Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Stop | 0 |
| Start | 1 |
| Model size | 647 |
| Hectar predicted targeting category | other localisation |
| Exons | 2 |
| Cds size | 495 |
Relationships
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1682586767.9408708-UTR-C-australica_Contig_1030:4639..4782 | 1682586767.9408708-UTR-C-australica_Contig_1030:4639..4782 | Chrysoparadoxa australica CS_1217 | UTR | C-australica_Contig_1030 4640..4782 + |
| 1682586767.9506338-UTR-C-australica_Contig_1030:4868..4877 | 1682586767.9506338-UTR-C-australica_Contig_1030:4868..4877 | Chrysoparadoxa australica CS_1217 | UTR | C-australica_Contig_1030 4869..4877 + |
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1682586767.9589803-CDS-C-australica_Contig_1030:4877..5372 | 1682586767.9589803-CDS-C-australica_Contig_1030:4877..5372 | Chrysoparadoxa australica CS_1217 | CDS | C-australica_Contig_1030 4878..5372 + |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-australica_Contig_1030.4.1 >prot_C-australica_Contig_1030.4.1 ID=prot_C-australica_Contig_1030.4.1|Name=mRNA_C-australica_Contig_1030.4.1|organism=Chrysoparadoxa australica CS_1217|type=polypeptide|length=165bp
MPQGSPPHAPPEEAEESGSESSVRSHPEESPPPQPYGSLEETLNGPSFEP
SSPTTSRGLLPHSPLSLEDSVGSEEEEEVKKPQMSEDPCQSRLCSRQWGS
PLQWLHVKFDAAGEAFYQELARWVVSHKAYTLLLAIAFAGCCSLGFMTFH
IVTAADELWTPQDSK back to topmRNA from alignment at C-australica_Contig_1030:4640..5372+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_C-australica_Contig_1030.4.1 ID=mRNA_C-australica_Contig_1030.4.1|Name=mRNA_C-australica_Contig_1030.4.1|organism=Chrysoparadoxa australica CS_1217|type=mRNA|length=733bp|location=Sequence derived from alignment at C-australica_Contig_1030:4640..5372+ (Chrysoparadoxa australica CS_1217)
GTAATCGACCCAAACACCCTGACACATTCCCCTGCCTTCTCCATTCCATT
CATCACTAGTGTCGGTCTAAAACCTCGGAGGGGAACTTCCTAGCTTTGGA
TCCTCTTTCGAGCAAGAGTTTTGGGCCCAAGGCCGCGGAAGAGGTAAGGA
GGGGCTAGGTCTTCTTAGTCAGCCAGCCCTTCCCTTTCCTCATTTTAGGT
TCCCTTTTTCTTACCCCCACACTTGGTAGGTGAACGGGATGCCTCAAGGC
TCCCCTCCACATGCTCCGCCTGAAGAAGCCGAAGAGTCGGGTTCAGAGAG
CTCAGTTCGCTCTCACCCAGAGGAATCACCCCCCCCTCAGCCATATGGAT
CTTTGGAGGAAACCCTTAACGGCCCTTCCTTTGAACCCTCATCTCCGACG
ACTAGTCGGGGGCTGCTGCCACACTCGCCGCTTTCACTGGAAGATTCGGT
AGGCAGTGAGGAGGAGGAGGAGGTAAAGAAGCCACAAATGAGTGAAGATC
CATGTCAATCACGGCTCTGCTCCAGGCAATGGGGTTCACCTCTGCAGTGG
CTGCATGTGAAGTTTGACGCGGCAGGCGAGGCTTTCTACCAAGAACTTGC
GCGCTGGGTGGTGTCCCATAAGGCGTATACACTACTTCTAGCAATAGCTT
TCGCTGGATGCTGTTCTCTAGGTTTCATGACCTTTCATATCGTGACCGCT
GCGGATGAGCTTTGGACACCTCAAGATAGCAAG back to topCoding sequence (CDS) from alignment at C-australica_Contig_1030:4640..5372+ >mRNA_C-australica_Contig_1030.4.1 ID=mRNA_C-australica_Contig_1030.4.1|Name=mRNA_C-australica_Contig_1030.4.1|organism=Chrysoparadoxa australica CS_1217|type=CDS|length=495bp|location=Sequence derived from alignment at C-australica_Contig_1030:4640..5372+ (Chrysoparadoxa australica CS_1217)
ATGCCTCAAGGCTCCCCTCCACATGCTCCGCCTGAAGAAGCCGAAGAGTC
GGGTTCAGAGAGCTCAGTTCGCTCTCACCCAGAGGAATCACCCCCCCCTC
AGCCATATGGATCTTTGGAGGAAACCCTTAACGGCCCTTCCTTTGAACCC
TCATCTCCGACGACTAGTCGGGGGCTGCTGCCACACTCGCCGCTTTCACT
GGAAGATTCGGTAGGCAGTGAGGAGGAGGAGGAGGTAAAGAAGCCACAAA
TGAGTGAAGATCCATGTCAATCACGGCTCTGCTCCAGGCAATGGGGTTCA
CCTCTGCAGTGGCTGCATGTGAAGTTTGACGCGGCAGGCGAGGCTTTCTA
CCAAGAACTTGCGCGCTGGGTGGTGTCCCATAAGGCGTATACACTACTTC
TAGCAATAGCTTTCGCTGGATGCTGTTCTCTAGGTTTCATGACCTTTCAT
ATCGTGACCGCTGCGGATGAGCTTTGGACACCTCAAGATAGCAAG back to top
|