mRNA_C-australica_Contig_10297.1.1 (mRNA) Chrysoparadoxa australica CS_1217
You are viewing an mRNA, more information available on the corresponding polypeptide page
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Overview
Homology
BLAST of mRNA_C-australica_Contig_10297.1.1 vs. uniprot
Match: A0A2E2FKZ0_9FLAO (DUF4412 domain-containing protein n=1 Tax=Crocinitomicaceae bacterium TaxID=2026728 RepID=A0A2E2FKZ0_9FLAO) HSP 1 Score: 80.5 bits (197), Expect = 1.870e-15 Identity = 50/133 (37.59%), Postives = 81/133 (60.90%), Query Frame = 1 Query: 94 GMKTGIYMTEDELDESNPNNDEDEELDIEYLDETMEISGYECKKVIVRSSEGEVIMWVTEEIDFKPEHSQFTKKEVKGFPMKIETEQERGGVKTTVILTVTSVKEKIKKKDPYGLEIPSGYEELTLEQYKARM 492
G K I + E+E+++S ++ +++IEY+DETME+ GYECKK I+++ E E+ ++ TE+I QF ++KGFP+ + E K+ + + VT+ K + +K D E GYEE++LE YKA M
Sbjct: 96 GKKIKIALPEEEINKSK---EKAGDINIEYVDETMEVLGYECKKAIIKNGEDEITVFYTEKIPVPSIQEQFN--QLKGFPLYYQME------KSGMTINVTATKVEEEKVDKSEFEDLEGYEEMSLEDYKALM 217
BLAST of mRNA_C-australica_Contig_10297.1.1 vs. uniprot
Match: A0A7Y7BHT9_9BACT (DUF4412 domain-containing protein n=1 Tax=Cytophagia bacterium TaxID=2026730 RepID=A0A7Y7BHT9_9BACT) HSP 1 Score: 70.9 bits (172), Expect = 7.340e-12 Identity = 46/142 (32.39%), Postives = 83/142 (58.45%), Query Frame = 1 Query: 58 KEKKGLQLN--EGGGMKTGIYMTEDELDESNPNNDEDEELDIEYLDETMEISGYECKKVIVRSSEGEVIMWVTEEIDFKPEHSQFTKKEVKGFPMKIETEQERGGVKTTVILTVTSVKEKIKKKDPYGLEIPSGYEELTLEQ 477
K +KGL L + GM+ + + +++ N +E + ++ + +ET +I GY+CK+ V++ EV +W T +I ++Q+T +KG P++I T ++ GV T+ T TSV +K + + L+IP GYEE+T+E+
Sbjct: 76 KAQKGLMLMSIDMMGMRIAVPIPKEDY---NKMQEETKTPEVRFTNETKDILGYKCKQAFVQNEGAEVEIWYTPKIIPANTNTQYTYAAIKGMPLEIHTRED--GV--TMTFTATSVSDKKINESEFSLDIPDGYEEMTMEE 210
BLAST of mRNA_C-australica_Contig_10297.1.1 vs. uniprot
Match: A0A6N6MAV5_9FLAO (DUF4412 domain-containing protein n=1 Tax=Salibacter halophilus TaxID=1803916 RepID=A0A6N6MAV5_9FLAO) HSP 1 Score: 63.2 bits (152), Expect = 4.440e-9 Identity = 40/111 (36.04%), Postives = 65/111 (58.56%), Query Frame = 1 Query: 163 EELDIEYLDETMEISGYECKKVIVRSSEGEVIMWVTEEIDFKPEHSQFTKKEVKGFPMKIETEQERGGVKTTVILTVTSVKEKIKKKDPYGLEIPSGYEELTLEQYKARMK 495
++ I YLDET EI GYECKKV + E I WVT++I ++ K++KGFP+ E + G++ + +T+VK + KK D +PS YE++++E+ + M+
Sbjct: 101 QDYQINYLDETKEIVGYECKKVEIIHDENVAIAWVTDKIKANTQNQ--LGKKLKGFPLSYEMSNQ--GME----MILTAVKVEKKKIDDDNFVVPSEYEKISMEEAQQMMQ 203
BLAST of mRNA_C-australica_Contig_10297.1.1 vs. uniprot
Match: A0A1W9R1P0_9BACT (Uncharacterized protein n=1 Tax=Bacteroidetes bacterium 4484_276 TaxID=1970779 RepID=A0A1W9R1P0_9BACT) HSP 1 Score: 53.1 bits (126), Expect = 2.510e-5 Identity = 42/131 (32.06%), Postives = 70/131 (53.44%), Query Frame = 1 Query: 112 YMTEDELDESNPNNDEDEELDIEYLDETMEISGYECKKVIVRS--SEGEV----IMWVTEEIDFKPE--HSQFTKKEVKGFPMKIETEQERGGVKTTVILTVTSV-KEKIKKKDPYGLEIPSGYEELTLEQ 477
+ E DE + + E++I++ DET EI+G+ CKK+I+++ +GE+ W TE++D P SQ ++V G ++ + + RG + T T V K KI KD IP GY+++T E+
Sbjct: 96 FAIESSYDEIQKEFEREPEVEIDFTDETKEIAGHNCKKIIIKTINDDGEISNENFAWFTEDLDVGPNLNFSQKIFEDVNGLLLEYQMDMGRG---VMMKFTATEVEKRKIPTKD---FLIPEGYKKVTREE 220 The following BLAST results are available for this feature:
BLAST of mRNA_C-australica_Contig_10297.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 4 ZOOMx 1POSITION0
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-australica_Contig_10297.1.1 >prot_C-australica_Contig_10297.1.1 ID=prot_C-australica_Contig_10297.1.1|Name=mRNA_C-australica_Contig_10297.1.1|organism=Chrysoparadoxa australica CS_1217|type=polypeptide|length=167bp MSTPFYISETRYNAKEKKGLQLNEGGGMKTGIYMTEDELDESNPNNDEDEback to top mRNA from alignment at C-australica_Contig_10297:309..824- Legend: UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-australica_Contig_10297.1.1 ID=mRNA_C-australica_Contig_10297.1.1|Name=mRNA_C-australica_Contig_10297.1.1|organism=Chrysoparadoxa australica CS_1217|type=mRNA|length=516bp|location=Sequence derived from alignment at C-australica_Contig_10297:309..824- (Chrysoparadoxa australica CS_1217)back to top Coding sequence (CDS) from alignment at C-australica_Contig_10297:309..824- >mRNA_C-australica_Contig_10297.1.1 ID=mRNA_C-australica_Contig_10297.1.1|Name=mRNA_C-australica_Contig_10297.1.1|organism=Chrysoparadoxa australica CS_1217|type=CDS|length=501bp|location=Sequence derived from alignment at C-australica_Contig_10297:309..824- (Chrysoparadoxa australica CS_1217)back to top |