mRNA_C-australica_Contig_10285.1.1 (mRNA) Chrysoparadoxa australica CS_1217
You are viewing an mRNA, more information available on the corresponding polypeptide page
Overview
Homology
BLAST of mRNA_C-australica_Contig_10285.1.1 vs. uniprot
Match: A0A2E3XSH8_9PROT (2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase n=1 Tax=Halobacteriovoraceae bacterium TaxID=2026745 RepID=A0A2E3XSH8_9PROT) HSP 1 Score: 330 bits (845), Expect = 2.020e-106 Identity = 153/265 (57.74%), Postives = 202/265 (76.23%), Query Frame = 1 Query: 13 GFDERAQSYHALGFMKATQKPAVLLCTSGTAVANFLPAIIEAEKTHLPLVVVSADRPSELNAADANQTINQIEVLRNYTKGFWNTSEPQETYPPSALAGKISFLLGQALQDPTGPVHINVPLREPLDHGPVDMKEDWVNEIKRIMRLEGPSLGIPQTTKRVANEDIEKLFEDIKNSQRPLLVFGPLSGTQDYDKKKVKAFINEYKGSFSCDITSGLKYTFGSNEGLIPTLDHPEVLNQLEKSSPDLVVHFGHRLTSKHYYGFLKK 807 GFDERAQS+ ALGF++ + A L+CTSGTAVANFLPA+IEAEK+ +PL+V+SADRP ELNA DANQTI+Q EVLR+Y K +W SEPQ +PP AL+GK+S L L P GP+HIN+PLREPLDH PV M + W +EI I++ E SL KR+ ++ +L++ ++NSQRP ++FGP+ ++ + F+ YKGSFSCD+T+GLKY +GS +GLIPTLDHPEVL +LE+++PDL++HFGHRLTSKHYY FL++ Sbjct: 62 GFDERAQSFRALGFIRTHSQAAALVCTSGTAVANFLPAVIEAEKSRIPLIVLSADRPGELNAIDANQTIDQTEVLRDYCKHYWMCSEPQSDFPPRALSGKLSQLTHSTLSSPKGPMHINIPLREPLDHSPVAMDQKWKDEIFHILKKERASLENALLEKRIPKAELSELYQALENSQRPFIIFGPMDEEASLWEEDLGEFLESYKGSFSCDVTTGLKYKYGSEKGLIPTLDHPEVLAELERTNPDLIIHFGHRLTSKHYYKFLER 326
BLAST of mRNA_C-australica_Contig_10285.1.1 vs. uniprot
Match: A0A849T1T3_9PROT (2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase n=1 Tax=Bacteriovoracaceae bacterium TaxID=2081706 RepID=A0A849T1T3_9PROT) HSP 1 Score: 214 bits (546), Expect = 3.140e-62 Identity = 113/263 (42.97%), Postives = 161/263 (61.22%), Query Frame = 1 Query: 19 DERAQSYHALGFMKATQKPAVLLCTSGTAVANFLPAIIEAEKTHLPLVVVSADRPSELNAADANQTINQIEVLRNYTKGFWNTSEPQETYPPSALAGKISFLLGQALQDPTGPVHINVPLREPLDHGPVDMKEDWVNEIKRIMRLEGPSLGIPQTTKRVANEDIEKLFEDIKNSQRPLLVFGPLSGTQDYDKKKVKAFINEYKGSFSCDITSGLKYTFGSNEGLIPTLDHPEVLNQLEKSSPDLVVHFGHRLTSKHYYGFLKK 807 DER +Y A+GF KAT KPAV++CTSGTA+AN++PAI+EA+K++LPL+++SADRP EL D NQTI+Q + ++ +G N P E P AL +S L+ ++L GPVH N REPL+ V +KED++ + + +GPS + + ++++ E I NS+ LLV G L+ + D ++ FI D++S LKY F +G +PT DHPE + L K+ P+ V H G RLTSKHYY FLKK Sbjct: 62 DERGAAYRAIGFTKATGKPAVIVCTSGTAMANYMPAIVEAKKSNLPLIILSADRPPELTFCDDNQTIDQTKFFGDFIQGEMNLGAPSEEISPLALTSSLSNLIHKSLFPQKGPVHFNCAFREPLEDTKVFVKEDYIELARNQINRKGPSTKYIELETSPNLDALKEVAEQILNSKSGLLVIGSLAPYESLDT--LREFIKTLNWPTYYDVSSSLKYEFNLEDGALPTFDHPEFQDMLIKNPPETVFHIGGRLTSKHYYSFLKK 322
BLAST of mRNA_C-australica_Contig_10285.1.1 vs. uniprot
