mRNA_C-australica_Contig_10285.1.1 (mRNA) Chrysoparadoxa australica CS_1217

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_C-australica_Contig_10285.1.1
Unique NamemRNA_C-australica_Contig_10285.1.1
TypemRNA
OrganismChrysoparadoxa australica CS_1217 (Chrysoparadoxa australica CS_1217)
Homology
BLAST of mRNA_C-australica_Contig_10285.1.1 vs. uniprot
Match: A0A2E3XSH8_9PROT (2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase n=1 Tax=Halobacteriovoraceae bacterium TaxID=2026745 RepID=A0A2E3XSH8_9PROT)

HSP 1 Score: 330 bits (845), Expect = 2.020e-106
Identity = 153/265 (57.74%), Postives = 202/265 (76.23%), Query Frame = 1
Query:   13 GFDERAQSYHALGFMKATQKPAVLLCTSGTAVANFLPAIIEAEKTHLPLVVVSADRPSELNAADANQTINQIEVLRNYTKGFWNTSEPQETYPPSALAGKISFLLGQALQDPTGPVHINVPLREPLDHGPVDMKEDWVNEIKRIMRLEGPSLGIPQTTKRVANEDIEKLFEDIKNSQRPLLVFGPLSGTQDYDKKKVKAFINEYKGSFSCDITSGLKYTFGSNEGLIPTLDHPEVLNQLEKSSPDLVVHFGHRLTSKHYYGFLKK 807
            GFDERAQS+ ALGF++   + A L+CTSGTAVANFLPA+IEAEK+ +PL+V+SADRP ELNA DANQTI+Q EVLR+Y K +W  SEPQ  +PP AL+GK+S L    L  P GP+HIN+PLREPLDH PV M + W +EI  I++ E  SL      KR+   ++ +L++ ++NSQRP ++FGP+       ++ +  F+  YKGSFSCD+T+GLKY +GS +GLIPTLDHPEVL +LE+++PDL++HFGHRLTSKHYY FL++
Sbjct:   62 GFDERAQSFRALGFIRTHSQAAALVCTSGTAVANFLPAVIEAEKSRIPLIVLSADRPGELNAIDANQTIDQTEVLRDYCKHYWMCSEPQSDFPPRALSGKLSQLTHSTLSSPKGPMHINIPLREPLDHSPVAMDQKWKDEIFHILKKERASLENALLEKRIPKAELSELYQALENSQRPFIIFGPMDEEASLWEEDLGEFLESYKGSFSCDVTTGLKYKYGSEKGLIPTLDHPEVLAELERTNPDLIIHFGHRLTSKHYYKFLER 326          
BLAST of mRNA_C-australica_Contig_10285.1.1 vs. uniprot
Match: A0A849T1T3_9PROT (2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase n=1 Tax=Bacteriovoracaceae bacterium TaxID=2081706 RepID=A0A849T1T3_9PROT)

HSP 1 Score: 214 bits (546), Expect = 3.140e-62
Identity = 113/263 (42.97%), Postives = 161/263 (61.22%), Query Frame = 1
Query:   19 DERAQSYHALGFMKATQKPAVLLCTSGTAVANFLPAIIEAEKTHLPLVVVSADRPSELNAADANQTINQIEVLRNYTKGFWNTSEPQETYPPSALAGKISFLLGQALQDPTGPVHINVPLREPLDHGPVDMKEDWVNEIKRIMRLEGPSLGIPQTTKRVANEDIEKLFEDIKNSQRPLLVFGPLSGTQDYDKKKVKAFINEYKGSFSCDITSGLKYTFGSNEGLIPTLDHPEVLNQLEKSSPDLVVHFGHRLTSKHYYGFLKK 807
            DER  +Y A+GF KAT KPAV++CTSGTA+AN++PAI+EA+K++LPL+++SADRP EL   D NQTI+Q +   ++ +G  N   P E   P AL   +S L+ ++L    GPVH N   REPL+   V +KED++   +  +  +GPS    +       + ++++ E I NS+  LLV G L+  +  D   ++ FI         D++S LKY F   +G +PT DHPE  + L K+ P+ V H G RLTSKHYY FLKK
Sbjct:   62 DERGAAYRAIGFTKATGKPAVIVCTSGTAMANYMPAIVEAKKSNLPLIILSADRPPELTFCDDNQTIDQTKFFGDFIQGEMNLGAPSEEISPLALTSSLSNLIHKSLFPQKGPVHFNCAFREPLEDTKVFVKEDYIELARNQINRKGPSTKYIELETSPNLDALKEVAEQILNSKSGLLVIGSLAPYESLDT--LREFIKTLNWPTYYDVSSSLKYEFNLEDGALPTFDHPEFQDMLIKNPPETVFHIGGRLTSKHYYSFLKK 322          
BLAST of mRNA_C-australica_Contig_10285.1.1 vs. uniprot
Match: A0A2H0Q5C7_9PROT (2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase n=1 Tax=Bdellovibrionales bacterium CG11_big_fil_rev_8_21_14_0_20_38_13 TaxID=1973928 RepID=A0A2H0Q5C7_9PROT)

