mRNA_C-australica_Contig_10288.1.1 (mRNA) Chrysoparadoxa australica CS_1217
You are viewing an mRNA, more information available on the corresponding polypeptide page
Overview
Homology
BLAST of mRNA_C-australica_Contig_10288.1.1 vs. uniprot
Match: UPI0003B77772 (GDYXXLXY domain-containing protein n=1 Tax=Oceanicaulis alexandrii TaxID=153233 RepID=UPI0003B77772) HSP 1 Score: 432 bits (1112), Expect = 2.170e-152 Identity = 217/245 (88.57%), Postives = 227/245 (92.65%), Query Frame = 1 Query: 1 MIKVTFLARAAIGLAVILLGLGWMALTHDTGRSAGREVILQTNPVDPRDVFFGHYAILNYRDFGDRDVSLPWQDPRGFQNGETVYVALNPSDLFATPGAVFATLEEATATGAPILKAELVEAYAPEGEEPEVFRIRFDLPGQYFADPETAIALQTDFQTANTMQGRRDRWETCRNLQQTAPDQFEQSWMCEDFDPADEPRADIHEYGVILSVSDRGEAVIKGLYLDGQRLYDSLTGPRLTLERDA 735 MIKV+FLARAAIGLAVIL GLGWM LTH+T RS+GREVILQTNPVDPRDVFFGHYAILNYRDFGDRDVS+P +DPR FQ GETVYVALNPS+LFA PGAVFAT E A A GAP LKAELVEAYAPEGEEPEVF +RFDLP QYFADPETAIALQTDFQTAN MQGRRDRWETCR+LQQTAPD+FEQSWMCEDFD ADEPRADI EYGVILSVS+ GEAVIKGLYLDGQRLYDSLTGPRLTLERDA Sbjct: 1 MIKVSFLARAAIGLAVILGGLGWMTLTHETARSSGREVILQTNPVDPRDVFFGHYAILNYRDFGDRDVSVPRRDPRDFQTGETVYVALNPSELFAMPGAVFATREAAAAAGAPFLKAELVEAYAPEGEEPEVFWVRFDLPSQYFADPETAIALQTDFQTANAMQGRRDRWETCRDLQQTAPDRFEQSWMCEDFDLADEPRADIPEYGVILSVSETGEAVIKGLYLDGQRLYDSLTGPRLTLERDA 245
BLAST of mRNA_C-australica_Contig_10288.1.1 vs. uniprot
Match: A3UHX3_9PROT (Uncharacterized protein n=2 Tax=unclassified Oceanicaulis TaxID=2632123 RepID=A3UHX3_9PROT) HSP 1 Score: 317 bits (811), Expect = 1.460e-106 Identity = 158/244 (64.75%), Postives = 187/244 (76.64%), Query Frame = 1 Query: 1 MIKVTFLARAAIGLAVILLGLGWMALTHDTGRSAGREVILQTNPVDPRDVFFGHYAILNYRDFGDRDVSLPWQDPRGFQNGETVYVALNPSDLFATPGAVFATLEEATATGAPILKAELVEAYAPEGEEPEVFRIRFDLPGQYFADPETAIALQTDFQTANTMQGRRDRWETCRNLQQTAPDQFEQSWMCEDFDPADEPRADIHEYGVILSVSDRGEAVIKGLYLDGQRLYDSLTGPRLTLERD 732 MI +++LARA +GLAVIL LGWM + H+ RS+G EV+LQT P+DPRDVFFGHYA+L+YRDFG DV L W +G + G+TVY AL P+ F PG FA+ EEA + G P+LKA L Y PEGE P+V+ RFDLP QYFADPETA+ALQ DFQTA MQG+RD WE CR+LQQ+ P+ FEQ+W C D D ADEP ADI EYGVILSVSD GEAVIKGLYLDG+R+ D+LTGPRL ERD Sbjct: 1 MIGMSYLARAGLGLAVILAFLGWMTVRHEQARSSGIEVVLQTYPIDPRDVFFGHYAVLSYRDFGTSDVPLGWPLEQGLEPGDTVYFALTPAGEFHQPGEAFASPEEALSQGGPVLKAYLHTPYVPEGETPDVYFARFDLPRQYFADPETALALQDDFQTATQMQGQRDNWEHCRDLQQSDPEGFEQAWRCGDIDLADEPTADIPEYGVILSVSDTGEAVIKGLYLDGERVIDTLTGPRLVRERD 244