Match: A0A2H0Q5C7_9PROT (2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase n=1 Tax=Bdellovibrionales bacterium CG11_big_fil_rev_8_21_14_0_20_38_13 TaxID=1973928 RepID=A0A2H0Q5C7_9PROT) HSP 1 Score: 214 bits (544), Expect = 5.600e-62 Identity = 114/268 (42.54%), Postives = 161/268 (60.07%), Query Frame = 1 Query: 4 IHEGFDERAQSYHALGFMKATQKPAVLLCTSGTAVANFLPAIIEAEKTHLPLVVVSADRPSELNAADANQTINQIEVLRNYTKGFWNTSEPQETYPPSALAGKISFLLGQALQDPTGPVHINVPLREPLDHGPVDMKEDWVNEIKRIMRLEGPSLGIPQTTKRVANEDIEKLFEDIKNSQRPLLVFGPLSGTQDYD-KKKVKAFINEYKGSFSCDITSGLKYTFGSNEGLIPTLDHPEVLNQLEKSSPDLVVHFGHRLTSKHYYGFLK 804 +H G DER SY ALG+ K + KPA+L+CTSGTA ANF PA+IEA K+ +PL+V+SADRP EL+ +DANQ+INQ + + K F + P + A+A +F A++ P GPVHIN+ REPLD ++ ++ + K I+ E PS + +DI + ++ S++PL+V G LS D + ++ + + D+TS LK+ F +GLIPT DHPEV ++ PDLV+H G RLTSKHYY FLK Sbjct: 53 LHVGMDERGLSYQALGYAKTSGKPAILVCTSGTAAANFYPAVIEASKSQVPLIVLSADRPLELSQSDANQSINQKNLYGQHCKHFLDLGSPNDDMNLKAIARMTAFAWEMAIKRPFGPVHINIAFREPLDGKETNLDSKYIQDAKTIVDQESPSRQLLGHLL----QDISPILPFLQKSKKPLIVVGELSLCDVKDARSELIESLRSCPYPLNVDVTSSLKFDFSLEDGLIPTFDHPEVYEYFHQNPPDLVLHIGGRLTSKHYYRFLK 316
BLAST of mRNA_C-australica_Contig_10285.1.1 vs. uniprot
Match: A0A1Y5F9U8_9PROT (2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase n=1 Tax=Halobacteriovorax marinus TaxID=97084 RepID=A0A1Y5F9U8_9PROT) HSP 1 Score: 209 bits (533), Expect = 2.050e-60 Identity = 109/271 (40.22%), Postives = 169/271 (62.36%), Query Frame = 1 Query: 1 TIHEGFDERAQSYHALGFMKATQKPAVLLCTSGTAVANFLPAIIEAEKTHLPLVVVSADRPSELNAADANQTINQIEVLRNYTKGFWNTSEPQETYPPSALAGKISFLLGQALQDPTGPVHINVPLREPLDHGPVDMKEDWVNEIKRIMR--LEGPSLGIPQTTKRVANEDIEKLFEDIKNSQRPLLVFGPLSGTQDYDKKKVKAFINEYKGSFSCDITSGLKYTFGSNEGLIPTLDHPEVLNQLEKSSPDLVVHFGHRLTSKHYYGFLKK 807 ++ G DERAQ+Y ALG K T + + L+CTSGTA+AN++PAIIEA+K+ +P+VV+SADRP EL+ +DANQTINQ+ + + P E P + ++ L+ ++L GPVH+N+PLREPLD + E ++ + + L+ L Q+ +++E ++K+ + +K+S+R LLV G L + D K K+KAFI + DI+S LKY++ + +IPT DH EV +++ ++ P ++H G R TSKHYY FL + Sbjct: 49 NLYLGIDERAQAYRALGNAKGTGRTSALICTSGTALANYMPAIIEAKKSFIPMVVLSADRPIELSTSDANQTINQVHFYGAHVRADACLGAPTEQIEPHIVRNTVNHLIFRSLYPTKGPVHLNIPLREPLDSTKAPISESYIERARETFKILLQTEYLAPLQS---LSSEVVDKISDIVKHSERGLLVIGQLPSSMD--KSKIKAFIKKLNWPVFLDISSSLKYSYSLEDNVIPTFDHQEVYDKVLENIPSTIIHLGGRTTSKHYYRFLSE 314
BLAST of mRNA_C-australica_Contig_10285.1.1 vs. uniprot