HSP 1 Score: 214 bits (544), Expect = 5.600e-62
Identity = 114/268 (42.54%), Postives = 161/268 (60.07%), Query Frame = 1
Query:    4 IHEGFDERAQSYHALGFMKATQKPAVLLCTSGTAVANFLPAIIEAEKTHLPLVVVSADRPSELNAADANQTINQIEVLRNYTKGFWNTSEPQETYPPSALAGKISFLLGQALQDPTGPVHINVPLREPLDHGPVDMKEDWVNEIKRIMRLEGPSLGIPQTTKRVANEDIEKLFEDIKNSQRPLLVFGPLSGTQDYD-KKKVKAFINEYKGSFSCDITSGLKYTFGSNEGLIPTLDHPEVLNQLEKSSPDLVVHFGHRLTSKHYYGFLK 804
            +H G DER  SY ALG+ K + KPA+L+CTSGTA ANF PA+IEA K+ +PL+V+SADRP EL+ +DANQ+INQ  +   + K F +   P +     A+A   +F    A++ P GPVHIN+  REPLD    ++   ++ + K I+  E PS  +         +DI  +   ++ S++PL+V G LS     D + ++   +       + D+TS LK+ F   +GLIPT DHPEV     ++ PDLV+H G RLTSKHYY FLK
Sbjct:   53 LHVGMDERGLSYQALGYAKTSGKPAILVCTSGTAAANFYPAVIEASKSQVPLIVLSADRPLELSQSDANQSINQKNLYGQHCKHFLDLGSPNDDMNLKAIARMTAFAWEMAIKRPFGPVHINIAFREPLDGKETNLDSKYIQDAKTIVDQESPSRQLLGHLL----QDISPILPFLQKSKKPLIVVGELSLCDVKDARSELIESLRSCPYPLNVDVTSSLKFDFSLEDGLIPTFDHPEVYEYFHQNPPDLVLHIGGRLTSKHYYRFLK 316          
BLAST of mRNA_C-australica_Contig_10285.1.1 vs. uniprot
Match: A0A1Y5F9U8_9PROT (2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase n=1 Tax=Halobacteriovorax marinus TaxID=97084 RepID=A0A1Y5F9U8_9PROT)

HSP 1 Score: 209 bits (533), Expect = 2.050e-60
Identity = 109/271 (40.22%), Postives = 169/271 (62.36%), Query Frame = 1
Query:    1 TIHEGFDERAQSYHALGFMKATQKPAVLLCTSGTAVANFLPAIIEAEKTHLPLVVVSADRPSELNAADANQTINQIEVLRNYTKGFWNTSEPQETYPPSALAGKISFLLGQALQDPTGPVHINVPLREPLDHGPVDMKEDWVNEIKRIMR--LEGPSLGIPQTTKRVANEDIEKLFEDIKNSQRPLLVFGPLSGTQDYDKKKVKAFINEYKGSFSCDITSGLKYTFGSNEGLIPTLDHPEVLNQLEKSSPDLVVHFGHRLTSKHYYGFLKK 807
             ++ G DERAQ+Y ALG  K T + + L+CTSGTA+AN++PAIIEA+K+ +P+VV+SADRP EL+ +DANQTINQ+     + +       P E   P  +   ++ L+ ++L    GPVH+N+PLREPLD     + E ++   +   +  L+   L   Q+   +++E ++K+ + +K+S+R LLV G L  + D  K K+KAFI +       DI+S LKY++   + +IPT DH EV +++ ++ P  ++H G R TSKHYY FL +
Sbjct:   49 NLYLGIDERAQAYRALGNAKGTGRTSALICTSGTALANYMPAIIEAKKSFIPMVVLSADRPIELSTSDANQTINQVHFYGAHVRADACLGAPTEQIEPHIVRNTVNHLIFRSLYPTKGPVHLNIPLREPLDSTKAPISESYIERARETFKILLQTEYLAPLQS---LSSEVVDKISDIVKHSERGLLVIGQLPSSMD--KSKIKAFIKKLNWPVFLDISSSLKYSYSLEDNVIPTFDHQEVYDKVLENIPSTIIHLGGRTTSKHYYRFLSE 314          
BLAST of mRNA_C-australica_Contig_10285.1.1 vs. uniprot
Match: T0SW58_9PROT (2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase n=1 Tax=Bacteriovorax sp. BSW11_IV TaxID=1353529 RepID=T0SW58_9PROT)

