mRNA_C-australica_Contig_10300.1.1 (mRNA) Chrysoparadoxa australica CS_1217
You are viewing an mRNA, more information available on the corresponding polypeptide page
Overview
Homology
BLAST of mRNA_C-australica_Contig_10300.1.1 vs. uniprot
Match: A0A2D4S8F9_9GAMM (Uncharacterized protein n=1 Tax=Salinisphaeraceae bacterium TaxID=2026789 RepID=A0A2D4S8F9_9GAMM) HSP 1 Score: 182 bits (463), Expect = 8.790e-52 Identity = 95/170 (55.88%), Postives = 123/170 (72.35%), Query Frame = 1 Query: 1 LAFVFLELGQGATARGLFKRIRLDGPFSDKALLGLGWSELAPDGEPQDLLLLRRIRCLEDPARLLPDSLPVLRRMPRESCGRPRMFRDRDEFQWEDGGETEEERYRRALRPWLELGARNADDVAVQEALMATGHAFQQLAASQRAETAYAEALDRLLPRRQATRDLLDRL 510 LAF +LE+GQGATAR LF+R+RLDGP+SDKALLGLGW+ELAPDG Q+ + I+C ED ARLLP+ LPVLRR+PR+SCG R FR+ D+F + G ETE ERY+RAL PWLELG RN +AVQE L +A+ ++ A + A Y A+ +L P+RQ +++L Sbjct: 230 LAFGYLEIGQGATARALFQRVRLDGPYSDKALLGLGWAELAPDGGAQERTVTTEIKCREDAARLLPEGLPVLRRIPRKSCGPARRFRETDKFARKKGAETEVERYKRALIPWLELGQRNPQALAVQEGLAMVPYAYSKIGAPRSASKYYQTAIAQLEPQRQQVERTIEQL 399
BLAST of mRNA_C-australica_Contig_10300.1.1 vs. uniprot
Match: UPI0012EC3B24 (tetratricopeptide repeat protein n=1 Tax=Algiphilus aromaticivorans TaxID=382454 RepID=UPI0012EC3B24) HSP 1 Score: 84.0 bits (206), Expect = 1.130e-15 Identity = 62/156 (39.74%), Postives = 87/156 (55.77%), Query Frame = 1 Query: 1 LAFVFLELGQGATARGLFKRIRLDGPFSDKALLGLGWSELAPDGEPQDLLLLRRIRCLEDPARLLPD--SLPVLRRMPRESCGRPRMFRDRDEFQWEDGGETEEERYRRALRPWLELGARNADDVAVQEALMATGHAFQQLAASQRAETAYAEALD 462 L + FL QG TAR LF R+R +GPFS++ALLG+GW+ELAP G QD R+ ++ + D SL VL R +R F+ ++ GE+EEE RAL W EL R+ D AVQE ++A +A +L ++A Y +A+D Sbjct: 390 LGYHFLRAEQGGTARPLFSRVRTEGPFSNRALLGMGWAELAPRGSRQD----RQTLVEDEDSEGFRDVASLGVLIRPGFFEADIYERLANRP-FRRDNLGESEEESLLRALVVWNELVKRDPMDAAVQEGMLAIPYALDRLGDYEQAMQRYQKAID 540
BLAST of mRNA_C-australica_Contig_10300.1.1 vs. uniprot
Match: UPI0012FC0192 (hypothetical protein n=1 Tax=Solimonas soli TaxID=413479 RepID=UPI0012FC0192) HSP 1 Score: 83.6 bits (205), Expect = 1.470e-15 Identity = 65/176 (36.93%), Postives = 93/176 (52.84%), Query Frame = 1 Query: 1 LAFVFLELGQGATARGLFKRIRLDGPFSDKALLGLGWSELAPDG------EPQDLLLLRRIRCLEDPARLLPDSLPVLRR---MPRESCGRPRMFRDRDEFQWEDGGETEEERYRRALRPWLELGARNADDVAVQEALMATGHAFQQLAASQRAETAYAEALDRLLPRRQATRDLL 501 L + FL+ QG TA+ +F R+R++GPFS++ALLGLGWSELAP G +P D + P+++ +L VL R + + R M F+ G E RRAL PWLEL +R+ D AVQEA +A + QL A +A Y +A++ L R+ D + Sbjct: 223 LGWQFLQTQQGGTAKPVFGRVRVEGPFSNRALLGLGWSELAPQGARIQRSDPPD-------DKAQGPSKISFSTLGVLLRPGYLDSDVFDRAGMR----SFRLRSGNPESEAALRRALVPWLELISRDPMDPAVQEAWLAIPYTLDQLGAHTQALQYYEKAVEVLETSRKRMNDAM 387