Match: T0SW58_9PROT (2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase n=1 Tax=Bacteriovorax sp. BSW11_IV TaxID=1353529 RepID=T0SW58_9PROT) HSP 1 Score: 205 bits (521), Expect = 1.200e-58 Identity = 106/269 (39.41%), Postives = 154/269 (57.25%), Query Frame = 1 Query: 1 TIHEGFDERAQSYHALGFMKATQKPAVLLCTSGTAVANFLPAIIEAEKTHLPLVVVSADRPSELNAADANQTINQIEVLRNYTKGFWNTSEPQETYPPSALAGKISFLLGQALQDPTGPVHINVPLREPLDHGPVDMKEDWVNEIKRIMRLEGPSLGIPQTTKRVANEDIEKLFEDIKNSQRPLLVFGPLSGTQDYDKKKVKAFINEYKGSFSCDITSGLKYTFGSNEGLIPTLDHPEVLNQLEKSSPDLVVHFGHRLTSKHYYGFLKK 807 T+ EG DERA SY ALG KA KP L+CTSGTA+AN++PA+IEA ++++PLV++S+DRP EL +DANQTINQ + ++ G N + P E + +LA IS LL GPVHIN P REPLD+ + + + E KR GP+ + E + L +++RP +V G T + + + F+ D++S +KY F +P++DHPEV +++ PD++ HFG RLT KHYY +L + Sbjct: 50 TLIEGMDERAASYRALGAAKALGKPVALVCTSGTAMANYMPAVIEARRSNIPLVIISSDRPKELAISDANQTINQENLYGDFVTGSLNLNAPNEHFGLKSLATSISHLLKSTWFPEKGPVHINAPFREPLDNKTAPIADKMIEEAKRYFTQRGPATNYNSVVIAPSTEVLADLANTFNSAKRPFVVVGK---TLENEIDAITEFLQYTNAWTFIDVSSSIKYHFPLRRQAVPSMDHPEVYEYFKQNPPDVIFHFGGRLTGKHYYRYLSE 315
BLAST of mRNA_C-australica_Contig_10285.1.1 vs. uniprot
Match: UPI0019CDFBA6 (2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase n=1 Tax=Bacteriovorax sp. TaxID=2608087 RepID=UPI0019CDFBA6) HSP 1 Score: 202 bits (514), Expect = 1.460e-57 Identity = 110/264 (41.67%), Postives = 159/264 (60.23%), Query Frame = 1 Query: 19 DERAQSYHALGFMKATQKPAVLLCTSGTAVANFLPAIIEAEKTHLPLVVVSADRPSELNAADANQTINQIEVLRNYTKGFWNTSEPQETYPPSALAGKISFLLGQALQDPTGPVHINVPLREPLDHGPVDMKEDWVNEIKRIMRLEGPSLGIPQTTKRVANEDIEKLFEDIKNSQRPLLVFGPLSGTQDYDK-KKVKAFINEYKGSFSCDITSGLKYTFGSNEGLIPTLDHPEVLNQLEKSSPDLVVHFGHRLTSKHYYGFLKK 807 DERA Y ALG+ K+T PAV++CTSGTA+AN++P++IEA+K++LPL+V+SADRP EL D NQT++Q + +Y +G N P + P AL +S L+ ++L GPVH N REPL+ + + ED++ ++ +GP ED+ ++ + +KNS+ LLV G L+ YD+ + V FI D++S LKY+F + +PT DHPEV + L K+ P V H G RLTSKHYY FLK+ Sbjct: 61 DERAAGYRALGYAKSTGVPAVVVCTSGTAMANYMPSVIEAKKSNLPLIVLSADRPPELTFCDDNQTMDQTKFFGDYVQGEMNLGAPTLSISPLALTSSLSNLIHKSLFPQKGPVHFNCAFREPLEATIIPIPEDYLKLASDQVKYDGPCTRYMNLNTTPLQEDLVEIAQILKNSKTGLLVIGSLN---PYDETQSVVDFIKLLNWPTYFDVSSSLKYSFNLTDNALPTFDHPEVQDALIKNPPQTVFHIGGRLTSKHYYTFLKQ 321
BLAST of mRNA_C-australica_Contig_10285.1.1 vs. uniprot
Match: UPI0019B17E92 (2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase n=2 Tax=Proteobacteria TaxID=1224 RepID=UPI0019B17E92) HSP 1 Score: 201 bits (511), Expect = 4.080e-57 Identity = 109/263 (41.44%), Postives = 154/263 (58.56%), Query Frame = 1 Query: 19 DERAQSYHALGFMKATQKPAVLLCTSGTAVANFLPAIIEAEKTHLPLVVVSADRPSELNAADANQTINQIEVLRNYTKGFWNTSEPQETYPPSALAGKISFLLGQALQDPTGPVHINVPLREPLDHGPVDMKEDWVNEIKRIMRLEGPSLGIPQTTKRVANEDIEKLFEDIKNSQRPLLVFGPLSGTQDYDKKKVKAFINEYKGSFSCDITSGLKYTFGSNEGLIPTLDHPEVLNQLEKSSPDLVVHFGHRLTSKHYYGFLKK 807 DER SY