HSP 1 Score: 205 bits (521), Expect = 1.200e-58
Identity = 106/269 (39.41%), Postives = 154/269 (57.25%), Query Frame = 1
Query:    1 TIHEGFDERAQSYHALGFMKATQKPAVLLCTSGTAVANFLPAIIEAEKTHLPLVVVSADRPSELNAADANQTINQIEVLRNYTKGFWNTSEPQETYPPSALAGKISFLLGQALQDPTGPVHINVPLREPLDHGPVDMKEDWVNEIKRIMRLEGPSLGIPQTTKRVANEDIEKLFEDIKNSQRPLLVFGPLSGTQDYDKKKVKAFINEYKGSFSCDITSGLKYTFGSNEGLIPTLDHPEVLNQLEKSSPDLVVHFGHRLTSKHYYGFLKK 807
            T+ EG DERA SY ALG  KA  KP  L+CTSGTA+AN++PA+IEA ++++PLV++S+DRP EL  +DANQTINQ  +  ++  G  N + P E +   +LA  IS LL        GPVHIN P REPLD+    + +  + E KR     GP+          + E +  L     +++RP +V G    T + +   +  F+         D++S +KY F      +P++DHPEV    +++ PD++ HFG RLT KHYY +L +
Sbjct:   50 TLIEGMDERAASYRALGAAKALGKPVALVCTSGTAMANYMPAVIEARRSNIPLVIISSDRPKELAISDANQTINQENLYGDFVTGSLNLNAPNEHFGLKSLATSISHLLKSTWFPEKGPVHINAPFREPLDNKTAPIADKMIEEAKRYFTQRGPATNYNSVVIAPSTEVLADLANTFNSAKRPFVVVGK---TLENEIDAITEFLQYTNAWTFIDVSSSIKYHFPLRRQAVPSMDHPEVYEYFKQNPPDVIFHFGGRLTGKHYYRYLSE 315          
BLAST of mRNA_C-australica_Contig_10285.1.1 vs. uniprot
Match: UPI0019CDFBA6 (2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase n=1 Tax=Bacteriovorax sp. TaxID=2608087 RepID=UPI0019CDFBA6)

HSP 1 Score: 202 bits (514), Expect = 1.460e-57
Identity = 110/264 (41.67%), Postives = 159/264 (60.23%), Query Frame = 1
Query:   19 DERAQSYHALGFMKATQKPAVLLCTSGTAVANFLPAIIEAEKTHLPLVVVSADRPSELNAADANQTINQIEVLRNYTKGFWNTSEPQETYPPSALAGKISFLLGQALQDPTGPVHINVPLREPLDHGPVDMKEDWVNEIKRIMRLEGPSLGIPQTTKRVANEDIEKLFEDIKNSQRPLLVFGPLSGTQDYDK-KKVKAFINEYKGSFSCDITSGLKYTFGSNEGLIPTLDHPEVLNQLEKSSPDLVVHFGHRLTSKHYYGFLKK 807
            DERA  Y ALG+ K+T  PAV++CTSGTA+AN++P++IEA+K++LPL+V+SADRP EL   D NQT++Q +   +Y +G  N   P  +  P AL   +S L+ ++L    GPVH N   REPL+   + + ED++      ++ +GP             ED+ ++ + +KNS+  LLV G L+    YD+ + V  FI         D++S LKY+F   +  +PT DHPEV + L K+ P  V H G RLTSKHYY FLK+
Sbjct:   61 DERAAGYRALGYAKSTGVPAVVVCTSGTAMANYMPSVIEAKKSNLPLIVLSADRPPELTFCDDNQTMDQTKFFGDYVQGEMNLGAPTLSISPLALTSSLSNLIHKSLFPQKGPVHFNCAFREPLEATIIPIPEDYLKLASDQVKYDGPCTRYMNLNTTPLQEDLVEIAQILKNSKTGLLVIGSLN---PYDETQSVVDFIKLLNWPTYFDVSSSLKYSFNLTDNALPTFDHPEVQDALIKNPPQTVFHIGGRLTSKHYYTFLKQ 321          
BLAST of mRNA_C-australica_Contig_10285.1.1 vs. uniprot
Match: UPI0019B17E92 (2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase n=2 Tax=Proteobacteria TaxID=1224 RepID=UPI0019B17E92)