BLAST of mRNA_C-australica_Contig_10288.1.1 vs. uniprot
Match: A0A8J6LXV0_9PROT (GDYXXLXY domain-containing protein n=2 Tax=Euryhalocaulis TaxID=1712422 RepID=A0A8J6LXV0_9PROT) HSP 1 Score: 79.0 bits (193), Expect = 2.280e-14 Identity = 54/161 (33.54%), Postives = 84/161 (52.17%), Query Frame = 1 Query: 16 FLARAAIGLAVILLGLGWMALTHDT---GRSAGREVILQTNPVDPRDVFFGHYAILNYRDFGDRDVSLPWQDPRGFQNGETVYVALNPSDLFATPGAVFATLEEATATGAPILKAELVEAYAPEGEEPE-------VFRIRFDLPGQYFADPETAIALQTD 468 FL A I + V G++A+T R+ G E++L+ PVDPRD+ GHY L+Y D+S D F++G+++++ L P D A P A++ + G IL+ + A ++PE RFDLP +Y+AD ETA+AL+T+ Sbjct: 4 FLRSALIAILVT----GFLAVTAGRQIMARNGGEELVLEAAPVDPRDILLGHYVALSYA-IERLDLSALEGDD-AFESGDSLFLELTPEDGAARPAAIYKSWP--AQPGGVILEGRAITAARASTQDPEGVPGSGRFLIARFDLPRRYYADAETALALETE 156
BLAST of mRNA_C-australica_Contig_10288.1.1 vs. uniprot
Match: A0A166UL27_9CYAN (Uncharacterized protein n=1 Tax=Leptolyngbya valderiana BDU 20041 TaxID=322866 RepID=A0A166UL27_9CYAN) HSP 1 Score: 61.6 bits (148), Expect = 6.210e-8 Identity = 50/169 (29.59%), Postives = 80/169 (47.34%), Query Frame = 1 Query: 19 LARAAIGLAVILLGLGWMALTHDTGRSAGREVILQTNPVDPRDVFFGHYAILNYRDFGDRDVSLPWQDPRGFQNGETVYVALNPSDLFATPGAVFATLEEATATGAPILK--------------AELVEAYAP-------EGEEPEVFRIRFDLPGQYFADPETAIALQ 462 L A+ + V+L G M H R+ G+E++L+ PVDPRD+ GHY I++ +L D G++ G V+VAL GA+ AT P ++ AE +E +P EG + +V R+R++L +Y+A P+ A+AL+ Sbjct: 7 LCAVALAMTVVLAG---MVGLHAANRAGGQEILLEMEPVDPRDLLLGHYVIIDTSLHRLDTAALAGPDT-GWRRGRPVFVALEAGG----DGAMHATGAFRAPPEPPFIRGRIAHVSTQFDHAPAEPLEDGSPGLRRDPVEGSQRDVLRVRYNLE-RYYASPDQALALE 166
BLAST of mRNA_C-australica_Contig_10288.1.1 vs. uniprot
Match: UPI000845D5C5 (GDYXXLXY domain-containing protein n=1 Tax=Neptunicoccus sediminis TaxID=1892596 RepID=UPI000845D5C5) HSP 1 Score: 60.5 bits (145), Expect = 1.210e-7 Identity = 60/210 (28.57%), Postives = 83/210 (39.52%), Query Frame = 1 Query: 88 TGRSAGREVILQTNPVDPRDVFFGHYAILNY------RDFGDRDVSLPWQDPRGFQNGETVYVALNPSDLFATPGAVFATLEEATATGAPILKAELVEAYAPEGEEPEVFRIRFDLPGQYFADPETAIALQTDFQTANTMQGRRDRWETCRNLQQTAPDQFEQSWMCEDFDPADEPRADIHEYGVILSVSDRGEAVIKGLYLDGQRLYDS 699 T +GREV+L+T +DPRD+F GHY LN RD W DP VY AL+ + FA ++ T E P+L A RI F ++FA + A+ L E+ R Q + GVILSV+D G A+IKGL ++GQ++YD+ Sbjct: 30 TALQSGREVLLETGFIDPRDLFRGHYTALNLNISQIPRDSVTLHGRFTWNDP--------VYAALDTTGPFAQVQSLHDTYPEDF--NGPVLAGR---AQFQSSASDNTLRIAFPFD-RFFAPKDRALEL-----------------ESLRREQ---------------------------KLGVILSVADDGSALIKGLTIEGQKIYDA 181