ALG+ KAT PAVL+CTSGTA+AN++PA++EA+K++LPL+++SADRP+EL D NQTI+Q + ++ +G P P A+ +S L+ ++L GPVH N REPL+ V + D++N K + GPS R I ++ +KNS+ LLV G L+ + + V+ F+ D++S LKY F N+G +PT DHPE L + P+ V H G RLTSKHYY FLK+ Sbjct: 61 DERGASYRALGYSKATGNPAVLICTSGTAMANYMPAVVEAKKSNLPLIILSADRPAELTFCDDNQTIDQTKFFGDFIQGQMALGAPTVEISPLAMTSSLSNLIHKSLFPQKGPVHFNCAFREPLEDTIVPVPIDYLNLAKIQIERTGPSTRYVNLETRPDKNSINEIAALLKNSKTGLLVVGSLAPHESTEM--VEEFVKVLNWPTYFDVSSSLKYAFNLNDGALPTFDHPEFQLDLVNNPPETVFHIGGRLTSKHYYSFLKQ 321
BLAST of mRNA_C-australica_Contig_10285.1.1 vs. uniprot
Match: A0A2E5JFW5_9PROT (2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase n=1 Tax=Halobacteriovorax sp. TaxID=2020862 RepID=A0A2E5JFW5_9PROT) HSP 1 Score: 199 bits (507), Expect = 1.570e-56 Identity = 106/269 (39.41%), Postives = 160/269 (59.48%), Query Frame = 1 Query: 1 TIHEGFDERAQSYHALGFMKATQKPAVLLCTSGTAVANFLPAIIEAEKTHLPLVVVSADRPSELNAADANQTINQIEVLRNYTKGFWNTSEPQETYPPSALAGKISFLLGQALQDPTGPVHINVPLREPLDHGPVDMKEDWVNEIKRIMRLEGPSLGI-PQTTKRVANEDIEKLFEDIKNSQRPLLVFGPLSGTQ-DYDKKKVKAFINEYKGSFSCDITSGLKYTFGSNEGLIPTLDHPEVLNQLEKSSPDLVVHFGHRLTSKHYYGFL 801 +H G DERA SY A G+ K + K VL+CTSGTA ANF PA+IEA+K++ PL+V+SADRP EL+ DANQ+I+Q ++ N+ K F + P E+ A+A ++ AL+ P GPVHIN+ REPLD + ++ K + + P+ + Q T DI + ++ ++ PL+V G L+ + + ++++ + + D+TS LK+ F N+GL+PT DHPEV + PDL++H G RLTSKH+Y +L Sbjct: 56 NLHVGMDERALSYQAYGYAKTSGKAGVLVCTSGTAAANFYPAVIEAKKSNTPLIVISADRPLELSQTDANQSIDQKQLYSNHIKHFLDLGTPCESVSTKAVARMMAHAYEVALRAPAGPVHINISFREPLDGKLQSIDSKVIDNAKNVFEAQSPARQLLGQNTL-----DISSIMPLLQKAKNPLVVVGELNLSDVNETREQLLQALKSCPFPLNVDVTSSLKFDFSLNDGLVPTFDHPEVYEYFHNNPPDLILHIGARLTSKHFYRYL 319
BLAST of mRNA_C-australica_Contig_10285.1.1 vs. uniprot
Match: E1X1B1_HALMS (2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase n=3 Tax=Halobacteriovorax marinus TaxID=97084 RepID=E1X1B1_HALMS) HSP 1 Score: 199 bits (505), Expect = 2.610e-56 Identity = 113/271 (41.70%), Postives = 158/271 (58.30%), Query Frame = 1 Query: 1 TIHEGFDERAQSYHALGFMKATQKPAVLLCTSGTAVANFLPAIIEAEKTHLPLVVVSADRPSELNAADANQTINQIEVLRNYTKGFWNTSEPQETYPPSALAGKISFLLGQALQDPTGPVHINVPLREPLDHGPVDMKEDWVNEIKRIMRLEGPSLGIPQTT--KRVANEDIEKLFEDIKNSQRPLLVFGPLSGTQDYDKKKVKAFINEYKGSFSCDITSGLKYTFGSNEGLIPTLDHPEVLNQLEKSSPDLVVHFGHRLTSKHYYGFLKK 807 ++ G DERAQSY ALG KAT K + L+CTSGTA+AN+ PAIIEA+K+ PL+V+SADRP EL +DANQTINQ+ ++ P P + + L+ ++ GPVH+N+PLREP+D V + ED+V K + + P T +A E I K+ IK++ + LLV G L + DK+ +KAFI + DI+S LKY + + +IPT DH EV Q+ + P ++H G R TSKHYY FL++ Sbjct: 50 SLFLGVDERAQSYRALGNAKATGKTSALICTSGTALANYTPAIIEAKKSATPLIVLSADRPIELATSDANQTINQVHFYGHHILADNCLGAPTTEICPQVIRNTVDHLIFRSRYPIKGPVHLNIPLREPIDMTEVHIDEDYVERAKSGFKKSFQTKYFPPTQGLSPLAKESIAKI---IKDNPKGLLVVGSLPCS--LDKEIIKAFIQKLNWPVFLDISSSLKYNYSIRDNIIPTFDHSEVYEQMSRVKPSAIIHLGGRTTSKHYYRFLEE 315