BLAST of mRNA_C-australica_Contig_10300.1.1 vs. uniprot
Match: A0A522KWK8_9GAMM (Tetratricopeptide repeat protein n=1 Tax=Sinobacteraceae bacterium TaxID=1969813 RepID=A0A522KWK8_9GAMM) HSP 1 Score: 82.8 bits (203), Expect = 2.400e-15 Identity = 63/169 (37.28%), Postives = 92/169 (54.44%), Query Frame = 1 Query: 1 LAFVFLELGQGATARGLFKRIRLDGPFSDKALLGLGWSELAPDGE-----------PQDLLL--LRRIRCLEDPARLLPDSLPVLRRMPRESCGRPRMFRDRDEFQWEDGGETEEERYRRALRPWLELGARNADDVAVQEALMATGHAFQQLAASQRAETAYAEALDRL 468 L F FL QG TA+ LF R+R+ GP+S++ALLGLGW+ELAP GE P+D L L + L +PARL D V +R+ S F+ E + +E+ R+AL PW EL R+ D AVQE ++A A +++ A +A+ Y ++++ L Sbjct: 92 LGFHFLRKQQGGTAKPLFSRVRISGPYSNRALLGLGWAELAPQGEKQKKTAIADPEPEDNPLKGLATLGILINPARLEGD---VYKRVGLRS------------FKLEKVKKEDEDALRKALVPWAELINRDPMDPAVQEGMLAIPFALERIGAHIQAQQFYEKSVELL 245
BLAST of mRNA_C-australica_Contig_10300.1.1 vs. uniprot
Match: A0A3N0VEQ8_9GAMM (Tetratricopeptide repeat protein n=2 Tax=Stagnimonas aquatica TaxID=2689987 RepID=A0A3N0VEQ8_9GAMM) HSP 1 Score: 82.4 bits (202), Expect = 3.870e-15 Identity = 63/169 (37.28%), Postives = 90/169 (53.25%), Query Frame = 1 Query: 1 LAFVFLELGQGATARGLFKRIRLDGPFSDKALLGLGWSELAPDGE-----------PQDLLL--LRRIRCLEDPARLLPDSLPVLRRMPRESCGRPRMFRDRDEFQWEDGGETEEERYRRALRPWLELGARNADDVAVQEALMATGHAFQQLAASQRAETAYAEALDRL 468 L F FL QG TA+ LF R+R+ GP+S++ALLGLGW+ELAP GE P+D L L + L +PARL V +R S F+ E + +EE R+AL PW EL R+ D AVQE ++A A +++ A +A+ Y ++++ L Sbjct: 377 LGFHFLRKQQGGTAKPLFSRVRITGPYSNRALLGLGWAELAPQGEKQKKTDIADPEPEDNPLRGLATLGILINPARL--GDYDVYKRAGLRS------------FKLEKVKKEDEEALRKALVPWAELINRDPMDPAVQEGMLAIPFALERIGAHIQAQQFYEKSVELL 531
BLAST of mRNA_C-australica_Contig_10300.1.1 vs. uniprot
Match: UPI0003A7613E (hypothetical protein n=2 Tax=Solimonas TaxID=413435 RepID=UPI0003A7613E) HSP 1 Score: 80.9 bits (198), Expect = 1.270e-14 Identity = 61/162 (37.65%), Postives = 83/162 (51.23%), Query Frame = 1 Query: 1 LAFVFLELGQGATARGLFKRIRLDGPFSDKALLGLGWSELAPDGEPQDLLLLRRIRCLEDPARLLPDSLPVLRRMPRESCGRPRMFRDRD--------EFQWEDGGETEEERYRRALRPWLELGARNADDVAVQEALMATGHAFQQLAASQRAETAYAEALD 462 L + FL+ QG TA+ + R+R+DGPFS++ALLGLGW+ELAP G RI+ E P P+S RP + DRD F+ G E RRAL W+EL +R+ D AVQEA +A + QL A +A Y +A++ Sbjct: 221 LGWHFLQTQQGGTAKPVLSRVRVDGPFSNRALLGLGWAELAPQGS--------RIQKSETPDDQAPESRTYTSFSTLGVLIRP-GYLDRDVFDRAGMRSFRLRSGNPDSEAALRRALVAWVELISRDPMDPAVQEAWLAIPYTLDQLGAHTQALQYYEKAVE 373