HSP 1 Score: 201 bits (511), Expect = 4.080e-57
Identity = 109/263 (41.44%), Postives = 154/263 (58.56%), Query Frame = 1
Query:   19 DERAQSYHALGFMKATQKPAVLLCTSGTAVANFLPAIIEAEKTHLPLVVVSADRPSELNAADANQTINQIEVLRNYTKGFWNTSEPQETYPPSALAGKISFLLGQALQDPTGPVHINVPLREPLDHGPVDMKEDWVNEIKRIMRLEGPSLGIPQTTKRVANEDIEKLFEDIKNSQRPLLVFGPLSGTQDYDKKKVKAFINEYKGSFSCDITSGLKYTFGSNEGLIPTLDHPEVLNQLEKSSPDLVVHFGHRLTSKHYYGFLKK 807
            DER  SY ALG+ KAT  PAVL+CTSGTA+AN++PA++EA+K++LPL+++SADRP+EL   D NQTI+Q +   ++ +G      P     P A+   +S L+ ++L    GPVH N   REPL+   V +  D++N  K  +   GPS        R     I ++   +KNS+  LLV G L+  +  +   V+ F+         D++S LKY F  N+G +PT DHPE    L  + P+ V H G RLTSKHYY FLK+
Sbjct:   61 DERGASYRALGYSKATGNPAVLICTSGTAMANYMPAVVEAKKSNLPLIILSADRPAELTFCDDNQTIDQTKFFGDFIQGQMALGAPTVEISPLAMTSSLSNLIHKSLFPQKGPVHFNCAFREPLEDTIVPVPIDYLNLAKIQIERTGPSTRYVNLETRPDKNSINEIAALLKNSKTGLLVVGSLAPHESTEM--VEEFVKVLNWPTYFDVSSSLKYAFNLNDGALPTFDHPEFQLDLVNNPPETVFHIGGRLTSKHYYSFLKQ 321          
BLAST of mRNA_C-australica_Contig_10285.1.1 vs. uniprot
Match: A0A2E5JFW5_9PROT (2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase n=1 Tax=Halobacteriovorax sp. TaxID=2020862 RepID=A0A2E5JFW5_9PROT)

HSP 1 Score: 199 bits (507), Expect = 1.570e-56
Identity = 106/269 (39.41%), Postives = 160/269 (59.48%), Query Frame = 1
Query:    1 TIHEGFDERAQSYHALGFMKATQKPAVLLCTSGTAVANFLPAIIEAEKTHLPLVVVSADRPSELNAADANQTINQIEVLRNYTKGFWNTSEPQETYPPSALAGKISFLLGQALQDPTGPVHINVPLREPLDHGPVDMKEDWVNEIKRIMRLEGPSLGI-PQTTKRVANEDIEKLFEDIKNSQRPLLVFGPLSGTQ-DYDKKKVKAFINEYKGSFSCDITSGLKYTFGSNEGLIPTLDHPEVLNQLEKSSPDLVVHFGHRLTSKHYYGFL 801
             +H G DERA SY A G+ K + K  VL+CTSGTA ANF PA+IEA+K++ PL+V+SADRP EL+  DANQ+I+Q ++  N+ K F +   P E+    A+A  ++     AL+ P GPVHIN+  REPLD     +    ++  K +   + P+  +  Q T      DI  +   ++ ++ PL+V G L+ +  +  ++++   +       + D+TS LK+ F  N+GL+PT DHPEV      + PDL++H G RLTSKH+Y +L
Sbjct:   56 NLHVGMDERALSYQAYGYAKTSGKAGVLVCTSGTAAANFYPAVIEAKKSNTPLIVISADRPLELSQTDANQSIDQKQLYSNHIKHFLDLGTPCESVSTKAVARMMAHAYEVALRAPAGPVHINISFREPLDGKLQSIDSKVIDNAKNVFEAQSPARQLLGQNTL-----DISSIMPLLQKAKNPLVVVGELNLSDVNETREQLLQALKSCPFPLNVDVTSSLKFDFSLNDGLVPTFDHPEVYEYFHNNPPDLILHIGARLTSKHFYRYL 319          
BLAST of mRNA_C-australica_Contig_10285.1.1 vs. uniprot
Match: E1X1B1_HALMS (2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase n=3 Tax=Halobacteriovorax marinus TaxID=97084 RepID=E1X1B1_HALMS)