BLAST of mRNA_C-australica_Contig_10288.1.1 vs. uniprot
Match: A0A0X3U3U3_9GAMM (Uncharacterized protein n=1 Tax=Microbulbifer sp. ZGT114 TaxID=1685377 RepID=A0A0X3U3U3_9GAMM) HSP 1 Score: 60.1 bits (144), Expect = 1.480e-7 Identity = 51/153 (33.33%), Postives = 80/153 (52.29%), Query Frame = 1 Query: 19 LARAAIGLAVILLGLGWMALTHDTGRSAGREVILQTNPVDPRDVFFGHYAILNYRDFGDRDVSLPWQDPRGFQNGETVYVALNPSD--LFATPGAVFATLEEATATGAPILKAELV-EAYAPEGEEPEVFRIRFDLPGQYFADPETAIALQTD 468 LA A + ++L+G M +T G+E+ ++T PVDPR +F G+YA L Y F + D + QD R +NGE VYV+L P L+ GA E+ L+ + + + EG V+RIR+ + +FA E A+AL+++ Sbjct: 12 LAAALLFQFLVLIG---MVVTAQVPLWTGQEIRIETIPVDPRSLFRGNYARLQYA-FSELDTGVFGQD-RPLRNGEVVYVSLTPDKQGLYRFAGASLQEPEDGV-----FLRGRVSGQWWRREGN---VYRIRYGIEA-FFAPKERALALESE 150
BLAST of mRNA_C-australica_Contig_10288.1.1 vs. uniprot
Match: UPI00166CA819 (GDYXXLXY domain-containing protein n=1 Tax=Amylibacter cionae TaxID=2035344 RepID=UPI00166CA819) HSP 1 Score: 59.7 bits (143), Expect = 2.290e-7 Identity = 45/131 (34.35%), Postives = 65/131 (49.62%), Query Frame = 1 Query: 88 TGRSAGREVILQTNPVDPRDVFFGHYAILNY------RDFGDRDVSLPWQDPRGFQNGETVYVALNPSDLFATPGAVFATLEEATATGAPILKAELVEAYAPEGEEPEVFRIRFDLPGQYFADPETAIALQ 462 T +G+EV+L+T +DPRD+F GHYA+LN R+ + S W DP VYVAL+ S FA P ++ T T P++K A G + + RI F ++FA E A+ L+ Sbjct: 30 TTLQSGQEVLLETGFIDPRDLFRGHYAVLNLQISRIDRNSVSVNGSFTWNDP--------VYVALDTSGPFAQPVSLHDTYP--TDFDGPVIKGN---ALFTSGSDSQTLRIDFPFD-RFFAPQERALELE 146
BLAST of mRNA_C-australica_Contig_10288.1.1 vs. uniprot
Match: A0A0E3P404_9EURY (Uncharacterized protein n=3 Tax=Methanosarcina siciliae TaxID=38027 RepID=A0A0E3P404_9EURY) HSP 1 Score: 55.1 bits (131), Expect = 1.120e-5 Identity = 27/69 (39.13%), Postives = 42/69 (60.87%), Query Frame = 1 Query: 103 GREVILQTNPVDPRDVFFGHYAILNYRDFGDRDVSLPWQDPRGFQNGETVYVALNPSDLFATPGAVFAT 309 G+E++L+T PVDPRD+F G Y ILNY + D+ + R F+ + VY+AL D + P +++T Sbjct: 32 GKEILLKTEPVDPRDLFRGDYVILNY-EISILDLEKIPAEDRHFEYNDRVYLALAVEDGYGVPKKIYST 99
BLAST of mRNA_C-australica_Contig_10288.1.1 vs. uniprot