BLAST of mRNA_C-australica_Contig_10300.1.1 vs. uniprot
Match: A0A2D4SCA3_9GAMM (Uncharacterized protein n=1 Tax=Salinisphaeraceae bacterium TaxID=2026789 RepID=A0A2D4SCA3_9GAMM) HSP 1 Score: 79.7 bits (195), Expect = 3.300e-14 Identity = 59/145 (40.69%), Postives = 81/145 (55.86%), Query Frame = 1 Query: 1 LAFVFLELGQGATARGLFKRIRLDGPFSDKALLGLGWSELAPDGEPQDLLLLRRIRCLEDP-ARLLPDSLPVLRRMPRESCG---RPRMFR--DRDEFQWEDGGETEEERYRRALRPWLELGARNADDVAVQEALMATGHAFQQL 417 LA+ FL QGATA+ +F+RIRL GP ++ALLG GWSELAP GE D R+ ++P A + P R +E R FR + F D +T+EE R+AL PW +L ++A D VQEAL++ +A Q+ Sbjct: 401 LAYEFLRSEQGATAKTVFQRIRLQGPHVNQALLGYGWSELAPRGERVD-----RVAVGDEPEAGEYGITEPNQGRFDQEKMSDRLRVDPFRRINLGPFPMADQADTKEEAARQALVPWADLAEKDATDPTVQEALISIPYALDQM 540
BLAST of mRNA_C-australica_Contig_10300.1.1 vs. uniprot
Match: UPI001FEE956E (hypothetical protein n=1 Tax=Flagellatimonas centrodinii TaxID=2806210 RepID=UPI001FEE956E) HSP 1 Score: 79.3 bits (194), Expect = 4.350e-14 Identity = 63/164 (38.41%), Postives = 86/164 (52.44%), Query Frame = 1 Query: 1 LAFVFLELGQGATARGLFKRIRLDGPFSDKALLGLGWSELAPDGEPQDLLLLRRIRCLEDPARLLPDSLPVLRRMPRESCGRPRMFRDRD--------EFQWEDGGETEEERYRRALRPWLELGARNADDVAVQEALMATGHAFQQLAASQRAETAYAEALDRL 468 L + FLE G +A+ +F+RIR++GPFS++ALLGLGW+EL+P GE Q RR +ED P RP F +RD F+ E EEE RRAL W+EL +RN D AVQE +A ++ +L A +A Y A++ L Sbjct: 223 LGWHFLEEKLGGSAKSIFQRIRVEGPFSNRALLGLGWAELSPRGERQ-----RRAADIED-------EDPFSNFSTIGGLLRP-GFLERDVYYRAGFRNFRLVKVAEEEEEGLRRALAAWIELISRNPLDPAVQEGWLAIPYSLDKLGAHTQALQYYERAVEEL 373
BLAST of mRNA_C-australica_Contig_10300.1.1 vs. uniprot
Match: A0A1I2IZ02_9GAMM (Tetratricopeptide repeat-containing protein n=1 Tax=Fontimonas thermophila TaxID=1076937 RepID=A0A1I2IZ02_9GAMM) HSP 1 Score: 78.6 bits (192), Expect = 8.050e-14 Identity = 59/162 (36.42%), Postives = 86/162 (53.09%), Query Frame = 1 Query: 1 LAFVFLELGQGATARGLFKRIRLDGPFSDKALLGLGWSELAPDGEPQDLLLLRRIRCLEDPARLLPDSLPVLRRMPRESCGRPRMFRDRD--------EFQWEDGGETEEERYRRALRPWLELGARNADDVAVQEALMATGHAFQQLAASQRAETAYAEALD 462 L + FL+ QG TA+ + R+RL+GPFS++ALLGLGW+ELAP GE + +++ ++ PD+ P RP F + D F+ + EEE RRAL PW+EL +R+ D AVQEA +A +L A +A Y A++ Sbjct: 220 LGWHFLQSQQGGTAKPILSRVRLEGPFSNRALLGLGWAELAPQGER-----IAKVQVGDEQ----PDASPFTTFSTLGILLRP-GFVEEDIFKRAGMRAFRLRKASKDEEEALRRALVPWVELISRDPMDSAVQEAWLAIAFTLDRLGAYTQALQYYERAVN 371