HSP 1 Score: 199 bits (505), Expect = 2.610e-56
Identity = 113/271 (41.70%), Postives = 158/271 (58.30%), Query Frame = 1
Query:    1 TIHEGFDERAQSYHALGFMKATQKPAVLLCTSGTAVANFLPAIIEAEKTHLPLVVVSADRPSELNAADANQTINQIEVLRNYTKGFWNTSEPQETYPPSALAGKISFLLGQALQDPTGPVHINVPLREPLDHGPVDMKEDWVNEIKRIMRLEGPSLGIPQTT--KRVANEDIEKLFEDIKNSQRPLLVFGPLSGTQDYDKKKVKAFINEYKGSFSCDITSGLKYTFGSNEGLIPTLDHPEVLNQLEKSSPDLVVHFGHRLTSKHYYGFLKK 807
            ++  G DERAQSY ALG  KAT K + L+CTSGTA+AN+ PAIIEA+K+  PL+V+SADRP EL  +DANQTINQ+    ++         P     P  +   +  L+ ++     GPVH+N+PLREP+D   V + ED+V   K   +    +   P T     +A E I K+   IK++ + LLV G L  +   DK+ +KAFI +       DI+S LKY +   + +IPT DH EV  Q+ +  P  ++H G R TSKHYY FL++
Sbjct:   50 SLFLGVDERAQSYRALGNAKATGKTSALICTSGTALANYTPAIIEAKKSATPLIVLSADRPIELATSDANQTINQVHFYGHHILADNCLGAPTTEICPQVIRNTVDHLIFRSRYPIKGPVHLNIPLREPIDMTEVHIDEDYVERAKSGFKKSFQTKYFPPTQGLSPLAKESIAKI---IKDNPKGLLVVGSLPCS--LDKEIIKAFIQKLNWPVFLDISSSLKYNYSIRDNIIPTFDHSEVYEQMSRVKPSAIIHLGGRTTSKHYYRFLEE 315          
BLAST of mRNA_C-australica_Contig_10285.1.1 vs. uniprot
Match: A0A2K9NS01_BACTC (2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase n=2 Tax=Bacteriovorax stolpii TaxID=960 RepID=A0A2K9NS01_BACTC)