Match: A0A4Q2LX91_9BACL (Uncharacterized protein n=1 Tax=Paenibacillaceae bacterium TaxID=2003592 RepID=A0A4Q2LX91_9BACL) HSP 1 Score: 54.3 bits (129), Expect = 1.670e-5 Identity = 33/80 (41.25%), Postives = 46/80 (57.50%), Query Frame = 1 Query: 46 VILLGLGWMALTHDTGRSAGREVILQTNPVDPRDVFFGHYAILNYRDFGDRDVSLP---WQDPRGFQNGETVYVALNPSD 276 ++LLGL AL++ G+E+ L+T PVDPRD+F+G Y +L+Y LP WQD R GE VYV L ++ Sbjct: 20 IVLLGL---ALSNTAIERFGKEIRLETAPVDPRDLFYGDYVVLHYA-----ISQLPREMWQDDRLPVEGERVYVRLRAAE 91
BLAST of mRNA_C-australica_Contig_10288.1.1 vs. uniprot
Match: UPI001CD360C4 (GDYXXLXY domain-containing protein n=2 Tax=unclassified Alkalihalobacillus TaxID=2675276 RepID=UPI001CD360C4) HSP 1 Score: 53.9 bits (128), Expect = 2.060e-5 Identity = 32/78 (41.03%), Postives = 43/78 (55.13%), Query Frame = 1 Query: 40 LAVILLGLGWMALTHDTGRSAGREVILQTNPVDPRDVFFGHYAILNYRDFGDRDVSLPWQDPRGFQNGETVYVALNPS 273 +A+ +L L +A TH G +VIL+T P+DPRD+F+G Y LNY D + L D G E VYV L+ S Sbjct: 10 IALQVLSLIGIAATHYMTLKFGEQVILKTEPIDPRDIFYGDYVTLNY-DISTLSLDLLHDD--GIDERERVYVILHKS 84 The following BLAST results are available for this feature:
BLAST of mRNA_C-australica_Contig_10288.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 19 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-australica_Contig_10288.1.1 >prot_C-australica_Contig_10288.1.1 ID=prot_C-australica_Contig_10288.1.1|Name=mRNA_C-australica_Contig_10288.1.1|organism=Chrysoparadoxa australica CS_1217|type=polypeptide|length=246bp MIKVTFLARAAIGLAVILLGLGWMALTHDTGRSAGREVILQTNPVDPRDVback to top mRNA from alignment at C-australica_Contig_10288:91..828- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-australica_Contig_10288.1.1 ID=mRNA_C-australica_Contig_10288.1.1|Name=mRNA_C-australica_Contig_10288.1.1|organism=Chrysoparadoxa australica CS_1217|type=mRNA|length=738bp|location=Sequence derived from alignment at C-australica_Contig_10288:91..828- (Chrysoparadoxa australica CS_1217)back to top Coding sequence (CDS) from alignment at C-australica_Contig_10288:91..828- >mRNA_C-australica_Contig_10288.1.1 ID=mRNA_C-australica_Contig_10288.1.1|Name=mRNA_C-australica_Contig_10288.1.1|organism=Chrysoparadoxa australica CS_1217|type=CDS|length=738bp|location=Sequence derived from alignment at C-australica_Contig_10288:91..828- (Chrysoparadoxa australica CS_1217)back to top |