BLAST of mRNA_C-australica_Contig_10300.1.1 vs. uniprot
Match: A0A346MWG9_9GAMM (Uncharacterized protein n=2 Tax=Solimonas TaxID=413435 RepID=A0A346MWG9_9GAMM) HSP 1 Score: 76.6 bits (187), Expect = 3.760e-13 Identity = 59/159 (37.11%), Postives = 85/159 (53.46%), Query Frame = 1 Query: 1 LAFVFLELGQGATARGLFKRIRLDGPFSDKALLGLGWSELAPDGEPQDLLLLRRIRCLEDPARLLPDS-LPVLRRMPRESCGRPRMFRDRD--EFQWEDGGETEEERYRRALRPWLELGARNADDVAVQEALMATGHAFQQLAASQRAETAYAEALDRL 468 L + FL+ QG TA+ +F R+RL+G FS++ALLGLGW+ELAP GE RR+ + P S L + R +F + F+ + EEE R+AL PW+EL +R+ D AVQEA +A +L A +A Y A+++L Sbjct: 227 LGYWFLQNKQGGTAKPVFSRVRLEGAFSNRALLGLGWAELAPTGEKT-----RRVEVGDQTKEENPFSNFSTLGVLLRPGFLEDDIFTRANLRSFRLSKARKDEEEALRKALVPWVELISRDPMDPAVQEAWLAIPFTLDRLGAHTQALKYYELAIEQL 380 The following BLAST results are available for this feature:
BLAST of mRNA_C-australica_Contig_10300.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-australica_Contig_10300.1.1 >prot_C-australica_Contig_10300.1.1 ID=prot_C-australica_Contig_10300.1.1|Name=mRNA_C-australica_Contig_10300.1.1|organism=Chrysoparadoxa australica CS_1217|type=polypeptide|length=173bp LAFVFLELGQGATARGLFKRIRLDGPFSDKALLGLGWSELAPDGEPQDLLback to top mRNA from alignment at C-australica_Contig_10300:308..826- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-australica_Contig_10300.1.1 ID=mRNA_C-australica_Contig_10300.1.1|Name=mRNA_C-australica_Contig_10300.1.1|organism=Chrysoparadoxa australica CS_1217|type=mRNA|length=519bp|location=Sequence derived from alignment at C-australica_Contig_10300:308..826- (Chrysoparadoxa australica CS_1217)back to top Coding sequence (CDS) from alignment at C-australica_Contig_10300:308..826- >mRNA_C-australica_Contig_10300.1.1 ID=mRNA_C-australica_Contig_10300.1.1|Name=mRNA_C-australica_Contig_10300.1.1|organism=Chrysoparadoxa australica CS_1217|type=CDS|length=519bp|location=Sequence derived from alignment at C-australica_Contig_10300:308..826- (Chrysoparadoxa australica CS_1217)back to top |