 1 KITQALAQVYFDTGRGKAAADVYEKAAAVHPELTHEAAEFHRRAGQLFRALNLNARVRDPKEKMRQRVAILVELERYEQVAGAQASLNRVGLLEDQNIRYALAYSLFKAGKFDAAEAHLSRLTKGDLVRQATQLRQYMQECRSDPWLC 444 ++ + LAQ + D + AAD+ AA + P L EAAE +RRAG L +AL LNARV D +K++QR+A+ +EL R++Q AG ++ L R GLL +++IRYALAY+LFK G+++ AE+HL+RLT+ DL R+A +LR+ M++CR +PW C Sbjct: 242 RLARVLAQTWLDLDKILPAADILHDAARLDPSLMAEAAELYRRAGWLMQALTLNARVIDQPKKLKQRLAVFIELGRFDQAAGMESDLVRTGLLNEEDIRYALAYALFKTGRYEQAESHLTRLTRDDLFRKANELRRAMEQCRDEPWFC 389
BLAST of mRNA_C-australica_Contig_10305.1.1 vs. uniprot
Match: UPI001CA6F16E (tetratricopeptide repeat protein n=1 Tax=Algiphilus sp. NNCM1 TaxID=2834409 RepID=UPI001CA6F16E) HSP 1 Score: 145 bits (367), Expect = 1.880e-39 Identity = 74/143 (51.75%), Postives = 101/143 (70.63%), Query Frame = 1 Query: 16 LAQVYFDTGRGKAAADVYEKAAAVHPELTHEAAEFHRRAGQLFRALNLNARVRDPKEKMRQRVAILVELERYEQVAGAQASLNRVGLLEDQNIRYALAYSLFKAGKFDAAEAHLSRLTKGDLVRQATQLRQYMQECRSDPWLC 444 LA Y +T R AAA ++E+AAA +PELT EA+E +R AG ALNLNAR D ++K +QR+A+LV+LE++EQVA + L RVGL E+ ++RYALAY+ FK G+F+ AE++L+ L+ DL +QAT LR M C PW C Sbjct: 238 LAHTYLETRRTLAAARLFEQAAAFYPELTSEASELYRDAGHTMHALNLNARTADSQKKFKQRLALLVQLEQFEQVAAMERDLKRVGLTEEGSVRYALAYAFFKTGRFEKAESYLAGLSDPDLFKQATNLRSAMSSCEESPWAC 380
BLAST of mRNA_C-australica_Contig_10305.1.1 vs. uniprot
Match: UPI001781C8CC (tetratricopeptide repeat protein n=1 Tax=Pseudomarimonas arenosa TaxID=2774145 RepID=UPI001781C8CC) HSP 1 Score: 145 bits (367), Expect = 1.880e-39 Identity = 76/147 (51.70%), Postives = 102/147 (69.39%), Query Frame = 1 Query: 4 ITQALAQVYFDTGRGKAAADVYEKAAAVHPELTHEAAEFHRRAGQLFRALNLNARVRDPKEKMRQRVAILVELERYEQVAGAQASLNRVGLLEDQNIRYALAYSLFKAGKFDAAEAHLSRLTKGDLVRQATQLRQYMQECRSDPWLC 444 I++ALAQ + + G AAA++ + A L E+AE RRAG RAL LNARV D + K++QRV ILVEL+R+EQVAG ++ L R GLL D+++RYALAY+ F+ G F+A E HLS LT+ DL R+AT+LR+ MQ+C W C Sbjct: 234 ISKALAQTWLEKGNAYAAAEILAEVAERERSLFAESAELFRRAGHPMRALMLNARVEDSERKLKQRVGILVELKRFEQVAGMESELYRAGLLADEDLRYALAYAFFRGGNFEAVERHLSALTRSDLFRKATELRRLMQDCSGQRWTC 380
BLAST of mRNA_C-australica_Contig_10305.1.1 vs. uniprot
Match: A0A5C8A1V3_9RHOO (Tetratricopeptide repeat protein n=2 Tax=Proteobacteria TaxID=1224 RepID=A0A5C8A1V3_9RHOO) HSP 1 Score: 145 bits (365), Expect = 3.570e-39 Identity = 73/148 (49.32%), Postives = 104/148 (70.27%), Query Frame = 1 Query: 4 ITQALAQVYFDTGRGKAAADVYEKAAAVHPELTHEAAEFHRRAGQLFRALNLNARVRDPKEKMRQRVAILVELERYEQVAGAQASLNRVGLLEDQNIRYALAYSLFKAGKFDAAEAHLSRLTKGDLVRQATQLRQYMQECRSDPWLCA 447 I +ALAQ + + G AAA+V A P+L EAAE +RRAG+ +ALNLNARV DP+ K++QRV + + +RY+++ A+ +L R GLL+D+++RYALAY+ +K F A+E HL+ LT+ DL R+AT+LR+ MQEC PW CA Sbjct: 232 IAKALAQTWLEQGNPLAAAEVMAAQAEREPDLLSEAAELYRRAGRTSQALNLNARVTDPQRKLKQRVGLWIAAQRYDELTAAEPALARAGLLDDEDVRYALAYAWYKGRDFAASERHLAALTRSDLFRKATELRRLMQECADTPWTCA 379
BLAST of mRNA_C-australica_Contig_10305.1.1 vs. uniprot