BLAST of mRNA_C-australica_Contig_10285.1.1 vs. uniprot
Match: A0A2K9NS01_BACTC (2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase n=2 Tax=Bacteriovorax stolpii TaxID=960 RepID=A0A2K9NS01_BACTC) HSP 1 Score: 199 bits (505), Expect = 3.060e-56 Identity = 105/263 (39.92%), Postives = 155/263 (58.94%), Query Frame = 1 Query: 19 DERAQSYHALGFMKATQKPAVLLCTSGTAVANFLPAIIEAEKTHLPLVVVSADRPSELNAADANQTINQIEVLRNYTKGFWNTSEPQETYPPSALAGKISFLLGQALQDPTGPVHINVPLREPLDHGPVDMKEDWVNEIKRIMRLEGPSLGIPQTTKRVANEDIEKLFEDIKNSQRPLLVFGPLSGTQDYDKKKVKAFINEYKGSFSCDITSGLKYTFGSNEGLIPTLDHPEVLNQLEKSSPDLVVHFGHRLTSKHYYGFLKK 807 DERA ++ ALG+ KAT KP+VL+CTSGTA+AN++PA++EA+K++LPL+V+SADRP EL D NQTI+Q + +Y +G N P P A+ +S L+ ++L GPVH N R+PL+ ++ +++ + EGPS I ++ +K S+ LLV G L+ + + V+ F+ D++S LKY F + +PT DHPEV ++L K+ P+ V H G RLTSKHYY FLK+ Sbjct: 61 DERAAAFRALGYSKATGKPSVLVCTSGTAMANYMPAVVEAKKSNLPLIVLSADRPIELTFCDDNQTIDQTKFYGDYVQGEMNFGAPSAEISPLAMTSSLSNLINKSLYPQKGPVHFNCAFRDPLEDTQTNIPAEYIKLANIQINREGPSTRYVNLETVPDKNAIAEISGILKKSKTGLLVIGSLAPHESTET--VREFVKTLNWPTYFDVSSSLKYAFNLTDDALPTFDHPEVQSELVKNPPETVFHIGGRLTSKHYYSFLKQ 321 The following BLAST results are available for this feature:
BLAST of mRNA_C-australica_Contig_10285.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-australica_Contig_10285.1.1 >prot_C-australica_Contig_10285.1.1 ID=prot_C-australica_Contig_10285.1.1|Name=mRNA_C-australica_Contig_10285.1.1|organism=Chrysoparadoxa australica CS_1217|type=polypeptide|length=269bp TIHEGFDERAQSYHALGFMKATQKPAVLLCTSGTAVANFLPAIIEAEKTHback to top mRNA from alignment at C-australica_Contig_10285:2..808+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-australica_Contig_10285.1.1 ID=mRNA_C-australica_Contig_10285.1.1|Name=mRNA_C-australica_Contig_10285.1.1|organism=Chrysoparadoxa australica CS_1217|type=mRNA|length=807bp|location=Sequence derived from alignment at C-australica_Contig_10285:2..808+ (Chrysoparadoxa australica CS_1217)back to top Coding sequence (CDS) from alignment at C-australica_Contig_10285:2..808+ >mRNA_C-australica_Contig_10285.1.1 ID=mRNA_C-australica_Contig_10285.1.1|Name=mRNA_C-australica_Contig_10285.1.1|organism=Chrysoparadoxa australica CS_1217|type=CDS|length=807bp|location=Sequence derived from alignment at C-australica_Contig_10285:2..808+ (Chrysoparadoxa australica CS_1217)back to top |