HSP 1 Score: 199 bits (505), Expect = 3.060e-56
Identity = 105/263 (39.92%), Postives = 155/263 (58.94%), Query Frame = 1
Query:   19 DERAQSYHALGFMKATQKPAVLLCTSGTAVANFLPAIIEAEKTHLPLVVVSADRPSELNAADANQTINQIEVLRNYTKGFWNTSEPQETYPPSALAGKISFLLGQALQDPTGPVHINVPLREPLDHGPVDMKEDWVNEIKRIMRLEGPSLGIPQTTKRVANEDIEKLFEDIKNSQRPLLVFGPLSGTQDYDKKKVKAFINEYKGSFSCDITSGLKYTFGSNEGLIPTLDHPEVLNQLEKSSPDLVVHFGHRLTSKHYYGFLKK 807
            DERA ++ ALG+ KAT KP+VL+CTSGTA+AN++PA++EA+K++LPL+V+SADRP EL   D NQTI+Q +   +Y +G  N   P     P A+   +S L+ ++L    GPVH N   R+PL+    ++  +++      +  EGPS              I ++   +K S+  LLV G L+  +  +   V+ F+         D++S LKY F   +  +PT DHPEV ++L K+ P+ V H G RLTSKHYY FLK+
Sbjct:   61 DERAAAFRALGYSKATGKPSVLVCTSGTAMANYMPAVVEAKKSNLPLIVLSADRPIELTFCDDNQTIDQTKFYGDYVQGEMNFGAPSAEISPLAMTSSLSNLINKSLYPQKGPVHFNCAFRDPLEDTQTNIPAEYIKLANIQINREGPSTRYVNLETVPDKNAIAEISGILKKSKTGLLVIGSLAPHESTET--VREFVKTLNWPTYFDVSSSLKYAFNLTDDALPTFDHPEVQSELVKNPPETVFHIGGRLTSKHYYSFLKQ 321          
The following BLAST results are available for this feature:
BLAST of mRNA_C-australica_Contig_10285.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2E3XSH8_9PROT2.020e-10657.742-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1... [more]
A0A849T1T3_9PROT3.140e-6242.972-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1... [more]
A0A2H0Q5C7_9PROT5.600e-6242.542-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1... [more]
A0A1Y5F9U8_9PROT2.050e-6040.222-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1... [more]
T0SW58_9PROT1.200e-5839.412-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1... [more]
UPI0019CDFBA61.460e-5741.672-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1... [more]
UPI0019B17E924.080e-5741.442-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1... [more]
A0A2E5JFW5_9PROT1.570e-5639.412-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1... [more]
E1X1B1_HALMS2.610e-5641.702-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1... [more]
A0A2K9NS01_BACTC3.060e-5639.922-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-australica_Contig_10285contigC-australica_Contig_10285:2..808 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Chrysoparadoxa australica CS_1217 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog1353529.M899_1731
Preferred namemenD
PFAMsTPP_enzyme_C,TPP_enzyme_M_2,TPP_enzyme_N
Model size807
Max annot lvl213481|Bdellovibrionales
KEGG rclassRC02186
KEGG koko:K02551
KEGG ReactionR08165
KEGG Pathwayko00130,ko01100,ko01110,map00130,map01100,map01110
KEGG ModuleM00116
Hectar predicted targeting categoryother localisation
Exons1
Evalue1.96e-59
EggNOG OGsCOG1165@1|root,COG1165@2|Bacteria,1MVMZ@1224|Proteobacteria,42PNC@68525|delta/epsilon subdivisions,2MT3I@213481|Bdellovibrionales,2WKSZ@28221|Deltaproteobacteria
EC2.2.1.9
DescriptionCatalyzes the thiamine diphosphate-dependent decarboxylation of 2-oxoglutarate and the subsequent addition of the resulting succinic semialdehyde-thiamine pyrophosphate anion to isochorismate to yield 2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylate (SEPHCHC)
Cds size807
COG categoryH
BRITEko00000,ko00001,ko00002,ko01000
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1682586764.6761801-CDS-C-australica_Contig_10285:1..8081682586764.6761801-CDS-C-australica_Contig_10285:1..808Chrysoparadoxa australica CS_1217CDSC-australica_Contig_10285 2..808 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_C-australica_Contig_10285.1.1prot_C-australica_Contig_10285.1.1Chrysoparadoxa australica CS_1217polypeptideC-australica_Contig_10285 2..808 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_C-australica_Contig_10285.1.1