Match: A0A7Y2YDB9_9GAMM (Tetratricopeptide repeat protein n=2 Tax=Xanthomonadales bacterium TaxID=2006849 RepID=A0A7Y2YDB9_9GAMM) HSP 1 Score: 145 bits (365), Expect = 3.710e-39 Identity = 72/147 (48.98%), Postives = 105/147 (71.43%), Query Frame = 1 Query: 4 ITQALAQVYFDTGRGKAAADVYEKAAAVHPELTHEAAEFHRRAGQLFRALNLNARVRDPKEKMRQRVAILVELERYEQVAGAQASLNRVGLLEDQNIRYALAYSLFKAGKFDAAEAHLSRLTKGDLVRQATQLRQYMQECRSDPWLC 444 + + LA VY D + AAAD+ +AA + P L EAAE +RR+GQ +RAL+LN ++ D EK RQR+A+ ++L +EQ A + L RVGLLE++++RYA+AY+LFK+G+FD AE HL+ LT+ DL R+A +LR+ +Q+C D W C Sbjct: 234 VKKVLAHVYLDRNQLTAAADLIYQAALIDPTLLAEAAELYRRSGQAYRALSLNGQLADQPEKFRQRLALYLQLRYFEQAAAMETPLYRVGLLEEEDLRYAIAYALFKSGEFDRAEVHLAELTRPDLFRKAAELRRAIQDCEEDSWKC 380
BLAST of mRNA_C-australica_Contig_10305.1.1 vs. uniprot
Match: A0A6M8VWS9_9PROT (Tetratricopeptide repeat protein n=1 Tax=Proteobacteria bacterium TaxID=1977087 RepID=A0A6M8VWS9_9PROT) HSP 1 Score: 145 bits (365), Expect = 4.510e-39 Identity = 73/148 (49.32%), Postives = 106/148 (71.62%), Query Frame = 1 Query: 1 KITQALAQVYFDTGRGKAAADVYEKAAAVHPELTHEAAEFHRRAGQLFRALNLNARVRDPKEKMRQRVAILVELERYEQVAGAQASLNRVGLLEDQNIRYALAYSLFKAGKFDAAEAHLSRLTKGDLVRQATQLRQYMQECRSDPWLC 444 ++ + LAQ + D + +AA + AA P L EAAE +RRAG L +AL LNA+V D +K++QR+AI +EL R++Q +G + L R GLL+D++IRYALAY+LFK G+++ AEAHL RLT+ DL R+A++LR+ M +C +PWLC Sbjct: 243 RLARVLAQTWIDLDQILSAAGILHDAARRDPSLKAEAAELYRRAGWLMQALTLNAQVIDQAKKLKQRLAIFIELGRFDQASGMERDLIRTGLLDDEDIRYALAYALFKTGRYEQAEAHLGRLTRNDLFRKASELRRAMAQCAEEPWLC 390
BLAST of mRNA_C-australica_Contig_10305.1.1 vs. uniprot
Match: UPI00200366A5 (tetratricopeptide repeat protein n=1 Tax=Lysobacter sp. CAU 1642 TaxID=2933270 RepID=UPI00200366A5) HSP 1 Score: 142 bits (359), Expect = 2.390e-38 Identity = 78/148 (52.70%), Postives = 101/148 (68.24%), Query Frame = 1 Query: 4 ITQALAQVYFDTGRGKAAADVYEKAAAVHPELTHEAAEFHRRAGQLFRALNLNARVRDPKEKMRQRVAILVELERYEQVAGAQASLNRVGLLEDQNIRYALAYSLFKAGKFDAAEAHLSRLTKGDLVRQATQLRQYMQECRSDPWLCA 447 I +ALAQ + + G AAA++ A P L EAAE RRAG RAL LNAR+ D + K++QRV ILVEL R+EQVAG +A+L R GLL D++IRYALAY+ F+ G F+A E HLS L + +L R+AT+LR+ MQ+C W CA Sbjct: 225 IGKALAQTWLEKGNAYAAAEILAIEAEREPALLAEAAELFRRAGHPMRALMLNARISDSERKLKQRVGILVELGRFEQVAGMEAALYRAGLLADEDIRYALAYAHFRGGNFEAVERHLSALKRPELFRKATELRRLMQDCADARWTCA 372 The following BLAST results are available for this feature:
BLAST of mRNA_C-australica_Contig_10305.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-australica_Contig_10305.1.1 >prot_C-australica_Contig_10305.1.1 ID=prot_C-australica_Contig_10305.1.1|Name=mRNA_C-australica_Contig_10305.1.1|organism=Chrysoparadoxa australica CS_1217|type=polypeptide|length=150bp KITQALAQVYFDTGRGKAAADVYEKAAAVHPELTHEAAEFHRRAGQLFRAback to top mRNA from alignment at C-australica_Contig_10305:90..539+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-australica_Contig_10305.1.1 ID=mRNA_C-australica_Contig_10305.1.1|Name=mRNA_C-australica_Contig_10305.1.1|organism=Chrysoparadoxa australica CS_1217|type=mRNA|length=450bp|location=Sequence derived from alignment at C-australica_Contig_10305:90..539+ (Chrysoparadoxa australica CS_1217)back to top Coding sequence (CDS) from alignment at C-australica_Contig_10305:90..539+ >mRNA_C-australica_Contig_10305.1.1 ID=mRNA_C-australica_Contig_10305.1.1|Name=mRNA_C-australica_Contig_10305.1.1|organism=Chrysoparadoxa australica CS_1217|type=CDS|length=450bp|location=Sequence derived from alignment at C-australica_Contig_10305:90..539+ (Chrysoparadoxa australica CS_1217)back to top |