mRNA_C-australica_Contig_10297.1.1 (mRNA) Chrysoparadoxa australica CS_1217

You are viewing an mRNA, more information available on the corresponding polypeptide page

Homology

BLAST of mRNA_C-australica_Contig_10297.1.1 vs. uniprot
Match: A0A2E2FKZ0_9FLAO (DUF4412 domain-containing protein n=1 Tax=Crocinitomicaceae bacterium TaxID=2026728 RepID=A0A2E2FKZ0_9FLAO)

HSP 1 Score: 80.5 bits (197), Expect = 1.870e-15
Identity = 50/133 (37.59%), Postives = 81/133 (60.90%), Query Frame = 1

Query:   94 GMKTGIYMTEDELDESNPNNDEDEELDIEYLDETMEISGYECKKVIVRSSEGEVIMWVTEEIDFKPEHSQFTKKEVKGFPMKIETEQERGGVKTTVILTVTSVKEKIKKKDPYGLEIPSGYEELTLEQYKARM 492
            G K  I + E+E+++S    ++  +++IEY+DETME+ GYECKK I+++ E E+ ++ TE+I       QF   ++KGFP+  + E      K+ + + VT+ K + +K D    E   GYEE++LE YKA M
Sbjct:   96 GKKIKIALPEEEINKSK---EKAGDINIEYVDETMEVLGYECKKAIIKNGEDEITVFYTEKIPVPSIQEQFN--QLKGFPLYYQME------KSGMTINVTATKVEEEKVDKSEFEDLEGYEEMSLEDYKALM 217

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BLAST of mRNA_C-australica_Contig_10297.1.1 vs. uniprot
Match: A0A7Y7BHT9_9BACT (DUF4412 domain-containing protein n=1 Tax=Cytophagia bacterium TaxID=2026730 RepID=A0A7Y7BHT9_9BACT)

HSP 1 Score: 70.9 bits (172), Expect = 7.340e-12
Identity = 46/142 (32.39%), Postives = 83/142 (58.45%), Query Frame = 1

Query:   58 KEKKGLQLN--EGGGMKTGIYMTEDELDESNPNNDEDEELDIEYLDETMEISGYECKKVIVRSSEGEVIMWVTEEIDFKPEHSQFTKKEVKGFPMKIETEQERGGVKTTVILTVTSVKEKIKKKDPYGLEIPSGYEELTLEQ 477
            K +KGL L   +  GM+  + + +++    N   +E +  ++ + +ET +I GY+CK+  V++   EV +W T +I     ++Q+T   +KG P++I T ++  GV  T+  T TSV +K   +  + L+IP GYEE+T+E+
Sbjct:   76 KAQKGLMLMSIDMMGMRIAVPIPKEDY---NKMQEETKTPEVRFTNETKDILGYKCKQAFVQNEGAEVEIWYTPKIIPANTNTQYTYAAIKGMPLEIHTRED--GV--TMTFTATSVSDKKINESEFSLDIPDGYEEMTMEE 210

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BLAST of mRNA_C-australica_Contig_10297.1.1 vs. uniprot
Match: A0A6N6MAV5_9FLAO (DUF4412 domain-containing protein n=1 Tax=Salibacter halophilus TaxID=1803916 RepID=A0A6N6MAV5_9FLAO)

HSP 1 Score: 63.2 bits (152), Expect = 4.440e-9
Identity = 40/111 (36.04%), Postives = 65/111 (58.56%), Query Frame = 1

Query:  163 EELDIEYLDETMEISGYECKKVIVRSSEGEVIMWVTEEIDFKPEHSQFTKKEVKGFPMKIETEQERGGVKTTVILTVTSVKEKIKKKDPYGLEIPSGYEELTLEQYKARMK 495
            ++  I YLDET EI GYECKKV +   E   I WVT++I    ++     K++KGFP+  E   +  G++    + +T+VK + KK D     +PS YE++++E+ +  M+
Sbjct:  101 QDYQINYLDETKEIVGYECKKVEIIHDENVAIAWVTDKIKANTQNQ--LGKKLKGFPLSYEMSNQ--GME----MILTAVKVEKKKIDDDNFVVPSEYEKISMEEAQQMMQ 203

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BLAST of mRNA_C-australica_Contig_10297.1.1 vs. uniprot
Match: A0A1W9R1P0_9BACT (Uncharacterized protein n=1 Tax=Bacteroidetes bacterium 4484_276 TaxID=1970779 RepID=A0A1W9R1P0_9BACT)

HSP 1 Score: 53.1 bits (126), Expect = 2.510e-5
Identity = 42/131 (32.06%), Postives = 70/131 (53.44%), Query Frame = 1

Query:  112 YMTEDELDESNPNNDEDEELDIEYLDETMEISGYECKKVIVRS--SEGEV----IMWVTEEIDFKPE--HSQFTKKEVKGFPMKIETEQERGGVKTTVILTVTSV-KEKIKKKDPYGLEIPSGYEELTLEQ 477
            +  E   DE     + + E++I++ DET EI+G+ CKK+I+++   +GE+      W TE++D  P    SQ   ++V G  ++ + +  RG     +  T T V K KI  KD     IP GY+++T E+
Sbjct:   96 FAIESSYDEIQKEFEREPEVEIDFTDETKEIAGHNCKKIIIKTINDDGEISNENFAWFTEDLDVGPNLNFSQKIFEDVNGLLLEYQMDMGRG---VMMKFTATEVEKRKIPTKD---FLIPEGYKKVTREE 220

The following BLAST results are available for this feature:

BLAST of mRNA_C-australica_Contig_10297.1.1 vs. uniprot

BLAST of mRNA_C-australica_Contig_10297.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 4

ZOOM

x 1

POSITION

0


Match Name	E-value	Identity	Description
A0A2E2FKZ0_9FLAO	1.870e-15	37.59	DUF4412 domain-containing protein n=1 Tax=Crocinit...	[more]
A0A7Y7BHT9_9BACT	7.340e-12	32.39	DUF4412 domain-containing protein n=1 Tax=Cytophag...	[more]
A0A6N6MAV5_9FLAO	4.440e-9	36.04	DUF4412 domain-containing protein n=1 Tax=Salibact...	[more]
A0A1W9R1P0_9BACT	2.510e-5	32.06	Uncharacterized protein n=1 Tax=Bacteroidetes bact...	[more]

Relationships

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
1682586765.3820562-CDS-C-australica_Contig_10297:308..809	1682586765.3820562-CDS-C-australica_Contig_10297:308..809	Chrysoparadoxa australica CS_1217	CDS	C-australica_Contig_10297 309..809 -

The following UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
1682586765.3927827-UTR-C-australica_Contig_10297:809..824	1682586765.3927827-UTR-C-australica_Contig_10297:809..824	Chrysoparadoxa australica CS_1217	UTR	C-australica_Contig_10297 810..824 -

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
mRNA_C-australica_Contig_10297.1.1	prot_C-australica_Contig_10297.1.1	Chrysoparadoxa australica CS_1217	polypeptide	C-australica_Contig_10297 309..809 -