>prot_C-australica_Contig_10285.1.1 ID=prot_C-australica_Contig_10285.1.1|Name=mRNA_C-australica_Contig_10285.1.1|organism=Chrysoparadoxa australica CS_1217|type=polypeptide|length=269bp
TIHEGFDERAQSYHALGFMKATQKPAVLLCTSGTAVANFLPAIIEAEKTH
LPLVVVSADRPSELNAADANQTINQIEVLRNYTKGFWNTSEPQETYPPSA
LAGKISFLLGQALQDPTGPVHINVPLREPLDHGPVDMKEDWVNEIKRIMR
LEGPSLGIPQTTKRVANEDIEKLFEDIKNSQRPLLVFGPLSGTQDYDKKK
VKAFINEYKGSFSCDITSGLKYTFGSNEGLIPTLDHPEVLNQLEKSSPDL
VVHFGHRLTSKHYYGFLKK
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mRNA from alignment at C-australica_Contig_10285:2..808+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_C-australica_Contig_10285.1.1 ID=mRNA_C-australica_Contig_10285.1.1|Name=mRNA_C-australica_Contig_10285.1.1|organism=Chrysoparadoxa australica CS_1217|type=mRNA|length=807bp|location=Sequence derived from alignment at C-australica_Contig_10285:2..808+ (Chrysoparadoxa australica CS_1217)
ACAATTCACGAGGGTTTTGATGAAAGGGCCCAGTCCTATCATGCTTTAGG ATTTATGAAAGCGACTCAGAAACCAGCAGTCCTCCTTTGTACAAGTGGAA CTGCGGTCGCAAATTTTCTTCCGGCGATAATTGAAGCTGAAAAAACTCAC CTACCTCTTGTTGTTGTAAGTGCAGATAGACCAAGCGAACTCAATGCAGC TGATGCGAACCAAACCATAAACCAAATAGAAGTTTTAAGAAATTATACGA AAGGGTTTTGGAATACCTCGGAACCACAAGAGACATATCCCCCATCAGCA CTAGCAGGGAAAATCTCTTTTCTTCTCGGTCAAGCATTACAGGATCCAAC TGGTCCCGTTCATATTAATGTCCCTCTAAGAGAACCACTTGACCATGGTC CGGTCGATATGAAGGAAGATTGGGTTAACGAAATTAAAAGAATCATGAGG CTTGAAGGTCCAAGCTTAGGAATTCCTCAAACAACAAAACGTGTAGCAAA CGAAGATATTGAAAAACTTTTTGAGGATATAAAAAATAGCCAACGCCCTC TTCTTGTCTTTGGTCCTCTTAGTGGTACCCAGGATTACGATAAGAAGAAA GTAAAAGCTTTTATCAATGAGTATAAAGGGTCATTTAGTTGCGACATTAC GAGTGGACTCAAATACACTTTTGGTTCCAATGAAGGTCTTATACCAACAC TTGATCATCCTGAAGTCCTCAATCAACTTGAAAAAAGTTCTCCAGATCTC GTCGTCCATTTTGGCCACAGGTTAACGAGTAAACATTATTACGGATTCTT AAAAAAA
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Coding sequence (CDS) from alignment at C-australica_Contig_10285:2..808+

>mRNA_C-australica_Contig_10285.1.1 ID=mRNA_C-australica_Contig_10285.1.1|Name=mRNA_C-australica_Contig_10285.1.1|organism=Chrysoparadoxa australica CS_1217|type=CDS|length=807bp|location=Sequence derived from alignment at C-australica_Contig_10285:2..808+ (Chrysoparadoxa australica CS_1217)
ACAATTCACGAGGGTTTTGATGAAAGGGCCCAGTCCTATCATGCTTTAGG
ATTTATGAAAGCGACTCAGAAACCAGCAGTCCTCCTTTGTACAAGTGGAA
CTGCGGTCGCAAATTTTCTTCCGGCGATAATTGAAGCTGAAAAAACTCAC
CTACCTCTTGTTGTTGTAAGTGCAGATAGACCAAGCGAACTCAATGCAGC
TGATGCGAACCAAACCATAAACCAAATAGAAGTTTTAAGAAATTATACGA
AAGGGTTTTGGAATACCTCGGAACCACAAGAGACATATCCCCCATCAGCA
CTAGCAGGGAAAATCTCTTTTCTTCTCGGTCAAGCATTACAGGATCCAAC
TGGTCCCGTTCATATTAATGTCCCTCTAAGAGAACCACTTGACCATGGTC
CGGTCGATATGAAGGAAGATTGGGTTAACGAAATTAAAAGAATCATGAGG
CTTGAAGGTCCAAGCTTAGGAATTCCTCAAACAACAAAACGTGTAGCAAA
CGAAGATATTGAAAAACTTTTTGAGGATATAAAAAATAGCCAACGCCCTC
TTCTTGTCTTTGGTCCTCTTAGTGGTACCCAGGATTACGATAAGAAGAAA
GTAAAAGCTTTTATCAATGAGTATAAAGGGTCATTTAGTTGCGACATTAC
GAGTGGACTCAAATACACTTTTGGTTCCAATGAAGGTCTTATACCAACAC
TTGATCATCCTGAAGTCCTCAATCAACTTGAAAAAAGTTCTCCAGATCTC
GTCGTCCATTTTGGCCACAGGTTAACGAGTAAACATTATTACGGATTCTT
AAAAAAA
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