Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Stop | 0 |
| Start | 0 |
| Model size | 568 |
| Hectar predicted targeting category | other localisation |
| Exons | 5 |
| Cds size | 564 |
Relationships
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1682586765.4607506-CDS-C-australica_Contig_103:16151..16201 | 1682586765.4607506-CDS-C-australica_Contig_103:16151..16201 | Chrysoparadoxa australica CS_1217 | CDS | C-australica_Contig_103 16152..16201 - |
| 1682586765.4722645-CDS-C-australica_Contig_103:16323..16420 | 1682586765.4722645-CDS-C-australica_Contig_103:16323..16420 | Chrysoparadoxa australica CS_1217 | CDS | C-australica_Contig_103 16324..16420 - |
| 1682586765.4849522-CDS-C-australica_Contig_103:16605..16667 | 1682586765.4849522-CDS-C-australica_Contig_103:16605..16667 | Chrysoparadoxa australica CS_1217 | CDS | C-australica_Contig_103 16606..16667 - |
| 1682586765.4943585-CDS-C-australica_Contig_103:16892..16986 | 1682586765.4943585-CDS-C-australica_Contig_103:16892..16986 | Chrysoparadoxa australica CS_1217 | CDS | C-australica_Contig_103 16893..16986 - |
| 1682586765.5038364-CDS-C-australica_Contig_103:17068..17329 | 1682586765.5038364-CDS-C-australica_Contig_103:17068..17329 | Chrysoparadoxa australica CS_1217 | CDS | C-australica_Contig_103 17069..17329 - |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-australica_Contig_103.5.1 >prot_C-australica_Contig_103.5.1 ID=prot_C-australica_Contig_103.5.1|Name=mRNA_C-australica_Contig_103.5.1|organism=Chrysoparadoxa australica CS_1217|type=polypeptide|length=188bp
QSEAREGAASTTGEATRKTSLANGTSQTSQTSKTCRTSGTSKSAERLKAL
GLVGEADELHVMECCKELEQDEGELDGDEVDESCLHEISLELVSHGVGGP
KTVLHVTIDYIQNEHVYYVEPVPNGMHGSPLFLDGVLFAVHWETQAGIPS
DMGLLARHLFREELVANGDCSAPMGGFDTPVGAEALIK back to topmRNA from alignment at C-australica_Contig_103:16150..17329- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_C-australica_Contig_103.5.1 ID=mRNA_C-australica_Contig_103.5.1|Name=mRNA_C-australica_Contig_103.5.1|organism=Chrysoparadoxa australica CS_1217|type=mRNA|length=1180bp|location=Sequence derived from alignment at C-australica_Contig_103:16150..17329- (Chrysoparadoxa australica CS_1217)
CAGAGCGAAGCAAGAGAAGGAGCGGCTAGCACTACAGGAGAAGCTACTCG
CAAGACAAGCCTTGCCAACGGAACAAGTCAAACAAGTCAAACCAGTAAAA
CATGCCGAACCAGTGGAACTAGCAAAAGCGCAGAGAGGCTCAAGGCCCTT
GGATTAGTGGGTGAGGCAGATGAGCTGCATGTGATGGAATGCTGCAAGGA
GCTTGAGCAGGATGAGGGGGAGCTCGATGGTGATGAGGTGGATGAGAGCT
GCCTCCATGAGGTGAGTACGCGTCTAGAGCATTCAAGGAGGAGTTATTCA
GGGGTGATAAAAGAGTACCAACATGCAGCTTGTATTCGCGTAGATCTCAT
TGGAGCTGGTGAGCCATGGTGTGGGCGGGCCAAAGACTGTGCTGCATGTC
ACTATTGACTACATTCAGAACGAGCACGTCTATTACGGTGAGTTGAGTTG
GGGAGCACCACATATTTCCCTAGCCACTTTGACAGCTCCATGCCGCAGCT
TCGTCCATCCACCAAATGACATGTAACAAACAGTTCACTGTTGGTTATGC
TGTGTTTGTGACGGCACCTGCTGACTGATGTCTGACCGATATCATGAACA
CTGATGCGCCCTCAAGCTTCTCTACTACTTGAACCATGCTGATGTGCTGC
CAATGCTTCCAGTGGAGCCGGTCCCCAATGGAATGCACGGCTCCCCACTG
TTTCTGGATGGAGTGCTGTTTGCGGTAAGTCTCTGAGTTCCCATGACACC
GGCATGGCTAGCTGGGGCAAGCCCCTATGCTAGGCAGCTCTAGAGGAGCT
CTGCCGGTGAAAATGAGTGAGGGGACAACAAGAGTGAGCAAAGTGAGAAA
GGCTGTGACCTCAGCAACTTTAAAGTTTTGTTAAAGACCACTGAGCTTTT
CCTGCACAGGTCCATTGGGAGACTCAAGCTGGCATCCCCAGTGATATGGG
TCTGCTGGCTCGTCACCTGTTCAGGGAAGAGCTTGTTGCTAATGGGGACT
GCTCAGGTGAGTTATCGTAATTTATGGCATTTTGCCAGCAGACCAAGCTG
GATAGTGTGGTACGGGCGAAGCCTTCAACCTCTGAACTACTCAGCTGACA
CAGAAACCTCTCCCTTTGTGTGCCACAGCCCCGATGGGAGGTTTTGACAC
ACCAGTCGGCGCTGAGGCTCTGATCAAGAG back to topCoding sequence (CDS) from alignment at C-australica_Contig_103:16150..17329- >mRNA_C-australica_Contig_103.5.1 ID=mRNA_C-australica_Contig_103.5.1|Name=mRNA_C-australica_Contig_103.5.1|organism=Chrysoparadoxa australica CS_1217|type=CDS|length=564bp|location=Sequence derived from alignment at C-australica_Contig_103:16150..17329- (Chrysoparadoxa australica CS_1217)
CAGAGCGAAGCAAGAGAAGGAGCGGCTAGCACTACAGGAGAAGCTACTCG
CAAGACAAGCCTTGCCAACGGAACAAGTCAAACAAGTCAAACCAGTAAAA
CATGCCGAACCAGTGGAACTAGCAAAAGCGCAGAGAGGCTCAAGGCCCTT
GGATTAGTGGGTGAGGCAGATGAGCTGCATGTGATGGAATGCTGCAAGGA
GCTTGAGCAGGATGAGGGGGAGCTCGATGGTGATGAGGTGGATGAGAGCT
GCCTCCATGAGATCTCATTGGAGCTGGTGAGCCATGGTGTGGGCGGGCCA
AAGACTGTGCTGCATGTCACTATTGACTACATTCAGAACGAGCACGTCTA
TTACGTGGAGCCGGTCCCCAATGGAATGCACGGCTCCCCACTGTTTCTGG
ATGGAGTGCTGTTTGCGGTCCATTGGGAGACTCAAGCTGGCATCCCCAGT
GATATGGGTCTGCTGGCTCGTCACCTGTTCAGGGAAGAGCTTGTTGCTAA
TGGGGACTGCTCAGCCCCGATGGGAGGTTTTGACACACCAGTCGGCGCTG
AGGCTCTGATCAAG back to top
|